2024-12-05 16:35:51,931 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 16:35:52,258 Running on GPU
2024-12-05 16:35:56,964 Found 6 citations for tools or databases
2024-12-05 16:35:56,964 Query 1/1: FANCL_VSIG1 (length 762)
2024-12-05 16:35:57,241 Sleeping for 7s. Reason: PENDING
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2024-12-05 16:37:00,322 Sleeping for 9s. Reason: RUNNING
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2024-12-05 16:38:02,141 Sleeping for 8s. Reason: RUNNING
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2024-12-05 16:39:01,982 Sleeping for 5s. Reason: RUNNING
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2024-12-05 16:39:17,502 Sleeping for 5s. Reason: RUNNING
2024-12-05 16:39:22,753 Sleeping for 9s. Reason: RUNNING
2024-12-05 16:39:32,007 Sleeping for 6s. Reason: RUNNING
2024-12-05 16:39:38,267 Sleeping for 10s. Reason: RUNNING
2024-12-05 16:39:49,959 Sleeping for 10s. Reason: PENDING
2024-12-05 16:40:00,224 Sleeping for 8s. Reason: RUNNING
2024-12-05 16:40:08,478 Sleeping for 5s. Reason: RUNNING
2024-12-05 16:40:13,730 Sleeping for 6s. Reason: RUNNING
2024-12-05 16:40:19,984 Sleeping for 6s. Reason: RUNNING
2024-12-05 16:40:26,241 Sleeping for 10s. Reason: RUNNING
2024-12-05 16:40:36,495 Sleeping for 9s. Reason: RUNNING
2024-12-05 16:40:45,758 Sleeping for 5s. Reason: RUNNING
2024-12-05 16:40:51,022 Sleeping for 9s. Reason: RUNNING
2024-12-05 16:41:00,281 Sleeping for 7s. Reason: RUNNING
2024-12-05 16:41:07,542 Sleeping for 8s. Reason: RUNNING
2024-12-05 16:41:17,906 Setting max_seq=508, max_extra_seq=2048
2024-12-05 16:43:54,702 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.9 pTM=0.389 ipTM=0.135
2024-12-05 16:44:06,304 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.9 pTM=0.383 ipTM=0.146 tol=10.7
2024-12-05 16:44:17,924 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.4 pTM=0.365 ipTM=0.141 tol=7.04
2024-12-05 16:44:29,570 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.7 pTM=0.36 ipTM=0.142 tol=5.78
2024-12-05 16:44:41,223 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66 pTM=0.365 ipTM=0.144 tol=2.95
2024-12-05 16:44:52,889 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.9 pTM=0.357 ipTM=0.146 tol=2.38
2024-12-05 16:45:04,568 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.9 pTM=0.358 ipTM=0.145 tol=2.93
2024-12-05 16:45:16,256 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.9 pTM=0.359 ipTM=0.144 tol=3.2
2024-12-05 16:45:27,978 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.8 pTM=0.358 ipTM=0.143 tol=2.21
2024-12-05 16:45:39,690 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.4 pTM=0.363 ipTM=0.144 tol=1.57
2024-12-05 16:45:51,388 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.1 pTM=0.363 ipTM=0.143 tol=1.42
2024-12-05 16:46:03,089 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66 pTM=0.361 ipTM=0.145 tol=1.61
2024-12-05 16:46:14,819 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.9 pTM=0.359 ipTM=0.145 tol=1.93
2024-12-05 16:46:26,549 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.1 pTM=0.36 ipTM=0.151 tol=1.89
2024-12-05 16:46:38,292 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.9 pTM=0.359 ipTM=0.147 tol=1.69
2024-12-05 16:46:50,024 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.8 pTM=0.359 ipTM=0.147 tol=2.63
2024-12-05 16:47:01,784 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66 pTM=0.358 ipTM=0.148 tol=1.63
2024-12-05 16:47:13,526 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.1 pTM=0.36 ipTM=0.153 tol=1.04
2024-12-05 16:47:25,279 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.9 pTM=0.36 ipTM=0.149 tol=1.32
2024-12-05 16:47:37,037 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.1 pTM=0.36 ipTM=0.151 tol=1.94
2024-12-05 16:47:48,787 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66 pTM=0.36 ipTM=0.15 tol=1.03
2024-12-05 16:48:00,558 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.1 pTM=0.362 ipTM=0.152 tol=2.16
2024-12-05 16:48:12,296 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66 pTM=0.362 ipTM=0.15 tol=2.41
2024-12-05 16:48:24,062 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.1 pTM=0.362 ipTM=0.156 tol=1.74
2024-12-05 16:48:35,815 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66 pTM=0.36 ipTM=0.149 tol=1.22
2024-12-05 16:48:47,578 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66 pTM=0.36 ipTM=0.147 tol=1.13
2024-12-05 16:48:59,350 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.1 pTM=0.36 ipTM=0.148 tol=1.9
2024-12-05 16:49:11,102 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.9 pTM=0.361 ipTM=0.152 tol=2.59
2024-12-05 16:49:22,851 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.9 pTM=0.36 ipTM=0.148 tol=1.18
2024-12-05 16:49:34,614 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.9 pTM=0.36 ipTM=0.154 tol=2.45
2024-12-05 16:49:46,372 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.8 pTM=0.359 ipTM=0.147 tol=1.94
2024-12-05 16:49:46,373 alphafold2_multimer_v3_model_1_seed_000 took 503.1s (30 recycles)
2024-12-05 16:49:58,484 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.5 pTM=0.39 ipTM=0.152
2024-12-05 16:50:10,239 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.371 ipTM=0.141 tol=12
2024-12-05 16:50:21,983 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.4 pTM=0.372 ipTM=0.147 tol=7.91
2024-12-05 16:50:33,712 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.4 pTM=0.372 ipTM=0.144 tol=5.26
2024-12-05 16:50:45,427 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68 pTM=0.375 ipTM=0.144 tol=3.42
2024-12-05 16:50:57,173 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.9 pTM=0.369 ipTM=0.143 tol=2.82
2024-12-05 16:51:08,949 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.3 pTM=0.373 ipTM=0.143 tol=2.55
2024-12-05 16:51:20,714 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.1 pTM=0.372 ipTM=0.142 tol=2.06
2024-12-05 16:51:32,497 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68 pTM=0.372 ipTM=0.143 tol=1.83
2024-12-05 16:51:44,288 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.4 pTM=0.377 ipTM=0.143 tol=1.14
2024-12-05 16:51:56,064 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.4 pTM=0.377 ipTM=0.144 tol=1.87
2024-12-05 16:52:07,838 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.2 pTM=0.376 ipTM=0.146 tol=2.18
2024-12-05 16:52:19,595 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.5 pTM=0.378 ipTM=0.145 tol=2.16
2024-12-05 16:52:31,336 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.4 pTM=0.378 ipTM=0.149 tol=1.49
2024-12-05 16:52:43,103 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.2 pTM=0.375 ipTM=0.144 tol=1.25
2024-12-05 16:52:54,851 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.3 pTM=0.379 ipTM=0.149 tol=1.82
2024-12-05 16:53:06,624 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.4 pTM=0.379 ipTM=0.151 tol=1.19
2024-12-05 16:53:18,373 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.3 pTM=0.376 ipTM=0.15 tol=1.15
2024-12-05 16:53:30,099 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.4 pTM=0.378 ipTM=0.149 tol=1.8
2024-12-05 16:53:41,870 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.6 pTM=0.376 ipTM=0.15 tol=1.58
2024-12-05 16:53:53,644 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.3 pTM=0.377 ipTM=0.15 tol=1.28
2024-12-05 16:54:05,421 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.5 pTM=0.379 ipTM=0.149 tol=1.53
2024-12-05 16:54:17,169 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.5 pTM=0.381 ipTM=0.155 tol=1.2
2024-12-05 16:54:28,938 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.7 pTM=0.379 ipTM=0.151 tol=2.38
2024-12-05 16:54:40,713 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.6 pTM=0.381 ipTM=0.152 tol=1.32
2024-12-05 16:54:52,468 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.5 pTM=0.379 ipTM=0.149 tol=1.45
2024-12-05 16:55:04,242 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.3 pTM=0.375 ipTM=0.148 tol=1.75
2024-12-05 16:55:16,014 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.4 pTM=0.377 ipTM=0.148 tol=1.3
2024-12-05 16:55:27,793 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.4 pTM=0.377 ipTM=0.15 tol=1.97
2024-12-05 16:55:39,550 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.1 pTM=0.375 ipTM=0.144 tol=1.77
2024-12-05 16:55:51,307 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.4 pTM=0.375 ipTM=0.149 tol=1.07
2024-12-05 16:55:51,307 alphafold2_multimer_v3_model_2_seed_000 took 364.6s (30 recycles)
2024-12-05 16:56:03,473 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.6 pTM=0.368 ipTM=0.143
2024-12-05 16:56:15,265 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.4 pTM=0.352 ipTM=0.132 tol=14
2024-12-05 16:56:27,047 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.5 pTM=0.352 ipTM=0.143 tol=9.02
2024-12-05 16:56:38,843 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.4 pTM=0.348 ipTM=0.13 tol=10.3
2024-12-05 16:56:50,646 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.5 pTM=0.351 ipTM=0.137 tol=10
2024-12-05 16:57:02,439 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.1 pTM=0.354 ipTM=0.13 tol=8.33
2024-12-05 16:57:14,220 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.3 pTM=0.349 ipTM=0.132 tol=4.31
2024-12-05 16:57:26,000 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.3 pTM=0.352 ipTM=0.134 tol=6.09
2024-12-05 16:57:37,786 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.6 pTM=0.355 ipTM=0.134 tol=2.52
2024-12-05 16:57:49,561 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.8 pTM=0.358 ipTM=0.138 tol=5.74
2024-12-05 16:58:01,329 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.7 pTM=0.361 ipTM=0.142 tol=5.79
2024-12-05 16:58:13,100 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.8 pTM=0.362 ipTM=0.144 tol=5.98
2024-12-05 16:58:24,877 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.8 pTM=0.362 ipTM=0.14 tol=3.57
2024-12-05 16:58:36,636 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.7 pTM=0.363 ipTM=0.146 tol=4.46
2024-12-05 16:58:48,400 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.6 pTM=0.359 ipTM=0.139 tol=5
2024-12-05 16:59:00,171 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.6 pTM=0.363 ipTM=0.148 tol=3.01
2024-12-05 16:59:11,954 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.7 pTM=0.36 ipTM=0.144 tol=3.4
2024-12-05 16:59:23,704 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.7 pTM=0.361 ipTM=0.144 tol=2.97
2024-12-05 16:59:35,473 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.6 pTM=0.362 ipTM=0.141 tol=3.21
2024-12-05 16:59:47,230 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.6 pTM=0.361 ipTM=0.149 tol=4.78
2024-12-05 16:59:59,006 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.5 pTM=0.359 ipTM=0.144 tol=4.77
2024-12-05 17:00:10,770 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.8 pTM=0.364 ipTM=0.144 tol=5.82
2024-12-05 17:00:22,557 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.6 pTM=0.363 ipTM=0.141 tol=6.98
2024-12-05 17:00:34,345 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.7 pTM=0.364 ipTM=0.145 tol=4.67
2024-12-05 17:00:46,128 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.7 pTM=0.363 ipTM=0.146 tol=3.93
2024-12-05 17:00:57,902 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.8 pTM=0.364 ipTM=0.147 tol=4.79
2024-12-05 17:01:09,694 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.8 pTM=0.361 ipTM=0.14 tol=4.92
2024-12-05 17:01:21,458 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.4 pTM=0.361 ipTM=0.143 tol=7.03
2024-12-05 17:01:33,246 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.6 pTM=0.363 ipTM=0.14 tol=6.02
2024-12-05 17:01:45,015 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.2 pTM=0.36 ipTM=0.145 tol=2.38
2024-12-05 17:01:56,798 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.4 pTM=0.36 ipTM=0.14 tol=2.36
2024-12-05 17:01:56,799 alphafold2_multimer_v3_model_3_seed_000 took 365.1s (30 recycles)
2024-12-05 17:02:08,915 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.5 pTM=0.391 ipTM=0.148
2024-12-05 17:02:20,644 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.5 pTM=0.359 ipTM=0.178 tol=19.8
2024-12-05 17:02:32,393 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64 pTM=0.361 ipTM=0.149 tol=7.64
2024-12-05 17:02:44,141 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.5 pTM=0.353 ipTM=0.153 tol=6.57
2024-12-05 17:02:55,900 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.9 pTM=0.345 ipTM=0.149 tol=5.53
2024-12-05 17:03:07,669 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63 pTM=0.347 ipTM=0.153 tol=6.32
2024-12-05 17:03:19,441 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63 pTM=0.345 ipTM=0.146 tol=5.35
2024-12-05 17:03:31,196 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.4 pTM=0.354 ipTM=0.172 tol=10.8
2024-12-05 17:03:42,939 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.2 pTM=0.342 ipTM=0.153 tol=12
2024-12-05 17:03:54,731 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.4 pTM=0.355 ipTM=0.172 tol=5.39
2024-12-05 17:04:06,524 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.5 pTM=0.343 ipTM=0.148 tol=3.51
2024-12-05 17:04:18,305 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.2 pTM=0.345 ipTM=0.158 tol=7.76
2024-12-05 17:04:30,114 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.7 pTM=0.351 ipTM=0.164 tol=9.65
2024-12-05 17:04:41,926 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.8 pTM=0.346 ipTM=0.149 tol=4.04
2024-12-05 17:04:53,724 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.7 pTM=0.351 ipTM=0.159 tol=3.78
2024-12-05 17:05:05,522 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.1 pTM=0.345 ipTM=0.151 tol=5.93
2024-12-05 17:05:17,268 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.4 pTM=0.349 ipTM=0.158 tol=6.1
2024-12-05 17:05:29,041 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.4 pTM=0.349 ipTM=0.159 tol=5.91
2024-12-05 17:05:40,844 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.8 pTM=0.35 ipTM=0.157 tol=6.31
2024-12-05 17:05:52,626 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.4 pTM=0.348 ipTM=0.161 tol=4.52
2024-12-05 17:06:04,409 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.6 pTM=0.346 ipTM=0.152 tol=5.43
2024-12-05 17:06:16,170 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.7 pTM=0.35 ipTM=0.156 tol=4.47
2024-12-05 17:06:27,948 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.8 pTM=0.344 ipTM=0.151 tol=4.5
2024-12-05 17:06:39,737 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.5 pTM=0.354 ipTM=0.162 tol=5.38
2024-12-05 17:06:51,526 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.3 pTM=0.346 ipTM=0.15 tol=5.25
2024-12-05 17:07:03,320 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.2 pTM=0.349 ipTM=0.152 tol=5.84
2024-12-05 17:07:15,104 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.4 pTM=0.344 ipTM=0.139 tol=4.73
2024-12-05 17:07:26,848 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63 pTM=0.349 ipTM=0.151 tol=7.5
2024-12-05 17:07:38,600 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.8 pTM=0.348 ipTM=0.155 tol=6.57
2024-12-05 17:07:50,343 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63 pTM=0.347 ipTM=0.153 tol=2.77
2024-12-05 17:08:02,124 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.3 pTM=0.347 ipTM=0.151 tol=2.46
2024-12-05 17:08:02,124 alphafold2_multimer_v3_model_4_seed_000 took 365.0s (30 recycles)
2024-12-05 17:08:14,302 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.9 pTM=0.39 ipTM=0.155
2024-12-05 17:08:26,114 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.5 pTM=0.373 ipTM=0.141 tol=8.66
2024-12-05 17:08:37,913 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.4 pTM=0.361 ipTM=0.158 tol=6.99
2024-12-05 17:08:49,716 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.4 pTM=0.345 ipTM=0.15 tol=9.59
2024-12-05 17:09:01,524 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.4 pTM=0.346 ipTM=0.148 tol=5.43
2024-12-05 17:09:13,340 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.4 pTM=0.34 ipTM=0.145 tol=6.82
2024-12-05 17:09:25,139 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.6 pTM=0.348 ipTM=0.146 tol=5.68
2024-12-05 17:09:36,913 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.3 pTM=0.344 ipTM=0.148 tol=4.01
2024-12-05 17:09:48,727 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.5 pTM=0.347 ipTM=0.151 tol=4.62
2024-12-05 17:10:00,548 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.7 pTM=0.349 ipTM=0.151 tol=4.8
2024-12-05 17:10:12,354 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.7 pTM=0.345 ipTM=0.146 tol=5.38
2024-12-05 17:10:24,159 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.6 pTM=0.346 ipTM=0.148 tol=3.04
2024-12-05 17:10:35,964 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.5 pTM=0.345 ipTM=0.144 tol=2.7
2024-12-05 17:10:47,771 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.4 pTM=0.346 ipTM=0.149 tol=4.02
2024-12-05 17:10:59,575 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.2 pTM=0.342 ipTM=0.15 tol=1.91
2024-12-05 17:11:11,386 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.2 pTM=0.345 ipTM=0.145 tol=2.96
2024-12-05 17:11:23,191 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.4 pTM=0.342 ipTM=0.148 tol=5.08
2024-12-05 17:11:34,971 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.6 pTM=0.339 ipTM=0.154 tol=5.08
2024-12-05 17:11:46,764 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.6 pTM=0.339 ipTM=0.144 tol=2.7
2024-12-05 17:11:58,567 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.8 pTM=0.342 ipTM=0.138 tol=2.33
2024-12-05 17:12:10,377 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.9 pTM=0.337 ipTM=0.154 tol=3.86
2024-12-05 17:12:22,182 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66 pTM=0.341 ipTM=0.146 tol=3.81
2024-12-05 17:12:33,989 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.8 pTM=0.339 ipTM=0.148 tol=1.45
2024-12-05 17:12:45,817 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.1 pTM=0.341 ipTM=0.155 tol=3.54
2024-12-05 17:12:57,637 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.9 pTM=0.341 ipTM=0.151 tol=1.87
2024-12-05 17:13:09,449 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.9 pTM=0.339 ipTM=0.151 tol=1.94
2024-12-05 17:13:21,263 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66 pTM=0.339 ipTM=0.15 tol=3.22
2024-12-05 17:13:33,080 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.9 pTM=0.34 ipTM=0.142 tol=3.34
2024-12-05 17:13:44,884 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.1 pTM=0.341 ipTM=0.15 tol=1.55
2024-12-05 17:13:56,702 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.8 pTM=0.34 ipTM=0.151 tol=1.45
2024-12-05 17:14:08,517 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.8 pTM=0.34 ipTM=0.145 tol=1.2
2024-12-05 17:14:08,518 alphafold2_multimer_v3_model_5_seed_000 took 366.0s (30 recycles)
2024-12-05 17:14:08,888 reranking models by 'multimer' metric
2024-12-05 17:14:12,867 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 17:15:17,126 Relaxation took 68.2s
2024-12-05 17:15:17,127 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.4 pTM=0.375 ipTM=0.149
2024-12-05 17:16:06,375 Relaxation took 49.2s
2024-12-05 17:16:06,375 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.3 pTM=0.347 ipTM=0.151
2024-12-05 17:16:54,070 Relaxation took 47.7s
2024-12-05 17:16:54,070 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.8 pTM=0.359 ipTM=0.147
2024-12-05 17:17:51,931 Relaxation took 57.9s
2024-12-05 17:17:51,931 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.4 pTM=0.36 ipTM=0.14
2024-12-05 17:18:53,763 Relaxation took 61.8s
2024-12-05 17:18:53,764 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.8 pTM=0.34 ipTM=0.145
2024-12-05 17:18:55,086 Done