2024-12-05 15:37:32,386 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 15:37:32,704 Running on GPU
2024-12-05 15:37:36,608 Found 6 citations for tools or databases
2024-12-05 15:37:36,608 Query 1/1: E4F1_RPL36AL (length 890)
2024-12-05 15:37:36,891 Sleeping for 6s. Reason: PENDING
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2024-12-05 15:38:54,378 Sleeping for 7s. Reason: RUNNING
2024-12-05 15:39:01,642 Sleeping for 6s. Reason: RUNNING
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2024-12-05 15:39:23,417 Sleeping for 9s. Reason: RUNNING
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2024-12-05 15:39:40,937 Sleeping for 6s. Reason: RUNNING
2024-12-05 15:39:47,189 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:39:58,285 Sleeping for 6s. Reason: PENDING
2024-12-05 15:40:04,547 Sleeping for 8s. Reason: RUNNING
2024-12-05 15:40:12,803 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:40:23,064 Sleeping for 6s. Reason: RUNNING
2024-12-05 15:40:29,321 Sleeping for 5s. Reason: RUNNING
2024-12-05 15:40:34,582 Sleeping for 6s. Reason: RUNNING
2024-12-05 15:40:40,839 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:40:50,095 Sleeping for 6s. Reason: RUNNING
2024-12-05 15:40:56,350 Sleeping for 8s. Reason: RUNNING
2024-12-05 15:41:04,611 Sleeping for 5s. Reason: RUNNING
2024-12-05 15:41:09,866 Sleeping for 5s. Reason: RUNNING
2024-12-05 15:41:15,131 Sleeping for 7s. Reason: RUNNING
2024-12-05 15:41:22,395 Sleeping for 5s. Reason: RUNNING
2024-12-05 15:41:27,648 Sleeping for 8s. Reason: RUNNING
2024-12-05 15:41:35,906 Sleeping for 6s. Reason: RUNNING
2024-12-05 15:41:42,160 Sleeping for 8s. Reason: RUNNING
2024-12-05 15:41:52,322 Setting max_seq=508, max_extra_seq=2048
2024-12-05 15:44:38,141 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=43.8 pTM=0.243 ipTM=0.182
2024-12-05 15:44:54,606 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=44.9 pTM=0.242 ipTM=0.182 tol=10.3
2024-12-05 15:45:11,131 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=44.9 pTM=0.236 ipTM=0.179 tol=6.5
2024-12-05 15:45:27,700 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=45.4 pTM=0.235 ipTM=0.177 tol=3.77
2024-12-05 15:45:44,297 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.9 pTM=0.232 ipTM=0.175 tol=3.03
2024-12-05 15:46:00,915 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=45 pTM=0.231 ipTM=0.174 tol=3.91
2024-12-05 15:46:17,514 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=44.7 pTM=0.23 ipTM=0.175 tol=4.92
2024-12-05 15:46:34,158 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=45.1 pTM=0.23 ipTM=0.174 tol=5.35
2024-12-05 15:46:50,835 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44.8 pTM=0.23 ipTM=0.176 tol=5.88
2024-12-05 15:47:07,503 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=44.2 pTM=0.231 ipTM=0.177 tol=3.12
2024-12-05 15:47:24,176 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=45.2 pTM=0.232 ipTM=0.178 tol=2.63
2024-12-05 15:47:40,852 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=44.8 pTM=0.23 ipTM=0.177 tol=2.68
2024-12-05 15:47:57,538 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=45 pTM=0.233 ipTM=0.177 tol=2.91
2024-12-05 15:48:14,230 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=44.9 pTM=0.233 ipTM=0.176 tol=3.5
2024-12-05 15:48:30,894 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=44.8 pTM=0.23 ipTM=0.174 tol=4.3
2024-12-05 15:48:47,559 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=44.5 pTM=0.232 ipTM=0.178 tol=3.66
2024-12-05 15:49:04,217 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=44.6 pTM=0.232 ipTM=0.174 tol=3.08
2024-12-05 15:49:20,869 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=44.4 pTM=0.233 ipTM=0.172 tol=6.07
2024-12-05 15:49:37,560 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=44.4 pTM=0.234 ipTM=0.173 tol=3.55
2024-12-05 15:49:54,226 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=44.6 pTM=0.233 ipTM=0.171 tol=2.31
2024-12-05 15:50:10,876 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=44.1 pTM=0.231 ipTM=0.172 tol=2.73
2024-12-05 15:50:27,535 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=44.6 pTM=0.231 ipTM=0.172 tol=3.18
2024-12-05 15:50:44,232 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=44.9 pTM=0.231 ipTM=0.173 tol=2.9
2024-12-05 15:51:00,910 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=44.4 pTM=0.232 ipTM=0.173 tol=1.58
2024-12-05 15:51:17,567 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=44.9 pTM=0.233 ipTM=0.174 tol=3.82
2024-12-05 15:51:34,235 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=44.3 pTM=0.231 ipTM=0.172 tol=3.91
2024-12-05 15:51:50,908 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=44.8 pTM=0.231 ipTM=0.171 tol=2.22
2024-12-05 15:52:07,578 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=44.5 pTM=0.23 ipTM=0.171 tol=1.49
2024-12-05 15:52:24,259 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=44.4 pTM=0.231 ipTM=0.172 tol=1.64
2024-12-05 15:52:40,943 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=44 pTM=0.231 ipTM=0.174 tol=2.88
2024-12-05 15:52:57,612 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=44 pTM=0.231 ipTM=0.173 tol=3.17
2024-12-05 15:52:57,613 alphafold2_multimer_v3_model_1_seed_000 took 656.8s (30 recycles)
2024-12-05 15:53:14,795 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43.7 pTM=0.233 ipTM=0.177
2024-12-05 15:53:31,527 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.5 pTM=0.238 ipTM=0.177 tol=11.2
2024-12-05 15:53:48,262 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.6 pTM=0.236 ipTM=0.177 tol=9.11
2024-12-05 15:54:05,000 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45 pTM=0.234 ipTM=0.182 tol=6.14
2024-12-05 15:54:21,755 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=44.7 pTM=0.233 ipTM=0.181 tol=6.14
2024-12-05 15:54:38,480 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=44.6 pTM=0.232 ipTM=0.176 tol=7.05
2024-12-05 15:54:55,255 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=44.1 pTM=0.232 ipTM=0.179 tol=3.94
2024-12-05 15:55:12,018 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=44.8 pTM=0.23 ipTM=0.176 tol=3.85
2024-12-05 15:55:28,778 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=45 pTM=0.229 ipTM=0.178 tol=3.37
2024-12-05 15:55:45,535 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.2 pTM=0.231 ipTM=0.179 tol=3.49
2024-12-05 15:56:02,296 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=45.2 pTM=0.231 ipTM=0.175 tol=2.81
2024-12-05 15:56:19,037 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=44.5 pTM=0.23 ipTM=0.175 tol=2.64
2024-12-05 15:56:35,793 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=45.5 pTM=0.23 ipTM=0.174 tol=3.5
2024-12-05 15:56:52,544 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=45.3 pTM=0.23 ipTM=0.176 tol=1.65
2024-12-05 15:57:09,286 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=44.9 pTM=0.227 ipTM=0.174 tol=3.21
2024-12-05 15:57:26,041 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=44.6 pTM=0.229 ipTM=0.18 tol=3.14
2024-12-05 15:57:42,796 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=45.3 pTM=0.228 ipTM=0.177 tol=1.91
2024-12-05 15:57:59,528 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=44.4 pTM=0.229 ipTM=0.177 tol=3.04
2024-12-05 15:58:16,285 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=44.5 pTM=0.229 ipTM=0.177 tol=2.2
2024-12-05 15:58:33,041 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=45 pTM=0.228 ipTM=0.175 tol=2.66
2024-12-05 15:58:49,757 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=44.2 pTM=0.231 ipTM=0.178 tol=3.38
2024-12-05 15:59:06,482 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=44.6 pTM=0.229 ipTM=0.17 tol=3
2024-12-05 15:59:23,212 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=45.2 pTM=0.23 ipTM=0.174 tol=2.64
2024-12-05 15:59:40,002 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=44.8 pTM=0.23 ipTM=0.176 tol=2.12
2024-12-05 15:59:56,781 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=45.2 pTM=0.232 ipTM=0.179 tol=2.82
2024-12-05 16:00:13,553 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44.6 pTM=0.233 ipTM=0.183 tol=3.21
2024-12-05 16:00:30,381 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=44.9 pTM=0.231 ipTM=0.178 tol=2.64
2024-12-05 16:00:47,172 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44.2 pTM=0.23 ipTM=0.178 tol=2.69
2024-12-05 16:01:03,980 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=44.6 pTM=0.231 ipTM=0.18 tol=2.83
2024-12-05 16:01:20,778 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.9 pTM=0.232 ipTM=0.182 tol=2.36
2024-12-05 16:01:37,558 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=44.5 pTM=0.232 ipTM=0.183 tol=2.42
2024-12-05 16:01:37,559 alphafold2_multimer_v3_model_2_seed_000 took 519.4s (30 recycles)
2024-12-05 16:01:54,903 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=43.1 pTM=0.224 ipTM=0.224
2024-12-05 16:02:11,787 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.3 pTM=0.223 ipTM=0.165 tol=15
2024-12-05 16:02:28,646 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=43.9 pTM=0.227 ipTM=0.172 tol=8.58
2024-12-05 16:02:45,515 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=43.4 pTM=0.228 ipTM=0.165 tol=7.23
2024-12-05 16:03:02,383 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=43 pTM=0.226 ipTM=0.166 tol=4.81
2024-12-05 16:03:19,217 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43.6 pTM=0.227 ipTM=0.161 tol=4.68
2024-12-05 16:03:36,072 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=42.7 pTM=0.226 ipTM=0.159 tol=4.75
2024-12-05 16:03:52,932 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=42.7 pTM=0.227 ipTM=0.207 tol=8.29
2024-12-05 16:04:09,784 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=42.7 pTM=0.226 ipTM=0.163 tol=5.3
2024-12-05 16:04:26,648 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.8 pTM=0.227 ipTM=0.18 tol=6.93
2024-12-05 16:04:43,539 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=42.4 pTM=0.227 ipTM=0.163 tol=6.14
2024-12-05 16:05:00,407 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=42.4 pTM=0.228 ipTM=0.2 tol=7.34
2024-12-05 16:05:17,283 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=42.1 pTM=0.229 ipTM=0.163 tol=5.67
2024-12-05 16:05:34,165 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=42.8 pTM=0.229 ipTM=0.206 tol=4.95
2024-12-05 16:05:51,041 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=42.2 pTM=0.227 ipTM=0.163 tol=3.24
2024-12-05 16:06:07,944 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=42.1 pTM=0.227 ipTM=0.17 tol=3.64
2024-12-05 16:06:24,837 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.4 pTM=0.228 ipTM=0.169 tol=3.33
2024-12-05 16:06:41,712 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=42.1 pTM=0.228 ipTM=0.168 tol=2.61
2024-12-05 16:06:58,627 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=42.6 pTM=0.229 ipTM=0.169 tol=3.69
2024-12-05 16:07:15,510 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=42.4 pTM=0.228 ipTM=0.168 tol=5.04
2024-12-05 16:07:32,360 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=41.4 pTM=0.229 ipTM=0.169 tol=4.75
2024-12-05 16:07:49,196 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42.1 pTM=0.229 ipTM=0.168 tol=5.54
2024-12-05 16:08:06,088 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=42.2 pTM=0.228 ipTM=0.167 tol=4.62
2024-12-05 16:08:22,950 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=42.2 pTM=0.23 ipTM=0.17 tol=2.83
2024-12-05 16:08:39,822 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=42.3 pTM=0.232 ipTM=0.17 tol=3.89
2024-12-05 16:08:56,717 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.4 pTM=0.229 ipTM=0.169 tol=2.79
2024-12-05 16:09:13,592 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=42.8 pTM=0.228 ipTM=0.167 tol=3.87
2024-12-05 16:09:30,481 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=42.2 pTM=0.226 ipTM=0.166 tol=3.94
2024-12-05 16:09:47,361 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=42.1 pTM=0.229 ipTM=0.168 tol=2.85
2024-12-05 16:10:04,221 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.1 pTM=0.229 ipTM=0.169 tol=3.66
2024-12-05 16:10:21,115 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=42.4 pTM=0.228 ipTM=0.165 tol=3.84
2024-12-05 16:10:21,116 alphafold2_multimer_v3_model_3_seed_000 took 523.1s (30 recycles)
2024-12-05 16:10:38,346 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.7 pTM=0.238 ipTM=0.193
2024-12-05 16:10:55,129 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=42.5 pTM=0.241 ipTM=0.189 tol=15.8
2024-12-05 16:11:11,919 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=42.6 pTM=0.258 ipTM=0.19 tol=8.8
2024-12-05 16:11:28,721 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=42 pTM=0.253 ipTM=0.191 tol=5.04
2024-12-05 16:11:45,467 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=41.8 pTM=0.275 ipTM=0.198 tol=6.92
2024-12-05 16:12:02,153 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=41.6 pTM=0.278 ipTM=0.193 tol=5.45
2024-12-05 16:12:18,874 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=41.9 pTM=0.286 ipTM=0.202 tol=4.39
2024-12-05 16:12:35,613 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=42 pTM=0.292 ipTM=0.197 tol=4.34
2024-12-05 16:12:52,362 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=42.3 pTM=0.296 ipTM=0.194 tol=4.18
2024-12-05 16:13:09,100 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=42.6 pTM=0.305 ipTM=0.201 tol=4.1
2024-12-05 16:13:25,852 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=42.3 pTM=0.3 ipTM=0.193 tol=3.74
2024-12-05 16:13:42,609 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=40.5 pTM=0.302 ipTM=0.194 tol=14.9
2024-12-05 16:13:59,342 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=42.2 pTM=0.301 ipTM=0.193 tol=11.9
2024-12-05 16:14:16,095 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=42.6 pTM=0.306 ipTM=0.197 tol=7.22
2024-12-05 16:14:32,840 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=42.2 pTM=0.302 ipTM=0.191 tol=3.85
2024-12-05 16:14:49,599 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=42.2 pTM=0.303 ipTM=0.194 tol=4.77
2024-12-05 16:15:06,345 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=42.2 pTM=0.303 ipTM=0.192 tol=4.55
2024-12-05 16:15:23,071 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=42.2 pTM=0.305 ipTM=0.193 tol=2.42
2024-12-05 16:15:39,792 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=42.8 pTM=0.315 ipTM=0.194 tol=2.32
2024-12-05 16:15:56,527 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=42.4 pTM=0.311 ipTM=0.195 tol=2.84
2024-12-05 16:16:13,224 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=42 pTM=0.306 ipTM=0.2 tol=3.07
2024-12-05 16:16:29,976 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=42.2 pTM=0.3 ipTM=0.193 tol=2.91
2024-12-05 16:16:46,716 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42.4 pTM=0.299 ipTM=0.189 tol=3.19
2024-12-05 16:17:03,425 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42.4 pTM=0.298 ipTM=0.193 tol=3.15
2024-12-05 16:17:20,150 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=42.7 pTM=0.303 ipTM=0.19 tol=1.98
2024-12-05 16:17:36,869 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=42.1 pTM=0.301 ipTM=0.193 tol=3.38
2024-12-05 16:17:53,585 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=42.1 pTM=0.298 ipTM=0.185 tol=4.11
2024-12-05 16:18:10,301 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=42.1 pTM=0.296 ipTM=0.184 tol=3.27
2024-12-05 16:18:27,025 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=42.1 pTM=0.296 ipTM=0.188 tol=3.12
2024-12-05 16:18:43,724 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=42 pTM=0.293 ipTM=0.19 tol=2.94
2024-12-05 16:19:00,443 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=42.2 pTM=0.299 ipTM=0.196 tol=2.79
2024-12-05 16:19:00,444 alphafold2_multimer_v3_model_4_seed_000 took 518.8s (30 recycles)
2024-12-05 16:19:17,784 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.4 pTM=0.23 ipTM=0.184
2024-12-05 16:19:34,656 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.2 pTM=0.224 ipTM=0.175 tol=12.6
2024-12-05 16:19:51,550 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=43.4 pTM=0.224 ipTM=0.174 tol=7.48
2024-12-05 16:20:08,442 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=43.4 pTM=0.226 ipTM=0.177 tol=9.21
2024-12-05 16:20:25,298 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.9 pTM=0.225 ipTM=0.181 tol=4.89
2024-12-05 16:20:42,195 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=42.8 pTM=0.229 ipTM=0.182 tol=8.29
2024-12-05 16:20:59,051 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.8 pTM=0.227 ipTM=0.183 tol=4.73
2024-12-05 16:21:15,911 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=43 pTM=0.229 ipTM=0.185 tol=5.3
2024-12-05 16:21:32,771 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=43 pTM=0.227 ipTM=0.181 tol=5.45
2024-12-05 16:21:49,653 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=42.7 pTM=0.231 ipTM=0.182 tol=3.7
2024-12-05 16:22:06,538 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.6 pTM=0.23 ipTM=0.183 tol=5.25
2024-12-05 16:22:23,413 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43.3 pTM=0.229 ipTM=0.178 tol=6.07
2024-12-05 16:22:40,286 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43.1 pTM=0.229 ipTM=0.177 tol=5.95
2024-12-05 16:22:57,135 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=43.3 pTM=0.229 ipTM=0.179 tol=6.23
2024-12-05 16:23:14,007 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.4 pTM=0.228 ipTM=0.178 tol=5.3
2024-12-05 16:23:30,881 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.4 pTM=0.229 ipTM=0.181 tol=3.88
2024-12-05 16:23:47,745 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.6 pTM=0.225 ipTM=0.177 tol=5.88
2024-12-05 16:24:04,621 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.5 pTM=0.227 ipTM=0.177 tol=2.91
2024-12-05 16:24:21,497 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.6 pTM=0.226 ipTM=0.174 tol=4.84
2024-12-05 16:24:38,349 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.2 pTM=0.224 ipTM=0.175 tol=5.18
2024-12-05 16:24:55,183 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=41.8 pTM=0.229 ipTM=0.179 tol=6.53
2024-12-05 16:25:12,043 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.4 pTM=0.226 ipTM=0.175 tol=7.17
2024-12-05 16:25:28,918 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.4 pTM=0.226 ipTM=0.173 tol=4.48
2024-12-05 16:25:45,786 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.5 pTM=0.227 ipTM=0.177 tol=5.07
2024-12-05 16:26:02,661 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.5 pTM=0.23 ipTM=0.182 tol=5.61
2024-12-05 16:26:19,566 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=42.4 pTM=0.23 ipTM=0.18 tol=4.62
2024-12-05 16:26:36,437 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=42.6 pTM=0.228 ipTM=0.176 tol=6.78
2024-12-05 16:26:53,308 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42.4 pTM=0.226 ipTM=0.173 tol=4.99
2024-12-05 16:27:10,175 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=42.4 pTM=0.229 ipTM=0.179 tol=2.54
2024-12-05 16:27:27,024 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=42.1 pTM=0.23 ipTM=0.182 tol=4.41
2024-12-05 16:27:43,912 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42.2 pTM=0.23 ipTM=0.179 tol=4.07
2024-12-05 16:27:43,913 alphafold2_multimer_v3_model_5_seed_000 took 523.0s (30 recycles)
2024-12-05 16:27:44,411 reranking models by 'multimer' metric
2024-12-05 16:27:45,639 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 16:29:42,718 Relaxation took 118.3s
2024-12-05 16:29:42,718 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=42.2 pTM=0.299 ipTM=0.196
2024-12-05 16:31:07,474 Relaxation took 84.8s
2024-12-05 16:31:07,474 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=44.5 pTM=0.232 ipTM=0.183
2024-12-05 16:32:22,998 Relaxation took 75.5s
2024-12-05 16:32:22,999 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42.2 pTM=0.23 ipTM=0.179
2024-12-05 16:33:36,103 Relaxation took 73.1s
2024-12-05 16:33:36,103 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=44 pTM=0.231 ipTM=0.173
2024-12-05 16:34:51,929 Relaxation took 75.8s
2024-12-05 16:34:51,929 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=42.4 pTM=0.228 ipTM=0.165
2024-12-05 16:34:58,871 Done