2024-12-05 19:09:58,320 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 19:09:58,633 Running on GPU 2024-12-05 19:10:02,140 Found 6 citations for tools or databases 2024-12-05 19:10:02,140 Query 1/1: FBXO10_PDE6D (length 1106) 2024-12-05 19:10:02,454 Sleeping for 5s. Reason: PENDING 2024-12-05 19:10:07,724 Sleeping for 5s. Reason: RUNNING 2024-12-05 19:10:13,003 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:10:22,266 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:10:32,538 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:10:40,816 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:10:51,088 Sleeping for 5s. Reason: RUNNING 2024-12-05 19:10:56,365 Sleeping for 7s. Reason: RUNNING 2024-12-05 19:11:03,623 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:11:12,887 Sleeping for 6s. Reason: RUNNING 2024-12-05 19:11:19,148 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:11:29,418 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:11:37,681 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:11:45,956 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:11:55,219 Sleeping for 7s. Reason: RUNNING 2024-12-05 19:12:03,912 Sleeping for 5s. Reason: PENDING 2024-12-05 19:12:09,181 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:12:17,461 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:12:27,724 Sleeping for 6s. Reason: RUNNING 2024-12-05 19:12:33,981 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:12:43,251 Sleeping for 7s. Reason: RUNNING 2024-12-05 19:12:50,522 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:12:58,786 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:13:07,045 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:13:15,304 Sleeping for 7s. Reason: RUNNING 2024-12-05 19:13:25,050 Setting max_seq=508, max_extra_seq=2048 2024-12-05 19:16:18,137 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.4 pTM=0.674 ipTM=0.264 2024-12-05 19:16:45,288 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74 pTM=0.686 ipTM=0.357 tol=5.43 2024-12-05 19:17:12,523 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.2 pTM=0.683 ipTM=0.663 tol=2.84 2024-12-05 19:17:39,822 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.3 pTM=0.683 ipTM=0.659 tol=6.58 2024-12-05 19:18:07,149 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74 pTM=0.679 ipTM=0.638 tol=7.37 2024-12-05 19:18:34,514 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.5 pTM=0.683 ipTM=0.649 tol=2.97 2024-12-05 19:19:01,881 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.9 pTM=0.68 ipTM=0.599 tol=1.8 2024-12-05 19:19:29,251 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=74.2 pTM=0.683 ipTM=0.589 tol=1.59 2024-12-05 19:19:56,650 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74.4 pTM=0.685 ipTM=0.605 tol=1.83 2024-12-05 19:20:24,038 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.5 pTM=0.687 ipTM=0.582 tol=2.09 2024-12-05 19:20:51,408 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.4 pTM=0.685 ipTM=0.525 tol=1.65 2024-12-05 19:21:18,814 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.6 pTM=0.687 ipTM=0.558 tol=0.925 2024-12-05 19:21:46,200 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.6 pTM=0.686 ipTM=0.585 tol=1.37 2024-12-05 19:22:13,573 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74.3 pTM=0.682 ipTM=0.601 tol=1.89 2024-12-05 19:22:40,968 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74.6 pTM=0.686 ipTM=0.583 tol=1.16 2024-12-05 19:23:08,357 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.2 pTM=0.684 ipTM=0.597 tol=1.06 2024-12-05 19:23:35,774 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74.7 pTM=0.685 ipTM=0.602 tol=1.13 2024-12-05 19:24:03,174 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.6 pTM=0.688 ipTM=0.6 tol=1.23 2024-12-05 19:24:30,584 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.6 pTM=0.687 ipTM=0.59 tol=0.728 2024-12-05 19:24:57,975 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.4 pTM=0.686 ipTM=0.564 tol=0.571 2024-12-05 19:25:25,373 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.4 pTM=0.684 ipTM=0.566 tol=0.986 2024-12-05 19:25:52,753 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.4 pTM=0.685 ipTM=0.569 tol=1.24 2024-12-05 19:26:20,130 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.1 pTM=0.684 ipTM=0.567 tol=0.729 2024-12-05 19:26:47,509 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.2 pTM=0.683 ipTM=0.591 tol=0.866 2024-12-05 19:27:14,886 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.2 pTM=0.685 ipTM=0.573 tol=0.889 2024-12-05 19:27:42,281 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.4 pTM=0.684 ipTM=0.576 tol=0.719 2024-12-05 19:28:09,681 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=74.6 pTM=0.685 ipTM=0.563 tol=1.48 2024-12-05 19:28:37,068 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74.4 pTM=0.683 ipTM=0.559 tol=2.18 2024-12-05 19:29:04,478 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.4 pTM=0.686 ipTM=0.602 tol=0.825 2024-12-05 19:29:31,902 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74.6 pTM=0.686 ipTM=0.608 tol=0.69 2024-12-05 19:29:59,321 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.6 pTM=0.687 ipTM=0.596 tol=1.03 2024-12-05 19:29:59,322 alphafold2_multimer_v3_model_1_seed_000 took 989.2s (30 recycles) 2024-12-05 19:30:27,528 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=71.9 pTM=0.667 ipTM=0.236 2024-12-05 19:30:55,020 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.2 pTM=0.697 ipTM=0.276 tol=15.2 2024-12-05 19:31:22,477 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.6 pTM=0.691 ipTM=0.271 tol=3.66 2024-12-05 19:31:49,971 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.7 pTM=0.692 ipTM=0.338 tol=4.2 2024-12-05 19:32:17,428 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.9 pTM=0.689 ipTM=0.332 tol=2.93 2024-12-05 19:32:44,896 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74 pTM=0.688 ipTM=0.283 tol=0.969 2024-12-05 19:33:12,354 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.2 pTM=0.689 ipTM=0.261 tol=0.878 2024-12-05 19:33:39,837 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.1 pTM=0.691 ipTM=0.277 tol=2.5 2024-12-05 19:34:07,297 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.8 pTM=0.69 ipTM=0.291 tol=1.44 2024-12-05 19:34:34,771 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.8 pTM=0.692 ipTM=0.273 tol=0.946 2024-12-05 19:35:02,231 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.9 pTM=0.693 ipTM=0.333 tol=2 2024-12-05 19:35:29,705 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.5 pTM=0.697 ipTM=0.515 tol=2.46 2024-12-05 19:35:57,158 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.7 pTM=0.696 ipTM=0.609 tol=3.4 2024-12-05 19:36:24,611 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.4 pTM=0.696 ipTM=0.587 tol=1.07 2024-12-05 19:36:52,062 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.5 pTM=0.698 ipTM=0.565 tol=1.09 2024-12-05 19:37:19,525 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.3 pTM=0.696 ipTM=0.592 tol=1.43 2024-12-05 19:37:46,997 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.6 pTM=0.694 ipTM=0.611 tol=4.01 2024-12-05 19:38:14,438 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.7 pTM=0.693 ipTM=0.596 tol=3.11 2024-12-05 19:38:41,899 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75 pTM=0.695 ipTM=0.628 tol=2.62 2024-12-05 19:39:09,361 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.8 pTM=0.692 ipTM=0.609 tol=1.32 2024-12-05 19:39:36,813 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.8 pTM=0.693 ipTM=0.614 tol=1.67 2024-12-05 19:40:04,262 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.9 pTM=0.697 ipTM=0.606 tol=0.691 2024-12-05 19:40:31,709 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.6 pTM=0.691 ipTM=0.61 tol=1.05 2024-12-05 19:40:59,148 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.9 pTM=0.693 ipTM=0.614 tol=0.738 2024-12-05 19:41:26,591 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.8 pTM=0.694 ipTM=0.608 tol=0.604 2024-12-05 19:41:54,047 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75 pTM=0.694 ipTM=0.603 tol=0.726 2024-12-05 19:42:21,502 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.8 pTM=0.693 ipTM=0.614 tol=0.443 2024-12-05 19:42:21,503 alphafold2_multimer_v3_model_2_seed_000 took 741.4s (26 recycles) 2024-12-05 19:42:49,639 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.4 pTM=0.655 ipTM=0.21 2024-12-05 19:43:17,139 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.6 pTM=0.692 ipTM=0.337 tol=17.8 2024-12-05 19:43:44,622 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.9 pTM=0.696 ipTM=0.442 tol=7.41 2024-12-05 19:44:12,113 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.4 pTM=0.699 ipTM=0.466 tol=4.36 2024-12-05 19:44:39,621 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.5 pTM=0.697 ipTM=0.593 tol=6.91 2024-12-05 19:45:07,132 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74.4 pTM=0.702 ipTM=0.62 tol=7.27 2024-12-05 19:45:34,648 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.6 pTM=0.704 ipTM=0.581 tol=3.07 2024-12-05 19:46:02,142 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.2 pTM=0.702 ipTM=0.604 tol=2.02 2024-12-05 19:46:29,653 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.3 pTM=0.707 ipTM=0.6 tol=1.77 2024-12-05 19:46:57,160 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.6 pTM=0.706 ipTM=0.598 tol=2.35 2024-12-05 19:47:24,688 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.6 pTM=0.706 ipTM=0.585 tol=1.97 2024-12-05 19:47:52,211 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=74.8 pTM=0.708 ipTM=0.599 tol=1.53 2024-12-05 19:48:19,716 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.5 pTM=0.702 ipTM=0.57 tol=3.51 2024-12-05 19:48:47,232 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.4 pTM=0.705 ipTM=0.585 tol=4.23 2024-12-05 19:49:14,743 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.3 pTM=0.701 ipTM=0.595 tol=1.97 2024-12-05 19:49:42,253 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.6 pTM=0.706 ipTM=0.588 tol=2.02 2024-12-05 19:50:09,779 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.4 pTM=0.7 ipTM=0.553 tol=3.54 2024-12-05 19:50:37,319 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.5 pTM=0.705 ipTM=0.601 tol=3.87 2024-12-05 19:51:04,843 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.5 pTM=0.702 ipTM=0.6 tol=4.01 2024-12-05 19:51:32,359 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.2 pTM=0.701 ipTM=0.585 tol=3.8 2024-12-05 19:51:59,925 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.2 pTM=0.703 ipTM=0.396 tol=2.92 2024-12-05 19:52:27,463 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.2 pTM=0.701 ipTM=0.257 tol=2.8 2024-12-05 19:52:54,966 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.9 pTM=0.7 ipTM=0.227 tol=1.94 2024-12-05 19:53:22,463 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.1 pTM=0.702 ipTM=0.237 tol=1.67 2024-12-05 19:53:49,958 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74 pTM=0.703 ipTM=0.251 tol=1.59 2024-12-05 19:54:17,455 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=74.3 pTM=0.704 ipTM=0.259 tol=2.16 2024-12-05 19:54:44,978 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.4 pTM=0.704 ipTM=0.236 tol=2.51 2024-12-05 19:55:12,433 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.9 pTM=0.699 ipTM=0.229 tol=5.23 2024-12-05 19:55:39,925 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.9 pTM=0.699 ipTM=0.246 tol=5.97 2024-12-05 19:56:07,411 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.1 pTM=0.701 ipTM=0.238 tol=3.49 2024-12-05 19:56:34,904 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74 pTM=0.699 ipTM=0.217 tol=4.22 2024-12-05 19:56:34,905 alphafold2_multimer_v3_model_3_seed_000 took 852.7s (30 recycles) 2024-12-05 19:57:03,010 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.8 pTM=0.659 ipTM=0.272 2024-12-05 19:57:30,449 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.8 pTM=0.703 ipTM=0.339 tol=13.5 2024-12-05 19:57:57,888 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72.3 pTM=0.693 ipTM=0.432 tol=3.95 2024-12-05 19:58:25,296 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.9 pTM=0.695 ipTM=0.34 tol=4.13 2024-12-05 19:58:52,738 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.2 pTM=0.701 ipTM=0.293 tol=2.34 2024-12-05 19:59:20,135 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.9 pTM=0.701 ipTM=0.3 tol=4.95 2024-12-05 19:59:47,577 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.9 pTM=0.707 ipTM=0.35 tol=2.13 2024-12-05 20:00:14,994 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.6 pTM=0.7 ipTM=0.35 tol=3.14 2024-12-05 20:00:42,394 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=72.6 pTM=0.694 ipTM=0.315 tol=2.8 2024-12-05 20:01:09,772 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.9 pTM=0.697 ipTM=0.328 tol=3.43 2024-12-05 20:01:37,145 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.9 pTM=0.694 ipTM=0.342 tol=1.55 2024-12-05 20:02:04,528 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.8 pTM=0.701 ipTM=0.598 tol=4.17 2024-12-05 20:02:31,929 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=73.6 pTM=0.693 ipTM=0.625 tol=3.66 2024-12-05 20:02:59,275 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73.5 pTM=0.702 ipTM=0.788 tol=4.24 2024-12-05 20:03:26,672 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73.9 pTM=0.699 ipTM=0.785 tol=2.84 2024-12-05 20:03:54,063 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.1 pTM=0.707 ipTM=0.795 tol=4.11 2024-12-05 20:04:21,425 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=73.7 pTM=0.699 ipTM=0.773 tol=3.5 2024-12-05 20:04:48,792 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.9 pTM=0.702 ipTM=0.79 tol=1.94 2024-12-05 20:05:16,177 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.1 pTM=0.703 ipTM=0.788 tol=1.71 2024-12-05 20:05:43,560 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73.8 pTM=0.706 ipTM=0.787 tol=2.53 2024-12-05 20:06:10,935 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=73.8 pTM=0.702 ipTM=0.771 tol=1.47 2024-12-05 20:06:38,336 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.8 pTM=0.7 ipTM=0.781 tol=1.41 2024-12-05 20:07:05,754 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74.1 pTM=0.705 ipTM=0.781 tol=2.39 2024-12-05 20:07:33,143 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=73.4 pTM=0.695 ipTM=0.773 tol=3.65 2024-12-05 20:08:00,574 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=73.9 pTM=0.707 ipTM=0.781 tol=2.8 2024-12-05 20:08:28,006 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.2 pTM=0.694 ipTM=0.779 tol=2.9 2024-12-05 20:08:55,430 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.1 pTM=0.704 ipTM=0.788 tol=2.3 2024-12-05 20:09:22,859 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.1 pTM=0.697 ipTM=0.777 tol=2.32 2024-12-05 20:09:50,283 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.1 pTM=0.707 ipTM=0.793 tol=1.93 2024-12-05 20:10:17,684 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.1 pTM=0.697 ipTM=0.792 tol=1.56 2024-12-05 20:10:45,080 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74 pTM=0.705 ipTM=0.798 tol=1.54 2024-12-05 20:10:45,081 alphafold2_multimer_v3_model_4_seed_000 took 849.4s (30 recycles) 2024-12-05 20:11:13,219 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=69 pTM=0.659 ipTM=0.173 2024-12-05 20:11:40,676 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.7 pTM=0.679 ipTM=0.333 tol=10.4 2024-12-05 20:12:08,153 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=74.1 pTM=0.697 ipTM=0.323 tol=12.3 2024-12-05 20:12:35,652 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=74.9 pTM=0.706 ipTM=0.291 tol=5.54 2024-12-05 20:13:03,122 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.1 pTM=0.705 ipTM=0.272 tol=4.99 2024-12-05 20:13:30,593 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=74.6 pTM=0.714 ipTM=0.227 tol=8.26 2024-12-05 20:13:58,077 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74.9 pTM=0.711 ipTM=0.193 tol=2.94 2024-12-05 20:14:25,545 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=74.7 pTM=0.707 ipTM=0.213 tol=2.06 2024-12-05 20:14:53,052 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.8 pTM=0.712 ipTM=0.195 tol=1.66 2024-12-05 20:15:20,550 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.9 pTM=0.711 ipTM=0.185 tol=1.99 2024-12-05 20:15:48,054 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75.2 pTM=0.71 ipTM=0.201 tol=2.64 2024-12-05 20:16:15,557 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.9 pTM=0.708 ipTM=0.214 tol=2.5 2024-12-05 20:16:43,061 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.9 pTM=0.708 ipTM=0.186 tol=1.86 2024-12-05 20:17:10,538 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.8 pTM=0.708 ipTM=0.207 tol=2.17 2024-12-05 20:17:38,046 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.9 pTM=0.707 ipTM=0.195 tol=2.57 2024-12-05 20:18:05,539 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=75 pTM=0.709 ipTM=0.195 tol=2.99 2024-12-05 20:18:33,016 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=75.1 pTM=0.711 ipTM=0.193 tol=2.11 2024-12-05 20:19:00,514 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=75.1 pTM=0.71 ipTM=0.24 tol=2.93 2024-12-05 20:19:27,980 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.8 pTM=0.706 ipTM=0.199 tol=1.96 2024-12-05 20:19:55,435 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.8 pTM=0.707 ipTM=0.21 tol=1.89 2024-12-05 20:20:22,912 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.9 pTM=0.71 ipTM=0.204 tol=2.52 2024-12-05 20:20:50,378 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=75.1 pTM=0.708 ipTM=0.205 tol=2.24 2024-12-05 20:21:17,815 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.3 pTM=0.701 ipTM=0.219 tol=2.93 2024-12-05 20:21:45,258 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.8 pTM=0.703 ipTM=0.178 tol=3.4 2024-12-05 20:22:12,719 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.8 pTM=0.706 ipTM=0.209 tol=2.21 2024-12-05 20:22:40,169 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.8 pTM=0.706 ipTM=0.197 tol=2.08 2024-12-05 20:23:07,677 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.9 pTM=0.707 ipTM=0.208 tol=2.01 2024-12-05 20:23:35,155 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.6 pTM=0.702 ipTM=0.207 tol=2.5 2024-12-05 20:24:02,662 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.6 pTM=0.703 ipTM=0.198 tol=3.29 2024-12-05 20:24:30,157 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.6 pTM=0.703 ipTM=0.204 tol=2.87 2024-12-05 20:24:57,678 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.7 pTM=0.705 ipTM=0.207 tol=2.89 2024-12-05 20:24:57,679 alphafold2_multimer_v3_model_5_seed_000 took 851.9s (30 recycles) 2024-12-05 20:24:58,417 reranking models by 'multimer' metric 2024-12-05 20:25:02,052 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-05 20:26:28,582 Relaxation took 90.2s 2024-12-05 20:26:28,582 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74 pTM=0.705 ipTM=0.798 2024-12-05 20:27:25,820 Relaxation took 57.2s 2024-12-05 20:27:25,820 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.8 pTM=0.693 ipTM=0.614 2024-12-05 20:29:28,044 Relaxation took 122.2s 2024-12-05 20:29:28,044 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.6 pTM=0.687 ipTM=0.596 2024-12-05 20:30:34,170 Relaxation took 66.1s 2024-12-05 20:30:34,171 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74 pTM=0.699 ipTM=0.217 2024-12-05 20:32:05,850 Relaxation took 91.7s 2024-12-05 20:32:05,850 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.7 pTM=0.705 ipTM=0.207 2024-12-05 20:32:08,001 Done