2024-12-05 20:20:51,943 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 20:20:52,245 Running on GPU 2024-12-05 20:20:56,153 Found 6 citations for tools or databases 2024-12-05 20:20:56,153 Query 1/1: FBXO17_NMT1 (length 774) 2024-12-05 20:20:56,441 Sleeping for 10s. Reason: PENDING 2024-12-05 20:21:06,705 Sleeping for 10s. Reason: RUNNING 2024-12-05 20:21:16,968 Sleeping for 6s. Reason: RUNNING 2024-12-05 20:21:23,230 Sleeping for 7s. Reason: RUNNING 2024-12-05 20:21:30,491 Sleeping for 10s. Reason: RUNNING 2024-12-05 20:21:40,757 Sleeping for 9s. Reason: RUNNING 2024-12-05 20:21:50,016 Sleeping for 7s. Reason: RUNNING 2024-12-05 20:21:57,287 Sleeping for 8s. Reason: RUNNING 2024-12-05 20:22:05,544 Sleeping for 5s. Reason: RUNNING 2024-12-05 20:22:10,802 Sleeping for 9s. Reason: RUNNING 2024-12-05 20:22:20,063 Sleeping for 6s. Reason: RUNNING 2024-12-05 20:22:27,832 Sleeping for 7s. Reason: PENDING 2024-12-05 20:22:35,084 Sleeping for 9s. Reason: RUNNING 2024-12-05 20:22:44,344 Sleeping for 7s. Reason: RUNNING 2024-12-05 20:22:51,624 Sleeping for 10s. Reason: RUNNING 2024-12-05 20:23:01,885 Sleeping for 5s. Reason: RUNNING 2024-12-05 20:23:07,145 Sleeping for 6s. Reason: RUNNING 2024-12-05 20:23:13,402 Sleeping for 10s. Reason: RUNNING 2024-12-05 20:23:23,660 Sleeping for 6s. Reason: RUNNING 2024-12-05 20:23:29,924 Sleeping for 6s. Reason: RUNNING 2024-12-05 20:23:38,053 Setting max_seq=508, max_extra_seq=2048 2024-12-05 20:26:15,224 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=75.8 pTM=0.543 ipTM=0.146 2024-12-05 20:26:27,302 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=79.1 pTM=0.609 ipTM=0.37 tol=16.6 2024-12-05 20:26:39,418 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=78.8 pTM=0.573 ipTM=0.243 tol=6.47 2024-12-05 20:26:51,537 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=79 pTM=0.581 ipTM=0.292 tol=4 2024-12-05 20:27:03,669 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78.7 pTM=0.566 ipTM=0.227 tol=3.68 2024-12-05 20:27:15,794 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77.7 pTM=0.543 ipTM=0.177 tol=4.81 2024-12-05 20:27:27,937 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78.8 pTM=0.581 ipTM=0.277 tol=3.83 2024-12-05 20:27:40,086 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=78.9 pTM=0.587 ipTM=0.294 tol=3.22 2024-12-05 20:27:52,245 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=79.2 pTM=0.612 ipTM=0.364 tol=2.31 2024-12-05 20:28:04,434 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=79 pTM=0.582 ipTM=0.271 tol=1.6 2024-12-05 20:28:16,567 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=78 pTM=0.554 ipTM=0.211 tol=1.71 2024-12-05 20:28:28,728 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=78.8 pTM=0.579 ipTM=0.275 tol=1.62 2024-12-05 20:28:40,913 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=79.7 pTM=0.625 ipTM=0.389 tol=1.98 2024-12-05 20:28:53,078 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=79 pTM=0.584 ipTM=0.283 tol=1.62 2024-12-05 20:29:05,273 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78.8 pTM=0.568 ipTM=0.25 tol=1.67 2024-12-05 20:29:17,484 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=79 pTM=0.577 ipTM=0.256 tol=5.59 2024-12-05 20:29:29,654 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=78.9 pTM=0.58 ipTM=0.283 tol=4.96 2024-12-05 20:29:41,865 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=78.8 pTM=0.569 ipTM=0.232 tol=1.21 2024-12-05 20:29:54,080 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.4 pTM=0.556 ipTM=0.203 tol=1.99 2024-12-05 20:30:06,282 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=78.9 pTM=0.576 ipTM=0.254 tol=1.75 2024-12-05 20:30:18,464 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=79.2 pTM=0.601 ipTM=0.337 tol=1.17 2024-12-05 20:30:30,688 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=79.1 pTM=0.576 ipTM=0.248 tol=1.98 2024-12-05 20:30:42,876 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=78.2 pTM=0.547 ipTM=0.178 tol=2.71 2024-12-05 20:30:55,071 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=79.1 pTM=0.592 ipTM=0.303 tol=3.62 2024-12-05 20:31:07,264 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=79.1 pTM=0.583 ipTM=0.274 tol=1.41 2024-12-05 20:31:19,451 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=78.6 pTM=0.57 ipTM=0.263 tol=1.18 2024-12-05 20:31:31,653 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=78.7 pTM=0.564 ipTM=0.221 tol=1.38 2024-12-05 20:31:43,829 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=78 pTM=0.547 ipTM=0.19 tol=1.8 2024-12-05 20:31:56,050 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=78.9 pTM=0.576 ipTM=0.253 tol=2.07 2024-12-05 20:32:08,241 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=80 pTM=0.646 ipTM=0.446 tol=1.87 2024-12-05 20:32:20,444 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=79.4 pTM=0.6 ipTM=0.314 tol=1.54 2024-12-05 20:32:20,445 alphafold2_multimer_v3_model_1_seed_000 took 517.1s (30 recycles) 2024-12-05 20:32:33,084 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.1 pTM=0.545 ipTM=0.147 2024-12-05 20:32:45,353 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.9 pTM=0.536 ipTM=0.137 tol=8.61 2024-12-05 20:32:57,584 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.8 pTM=0.587 ipTM=0.302 tol=10.4 2024-12-05 20:33:09,825 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78.8 pTM=0.563 ipTM=0.218 tol=3.96 2024-12-05 20:33:22,033 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.1 pTM=0.544 ipTM=0.168 tol=2.62 2024-12-05 20:33:34,268 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.4 pTM=0.558 ipTM=0.205 tol=2.24 2024-12-05 20:33:46,515 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.8 pTM=0.559 ipTM=0.2 tol=2.48 2024-12-05 20:33:58,732 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=78.7 pTM=0.558 ipTM=0.197 tol=1.08 2024-12-05 20:34:10,974 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=79.1 pTM=0.567 ipTM=0.225 tol=2.41 2024-12-05 20:34:23,230 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.1 pTM=0.573 ipTM=0.246 tol=1.85 2024-12-05 20:34:35,459 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79.2 pTM=0.583 ipTM=0.291 tol=1.29 2024-12-05 20:34:47,685 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=79.1 pTM=0.569 ipTM=0.236 tol=1.89 2024-12-05 20:34:59,909 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78.9 pTM=0.555 ipTM=0.191 tol=2.13 2024-12-05 20:35:12,135 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.8 pTM=0.564 ipTM=0.22 tol=3.25 2024-12-05 20:35:24,370 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=79 pTM=0.573 ipTM=0.253 tol=2.09 2024-12-05 20:35:36,590 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.8 pTM=0.563 ipTM=0.215 tol=1.63 2024-12-05 20:35:48,819 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.5 pTM=0.552 ipTM=0.189 tol=2.43 2024-12-05 20:36:01,054 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.8 pTM=0.567 ipTM=0.233 tol=1.63 2024-12-05 20:36:13,271 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=79.3 pTM=0.589 ipTM=0.303 tol=1.82 2024-12-05 20:36:25,489 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=79.2 pTM=0.57 ipTM=0.234 tol=1.91 2024-12-05 20:36:37,721 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78.4 pTM=0.549 ipTM=0.18 tol=2.56 2024-12-05 20:36:49,946 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.9 pTM=0.567 ipTM=0.229 tol=1.93 2024-12-05 20:37:02,163 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.8 pTM=0.559 ipTM=0.2 tol=1 2024-12-05 20:37:14,405 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.6 pTM=0.551 ipTM=0.186 tol=1.31 2024-12-05 20:37:26,631 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=78.9 pTM=0.571 ipTM=0.244 tol=2.51 2024-12-05 20:37:38,861 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.8 pTM=0.562 ipTM=0.208 tol=1.85 2024-12-05 20:37:51,095 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.8 pTM=0.557 ipTM=0.198 tol=1.53 2024-12-05 20:38:03,323 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.8 pTM=0.559 ipTM=0.203 tol=1.25 2024-12-05 20:38:15,527 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=78.6 pTM=0.56 ipTM=0.214 tol=2.31 2024-12-05 20:38:27,742 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=78.9 pTM=0.568 ipTM=0.226 tol=2.13 2024-12-05 20:38:39,969 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=79.2 pTM=0.583 ipTM=0.274 tol=2.14 2024-12-05 20:38:39,970 alphafold2_multimer_v3_model_2_seed_000 took 379.1s (30 recycles) 2024-12-05 20:38:52,725 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.8 pTM=0.536 ipTM=0.128 2024-12-05 20:39:05,109 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=77.7 pTM=0.538 ipTM=0.138 tol=17.5 2024-12-05 20:39:17,406 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=77.6 pTM=0.541 ipTM=0.149 tol=4.76 2024-12-05 20:39:29,724 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.6 pTM=0.539 ipTM=0.15 tol=3.11 2024-12-05 20:39:42,035 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=77.7 pTM=0.54 ipTM=0.152 tol=2.61 2024-12-05 20:39:54,387 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.8 pTM=0.543 ipTM=0.161 tol=2.21 2024-12-05 20:40:06,714 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.1 pTM=0.539 ipTM=0.157 tol=1.8 2024-12-05 20:40:19,049 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=78 pTM=0.542 ipTM=0.157 tol=2.06 2024-12-05 20:40:31,381 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=78.2 pTM=0.542 ipTM=0.153 tol=1.72 2024-12-05 20:40:43,735 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.2 pTM=0.542 ipTM=0.154 tol=2.04 2024-12-05 20:40:56,067 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=78.1 pTM=0.541 ipTM=0.158 tol=1.75 2024-12-05 20:41:08,376 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.8 pTM=0.539 ipTM=0.152 tol=1.81 2024-12-05 20:41:20,688 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.1 pTM=0.541 ipTM=0.153 tol=1.85 2024-12-05 20:41:33,025 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.9 pTM=0.536 ipTM=0.153 tol=3.62 2024-12-05 20:41:45,345 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.9 pTM=0.538 ipTM=0.153 tol=1.93 2024-12-05 20:41:57,695 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.6 pTM=0.53 ipTM=0.152 tol=6.75 2024-12-05 20:42:10,015 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=78.1 pTM=0.538 ipTM=0.151 tol=5.52 2024-12-05 20:42:22,335 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77.7 pTM=0.537 ipTM=0.149 tol=1.93 2024-12-05 20:42:34,675 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=78.1 pTM=0.54 ipTM=0.155 tol=1.71 2024-12-05 20:42:46,988 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.8 pTM=0.535 ipTM=0.149 tol=1.73 2024-12-05 20:42:59,271 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.7 pTM=0.538 ipTM=0.154 tol=2.24 2024-12-05 20:43:11,600 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.9 pTM=0.54 ipTM=0.154 tol=1.19 2024-12-05 20:43:23,913 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.8 pTM=0.541 ipTM=0.154 tol=1.15 2024-12-05 20:43:36,241 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.9 pTM=0.539 ipTM=0.154 tol=1.65 2024-12-05 20:43:48,570 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.8 pTM=0.539 ipTM=0.156 tol=1.44 2024-12-05 20:44:00,893 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.8 pTM=0.535 ipTM=0.151 tol=1.84 2024-12-05 20:44:13,225 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=78.1 pTM=0.54 ipTM=0.155 tol=1.56 2024-12-05 20:44:25,546 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.8 pTM=0.533 ipTM=0.146 tol=3.85 2024-12-05 20:44:37,863 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.9 pTM=0.541 ipTM=0.155 tol=3.34 2024-12-05 20:44:50,178 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.6 pTM=0.539 ipTM=0.154 tol=1.43 2024-12-05 20:45:02,503 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.9 pTM=0.539 ipTM=0.151 tol=1.39 2024-12-05 20:45:02,503 alphafold2_multimer_v3_model_3_seed_000 took 382.2s (30 recycles) 2024-12-05 20:45:15,171 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.4 pTM=0.54 ipTM=0.157 2024-12-05 20:45:27,442 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=76.3 pTM=0.539 ipTM=0.15 tol=14.4 2024-12-05 20:45:39,691 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76.2 pTM=0.534 ipTM=0.151 tol=10.2 2024-12-05 20:45:51,980 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=77.2 pTM=0.533 ipTM=0.134 tol=6.36 2024-12-05 20:46:04,238 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.6 pTM=0.531 ipTM=0.137 tol=4.52 2024-12-05 20:46:16,522 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=76.9 pTM=0.532 ipTM=0.139 tol=2.44 2024-12-05 20:46:28,795 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=76.9 pTM=0.533 ipTM=0.143 tol=2.23 2024-12-05 20:46:41,066 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=76.9 pTM=0.533 ipTM=0.145 tol=3.39 2024-12-05 20:46:53,320 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77.2 pTM=0.528 ipTM=0.143 tol=5.29 2024-12-05 20:47:05,599 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.2 pTM=0.533 ipTM=0.143 tol=5.58 2024-12-05 20:47:17,871 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.2 pTM=0.527 ipTM=0.146 tol=3.5 2024-12-05 20:47:30,142 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.1 pTM=0.531 ipTM=0.146 tol=5.9 2024-12-05 20:47:42,402 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.1 pTM=0.525 ipTM=0.144 tol=6.63 2024-12-05 20:47:54,685 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.4 pTM=0.531 ipTM=0.145 tol=7.73 2024-12-05 20:48:06,970 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77.4 pTM=0.534 ipTM=0.145 tol=3.29 2024-12-05 20:48:19,264 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=77.2 pTM=0.529 ipTM=0.146 tol=4.69 2024-12-05 20:48:31,540 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.2 pTM=0.532 ipTM=0.145 tol=1.73 2024-12-05 20:48:43,793 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.3 pTM=0.527 ipTM=0.143 tol=2.69 2024-12-05 20:48:56,082 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.3 pTM=0.536 ipTM=0.142 tol=3.47 2024-12-05 20:49:08,367 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.5 pTM=0.53 ipTM=0.138 tol=1.57 2024-12-05 20:49:20,634 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.1 pTM=0.535 ipTM=0.144 tol=3.47 2024-12-05 20:49:32,914 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.3 pTM=0.53 ipTM=0.142 tol=2.31 2024-12-05 20:49:45,182 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77 pTM=0.534 ipTM=0.144 tol=1.32 2024-12-05 20:49:57,462 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77 pTM=0.53 ipTM=0.145 tol=1.53 2024-12-05 20:50:09,736 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77 pTM=0.534 ipTM=0.146 tol=1.37 2024-12-05 20:50:21,999 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.2 pTM=0.529 ipTM=0.145 tol=1.23 2024-12-05 20:50:34,281 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.1 pTM=0.534 ipTM=0.143 tol=1.7 2024-12-05 20:50:46,546 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77.2 pTM=0.531 ipTM=0.135 tol=2.05 2024-12-05 20:50:58,780 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=76.6 pTM=0.532 ipTM=0.141 tol=2.43 2024-12-05 20:51:11,022 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.1 pTM=0.53 ipTM=0.137 tol=3.1 2024-12-05 20:51:23,302 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77 pTM=0.534 ipTM=0.139 tol=2.86 2024-12-05 20:51:23,303 alphafold2_multimer_v3_model_4_seed_000 took 380.4s (30 recycles) 2024-12-05 20:51:35,964 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.6 pTM=0.555 ipTM=0.525 2024-12-05 20:51:48,276 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.4 pTM=0.561 ipTM=0.631 tol=7.87 2024-12-05 20:52:00,573 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=79.2 pTM=0.558 ipTM=0.619 tol=6.11 2024-12-05 20:52:12,881 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79.3 pTM=0.557 ipTM=0.621 tol=5.06 2024-12-05 20:52:25,196 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=79.4 pTM=0.555 ipTM=0.619 tol=6.14 2024-12-05 20:52:37,498 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79.4 pTM=0.557 ipTM=0.601 tol=10.5 2024-12-05 20:52:49,822 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.6 pTM=0.557 ipTM=0.606 tol=10.6 2024-12-05 20:53:02,128 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.4 pTM=0.555 ipTM=0.589 tol=6.11 2024-12-05 20:53:14,453 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=79.4 pTM=0.555 ipTM=0.588 tol=6.57 2024-12-05 20:53:26,761 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=79.6 pTM=0.556 ipTM=0.589 tol=6.21 2024-12-05 20:53:39,074 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=79.5 pTM=0.555 ipTM=0.577 tol=8.45 2024-12-05 20:53:51,386 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=79.4 pTM=0.554 ipTM=0.576 tol=7.67 2024-12-05 20:54:03,711 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=79.7 pTM=0.553 ipTM=0.57 tol=4.49 2024-12-05 20:54:16,014 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=79.3 pTM=0.554 ipTM=0.555 tol=6.85 2024-12-05 20:54:28,302 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=79.2 pTM=0.552 ipTM=0.565 tol=6.14 2024-12-05 20:54:40,608 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=79.3 pTM=0.553 ipTM=0.558 tol=10.6 2024-12-05 20:54:52,895 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=79.3 pTM=0.553 ipTM=0.564 tol=6.66 2024-12-05 20:55:05,198 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=79.2 pTM=0.554 ipTM=0.561 tol=4.74 2024-12-05 20:55:17,499 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=79.4 pTM=0.554 ipTM=0.572 tol=3.48 2024-12-05 20:55:29,783 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=79.2 pTM=0.554 ipTM=0.571 tol=5.28 2024-12-05 20:55:42,089 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=79.2 pTM=0.553 ipTM=0.568 tol=8.91 2024-12-05 20:55:54,384 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=79.4 pTM=0.554 ipTM=0.572 tol=6.79 2024-12-05 20:56:06,680 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=79.2 pTM=0.554 ipTM=0.571 tol=4.02 2024-12-05 20:56:18,979 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=79.2 pTM=0.553 ipTM=0.574 tol=3.69 2024-12-05 20:56:31,282 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=79.2 pTM=0.554 ipTM=0.57 tol=4.92 2024-12-05 20:56:43,589 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=79.1 pTM=0.554 ipTM=0.557 tol=3.69 2024-12-05 20:56:55,889 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=79.2 pTM=0.554 ipTM=0.565 tol=6.61 2024-12-05 20:57:08,172 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=79.5 pTM=0.554 ipTM=0.579 tol=3.11 2024-12-05 20:57:20,466 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=79.4 pTM=0.556 ipTM=0.582 tol=3.61 2024-12-05 20:57:32,761 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=79.6 pTM=0.557 ipTM=0.587 tol=3.46 2024-12-05 20:57:45,058 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=79.7 pTM=0.557 ipTM=0.585 tol=4.1 2024-12-05 20:57:45,059 alphafold2_multimer_v3_model_5_seed_000 took 381.4s (30 recycles) 2024-12-05 20:57:45,438 reranking models by 'multimer' metric 2024-12-05 20:57:48,743 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-05 20:58:44,545 Relaxation took 59.1s 2024-12-05 20:58:44,545 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=79.7 pTM=0.557 ipTM=0.585 2024-12-05 20:59:31,648 Relaxation took 47.1s 2024-12-05 20:59:31,649 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=79.4 pTM=0.6 ipTM=0.314 2024-12-05 21:00:16,771 Relaxation took 45.1s 2024-12-05 21:00:16,771 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=79.2 pTM=0.583 ipTM=0.274 2024-12-05 21:01:15,773 Relaxation took 59.0s 2024-12-05 21:01:15,773 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.9 pTM=0.539 ipTM=0.151 2024-12-05 21:02:19,770 Relaxation took 64.0s 2024-12-05 21:02:19,770 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77 pTM=0.534 ipTM=0.139 2024-12-05 21:02:21,156 Done