2024-12-05 19:55:44,087 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 19:55:44,445 Running on GPU 2024-12-05 19:55:48,171 Found 6 citations for tools or databases 2024-12-05 19:55:48,171 Query 1/1: FBXO11_KIF2C (length 1652) 2024-12-05 19:55:48,472 Sleeping for 7s. Reason: PENDING 2024-12-05 19:55:55,759 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:56:04,023 Sleeping for 7s. Reason: RUNNING 2024-12-05 19:56:11,331 Sleeping for 6s. Reason: RUNNING 2024-12-05 19:56:17,586 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:56:26,850 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:56:37,103 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:56:46,390 Sleeping for 7s. Reason: RUNNING 2024-12-05 19:56:53,647 Sleeping for 6s. Reason: RUNNING 2024-12-05 19:56:59,905 Sleeping for 6s. Reason: RUNNING 2024-12-05 19:57:06,170 Sleeping for 7s. Reason: RUNNING 2024-12-05 19:57:13,468 Sleeping for 5s. Reason: RUNNING 2024-12-05 19:57:18,727 Sleeping for 6s. Reason: RUNNING 2024-12-05 19:57:25,002 Sleeping for 5s. Reason: RUNNING 2024-12-05 19:57:30,260 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:57:39,520 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:57:48,794 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:57:58,054 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:58:06,333 Sleeping for 8s. Reason: RUNNING 2024-12-05 19:58:14,604 Sleeping for 5s. Reason: RUNNING 2024-12-05 19:58:19,871 Sleeping for 5s. Reason: RUNNING 2024-12-05 19:58:25,126 Sleeping for 7s. Reason: RUNNING 2024-12-05 19:58:32,405 Sleeping for 5s. Reason: RUNNING 2024-12-05 19:58:37,685 Sleeping for 7s. Reason: RUNNING 2024-12-05 19:58:44,940 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:58:55,197 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:59:05,462 Sleeping for 9s. Reason: RUNNING 2024-12-05 19:59:14,733 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:59:26,974 Sleeping for 8s. Reason: PENDING 2024-12-05 19:59:35,234 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:59:45,496 Sleeping for 10s. Reason: RUNNING 2024-12-05 19:59:55,764 Sleeping for 10s. Reason: RUNNING 2024-12-05 20:00:06,032 Sleeping for 9s. Reason: RUNNING 2024-12-05 20:00:15,357 Sleeping for 10s. Reason: RUNNING 2024-12-05 20:00:25,649 Sleeping for 9s. Reason: RUNNING 2024-12-05 20:00:34,918 Sleeping for 7s. Reason: RUNNING 2024-12-05 20:00:42,191 Sleeping for 6s. Reason: RUNNING 2024-12-05 20:00:48,475 Sleeping for 8s. Reason: RUNNING 2024-12-05 20:00:56,778 Sleeping for 8s. Reason: RUNNING 2024-12-05 20:01:05,047 Sleeping for 10s. Reason: RUNNING 2024-12-05 20:01:15,321 Sleeping for 7s. Reason: RUNNING 2024-12-05 20:01:22,622 Sleeping for 9s. Reason: RUNNING 2024-12-05 20:01:40,523 Setting max_seq=508, max_extra_seq=2048 2024-12-05 20:05:49,770 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.9 pTM=0.519 ipTM=0.282 2024-12-05 20:07:06,880 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.4 pTM=0.502 ipTM=0.189 tol=12.7 2024-12-05 20:08:24,178 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.5 pTM=0.499 ipTM=0.177 tol=10.6 2024-12-05 20:09:41,454 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.2 pTM=0.504 ipTM=0.186 tol=10.7 2024-12-05 20:10:58,699 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.4 pTM=0.505 ipTM=0.192 tol=8.6 2024-12-05 20:12:15,902 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.6 pTM=0.508 ipTM=0.193 tol=7.08 2024-12-05 20:13:33,108 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.5 pTM=0.508 ipTM=0.197 tol=8.86 2024-12-05 20:14:50,338 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.8 pTM=0.508 ipTM=0.191 tol=6.95 2024-12-05 20:16:07,578 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.6 pTM=0.506 ipTM=0.194 tol=4.59 2024-12-05 20:17:24,814 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.8 pTM=0.508 ipTM=0.192 tol=5.23 2024-12-05 20:18:42,015 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.8 pTM=0.507 ipTM=0.193 tol=8.12 2024-12-05 20:19:59,255 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.9 pTM=0.504 ipTM=0.188 tol=4.43 2024-12-05 20:21:16,482 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.6 pTM=0.507 ipTM=0.195 tol=2.69 2024-12-05 20:22:33,750 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.9 pTM=0.507 ipTM=0.191 tol=5.27 2024-12-05 20:23:50,983 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.8 pTM=0.506 ipTM=0.188 tol=6.84 2024-12-05 20:25:08,236 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.1 pTM=0.508 ipTM=0.191 tol=7.05 2024-12-05 20:26:25,467 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.9 pTM=0.507 ipTM=0.191 tol=3.25 2024-12-05 20:27:42,736 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.1 pTM=0.505 ipTM=0.187 tol=1.99 2024-12-05 20:28:59,992 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=70.1 pTM=0.505 ipTM=0.189 tol=5.41 2024-12-05 20:30:17,254 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.1 pTM=0.505 ipTM=0.187 tol=3.54 2024-12-05 20:31:34,511 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.9 pTM=0.503 ipTM=0.185 tol=3.01 2024-12-05 20:32:51,802 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70 pTM=0.504 ipTM=0.184 tol=2.1 2024-12-05 20:34:09,011 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.9 pTM=0.503 ipTM=0.185 tol=4.82 2024-12-05 20:35:26,234 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.1 pTM=0.504 ipTM=0.187 tol=4.34 2024-12-05 20:36:43,459 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.1 pTM=0.506 ipTM=0.188 tol=2.06 2024-12-05 20:38:00,708 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.1 pTM=0.505 ipTM=0.185 tol=2.1 2024-12-05 20:39:17,982 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.9 pTM=0.507 ipTM=0.189 tol=4.14 2024-12-05 20:40:35,245 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70 pTM=0.507 ipTM=0.189 tol=3.21 2024-12-05 20:41:52,491 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.1 pTM=0.509 ipTM=0.192 tol=1.85 2024-12-05 20:43:09,758 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.9 pTM=0.506 ipTM=0.187 tol=4.06 2024-12-05 20:44:27,035 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.1 pTM=0.5 ipTM=0.183 tol=5.34 2024-12-05 20:44:27,036 alphafold2_multimer_v3_model_1_seed_000 took 2559.5s (30 recycles) 2024-12-05 20:45:46,471 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.9 pTM=0.502 ipTM=0.188 2024-12-05 20:47:03,902 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.6 pTM=0.51 ipTM=0.185 tol=10 2024-12-05 20:48:21,226 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.5 pTM=0.507 ipTM=0.182 tol=8.55 2024-12-05 20:49:38,561 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.2 pTM=0.511 ipTM=0.19 tol=6.2 2024-12-05 20:50:55,930 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.7 pTM=0.512 ipTM=0.186 tol=5.21 2024-12-05 20:52:13,272 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.6 pTM=0.513 ipTM=0.191 tol=3.87 2024-12-05 20:53:30,623 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.1 pTM=0.513 ipTM=0.19 tol=2.69 2024-12-05 20:54:48,007 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71 pTM=0.513 ipTM=0.19 tol=3.56 2024-12-05 20:56:05,348 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.9 pTM=0.513 ipTM=0.19 tol=2.33 2024-12-05 20:57:22,712 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.9 pTM=0.513 ipTM=0.191 tol=1.93 2024-12-05 20:58:40,050 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.1 pTM=0.512 ipTM=0.188 tol=2.73 2024-12-05 20:59:57,384 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.1 pTM=0.513 ipTM=0.189 tol=2.73 2024-12-05 21:01:14,700 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.9 pTM=0.511 ipTM=0.191 tol=3.71 2024-12-05 21:02:32,038 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.1 pTM=0.511 ipTM=0.187 tol=2.45 2024-12-05 21:03:49,426 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.8 pTM=0.51 ipTM=0.187 tol=2.22 2024-12-05 21:05:06,825 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.3 pTM=0.513 ipTM=0.188 tol=2.96 2024-12-05 21:06:24,186 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.1 pTM=0.51 ipTM=0.188 tol=2.91 2024-12-05 21:07:41,550 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.2 pTM=0.512 ipTM=0.188 tol=3.67 2024-12-05 21:08:58,925 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.3 pTM=0.511 ipTM=0.188 tol=4.08 2024-12-05 21:10:16,268 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.2 pTM=0.51 ipTM=0.188 tol=4.15 2024-12-05 21:11:33,653 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.1 pTM=0.511 ipTM=0.188 tol=3.59 2024-12-05 21:12:51,051 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.2 pTM=0.51 ipTM=0.187 tol=3.74 2024-12-05 21:14:08,434 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.2 pTM=0.512 ipTM=0.188 tol=1.95 2024-12-05 21:15:25,828 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.2 pTM=0.513 ipTM=0.19 tol=4.34 2024-12-05 21:16:43,197 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.1 pTM=0.511 ipTM=0.192 tol=3.29 2024-12-05 21:18:00,568 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.5 pTM=0.512 ipTM=0.186 tol=2.92 2024-12-05 21:19:17,908 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.4 pTM=0.512 ipTM=0.19 tol=3.24 2024-12-05 21:20:35,289 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.2 pTM=0.51 ipTM=0.188 tol=2.62 2024-12-05 21:21:52,713 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.2 pTM=0.511 ipTM=0.188 tol=2.61 2024-12-05 21:23:10,124 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.4 pTM=0.512 ipTM=0.191 tol=4.07 2024-12-05 21:24:27,550 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.6 pTM=0.511 ipTM=0.188 tol=3.83 2024-12-05 21:24:27,552 alphafold2_multimer_v3_model_2_seed_000 took 2398.5s (30 recycles) 2024-12-05 21:25:46,875 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.2 pTM=0.511 ipTM=0.245 2024-12-05 21:27:04,027 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70.5 pTM=0.558 ipTM=0.328 tol=14 2024-12-05 21:28:21,351 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.3 pTM=0.512 ipTM=0.208 tol=27.1 2024-12-05 21:29:38,771 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.4 pTM=0.508 ipTM=0.185 tol=10.9 2024-12-05 21:30:56,170 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.1 pTM=0.512 ipTM=0.188 tol=7.01 2024-12-05 21:32:13,503 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.9 pTM=0.512 ipTM=0.186 tol=7.1 2024-12-05 21:33:30,782 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.1 pTM=0.512 ipTM=0.188 tol=4.28 2024-12-05 21:34:48,095 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.2 pTM=0.515 ipTM=0.19 tol=5.04 2024-12-05 21:36:05,401 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.4 pTM=0.514 ipTM=0.188 tol=2.56 2024-12-05 21:37:22,717 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.2 pTM=0.514 ipTM=0.19 tol=4.83 2024-12-05 21:38:40,041 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.4 pTM=0.513 ipTM=0.185 tol=4.36 2024-12-05 21:39:57,354 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.4 pTM=0.516 ipTM=0.191 tol=5.03 2024-12-05 21:41:14,669 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.3 pTM=0.512 ipTM=0.186 tol=3.21 2024-12-05 21:42:32,020 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.3 pTM=0.514 ipTM=0.19 tol=4.66 2024-12-05 21:43:49,332 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.4 pTM=0.514 ipTM=0.186 tol=3.36 2024-12-05 21:45:06,661 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.6 pTM=0.516 ipTM=0.191 tol=5.57 2024-12-05 21:46:23,974 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.4 pTM=0.512 ipTM=0.184 tol=4.19 2024-12-05 21:47:41,282 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.6 pTM=0.515 ipTM=0.188 tol=4.61 2024-12-05 21:48:58,600 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.4 pTM=0.514 ipTM=0.185 tol=3.81 2024-12-05 21:50:15,894 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.4 pTM=0.516 ipTM=0.191 tol=4.84 2024-12-05 21:51:33,253 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.5 pTM=0.515 ipTM=0.186 tol=3.78 2024-12-05 21:52:50,574 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.5 pTM=0.515 ipTM=0.187 tol=5.6 2024-12-05 21:54:07,885 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.4 pTM=0.513 ipTM=0.185 tol=4.79 2024-12-05 21:55:25,196 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.6 pTM=0.517 ipTM=0.189 tol=4.11 2024-12-05 21:56:42,533 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.5 pTM=0.517 ipTM=0.187 tol=3.89 2024-12-05 21:57:59,858 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.5 pTM=0.515 ipTM=0.182 tol=4.42 2024-12-05 21:59:17,194 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.4 pTM=0.516 ipTM=0.187 tol=3.93 2024-12-05 22:00:34,542 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.5 pTM=0.515 ipTM=0.185 tol=4.53 2024-12-05 22:01:51,902 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.4 pTM=0.514 ipTM=0.187 tol=4.68 2024-12-05 22:03:09,259 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.5 pTM=0.513 ipTM=0.184 tol=5.96 2024-12-05 22:04:26,640 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.3 pTM=0.514 ipTM=0.186 tol=7.25 2024-12-05 22:04:26,641 alphafold2_multimer_v3_model_3_seed_000 took 2397.0s (30 recycles) 2024-12-05 22:05:46,195 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.2 pTM=0.497 ipTM=0.176 2024-12-05 22:07:03,652 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.8 pTM=0.508 ipTM=0.269 tol=12.2 2024-12-05 22:08:21,108 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.2 pTM=0.515 ipTM=0.275 tol=6.53 2024-12-05 22:09:38,464 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.7 pTM=0.523 ipTM=0.304 tol=12 2024-12-05 22:10:55,854 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.4 pTM=0.52 ipTM=0.313 tol=7.09 2024-12-05 22:12:13,182 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.8 pTM=0.521 ipTM=0.284 tol=3.99 2024-12-05 22:13:30,524 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.2 pTM=0.517 ipTM=0.269 tol=3.85 2024-12-05 22:14:47,956 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70 pTM=0.518 ipTM=0.255 tol=5.52 2024-12-05 22:16:05,458 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.2 pTM=0.518 ipTM=0.242 tol=8.57 2024-12-05 22:17:22,884 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.8 pTM=0.519 ipTM=0.235 tol=7.04 2024-12-05 22:18:40,309 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.9 pTM=0.516 ipTM=0.216 tol=5.87 2024-12-05 22:19:57,748 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.7 pTM=0.518 ipTM=0.226 tol=4.98 2024-12-05 22:21:15,192 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.9 pTM=0.516 ipTM=0.214 tol=4.84 2024-12-05 22:22:32,628 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.7 pTM=0.517 ipTM=0.216 tol=5.45 2024-12-05 22:23:50,081 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.1 pTM=0.516 ipTM=0.214 tol=5.29 2024-12-05 22:25:07,549 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.2 pTM=0.521 ipTM=0.222 tol=5.69 2024-12-05 22:26:24,976 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70 pTM=0.514 ipTM=0.214 tol=6.36 2024-12-05 22:27:42,474 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.1 pTM=0.519 ipTM=0.227 tol=7.49 2024-12-05 22:28:59,953 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.2 pTM=0.515 ipTM=0.225 tol=7.37 2024-12-05 22:30:17,405 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70 pTM=0.517 ipTM=0.228 tol=7.1 2024-12-05 22:31:34,847 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70 pTM=0.518 ipTM=0.224 tol=4.03 2024-12-05 22:32:52,315 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.9 pTM=0.517 ipTM=0.224 tol=5.1 2024-12-05 22:34:09,773 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.2 pTM=0.518 ipTM=0.219 tol=5.64 2024-12-05 22:35:27,341 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70 pTM=0.518 ipTM=0.228 tol=6.18 2024-12-05 22:36:44,871 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.2 pTM=0.518 ipTM=0.214 tol=5.99 2024-12-05 22:38:02,320 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70 pTM=0.519 ipTM=0.218 tol=7.24 2024-12-05 22:39:19,797 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.4 pTM=0.518 ipTM=0.227 tol=6.79 2024-12-05 22:40:37,253 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70 pTM=0.517 ipTM=0.225 tol=5.08 2024-12-05 22:41:54,712 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.3 pTM=0.517 ipTM=0.22 tol=5.82 2024-12-05 22:43:12,124 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70 pTM=0.517 ipTM=0.224 tol=5.98 2024-12-05 22:44:29,553 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.1 pTM=0.515 ipTM=0.215 tol=5.3 2024-12-05 22:44:29,555 alphafold2_multimer_v3_model_4_seed_000 took 2400.9s (30 recycles) 2024-12-05 22:45:48,937 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.2 pTM=0.492 ipTM=0.179 2024-12-05 22:47:06,239 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.1 pTM=0.513 ipTM=0.292 tol=15.9 2024-12-05 22:48:23,612 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.2 pTM=0.512 ipTM=0.2 tol=17.4 2024-12-05 22:49:41,026 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.9 pTM=0.512 ipTM=0.232 tol=10.3 2024-12-05 22:50:58,476 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.4 pTM=0.512 ipTM=0.209 tol=6.75 2024-12-05 22:52:15,918 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.3 pTM=0.513 ipTM=0.236 tol=6.11 2024-12-05 22:53:33,291 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.4 pTM=0.513 ipTM=0.221 tol=4.76 2024-12-05 22:54:50,674 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.6 pTM=0.513 ipTM=0.236 tol=4.4 2024-12-05 22:56:08,168 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.4 pTM=0.512 ipTM=0.218 tol=3.23 2024-12-05 22:57:25,692 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.4 pTM=0.516 ipTM=0.23 tol=3.14 2024-12-05 22:58:43,160 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.6 pTM=0.514 ipTM=0.212 tol=2.91 2024-12-05 23:00:00,730 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.4 pTM=0.515 ipTM=0.223 tol=4 2024-12-05 23:01:18,178 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.4 pTM=0.515 ipTM=0.213 tol=3.48 2024-12-05 23:02:35,617 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.4 pTM=0.515 ipTM=0.232 tol=3.96 2024-12-05 23:03:53,011 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.4 pTM=0.515 ipTM=0.221 tol=4.21 2024-12-05 23:05:10,427 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.7 pTM=0.517 ipTM=0.237 tol=4.05 2024-12-05 23:06:27,779 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.6 pTM=0.514 ipTM=0.217 tol=5.31 2024-12-05 23:07:45,321 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.6 pTM=0.517 ipTM=0.237 tol=2.71 2024-12-05 23:09:02,802 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.5 pTM=0.515 ipTM=0.223 tol=4.86 2024-12-05 23:10:20,258 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.6 pTM=0.518 ipTM=0.236 tol=3.37 2024-12-05 23:11:37,683 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.4 pTM=0.518 ipTM=0.222 tol=5.9 2024-12-05 23:12:55,066 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.4 pTM=0.515 ipTM=0.229 tol=4.34 2024-12-05 23:14:12,445 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.4 pTM=0.514 ipTM=0.213 tol=5.54 2024-12-05 23:15:29,948 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.5 pTM=0.516 ipTM=0.228 tol=3.56 2024-12-05 23:16:47,387 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.4 pTM=0.517 ipTM=0.217 tol=5.37 2024-12-05 23:18:04,785 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.5 pTM=0.516 ipTM=0.224 tol=4.7 2024-12-05 23:19:22,181 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.4 pTM=0.517 ipTM=0.219 tol=5.29 2024-12-05 23:20:39,578 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.6 pTM=0.515 ipTM=0.232 tol=5.41 2024-12-05 23:21:56,957 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.4 pTM=0.514 ipTM=0.225 tol=4.7 2024-12-05 23:23:14,434 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.4 pTM=0.515 ipTM=0.241 tol=4.59 2024-12-05 23:24:31,825 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.5 pTM=0.516 ipTM=0.252 tol=4.45 2024-12-05 23:24:31,827 alphafold2_multimer_v3_model_5_seed_000 took 2400.2s (30 recycles) 2024-12-05 23:24:33,865 reranking models by 'multimer' metric 2024-12-05 23:24:38,700 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-05 23:28:35,422 Relaxation took 241.6s 2024-12-05 23:28:35,423 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.5 pTM=0.516 ipTM=0.252 2024-12-05 23:33:03,546 Relaxation took 268.1s 2024-12-05 23:33:03,547 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.1 pTM=0.515 ipTM=0.215 2024-12-05 23:37:48,450 Relaxation took 284.9s 2024-12-05 23:37:48,450 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.6 pTM=0.511 ipTM=0.188 2024-12-05 23:43:02,370 Relaxation took 313.9s 2024-12-05 23:43:02,370 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.3 pTM=0.514 ipTM=0.186 2024-12-05 23:48:22,102 Relaxation took 319.7s 2024-12-05 23:48:22,102 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.1 pTM=0.5 ipTM=0.183 2024-12-05 23:48:26,544 Done