2024-12-05 15:51:28,949 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 15:51:29,326 Running on GPU
2024-12-05 15:51:33,391 Found 6 citations for tools or databases
2024-12-05 15:51:33,391 Query 1/1: E4F1_RPS27A (length 940)
2024-12-05 15:51:34,970 Sleeping for 7s. Reason: PENDING
2024-12-05 15:51:42,230 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:51:52,502 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:52:02,767 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:52:13,031 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:52:23,292 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:52:32,551 Sleeping for 6s. Reason: RUNNING
2024-12-05 15:52:38,815 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:52:49,073 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:52:58,341 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:53:07,598 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:53:17,863 Sleeping for 6s. Reason: RUNNING
2024-12-05 15:53:24,126 Sleeping for 8s. Reason: RUNNING
2024-12-05 15:53:35,492 Setting max_seq=508, max_extra_seq=2048
2024-12-05 15:56:38,657 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=43.6 pTM=0.248 ipTM=0.167
2024-12-05 15:57:01,425 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43.6 pTM=0.242 ipTM=0.174 tol=12.1
2024-12-05 15:57:24,250 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.1 pTM=0.244 ipTM=0.196 tol=9.96
2024-12-05 15:57:47,144 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=44.6 pTM=0.24 ipTM=0.198 tol=4.12
2024-12-05 15:58:10,065 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.4 pTM=0.245 ipTM=0.196 tol=4.57
2024-12-05 15:58:32,996 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44.5 pTM=0.244 ipTM=0.191 tol=3.55
2024-12-05 15:58:55,933 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=43.9 pTM=0.238 ipTM=0.19 tol=6.15
2024-12-05 15:59:18,871 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=45 pTM=0.239 ipTM=0.186 tol=3.57
2024-12-05 15:59:41,822 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44.5 pTM=0.236 ipTM=0.182 tol=2.35
2024-12-05 16:00:04,783 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=44.9 pTM=0.236 ipTM=0.18 tol=2.6
2024-12-05 16:00:27,753 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=44.5 pTM=0.23 ipTM=0.175 tol=3.36
2024-12-05 16:00:50,721 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=44.8 pTM=0.231 ipTM=0.177 tol=3.04
2024-12-05 16:01:13,689 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=44.7 pTM=0.234 ipTM=0.179 tol=3.19
2024-12-05 16:01:36,660 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=44.6 pTM=0.234 ipTM=0.177 tol=2.36
2024-12-05 16:01:59,620 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=44.8 pTM=0.233 ipTM=0.176 tol=1.61
2024-12-05 16:02:22,587 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=44.6 pTM=0.232 ipTM=0.178 tol=1.72
2024-12-05 16:02:45,569 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45 pTM=0.232 ipTM=0.177 tol=1.88
2024-12-05 16:03:08,554 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=44.4 pTM=0.23 ipTM=0.177 tol=2.04
2024-12-05 16:03:31,519 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=44.6 pTM=0.231 ipTM=0.18 tol=2.35
2024-12-05 16:03:54,478 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=44.2 pTM=0.23 ipTM=0.18 tol=3.11
2024-12-05 16:04:17,450 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=44.6 pTM=0.23 ipTM=0.177 tol=3.35
2024-12-05 16:04:40,410 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.2 pTM=0.23 ipTM=0.175 tol=1.95
2024-12-05 16:05:03,375 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=44.6 pTM=0.229 ipTM=0.177 tol=1.82
2024-12-05 16:05:26,336 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=44.8 pTM=0.229 ipTM=0.175 tol=2.7
2024-12-05 16:05:49,294 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=44.3 pTM=0.229 ipTM=0.178 tol=2.7
2024-12-05 16:06:12,257 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=44.5 pTM=0.229 ipTM=0.179 tol=1.99
2024-12-05 16:06:35,223 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=44.2 pTM=0.23 ipTM=0.182 tol=3.04
2024-12-05 16:06:58,191 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=44.2 pTM=0.23 ipTM=0.183 tol=2.25
2024-12-05 16:07:21,147 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=44.3 pTM=0.23 ipTM=0.184 tol=2.21
2024-12-05 16:07:44,114 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=44.5 pTM=0.23 ipTM=0.184 tol=3.19
2024-12-05 16:08:07,078 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=44.5 pTM=0.231 ipTM=0.182 tol=3.81
2024-12-05 16:08:07,078 alphafold2_multimer_v3_model_1_seed_000 took 864.4s (30 recycles)
2024-12-05 16:08:30,727 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=41.9 pTM=0.24 ipTM=0.169
2024-12-05 16:08:53,700 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=43.6 pTM=0.24 ipTM=0.186 tol=8.49
2024-12-05 16:09:16,693 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.8 pTM=0.234 ipTM=0.18 tol=7.39
2024-12-05 16:09:39,701 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=44.2 pTM=0.235 ipTM=0.167 tol=5.35
2024-12-05 16:10:02,719 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=43.8 pTM=0.235 ipTM=0.166 tol=6.43
2024-12-05 16:10:25,734 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=44.1 pTM=0.233 ipTM=0.162 tol=6.27
2024-12-05 16:10:48,755 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43.8 pTM=0.235 ipTM=0.166 tol=5.44
2024-12-05 16:11:11,785 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=44.7 pTM=0.234 ipTM=0.161 tol=3.72
2024-12-05 16:11:34,798 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=43.8 pTM=0.233 ipTM=0.164 tol=3.8
2024-12-05 16:11:57,821 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.2 pTM=0.233 ipTM=0.16 tol=3.14
2024-12-05 16:12:20,853 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=43.4 pTM=0.233 ipTM=0.162 tol=2.82
2024-12-05 16:12:43,872 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=44.1 pTM=0.231 ipTM=0.159 tol=4.29
2024-12-05 16:13:06,895 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=44 pTM=0.232 ipTM=0.16 tol=4.15
2024-12-05 16:13:29,916 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=43.7 pTM=0.232 ipTM=0.161 tol=3.71
2024-12-05 16:13:52,956 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=44 pTM=0.232 ipTM=0.161 tol=4.28
2024-12-05 16:14:15,988 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=44.2 pTM=0.231 ipTM=0.157 tol=4.11
2024-12-05 16:14:39,016 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=44.7 pTM=0.23 ipTM=0.159 tol=5.61
2024-12-05 16:15:02,038 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=44.1 pTM=0.229 ipTM=0.16 tol=4.8
2024-12-05 16:15:25,062 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=44.6 pTM=0.231 ipTM=0.161 tol=4.29
2024-12-05 16:15:48,089 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44.2 pTM=0.232 ipTM=0.163 tol=4.45
2024-12-05 16:16:11,126 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=44.6 pTM=0.23 ipTM=0.158 tol=3.59
2024-12-05 16:16:34,158 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=44.9 pTM=0.231 ipTM=0.158 tol=3.26
2024-12-05 16:16:57,198 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=44.3 pTM=0.231 ipTM=0.16 tol=2.1
2024-12-05 16:17:20,236 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=44.9 pTM=0.231 ipTM=0.159 tol=2.66
2024-12-05 16:17:43,279 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44.2 pTM=0.23 ipTM=0.16 tol=2.3
2024-12-05 16:18:06,323 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44 pTM=0.23 ipTM=0.16 tol=1.88
2024-12-05 16:18:29,358 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43.5 pTM=0.23 ipTM=0.16 tol=2.85
2024-12-05 16:18:52,392 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=43.8 pTM=0.23 ipTM=0.161 tol=2.26
2024-12-05 16:19:15,424 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=43.3 pTM=0.23 ipTM=0.163 tol=2.75
2024-12-05 16:19:38,454 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.8 pTM=0.231 ipTM=0.161 tol=3.54
2024-12-05 16:20:01,484 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=44.1 pTM=0.233 ipTM=0.161 tol=3.53
2024-12-05 16:20:01,485 alphafold2_multimer_v3_model_2_seed_000 took 713.7s (30 recycles)
2024-12-05 16:20:25,291 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42.6 pTM=0.229 ipTM=0.179
2024-12-05 16:20:48,429 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=43.8 pTM=0.225 ipTM=0.187 tol=13.7
2024-12-05 16:21:11,566 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45.2 pTM=0.221 ipTM=0.191 tol=8.11
2024-12-05 16:21:34,709 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=44.9 pTM=0.223 ipTM=0.176 tol=6.13
2024-12-05 16:21:57,858 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=44.4 pTM=0.226 ipTM=0.149 tol=5.51
2024-12-05 16:22:21,056 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=44.3 pTM=0.223 ipTM=0.15 tol=8.64
2024-12-05 16:22:44,239 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.7 pTM=0.225 ipTM=0.152 tol=5.51
2024-12-05 16:23:07,447 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=44.1 pTM=0.223 ipTM=0.151 tol=3.77
2024-12-05 16:23:30,642 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=43.5 pTM=0.224 ipTM=0.156 tol=3.81
2024-12-05 16:23:53,845 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=44.2 pTM=0.223 ipTM=0.149 tol=3.79
2024-12-05 16:24:17,046 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=43.8 pTM=0.222 ipTM=0.149 tol=5.67
2024-12-05 16:24:40,255 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=43.8 pTM=0.222 ipTM=0.149 tol=4.73
2024-12-05 16:25:03,471 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=44 pTM=0.223 ipTM=0.151 tol=3.94
2024-12-05 16:25:26,673 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=43.7 pTM=0.224 ipTM=0.151 tol=4.95
2024-12-05 16:25:49,876 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=43.8 pTM=0.223 ipTM=0.152 tol=3.93
2024-12-05 16:26:13,097 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=43.7 pTM=0.223 ipTM=0.151 tol=3.77
2024-12-05 16:26:36,293 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=43.8 pTM=0.224 ipTM=0.151 tol=4.11
2024-12-05 16:26:59,504 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=43.5 pTM=0.222 ipTM=0.149 tol=3.28
2024-12-05 16:27:22,714 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=43.7 pTM=0.222 ipTM=0.148 tol=4.36
2024-12-05 16:27:45,913 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=43.6 pTM=0.225 ipTM=0.15 tol=4.78
2024-12-05 16:28:09,125 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44.2 pTM=0.221 ipTM=0.147 tol=5.11
2024-12-05 16:28:32,334 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=44.2 pTM=0.223 ipTM=0.145 tol=4.05
2024-12-05 16:28:55,526 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=44 pTM=0.224 ipTM=0.146 tol=3.53
2024-12-05 16:29:18,723 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=44 pTM=0.223 ipTM=0.147 tol=4.48
2024-12-05 16:29:41,920 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=43.8 pTM=0.224 ipTM=0.147 tol=4.42
2024-12-05 16:30:05,117 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=43.4 pTM=0.223 ipTM=0.147 tol=5.36
2024-12-05 16:30:28,302 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=43.2 pTM=0.224 ipTM=0.15 tol=5.21
2024-12-05 16:30:51,498 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=43.3 pTM=0.224 ipTM=0.147 tol=5.64
2024-12-05 16:31:14,698 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=43.2 pTM=0.225 ipTM=0.148 tol=4.58
2024-12-05 16:31:37,897 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=43.6 pTM=0.224 ipTM=0.147 tol=3.87
2024-12-05 16:32:01,091 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=43.5 pTM=0.224 ipTM=0.146 tol=3.81
2024-12-05 16:32:01,092 alphafold2_multimer_v3_model_3_seed_000 took 718.9s (30 recycles)
2024-12-05 16:32:24,871 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.4 pTM=0.239 ipTM=0.183
2024-12-05 16:32:47,977 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.5 pTM=0.24 ipTM=0.193 tol=15.1
2024-12-05 16:33:11,081 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44 pTM=0.254 ipTM=0.178 tol=8.53
2024-12-05 16:33:34,180 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=44.2 pTM=0.264 ipTM=0.177 tol=6.8
2024-12-05 16:33:57,271 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=44.2 pTM=0.28 ipTM=0.165 tol=3.96
2024-12-05 16:34:20,356 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=43.8 pTM=0.278 ipTM=0.16 tol=3.89
2024-12-05 16:34:43,430 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=44 pTM=0.284 ipTM=0.169 tol=4.05
2024-12-05 16:35:06,537 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=43.6 pTM=0.272 ipTM=0.153 tol=5.24
2024-12-05 16:35:29,635 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=44 pTM=0.276 ipTM=0.159 tol=2.68
2024-12-05 16:35:52,726 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=43.8 pTM=0.273 ipTM=0.157 tol=3.65
2024-12-05 16:36:15,824 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=43.4 pTM=0.275 ipTM=0.164 tol=3.1
2024-12-05 16:36:38,917 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43.5 pTM=0.274 ipTM=0.166 tol=3.39
2024-12-05 16:37:01,995 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=43.5 pTM=0.283 ipTM=0.164 tol=4.21
2024-12-05 16:37:25,066 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=43.8 pTM=0.287 ipTM=0.165 tol=2.92
2024-12-05 16:37:48,131 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43.7 pTM=0.292 ipTM=0.172 tol=4.14
2024-12-05 16:38:11,198 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43.9 pTM=0.293 ipTM=0.163 tol=3.75
2024-12-05 16:38:34,284 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43.7 pTM=0.289 ipTM=0.162 tol=3.84
2024-12-05 16:38:57,367 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.3 pTM=0.288 ipTM=0.164 tol=2.69
2024-12-05 16:39:20,446 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.6 pTM=0.295 ipTM=0.163 tol=4.45
2024-12-05 16:39:43,497 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.8 pTM=0.302 ipTM=0.163 tol=4.6
2024-12-05 16:40:06,585 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.8 pTM=0.295 ipTM=0.159 tol=3.07
2024-12-05 16:40:29,659 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43.6 pTM=0.292 ipTM=0.163 tol=2.97
2024-12-05 16:40:52,732 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=44.2 pTM=0.295 ipTM=0.158 tol=2.49
2024-12-05 16:41:15,810 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=44.1 pTM=0.295 ipTM=0.157 tol=2.94
2024-12-05 16:41:38,898 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=43.8 pTM=0.29 ipTM=0.159 tol=3.83
2024-12-05 16:42:01,964 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=43.9 pTM=0.284 ipTM=0.16 tol=3.23
2024-12-05 16:42:25,031 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=43.4 pTM=0.287 ipTM=0.164 tol=2.31
2024-12-05 16:42:48,097 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.9 pTM=0.292 ipTM=0.164 tol=3.9
2024-12-05 16:43:11,154 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.6 pTM=0.303 ipTM=0.169 tol=3.87
2024-12-05 16:43:34,207 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43.5 pTM=0.302 ipTM=0.17 tol=2.77
2024-12-05 16:43:57,262 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.9 pTM=0.301 ipTM=0.171 tol=4.19
2024-12-05 16:43:57,263 alphafold2_multimer_v3_model_4_seed_000 took 715.5s (30 recycles)
2024-12-05 16:44:21,100 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=42.7 pTM=0.234 ipTM=0.182
2024-12-05 16:44:44,221 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.9 pTM=0.226 ipTM=0.293 tol=19.2
2024-12-05 16:45:07,359 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.5 pTM=0.223 ipTM=0.221 tol=12.1
2024-12-05 16:45:30,541 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=44.4 pTM=0.225 ipTM=0.155 tol=9.55
2024-12-05 16:45:53,717 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=43.9 pTM=0.228 ipTM=0.156 tol=6.81
2024-12-05 16:46:16,929 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=43.8 pTM=0.225 ipTM=0.157 tol=6.11
2024-12-05 16:46:40,140 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=43.2 pTM=0.229 ipTM=0.16 tol=9.12
2024-12-05 16:47:03,360 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=43.6 pTM=0.226 ipTM=0.159 tol=8.44
2024-12-05 16:47:26,566 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=43 pTM=0.228 ipTM=0.165 tol=9.81
2024-12-05 16:47:49,777 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=43.6 pTM=0.227 ipTM=0.16 tol=8.09
2024-12-05 16:48:12,989 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=43.2 pTM=0.228 ipTM=0.16 tol=5.22
2024-12-05 16:48:36,183 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43.2 pTM=0.227 ipTM=0.16 tol=5.9
2024-12-05 16:48:59,399 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43.6 pTM=0.229 ipTM=0.163 tol=7.65
2024-12-05 16:49:22,629 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=43.2 pTM=0.23 ipTM=0.165 tol=6.64
2024-12-05 16:49:45,849 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=43.3 pTM=0.228 ipTM=0.163 tol=5.52
2024-12-05 16:50:09,074 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=43.3 pTM=0.227 ipTM=0.162 tol=5.59
2024-12-05 16:50:32,279 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43.4 pTM=0.228 ipTM=0.16 tol=7.02
2024-12-05 16:50:55,491 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.1 pTM=0.226 ipTM=0.161 tol=6.46
2024-12-05 16:51:18,705 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.3 pTM=0.228 ipTM=0.161 tol=4.54
2024-12-05 16:51:41,888 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43.3 pTM=0.23 ipTM=0.162 tol=4.8
2024-12-05 16:52:05,144 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.5 pTM=0.228 ipTM=0.159 tol=6.44
2024-12-05 16:52:28,373 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.4 pTM=0.227 ipTM=0.159 tol=3.31
2024-12-05 16:52:51,573 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.5 pTM=0.228 ipTM=0.16 tol=3.55
2024-12-05 16:53:14,786 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.5 pTM=0.227 ipTM=0.163 tol=3.04
2024-12-05 16:53:37,980 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=43.4 pTM=0.229 ipTM=0.162 tol=3.22
2024-12-05 16:54:01,201 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.3 pTM=0.228 ipTM=0.169 tol=5.14
2024-12-05 16:54:24,422 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.3 pTM=0.229 ipTM=0.163 tol=4.57
2024-12-05 16:54:47,647 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.5 pTM=0.229 ipTM=0.162 tol=5.62
2024-12-05 16:55:10,881 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43.4 pTM=0.228 ipTM=0.16 tol=3.16
2024-12-05 16:55:34,097 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.7 pTM=0.228 ipTM=0.159 tol=2.8
2024-12-05 16:55:57,305 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43.7 pTM=0.231 ipTM=0.162 tol=3.14
2024-12-05 16:55:57,306 alphafold2_multimer_v3_model_5_seed_000 took 719.3s (30 recycles)
2024-12-05 16:55:58,009 reranking models by 'multimer' metric
2024-12-05 16:55:59,335 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 16:57:38,386 Relaxation took 100.4s
2024-12-05 16:57:38,386 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.9 pTM=0.301 ipTM=0.171
2024-12-05 16:59:18,077 Relaxation took 99.7s
2024-12-05 16:59:18,077 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=44.5 pTM=0.231 ipTM=0.182
2024-12-05 17:00:58,014 Relaxation took 99.9s
2024-12-05 17:00:58,014 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43.7 pTM=0.231 ipTM=0.162
2024-12-05 17:02:41,477 Relaxation took 103.5s
2024-12-05 17:02:41,477 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=44.1 pTM=0.233 ipTM=0.161
2024-12-05 17:04:25,211 Relaxation took 103.7s
2024-12-05 17:04:25,212 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=43.5 pTM=0.224 ipTM=0.146
2024-12-05 17:04:27,134 Done