2024-12-05 16:27:01,667 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 16:27:01,980 Running on GPU
2024-12-05 16:27:06,599 Found 6 citations for tools or databases
2024-12-05 16:27:06,599 Query 1/1: EP300_BAG2 (length 2625)
2024-12-05 16:27:06,919 Sleeping for 8s. Reason: PENDING
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2024-12-05 16:31:15,144 Sleeping for 8s. Reason: PENDING
2024-12-05 16:31:23,398 Sleeping for 6s. Reason: RUNNING
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2024-12-05 16:32:01,698 Sleeping for 5s. Reason: RUNNING
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2024-12-05 16:33:37,306 Sleeping for 6s. Reason: RUNNING
2024-12-05 16:33:43,567 Sleeping for 10s. Reason: RUNNING
2024-12-05 16:33:53,824 Sleeping for 6s. Reason: RUNNING
2024-12-05 16:34:00,085 Sleeping for 8s. Reason: RUNNING
2024-12-05 16:34:08,354 Sleeping for 6s. Reason: RUNNING
2024-12-05 16:34:14,609 Sleeping for 6s. Reason: RUNNING
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2024-12-05 16:34:26,120 Sleeping for 7s. Reason: RUNNING
2024-12-05 16:34:33,378 Sleeping for 7s. Reason: RUNNING
2024-12-05 16:34:40,636 Sleeping for 10s. Reason: RUNNING
2024-12-05 16:34:50,896 Sleeping for 7s. Reason: RUNNING
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2024-12-05 16:35:03,428 Sleeping for 8s. Reason: RUNNING
2024-12-05 16:35:20,929 Setting max_seq=508, max_extra_seq=2048
2024-12-05 16:44:55,209 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=35.2 pTM=0.357 ipTM=0.288
2024-12-05 16:50:55,756 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=37.5 pTM=0.373 ipTM=0.296 tol=26.5
2024-12-05 16:56:56,160 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=38.1 pTM=0.378 ipTM=0.298 tol=24
2024-12-05 17:02:56,709 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=38.2 pTM=0.374 ipTM=0.281 tol=23.3
2024-12-05 17:08:57,292 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=38.4 pTM=0.378 ipTM=0.312 tol=27.2
2024-12-05 17:14:57,837 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=38.4 pTM=0.377 ipTM=0.308 tol=18.2
2024-12-05 17:20:58,298 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=38.7 pTM=0.38 ipTM=0.304 tol=19
2024-12-05 17:26:58,737 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=38.5 pTM=0.378 ipTM=0.301 tol=17.7
2024-12-05 17:32:59,227 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=38.6 pTM=0.379 ipTM=0.288 tol=17.3
2024-12-05 17:38:59,918 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=38.7 pTM=0.376 ipTM=0.287 tol=16.9
2024-12-05 17:45:00,420 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=38.9 pTM=0.378 ipTM=0.309 tol=17.4
2024-12-05 17:51:01,001 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=38.8 pTM=0.375 ipTM=0.289 tol=17.2
2024-12-05 17:57:01,644 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=38.8 pTM=0.377 ipTM=0.294 tol=11.2
2024-12-05 18:03:02,252 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=38.9 pTM=0.375 ipTM=0.31 tol=16.1
2024-12-05 18:09:02,814 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=38.8 pTM=0.376 ipTM=0.31 tol=16.7
2024-12-05 18:15:03,433 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=38.9 pTM=0.375 ipTM=0.326 tol=14.2
2024-12-05 18:21:04,014 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=39.2 pTM=0.377 ipTM=0.358 tol=16.2
2024-12-05 18:27:04,592 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=38.9 pTM=0.374 ipTM=0.343 tol=13.8
2024-12-05 18:33:05,090 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=39 pTM=0.375 ipTM=0.295 tol=12
2024-12-05 18:39:05,633 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=38.9 pTM=0.377 ipTM=0.303 tol=10.1
2024-12-05 18:45:06,192 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=39.1 pTM=0.376 ipTM=0.304 tol=14.8
2024-12-05 18:51:06,837 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=38.8 pTM=0.376 ipTM=0.292 tol=14.8
2024-12-05 18:57:07,363 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=38.8 pTM=0.376 ipTM=0.292 tol=7.67
2024-12-05 19:03:07,986 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=39 pTM=0.375 ipTM=0.293 tol=12.3
2024-12-05 19:09:08,528 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=38.9 pTM=0.377 ipTM=0.299 tol=12.3
2024-12-05 19:15:09,032 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=38.9 pTM=0.376 ipTM=0.299 tol=6.98
2024-12-05 19:21:09,665 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=38.9 pTM=0.376 ipTM=0.298 tol=9.22
2024-12-05 19:27:10,235 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=38.9 pTM=0.377 ipTM=0.299 tol=16.8
2024-12-05 19:33:10,840 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=38.8 pTM=0.376 ipTM=0.302 tol=17.8
2024-12-05 19:39:11,484 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=38.5 pTM=0.377 ipTM=0.3 tol=13.6
2024-12-05 19:45:12,082 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=38.7 pTM=0.373 ipTM=0.295 tol=15.3
2024-12-05 19:45:12,085 alphafold2_multimer_v3_model_1_seed_000 took 11376.1s (30 recycles)
2024-12-05 19:51:16,393 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=38 pTM=0.374 ipTM=0.269
2024-12-05 19:57:17,258 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=40.8 pTM=0.379 ipTM=0.26 tol=26.5
2024-12-05 20:03:18,143 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.1 pTM=0.38 ipTM=0.261 tol=18.7
2024-12-05 20:09:19,002 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41.3 pTM=0.381 ipTM=0.26 tol=17.3
2024-12-05 20:15:19,951 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=41.4 pTM=0.382 ipTM=0.259 tol=16.8
2024-12-05 20:21:20,912 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=41.2 pTM=0.382 ipTM=0.263 tol=13.9
2024-12-05 20:27:21,917 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=41.3 pTM=0.382 ipTM=0.256 tol=10.4
2024-12-05 20:33:22,836 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=41.3 pTM=0.383 ipTM=0.251 tol=10.5
2024-12-05 20:39:23,859 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=41.3 pTM=0.383 ipTM=0.252 tol=9.21
2024-12-05 20:45:24,872 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=41.3 pTM=0.382 ipTM=0.25 tol=8.62
2024-12-05 20:51:25,908 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=41.4 pTM=0.381 ipTM=0.25 tol=7.99
2024-12-05 20:57:26,904 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=41.4 pTM=0.381 ipTM=0.249 tol=9.53
2024-12-05 21:03:27,734 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=41.3 pTM=0.382 ipTM=0.251 tol=7.15
2024-12-05 21:09:28,754 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.1 pTM=0.38 ipTM=0.254 tol=6.91
2024-12-05 21:15:29,770 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=41.5 pTM=0.381 ipTM=0.25 tol=6.71
2024-12-05 21:21:30,801 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.2 pTM=0.38 ipTM=0.251 tol=9.57
2024-12-05 21:27:31,822 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=41.4 pTM=0.381 ipTM=0.248 tol=8.03
2024-12-05 21:33:32,851 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=41.4 pTM=0.383 ipTM=0.248 tol=6.54
2024-12-05 21:39:33,814 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41.6 pTM=0.381 ipTM=0.247 tol=7.61
2024-12-05 21:45:34,830 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41.3 pTM=0.381 ipTM=0.25 tol=9.12
2024-12-05 21:51:35,798 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.4 pTM=0.38 ipTM=0.248 tol=9.98
2024-12-05 21:57:36,808 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.4 pTM=0.38 ipTM=0.251 tol=9.16
2024-12-05 22:03:37,711 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=41.4 pTM=0.379 ipTM=0.25 tol=8.15
2024-12-05 22:09:38,803 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41.4 pTM=0.379 ipTM=0.254 tol=10.8
2024-12-05 22:15:39,885 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=41.6 pTM=0.379 ipTM=0.253 tol=8.5
2024-12-05 22:21:41,027 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41.4 pTM=0.38 ipTM=0.256 tol=10.4
2024-12-05 22:27:42,102 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=41.2 pTM=0.379 ipTM=0.255 tol=10.7
2024-12-05 22:33:43,114 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=41.4 pTM=0.38 ipTM=0.253 tol=11.4
2024-12-05 22:39:44,191 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=41.2 pTM=0.38 ipTM=0.254 tol=12.4
2024-12-05 22:45:45,237 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=41.2 pTM=0.379 ipTM=0.255 tol=9.67
2024-12-05 22:51:46,286 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=41.4 pTM=0.379 ipTM=0.251 tol=7.76
2024-12-05 22:51:46,290 alphafold2_multimer_v3_model_2_seed_000 took 11190.3s (30 recycles)
2024-12-05 22:57:51,636 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=36.3 pTM=0.343 ipTM=0.258
2024-12-05 23:03:53,468 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=38.2 pTM=0.369 ipTM=0.265 tol=32.2
2024-12-05 23:09:55,434 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=38.8 pTM=0.368 ipTM=0.252 tol=32.5
2024-12-05 23:15:57,320 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=39.3 pTM=0.373 ipTM=0.264 tol=21.5
2024-12-05 23:21:59,340 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=39.8 pTM=0.375 ipTM=0.263 tol=14.6
2024-12-05 23:28:01,381 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=40.4 pTM=0.376 ipTM=0.486 tol=24
2024-12-05 23:34:03,371 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=40.9 pTM=0.389 ipTM=0.363 tol=16.6
2024-12-05 23:40:05,305 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=40.8 pTM=0.39 ipTM=0.336 tol=26.6
2024-12-05 23:46:07,333 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.2 pTM=0.398 ipTM=0.355 tol=20.8
2024-12-05 23:52:09,377 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=40.9 pTM=0.396 ipTM=0.32 tol=21.5
2024-12-05 23:58:11,457 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.4 pTM=0.399 ipTM=0.342 tol=23.6
2024-12-06 00:04:13,448 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.3 pTM=0.397 ipTM=0.284 tol=17.2
2024-12-06 00:10:15,445 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.6 pTM=0.401 ipTM=0.293 tol=16.4
2024-12-06 00:16:17,385 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.6 pTM=0.4 ipTM=0.392 tol=17.6
2024-12-06 00:22:19,323 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.5 pTM=0.402 ipTM=0.333 tol=15.8
2024-12-06 00:28:21,164 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.4 pTM=0.399 ipTM=0.286 tol=12.5
2024-12-06 00:34:23,161 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.2 pTM=0.403 ipTM=0.453 tol=27.5
2024-12-06 00:40:25,216 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=41.3 pTM=0.397 ipTM=0.341 tol=14
2024-12-06 00:46:27,297 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=41.5 pTM=0.4 ipTM=0.33 tol=21.9
2024-12-06 00:52:29,234 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=41.5 pTM=0.399 ipTM=0.315 tol=19.9
2024-12-06 00:58:31,245 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=41.9 pTM=0.401 ipTM=0.326 tol=20.4
2024-12-06 01:04:33,324 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=41.5 pTM=0.4 ipTM=0.292 tol=24.2
2024-12-06 01:10:35,356 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=41.3 pTM=0.402 ipTM=0.295 tol=20.8
2024-12-06 01:16:37,325 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=41.3 pTM=0.399 ipTM=0.29 tol=16.4
2024-12-06 01:22:39,293 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=42.1 pTM=0.403 ipTM=0.379 tol=13.5
2024-12-06 01:28:41,290 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=41.6 pTM=0.399 ipTM=0.338 tol=21.7
2024-12-06 01:34:43,358 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41.3 pTM=0.4 ipTM=0.287 tol=16.5
2024-12-06 01:40:45,384 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=41.1 pTM=0.398 ipTM=0.355 tol=23.8
2024-12-06 01:46:47,281 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.2 pTM=0.4 ipTM=0.293 tol=15.4
2024-12-06 01:52:49,342 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=41.4 pTM=0.396 ipTM=0.325 tol=25.7
2024-12-06 01:58:51,448 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.5 pTM=0.399 ipTM=0.317 tol=14.8
2024-12-06 01:58:51,452 alphafold2_multimer_v3_model_3_seed_000 took 11221.2s (30 recycles)
2024-12-06 02:04:56,911 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=36.4 pTM=0.371 ipTM=0.318
2024-12-06 02:10:59,266 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=37 pTM=0.37 ipTM=0.272 tol=21.9
2024-12-06 02:17:01,625 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=37.5 pTM=0.37 ipTM=0.263 tol=21.9
2024-12-06 02:23:03,832 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=37.9 pTM=0.368 ipTM=0.26 tol=21.3
2024-12-06 02:29:06,146 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=38.3 pTM=0.372 ipTM=0.326 tol=20.5
2024-12-06 02:35:08,611 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=38.1 pTM=0.372 ipTM=0.266 tol=18.5
2024-12-06 02:41:10,966 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=38.3 pTM=0.373 ipTM=0.271 tol=21.3
2024-12-06 02:47:13,306 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=38 pTM=0.375 ipTM=0.268 tol=22.9
2024-12-06 02:53:15,548 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=38.8 pTM=0.387 ipTM=0.267 tol=17.6
2024-12-06 02:59:17,739 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=38.9 pTM=0.39 ipTM=0.278 tol=16
2024-12-06 03:05:19,828 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=39.3 pTM=0.393 ipTM=0.294 tol=12.3
2024-12-06 03:11:21,847 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=39.2 pTM=0.391 ipTM=0.312 tol=16
2024-12-06 03:17:23,809 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=39.3 pTM=0.394 ipTM=0.274 tol=12.7
2024-12-06 03:23:25,798 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=39.5 pTM=0.394 ipTM=0.288 tol=12.2
2024-12-06 03:29:27,669 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=39.8 pTM=0.396 ipTM=0.313 tol=12.3
2024-12-06 03:35:29,779 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=39.8 pTM=0.395 ipTM=0.305 tol=15.1
2024-12-06 03:41:31,857 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=39.8 pTM=0.395 ipTM=0.3 tol=12.4
2024-12-06 03:47:33,844 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=39.3 pTM=0.391 ipTM=0.323 tol=15.7
2024-12-06 03:53:35,920 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=39.8 pTM=0.393 ipTM=0.292 tol=12.9
2024-12-06 03:59:37,857 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=39.9 pTM=0.396 ipTM=0.301 tol=15.7
2024-12-06 04:05:40,037 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=39.7 pTM=0.394 ipTM=0.289 tol=15.8
2024-12-06 04:11:42,175 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=39.6 pTM=0.395 ipTM=0.281 tol=17.3
2024-12-06 04:17:44,270 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=39.5 pTM=0.395 ipTM=0.296 tol=20.3
2024-12-06 04:23:46,403 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=39.9 pTM=0.397 ipTM=0.288 tol=15.4
2024-12-06 04:29:48,542 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=39.8 pTM=0.397 ipTM=0.297 tol=11.1
2024-12-06 04:35:50,611 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=39.9 pTM=0.399 ipTM=0.302 tol=9.77
2024-12-06 04:41:52,552 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=39.6 pTM=0.396 ipTM=0.327 tol=18.2
2024-12-06 04:47:54,691 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=39.6 pTM=0.396 ipTM=0.275 tol=14.5
2024-12-06 04:53:56,776 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.4 pTM=0.393 ipTM=0.29 tol=20
2024-12-06 04:59:58,744 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=40.2 pTM=0.401 ipTM=0.31 tol=18.2
2024-12-06 05:06:00,754 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=39.8 pTM=0.396 ipTM=0.289 tol=9.98
2024-12-06 05:06:00,758 alphafold2_multimer_v3_model_4_seed_000 took 11225.4s (30 recycles)
2024-12-06 05:12:06,229 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=36.2 pTM=0.358 ipTM=0.273
2024-12-06 05:18:08,304 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=37.9 pTM=0.372 ipTM=0.262 tol=28.4
2024-12-06 05:24:10,317 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=38.8 pTM=0.377 ipTM=0.256 tol=20.5
2024-12-06 05:30:12,406 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=39.1 pTM=0.378 ipTM=0.277 tol=19.5
2024-12-06 05:36:14,358 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=39.8 pTM=0.389 ipTM=0.287 tol=21
2024-12-06 05:42:16,201 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=40 pTM=0.399 ipTM=0.326 tol=18.7
2024-12-06 05:48:18,207 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=40.8 pTM=0.404 ipTM=0.298 tol=17.5
2024-12-06 05:54:20,083 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=40.7 pTM=0.403 ipTM=0.299 tol=15.1
2024-12-06 06:00:21,932 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=40.7 pTM=0.407 ipTM=0.304 tol=25.9
2024-12-06 06:06:23,916 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=40.4 pTM=0.405 ipTM=0.292 tol=22.6
2024-12-06 06:12:25,880 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=40.9 pTM=0.408 ipTM=0.304 tol=21.1
2024-12-06 06:18:27,767 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=40.8 pTM=0.407 ipTM=0.308 tol=19.7
2024-12-06 06:24:29,679 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=41 pTM=0.412 ipTM=0.313 tol=19.5
2024-12-06 06:30:31,631 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41 pTM=0.412 ipTM=0.316 tol=18.5
2024-12-06 06:36:33,495 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.4 pTM=0.414 ipTM=0.317 tol=20.6
2024-12-06 06:42:35,318 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41.4 pTM=0.415 ipTM=0.304 tol=19.9
2024-12-06 06:48:37,238 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=41.3 pTM=0.413 ipTM=0.302 tol=20.9
2024-12-06 06:54:39,165 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=41.5 pTM=0.413 ipTM=0.303 tol=24.3
2024-12-06 07:00:41,141 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=41.5 pTM=0.414 ipTM=0.3 tol=20.6
2024-12-06 07:06:43,021 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=41.6 pTM=0.416 ipTM=0.304 tol=20.9
2024-12-06 07:12:44,927 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=41.7 pTM=0.416 ipTM=0.301 tol=17.6
2024-12-06 07:18:46,849 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=41.7 pTM=0.417 ipTM=0.301 tol=18.2
2024-12-06 07:24:48,704 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=41.9 pTM=0.417 ipTM=0.305 tol=15.3
2024-12-06 07:30:50,595 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=41.7 pTM=0.417 ipTM=0.298 tol=18.7
2024-12-06 07:36:52,527 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=41.9 pTM=0.419 ipTM=0.3 tol=19.1
2024-12-06 07:42:54,464 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=41.7 pTM=0.416 ipTM=0.295 tol=15.3
2024-12-06 07:48:56,291 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=41.9 pTM=0.417 ipTM=0.301 tol=20.9
2024-12-06 07:54:58,314 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=41.7 pTM=0.415 ipTM=0.292 tol=15.8
2024-12-06 08:01:00,250 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=41.7 pTM=0.416 ipTM=0.305 tol=17
2024-12-06 08:07:02,093 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=41.6 pTM=0.415 ipTM=0.292 tol=19.9
2024-12-06 08:13:04,048 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42 pTM=0.416 ipTM=0.298 tol=19
2024-12-06 08:13:04,052 alphafold2_multimer_v3_model_5_seed_000 took 11219.4s (30 recycles)
2024-12-06 08:13:07,990 reranking models by 'multimer' metric
2024-12-06 08:13:12,563 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 08:24:30,497 Relaxation took 682.5s
2024-12-06 08:24:30,497 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.5 pTM=0.399 ipTM=0.317
2024-12-06 08:38:47,543 Relaxation took 857.0s
2024-12-06 08:38:47,543 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42 pTM=0.416 ipTM=0.298
2024-12-06 08:48:52,397 Relaxation took 604.9s
2024-12-06 08:48:52,397 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=39.8 pTM=0.396 ipTM=0.289
2024-12-06 08:58:05,136 Relaxation took 552.7s
2024-12-06 08:58:05,136 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=38.7 pTM=0.373 ipTM=0.295
2024-12-06 09:10:16,031 Relaxation took 730.9s
2024-12-06 09:10:16,031 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=41.4 pTM=0.379 ipTM=0.251
2024-12-06 09:10:24,429 Done