2024-12-05 18:09:22,597 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 18:09:22,916 Running on GPU 2024-12-05 18:09:26,895 Found 6 citations for tools or databases 2024-12-05 18:09:26,895 Query 1/1: FBXL4_LRRC15 (length 1202) 2024-12-05 18:09:27,197 Sleeping for 6s. Reason: PENDING 2024-12-05 18:09:33,461 Sleeping for 8s. Reason: RUNNING 2024-12-05 18:09:41,719 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:09:47,969 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:09:55,240 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:10:02,506 Sleeping for 8s. Reason: RUNNING 2024-12-05 18:10:10,771 Sleeping for 9s. Reason: RUNNING 2024-12-05 18:10:20,032 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:10:26,296 Sleeping for 8s. Reason: RUNNING 2024-12-05 18:10:34,568 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:10:41,853 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:10:49,107 Sleeping for 10s. Reason: RUNNING 2024-12-05 18:10:59,367 Sleeping for 9s. Reason: RUNNING 2024-12-05 18:11:08,624 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:11:14,894 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:11:22,162 Sleeping for 9s. Reason: RUNNING 2024-12-05 18:11:31,429 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:11:37,695 Sleeping for 10s. Reason: RUNNING 2024-12-05 18:11:47,961 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:11:55,230 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:12:03,011 Sleeping for 6s. Reason: PENDING 2024-12-05 18:12:09,270 Sleeping for 5s. Reason: RUNNING 2024-12-05 18:12:14,540 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:12:21,964 Sleeping for 5s. Reason: RUNNING 2024-12-05 18:12:27,218 Sleeping for 5s. Reason: RUNNING 2024-12-05 18:12:32,478 Sleeping for 10s. Reason: RUNNING 2024-12-05 18:12:42,744 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:12:49,010 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:12:56,271 Sleeping for 10s. Reason: RUNNING 2024-12-05 18:13:06,548 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:13:12,817 Sleeping for 10s. Reason: RUNNING 2024-12-05 18:13:23,114 Sleeping for 8s. Reason: RUNNING 2024-12-05 18:13:31,369 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:13:37,656 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:13:44,915 Sleeping for 10s. Reason: RUNNING 2024-12-05 18:13:58,297 Setting max_seq=508, max_extra_seq=2048 2024-12-05 18:17:05,695 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=77.1 pTM=0.506 ipTM=0.199 2024-12-05 18:17:40,881 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=77.6 pTM=0.502 ipTM=0.166 tol=18.2 2024-12-05 18:18:16,146 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=76.8 pTM=0.506 ipTM=0.188 tol=13.6 2024-12-05 18:18:51,507 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77.5 pTM=0.506 ipTM=0.193 tol=7.16 2024-12-05 18:19:26,918 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.6 pTM=0.512 ipTM=0.211 tol=2.81 2024-12-05 18:20:02,352 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77.4 pTM=0.51 ipTM=0.206 tol=2.88 2024-12-05 18:20:37,834 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=77.2 pTM=0.509 ipTM=0.2 tol=6.22 2024-12-05 18:21:13,333 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=77.9 pTM=0.509 ipTM=0.193 tol=7.67 2024-12-05 18:21:48,810 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.1 pTM=0.508 ipTM=0.192 tol=8.02 2024-12-05 18:22:24,321 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=78 pTM=0.508 ipTM=0.179 tol=7.44 2024-12-05 18:22:59,805 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=77.2 pTM=0.506 ipTM=0.184 tol=10.3 2024-12-05 18:23:35,322 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.8 pTM=0.507 ipTM=0.182 tol=8.2 2024-12-05 18:24:10,803 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=77.4 pTM=0.506 ipTM=0.189 tol=9.96 2024-12-05 18:24:46,301 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=77.9 pTM=0.507 ipTM=0.185 tol=6.82 2024-12-05 18:25:21,756 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=77.4 pTM=0.509 ipTM=0.185 tol=4.41 2024-12-05 18:25:57,250 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=78 pTM=0.507 ipTM=0.19 tol=5.61 2024-12-05 18:26:32,683 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=77.4 pTM=0.509 ipTM=0.187 tol=6.25 2024-12-05 18:27:08,193 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=77.8 pTM=0.505 ipTM=0.188 tol=5.39 2024-12-05 18:27:43,684 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=77.5 pTM=0.506 ipTM=0.19 tol=2.74 2024-12-05 18:28:19,185 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=77.6 pTM=0.505 ipTM=0.179 tol=7.22 2024-12-05 18:28:54,634 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=77.1 pTM=0.505 ipTM=0.177 tol=3.98 2024-12-05 18:29:30,107 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=77.6 pTM=0.508 ipTM=0.183 tol=4.12 2024-12-05 18:30:05,620 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=76.9 pTM=0.506 ipTM=0.189 tol=9.34 2024-12-05 18:30:41,179 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=77.9 pTM=0.507 ipTM=0.191 tol=6.63 2024-12-05 18:31:16,692 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=77.1 pTM=0.508 ipTM=0.193 tol=9.98 2024-12-05 18:31:52,246 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=77.8 pTM=0.508 ipTM=0.186 tol=5.78 2024-12-05 18:32:27,750 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=77.1 pTM=0.507 ipTM=0.199 tol=8.41 2024-12-05 18:33:03,257 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=77.8 pTM=0.508 ipTM=0.197 tol=6.79 2024-12-05 18:33:38,722 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=77 pTM=0.508 ipTM=0.204 tol=4.59 2024-12-05 18:34:14,309 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=77.8 pTM=0.507 ipTM=0.186 tol=4.67 2024-12-05 18:34:49,869 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=76.9 pTM=0.507 ipTM=0.195 tol=6.03 2024-12-05 18:34:49,870 alphafold2_multimer_v3_model_1_seed_000 took 1243.7s (30 recycles) 2024-12-05 18:35:26,370 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=76.8 pTM=0.504 ipTM=0.2 2024-12-05 18:36:02,042 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=77.4 pTM=0.502 ipTM=0.19 tol=10.5 2024-12-05 18:36:37,714 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.8 pTM=0.504 ipTM=0.189 tol=5.25 2024-12-05 18:37:13,350 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78.1 pTM=0.507 ipTM=0.189 tol=2.48 2024-12-05 18:37:49,027 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.3 pTM=0.507 ipTM=0.182 tol=11 2024-12-05 18:38:24,681 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.6 pTM=0.51 ipTM=0.185 tol=6.8 2024-12-05 18:39:00,369 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.7 pTM=0.508 ipTM=0.177 tol=5.68 2024-12-05 18:39:36,056 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=78.7 pTM=0.51 ipTM=0.184 tol=6.56 2024-12-05 18:40:11,749 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=78.8 pTM=0.514 ipTM=0.2 tol=5.7 2024-12-05 18:40:47,447 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=78.8 pTM=0.513 ipTM=0.206 tol=5.86 2024-12-05 18:41:23,119 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79 pTM=0.515 ipTM=0.187 tol=4.33 2024-12-05 18:41:58,851 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=78.5 pTM=0.512 ipTM=0.184 tol=4.69 2024-12-05 18:42:34,534 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78.9 pTM=0.513 ipTM=0.181 tol=7.01 2024-12-05 18:43:10,240 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.8 pTM=0.513 ipTM=0.185 tol=4.4 2024-12-05 18:43:45,910 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=79 pTM=0.513 ipTM=0.217 tol=3.32 2024-12-05 18:44:21,597 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.8 pTM=0.513 ipTM=0.189 tol=4.06 2024-12-05 18:44:57,306 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=79.1 pTM=0.513 ipTM=0.179 tol=4.9 2024-12-05 18:45:33,000 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=79 pTM=0.512 ipTM=0.182 tol=4.11 2024-12-05 18:46:08,683 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.9 pTM=0.514 ipTM=0.184 tol=4.41 2024-12-05 18:46:44,382 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=78.9 pTM=0.512 ipTM=0.184 tol=4.3 2024-12-05 18:47:20,051 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=79 pTM=0.513 ipTM=0.181 tol=4.78 2024-12-05 18:47:55,723 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.9 pTM=0.513 ipTM=0.182 tol=4.14 2024-12-05 18:48:31,374 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=79.1 pTM=0.514 ipTM=0.185 tol=3.04 2024-12-05 18:49:07,059 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.9 pTM=0.514 ipTM=0.188 tol=2.66 2024-12-05 18:49:42,726 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=79 pTM=0.513 ipTM=0.18 tol=3.38 2024-12-05 18:50:18,403 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.8 pTM=0.513 ipTM=0.186 tol=3.89 2024-12-05 18:50:54,127 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.9 pTM=0.515 ipTM=0.21 tol=3.48 2024-12-05 18:51:29,820 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.9 pTM=0.514 ipTM=0.237 tol=3 2024-12-05 18:52:05,504 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=79.2 pTM=0.517 ipTM=0.276 tol=3.92 2024-12-05 18:52:41,158 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=79.1 pTM=0.514 ipTM=0.258 tol=3.78 2024-12-05 18:53:16,822 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=79.1 pTM=0.513 ipTM=0.209 tol=2.52 2024-12-05 18:53:16,823 alphafold2_multimer_v3_model_2_seed_000 took 1106.1s (30 recycles) 2024-12-05 18:53:53,279 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.8 pTM=0.514 ipTM=0.189 2024-12-05 18:54:28,822 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.9 pTM=0.522 ipTM=0.198 tol=13.8 2024-12-05 18:55:04,435 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=77.2 pTM=0.526 ipTM=0.206 tol=7.43 2024-12-05 18:55:39,989 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77 pTM=0.53 ipTM=0.276 tol=5.32 2024-12-05 18:56:15,548 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=76.9 pTM=0.527 ipTM=0.268 tol=3.32 2024-12-05 18:56:51,099 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.9 pTM=0.523 ipTM=0.248 tol=3.68 2024-12-05 18:57:26,686 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=77.2 pTM=0.526 ipTM=0.208 tol=2.92 2024-12-05 18:58:02,319 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=77.3 pTM=0.527 ipTM=0.202 tol=2.76 2024-12-05 18:58:37,933 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77.2 pTM=0.525 ipTM=0.203 tol=1.38 2024-12-05 18:59:13,558 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=77.1 pTM=0.522 ipTM=0.2 tol=1.47 2024-12-05 18:59:49,152 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=77.1 pTM=0.527 ipTM=0.204 tol=3.27 2024-12-05 19:00:24,725 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.4 pTM=0.522 ipTM=0.195 tol=2.67 2024-12-05 19:01:00,351 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77.7 pTM=0.516 ipTM=0.195 tol=7.74 2024-12-05 19:01:35,936 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.7 pTM=0.518 ipTM=0.179 tol=5.7 2024-12-05 19:02:11,554 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.7 pTM=0.52 ipTM=0.18 tol=3.89 2024-12-05 19:02:47,186 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.7 pTM=0.52 ipTM=0.186 tol=5.84 2024-12-05 19:03:22,817 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.8 pTM=0.517 ipTM=0.189 tol=5.67 2024-12-05 19:03:58,457 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77.8 pTM=0.518 ipTM=0.176 tol=5.43 2024-12-05 19:04:34,094 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=77.8 pTM=0.521 ipTM=0.197 tol=5.02 2024-12-05 19:05:09,703 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.6 pTM=0.518 ipTM=0.174 tol=4.38 2024-12-05 19:05:45,333 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.7 pTM=0.518 ipTM=0.176 tol=3.59 2024-12-05 19:06:20,955 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.6 pTM=0.521 ipTM=0.183 tol=3.74 2024-12-05 19:06:56,588 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.6 pTM=0.527 ipTM=0.199 tol=2.68 2024-12-05 19:07:32,195 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.7 pTM=0.523 ipTM=0.188 tol=2.04 2024-12-05 19:08:07,763 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.4 pTM=0.525 ipTM=0.195 tol=1.55 2024-12-05 19:08:43,340 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.5 pTM=0.524 ipTM=0.192 tol=4.72 2024-12-05 19:09:18,896 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.4 pTM=0.528 ipTM=0.215 tol=4.95 2024-12-05 19:09:54,378 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.4 pTM=0.525 ipTM=0.213 tol=2.72 2024-12-05 19:10:29,913 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.5 pTM=0.525 ipTM=0.207 tol=1.97 2024-12-05 19:11:05,469 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.6 pTM=0.521 ipTM=0.188 tol=1.01 2024-12-05 19:11:41,021 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.5 pTM=0.521 ipTM=0.184 tol=2.91 2024-12-05 19:11:41,022 alphafold2_multimer_v3_model_3_seed_000 took 1103.3s (30 recycles) 2024-12-05 19:12:17,434 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76.2 pTM=0.509 ipTM=0.202 2024-12-05 19:12:53,078 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.1 pTM=0.51 ipTM=0.192 tol=16 2024-12-05 19:13:28,768 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.4 pTM=0.508 ipTM=0.178 tol=5.53 2024-12-05 19:14:04,434 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=77.6 pTM=0.514 ipTM=0.267 tol=3.71 2024-12-05 19:14:40,086 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=77.6 pTM=0.515 ipTM=0.258 tol=7.91 2024-12-05 19:15:15,764 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.6 pTM=0.514 ipTM=0.273 tol=6.12 2024-12-05 19:15:51,420 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=77.4 pTM=0.521 ipTM=0.274 tol=3.91 2024-12-05 19:16:27,160 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.7 pTM=0.516 ipTM=0.271 tol=5.77 2024-12-05 19:17:02,834 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77.6 pTM=0.516 ipTM=0.274 tol=7.47 2024-12-05 19:17:38,536 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.8 pTM=0.516 ipTM=0.27 tol=6.95 2024-12-05 19:18:14,256 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=78 pTM=0.517 ipTM=0.267 tol=5.87 2024-12-05 19:18:49,967 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.8 pTM=0.514 ipTM=0.274 tol=5.72 2024-12-05 19:19:25,682 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.9 pTM=0.517 ipTM=0.284 tol=5.81 2024-12-05 19:20:01,381 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.9 pTM=0.517 ipTM=0.291 tol=6.24 2024-12-05 19:20:37,056 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78 pTM=0.516 ipTM=0.304 tol=5.68 2024-12-05 19:21:12,708 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=77.9 pTM=0.517 ipTM=0.3 tol=6.17 2024-12-05 19:21:48,366 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.1 pTM=0.515 ipTM=0.299 tol=5.57 2024-12-05 19:22:24,022 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.9 pTM=0.516 ipTM=0.279 tol=5.23 2024-12-05 19:22:59,734 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.9 pTM=0.516 ipTM=0.288 tol=5.87 2024-12-05 19:23:35,457 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=78 pTM=0.515 ipTM=0.281 tol=5.11 2024-12-05 19:24:11,143 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.9 pTM=0.515 ipTM=0.267 tol=3.89 2024-12-05 19:24:46,816 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.9 pTM=0.518 ipTM=0.285 tol=5.27 2024-12-05 19:25:22,454 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.6 pTM=0.518 ipTM=0.279 tol=5.59 2024-12-05 19:25:58,083 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78 pTM=0.515 ipTM=0.275 tol=6.27 2024-12-05 19:26:33,676 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.5 pTM=0.521 ipTM=0.255 tol=5.96 2024-12-05 19:27:09,303 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.9 pTM=0.517 ipTM=0.265 tol=4.65 2024-12-05 19:27:44,942 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.6 pTM=0.521 ipTM=0.292 tol=6.12 2024-12-05 19:28:20,596 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78 pTM=0.517 ipTM=0.295 tol=6.72 2024-12-05 19:28:56,278 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.9 pTM=0.518 ipTM=0.304 tol=5.9 2024-12-05 19:29:31,959 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=78.1 pTM=0.516 ipTM=0.295 tol=6.08 2024-12-05 19:30:07,608 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.8 pTM=0.517 ipTM=0.294 tol=5.7 2024-12-05 19:30:07,610 alphafold2_multimer_v3_model_4_seed_000 took 1105.7s (30 recycles) 2024-12-05 19:30:44,061 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.9 pTM=0.502 ipTM=0.17 2024-12-05 19:31:19,670 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=76.4 pTM=0.511 ipTM=0.185 tol=11.2 2024-12-05 19:31:55,293 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76.8 pTM=0.504 ipTM=0.165 tol=5.16 2024-12-05 19:32:30,880 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=77.1 pTM=0.512 ipTM=0.181 tol=4.96 2024-12-05 19:33:06,465 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=77.1 pTM=0.51 ipTM=0.18 tol=3.05 2024-12-05 19:33:42,041 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=77.2 pTM=0.511 ipTM=0.178 tol=3.6 2024-12-05 19:34:17,641 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=77.2 pTM=0.511 ipTM=0.177 tol=6.04 2024-12-05 19:34:53,234 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=77.2 pTM=0.513 ipTM=0.183 tol=2.32 2024-12-05 19:35:28,841 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=77.2 pTM=0.511 ipTM=0.181 tol=3.94 2024-12-05 19:36:04,420 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=77.4 pTM=0.515 ipTM=0.187 tol=2.68 2024-12-05 19:36:39,988 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=77.2 pTM=0.514 ipTM=0.186 tol=2.64 2024-12-05 19:37:15,581 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=77.2 pTM=0.514 ipTM=0.181 tol=6.5 2024-12-05 19:37:51,197 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=77.3 pTM=0.517 ipTM=0.186 tol=3.08 2024-12-05 19:38:26,840 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=77.4 pTM=0.513 ipTM=0.174 tol=2.93 2024-12-05 19:39:02,475 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=77.4 pTM=0.514 ipTM=0.18 tol=1.87 2024-12-05 19:39:38,100 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=77.4 pTM=0.513 ipTM=0.175 tol=1.65 2024-12-05 19:40:13,717 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=77.4 pTM=0.511 ipTM=0.169 tol=2.3 2024-12-05 19:40:49,335 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=77.5 pTM=0.516 ipTM=0.181 tol=2.59 2024-12-05 19:41:24,994 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=77.4 pTM=0.512 ipTM=0.176 tol=4.52 2024-12-05 19:42:00,606 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=77.3 pTM=0.513 ipTM=0.179 tol=4.04 2024-12-05 19:42:36,240 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=77.2 pTM=0.512 ipTM=0.176 tol=1.63 2024-12-05 19:43:11,854 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=77.3 pTM=0.512 ipTM=0.173 tol=5.66 2024-12-05 19:43:47,467 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=77.4 pTM=0.515 ipTM=0.182 tol=1.74 2024-12-05 19:44:23,120 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=77.4 pTM=0.514 ipTM=0.178 tol=4.03 2024-12-05 19:44:58,731 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=77.2 pTM=0.516 ipTM=0.187 tol=3.06 2024-12-05 19:45:34,349 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=77.2 pTM=0.513 ipTM=0.181 tol=4.48 2024-12-05 19:46:09,966 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=77.3 pTM=0.514 ipTM=0.183 tol=3.62 2024-12-05 19:46:45,572 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=77.3 pTM=0.512 ipTM=0.178 tol=4.72 2024-12-05 19:47:21,176 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=77.3 pTM=0.515 ipTM=0.181 tol=4.98 2024-12-05 19:47:56,813 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=77.4 pTM=0.512 ipTM=0.174 tol=3.8 2024-12-05 19:48:32,442 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=77.4 pTM=0.514 ipTM=0.177 tol=2.72 2024-12-05 19:48:32,443 alphafold2_multimer_v3_model_5_seed_000 took 1104.0s (30 recycles) 2024-12-05 19:48:33,318 reranking models by 'multimer' metric 2024-12-05 19:48:34,599 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-05 19:50:12,718 Relaxation took 99.4s 2024-12-05 19:50:12,718 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.8 pTM=0.517 ipTM=0.294 2024-12-05 19:52:22,685 Relaxation took 130.0s 2024-12-05 19:52:22,686 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=79.1 pTM=0.513 ipTM=0.209 2024-12-05 19:54:25,096 Relaxation took 122.4s 2024-12-05 19:54:25,096 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=76.9 pTM=0.507 ipTM=0.195 2024-12-05 19:56:08,153 Relaxation took 103.1s 2024-12-05 19:56:08,153 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.5 pTM=0.521 ipTM=0.184 2024-12-05 19:57:37,863 Relaxation took 89.7s 2024-12-05 19:57:37,863 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=77.4 pTM=0.514 ipTM=0.177 2024-12-05 19:57:40,316 Done