2024-12-05 18:57:18,558 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 18:57:18,857 Running on GPU 2024-12-05 18:57:22,716 Found 6 citations for tools or databases 2024-12-05 18:57:22,716 Query 1/1: FBXL5_GCA (length 908) 2024-12-05 18:57:23,020 Sleeping for 7s. Reason: PENDING 2024-12-05 18:57:30,280 Sleeping for 5s. Reason: RUNNING 2024-12-05 18:57:35,537 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:57:41,968 Sleeping for 8s. Reason: RUNNING 2024-12-05 18:57:50,236 Sleeping for 10s. Reason: RUNNING 2024-12-05 18:58:00,496 Sleeping for 9s. Reason: RUNNING 2024-12-05 18:58:09,764 Sleeping for 9s. Reason: RUNNING 2024-12-05 18:58:19,036 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:58:26,306 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:58:33,576 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:58:40,834 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:58:47,099 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:58:53,362 Sleeping for 10s. Reason: RUNNING 2024-12-05 18:59:03,617 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:59:10,872 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:59:18,128 Sleeping for 6s. Reason: RUNNING 2024-12-05 18:59:26,224 Sleeping for 5s. Reason: PENDING 2024-12-05 18:59:31,479 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:59:38,743 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:59:46,006 Sleeping for 7s. Reason: RUNNING 2024-12-05 18:59:53,258 Sleeping for 5s. Reason: RUNNING 2024-12-05 18:59:58,513 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:00:08,769 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:00:17,034 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:00:26,302 Sleeping for 5s. Reason: RUNNING 2024-12-05 19:00:34,531 Setting max_seq=508, max_extra_seq=2048 2024-12-05 19:03:00,040 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.1 pTM=0.399 ipTM=0.184 2024-12-05 19:03:17,115 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.8 pTM=0.401 ipTM=0.173 tol=10 2024-12-05 19:03:34,281 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.6 pTM=0.4 ipTM=0.205 tol=5.19 2024-12-05 19:03:51,475 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.5 pTM=0.401 ipTM=0.194 tol=3.65 2024-12-05 19:04:08,702 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58 pTM=0.401 ipTM=0.192 tol=3.09 2024-12-05 19:04:25,950 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.3 pTM=0.401 ipTM=0.193 tol=2.76 2024-12-05 19:04:43,232 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.3 pTM=0.4 ipTM=0.199 tol=3.62 2024-12-05 19:05:00,544 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.9 pTM=0.398 ipTM=0.193 tol=3.77 2024-12-05 19:05:17,867 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.2 pTM=0.399 ipTM=0.195 tol=2.3 2024-12-05 19:05:35,173 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.8 pTM=0.399 ipTM=0.193 tol=2.44 2024-12-05 19:05:52,510 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.4 pTM=0.4 ipTM=0.19 tol=1.54 2024-12-05 19:06:09,840 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.2 pTM=0.4 ipTM=0.193 tol=2.25 2024-12-05 19:06:27,182 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58 pTM=0.4 ipTM=0.184 tol=1.34 2024-12-05 19:06:44,523 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.5 pTM=0.398 ipTM=0.181 tol=1.82 2024-12-05 19:07:01,873 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58 pTM=0.401 ipTM=0.182 tol=1.78 2024-12-05 19:07:19,223 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.5 pTM=0.396 ipTM=0.181 tol=2.01 2024-12-05 19:07:36,565 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58 pTM=0.4 ipTM=0.186 tol=2.31 2024-12-05 19:07:53,928 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.6 pTM=0.398 ipTM=0.193 tol=2.38 2024-12-05 19:08:11,280 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.2 pTM=0.4 ipTM=0.194 tol=1.32 2024-12-05 19:08:28,632 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.5 pTM=0.396 ipTM=0.193 tol=1.3 2024-12-05 19:08:45,960 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.2 pTM=0.398 ipTM=0.191 tol=2.79 2024-12-05 19:09:03,291 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.6 pTM=0.397 ipTM=0.186 tol=1.97 2024-12-05 19:09:20,639 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.2 pTM=0.4 ipTM=0.183 tol=2.07 2024-12-05 19:09:37,966 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58.6 pTM=0.397 ipTM=0.187 tol=2.25 2024-12-05 19:09:55,299 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58.1 pTM=0.396 ipTM=0.197 tol=1.96 2024-12-05 19:10:12,631 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.1 pTM=0.396 ipTM=0.201 tol=2.84 2024-12-05 19:10:29,966 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58.1 pTM=0.399 ipTM=0.191 tol=2.05 2024-12-05 19:10:47,291 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.1 pTM=0.397 ipTM=0.185 tol=2.79 2024-12-05 19:11:04,624 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=57.9 pTM=0.396 ipTM=0.188 tol=2.79 2024-12-05 19:11:21,967 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.5 pTM=0.398 ipTM=0.184 tol=3.23 2024-12-05 19:11:39,307 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.5 pTM=0.398 ipTM=0.192 tol=1.66 2024-12-05 19:11:39,308 alphafold2_multimer_v3_model_1_seed_000 took 659.6s (30 recycles) 2024-12-05 19:11:57,165 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.3 pTM=0.403 ipTM=0.181 2024-12-05 19:12:14,543 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.7 pTM=0.406 ipTM=0.205 tol=5.9 2024-12-05 19:12:31,936 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.6 pTM=0.402 ipTM=0.19 tol=5.19 2024-12-05 19:12:49,328 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.4 pTM=0.406 ipTM=0.165 tol=4.27 2024-12-05 19:13:06,722 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.2 pTM=0.404 ipTM=0.16 tol=4.58 2024-12-05 19:13:24,116 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.2 pTM=0.404 ipTM=0.15 tol=2.26 2024-12-05 19:13:41,522 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.4 pTM=0.401 ipTM=0.155 tol=2.63 2024-12-05 19:13:58,911 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.5 pTM=0.402 ipTM=0.149 tol=3.85 2024-12-05 19:14:16,306 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.7 pTM=0.402 ipTM=0.162 tol=3.22 2024-12-05 19:14:33,694 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.4 pTM=0.401 ipTM=0.148 tol=4.1 2024-12-05 19:14:51,094 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.6 pTM=0.4 ipTM=0.148 tol=3.62 2024-12-05 19:15:08,486 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.7 pTM=0.403 ipTM=0.148 tol=2.81 2024-12-05 19:15:25,877 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.4 pTM=0.402 ipTM=0.15 tol=2.77 2024-12-05 19:15:43,284 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.4 pTM=0.401 ipTM=0.148 tol=1.99 2024-12-05 19:16:00,703 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.6 pTM=0.4 ipTM=0.146 tol=6.89 2024-12-05 19:16:18,131 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.6 pTM=0.398 ipTM=0.143 tol=5.84 2024-12-05 19:16:35,567 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.7 pTM=0.4 ipTM=0.172 tol=3.2 2024-12-05 19:16:52,999 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.9 pTM=0.401 ipTM=0.147 tol=2.73 2024-12-05 19:17:10,418 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.2 pTM=0.399 ipTM=0.156 tol=3.34 2024-12-05 19:17:27,846 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.6 pTM=0.398 ipTM=0.146 tol=3.31 2024-12-05 19:17:45,268 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.8 pTM=0.399 ipTM=0.155 tol=3.49 2024-12-05 19:18:02,689 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.1 pTM=0.401 ipTM=0.148 tol=2.24 2024-12-05 19:18:20,100 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62 pTM=0.401 ipTM=0.164 tol=2.44 2024-12-05 19:18:37,519 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.3 pTM=0.4 ipTM=0.156 tol=3.87 2024-12-05 19:18:54,938 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.8 pTM=0.397 ipTM=0.148 tol=2.82 2024-12-05 19:19:12,354 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.8 pTM=0.399 ipTM=0.147 tol=2.69 2024-12-05 19:19:29,771 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.1 pTM=0.401 ipTM=0.167 tol=2.52 2024-12-05 19:19:47,178 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.1 pTM=0.399 ipTM=0.153 tol=1.86 2024-12-05 19:20:04,576 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.2 pTM=0.4 ipTM=0.161 tol=1.54 2024-12-05 19:20:21,969 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.2 pTM=0.399 ipTM=0.155 tol=2.57 2024-12-05 19:20:39,359 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62 pTM=0.398 ipTM=0.168 tol=2.03 2024-12-05 19:20:39,360 alphafold2_multimer_v3_model_2_seed_000 took 539.5s (30 recycles) 2024-12-05 19:20:57,277 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.8 pTM=0.403 ipTM=0.152 2024-12-05 19:21:14,677 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57 pTM=0.388 ipTM=0.146 tol=13.2 2024-12-05 19:21:32,061 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.8 pTM=0.39 ipTM=0.149 tol=7.1 2024-12-05 19:21:49,434 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.4 pTM=0.39 ipTM=0.15 tol=5.27 2024-12-05 19:22:06,815 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.2 pTM=0.392 ipTM=0.135 tol=2.49 2024-12-05 19:22:24,199 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.7 pTM=0.396 ipTM=0.139 tol=2.65 2024-12-05 19:22:41,601 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.6 pTM=0.396 ipTM=0.139 tol=1.83 2024-12-05 19:22:59,009 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.6 pTM=0.394 ipTM=0.135 tol=1.88 2024-12-05 19:23:16,418 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.5 pTM=0.394 ipTM=0.139 tol=2.26 2024-12-05 19:23:33,830 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.5 pTM=0.394 ipTM=0.143 tol=2.86 2024-12-05 19:23:51,245 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.5 pTM=0.392 ipTM=0.139 tol=5.59 2024-12-05 19:24:08,660 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.6 pTM=0.392 ipTM=0.136 tol=5.92 2024-12-05 19:24:26,075 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.3 pTM=0.391 ipTM=0.162 tol=7.91 2024-12-05 19:24:43,454 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.4 pTM=0.391 ipTM=0.131 tol=10.2 2024-12-05 19:25:00,843 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.2 pTM=0.389 ipTM=0.131 tol=4.82 2024-12-05 19:25:18,210 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.2 pTM=0.389 ipTM=0.136 tol=3.06 2024-12-05 19:25:35,593 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.4 pTM=0.388 ipTM=0.147 tol=5.48 2024-12-05 19:25:52,961 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.6 pTM=0.389 ipTM=0.142 tol=6.23 2024-12-05 19:26:10,352 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57 pTM=0.389 ipTM=0.164 tol=4.59 2024-12-05 19:26:27,712 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.3 pTM=0.389 ipTM=0.143 tol=3.76 2024-12-05 19:26:45,077 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.1 pTM=0.387 ipTM=0.139 tol=3.09 2024-12-05 19:27:02,438 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.3 pTM=0.386 ipTM=0.137 tol=2.51 2024-12-05 19:27:19,820 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.6 pTM=0.387 ipTM=0.138 tol=2.52 2024-12-05 19:27:37,203 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.8 pTM=0.388 ipTM=0.128 tol=3.75 2024-12-05 19:27:54,593 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.5 pTM=0.386 ipTM=0.132 tol=2.42 2024-12-05 19:28:11,972 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.6 pTM=0.39 ipTM=0.141 tol=3.47 2024-12-05 19:28:29,359 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.9 pTM=0.391 ipTM=0.138 tol=3.51 2024-12-05 19:28:46,735 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.7 pTM=0.391 ipTM=0.139 tol=4.26 2024-12-05 19:29:04,123 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.9 pTM=0.392 ipTM=0.157 tol=3.4 2024-12-05 19:29:21,501 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.2 pTM=0.395 ipTM=0.148 tol=2.44 2024-12-05 19:29:38,874 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.9 pTM=0.393 ipTM=0.16 tol=2.45 2024-12-05 19:29:38,875 alphafold2_multimer_v3_model_3_seed_000 took 539.0s (30 recycles) 2024-12-05 19:29:56,702 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.5 pTM=0.412 ipTM=0.181 2024-12-05 19:30:14,053 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.2 pTM=0.404 ipTM=0.157 tol=13 2024-12-05 19:30:31,397 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.5 pTM=0.404 ipTM=0.16 tol=6.5 2024-12-05 19:30:48,755 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59 pTM=0.404 ipTM=0.162 tol=5.05 2024-12-05 19:31:06,132 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.6 pTM=0.405 ipTM=0.159 tol=6.16 2024-12-05 19:31:23,489 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.1 pTM=0.407 ipTM=0.161 tol=5.37 2024-12-05 19:31:40,855 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.1 pTM=0.407 ipTM=0.173 tol=3.28 2024-12-05 19:31:58,212 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.2 pTM=0.408 ipTM=0.173 tol=3.74 2024-12-05 19:32:15,581 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.1 pTM=0.411 ipTM=0.177 tol=4.79 2024-12-05 19:32:32,937 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59 pTM=0.408 ipTM=0.177 tol=3.08 2024-12-05 19:32:50,288 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.9 pTM=0.409 ipTM=0.191 tol=2.58 2024-12-05 19:33:07,644 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.3 pTM=0.413 ipTM=0.183 tol=2.35 2024-12-05 19:33:25,015 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59 pTM=0.412 ipTM=0.186 tol=3.01 2024-12-05 19:33:42,395 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59 pTM=0.412 ipTM=0.188 tol=2.13 2024-12-05 19:33:59,768 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59 pTM=0.412 ipTM=0.189 tol=1.89 2024-12-05 19:34:17,138 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.2 pTM=0.41 ipTM=0.185 tol=2.05 2024-12-05 19:34:34,512 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.1 pTM=0.412 ipTM=0.186 tol=1.91 2024-12-05 19:34:51,881 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59 pTM=0.413 ipTM=0.189 tol=2.5 2024-12-05 19:35:09,249 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.8 pTM=0.41 ipTM=0.192 tol=2.4 2024-12-05 19:35:26,617 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.9 pTM=0.411 ipTM=0.192 tol=1.88 2024-12-05 19:35:43,992 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.1 pTM=0.413 ipTM=0.194 tol=1.96 2024-12-05 19:36:01,354 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.3 pTM=0.412 ipTM=0.192 tol=4.89 2024-12-05 19:36:18,720 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.2 pTM=0.414 ipTM=0.194 tol=4.53 2024-12-05 19:36:36,078 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.2 pTM=0.413 ipTM=0.192 tol=2.28 2024-12-05 19:36:53,428 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.7 pTM=0.412 ipTM=0.193 tol=2.22 2024-12-05 19:37:10,781 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.9 pTM=0.412 ipTM=0.191 tol=2.57 2024-12-05 19:37:28,130 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.8 pTM=0.413 ipTM=0.193 tol=2 2024-12-05 19:37:45,492 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.8 pTM=0.412 ipTM=0.191 tol=1.89 2024-12-05 19:38:02,850 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.8 pTM=0.412 ipTM=0.192 tol=1.72 2024-12-05 19:38:20,208 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59 pTM=0.41 ipTM=0.187 tol=1.59 2024-12-05 19:38:37,562 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.4 pTM=0.411 ipTM=0.188 tol=1.5 2024-12-05 19:38:37,563 alphafold2_multimer_v3_model_4_seed_000 took 538.2s (30 recycles) 2024-12-05 19:38:55,440 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59 pTM=0.416 ipTM=0.149 2024-12-05 19:39:12,839 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.1 pTM=0.408 ipTM=0.126 tol=7.38 2024-12-05 19:39:30,261 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.5 pTM=0.402 ipTM=0.143 tol=7.62 2024-12-05 19:39:47,694 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60 pTM=0.406 ipTM=0.155 tol=6.61 2024-12-05 19:40:05,124 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.6 pTM=0.399 ipTM=0.146 tol=8.72 2024-12-05 19:40:22,552 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60 pTM=0.402 ipTM=0.15 tol=5.62 2024-12-05 19:40:39,979 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.6 pTM=0.403 ipTM=0.152 tol=3.79 2024-12-05 19:40:57,393 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.4 pTM=0.403 ipTM=0.156 tol=3.42 2024-12-05 19:41:14,799 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.3 pTM=0.403 ipTM=0.158 tol=1.81 2024-12-05 19:41:32,217 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.6 pTM=0.402 ipTM=0.151 tol=2.34 2024-12-05 19:41:49,640 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.5 pTM=0.403 ipTM=0.156 tol=2.01 2024-12-05 19:42:07,069 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.6 pTM=0.405 ipTM=0.157 tol=1.99 2024-12-05 19:42:24,488 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.1 pTM=0.402 ipTM=0.152 tol=1.52 2024-12-05 19:42:41,907 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.1 pTM=0.401 ipTM=0.154 tol=2.09 2024-12-05 19:42:59,317 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.2 pTM=0.403 ipTM=0.159 tol=1.68 2024-12-05 19:43:16,738 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.3 pTM=0.402 ipTM=0.155 tol=3.57 2024-12-05 19:43:34,168 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.4 pTM=0.403 ipTM=0.155 tol=2.52 2024-12-05 19:43:51,599 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.7 pTM=0.403 ipTM=0.152 tol=2.43 2024-12-05 19:44:09,029 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.5 pTM=0.402 ipTM=0.152 tol=2.44 2024-12-05 19:44:26,458 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.8 pTM=0.403 ipTM=0.154 tol=1.56 2024-12-05 19:44:43,900 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.5 pTM=0.402 ipTM=0.154 tol=2.24 2024-12-05 19:45:01,343 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.7 pTM=0.401 ipTM=0.149 tol=2.86 2024-12-05 19:45:18,774 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.1 pTM=0.404 ipTM=0.151 tol=2.32 2024-12-05 19:45:36,214 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.9 pTM=0.402 ipTM=0.148 tol=2.6 2024-12-05 19:45:53,648 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.6 pTM=0.401 ipTM=0.148 tol=2.24 2024-12-05 19:46:11,081 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.6 pTM=0.402 ipTM=0.151 tol=2.58 2024-12-05 19:46:28,498 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.5 pTM=0.402 ipTM=0.151 tol=1.29 2024-12-05 19:46:45,930 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.5 pTM=0.402 ipTM=0.153 tol=2.83 2024-12-05 19:47:03,362 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.6 pTM=0.403 ipTM=0.152 tol=2.9 2024-12-05 19:47:20,785 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.9 pTM=0.402 ipTM=0.153 tol=1.7 2024-12-05 19:47:38,216 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.9 pTM=0.401 ipTM=0.147 tol=1.9 2024-12-05 19:47:38,216 alphafold2_multimer_v3_model_5_seed_000 took 540.1s (30 recycles) 2024-12-05 19:47:38,734 reranking models by 'multimer' metric 2024-12-05 19:47:42,134 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-05 19:49:18,928 Relaxation took 100.2s 2024-12-05 19:49:18,928 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.5 pTM=0.398 ipTM=0.192 2024-12-05 19:50:36,051 Relaxation took 77.1s 2024-12-05 19:50:36,051 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.4 pTM=0.411 ipTM=0.188 2024-12-05 19:51:29,831 Relaxation took 53.8s 2024-12-05 19:51:29,832 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62 pTM=0.398 ipTM=0.168 2024-12-05 19:53:05,175 Relaxation took 95.3s 2024-12-05 19:53:05,176 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.9 pTM=0.393 ipTM=0.16 2024-12-05 19:54:21,213 Relaxation took 76.0s 2024-12-05 19:54:21,213 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.9 pTM=0.401 ipTM=0.147 2024-12-05 19:54:22,964 Done