2024-12-05 22:23:56,480 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 22:23:56,791 Running on GPU
2024-12-05 22:24:00,857 Found 6 citations for tools or databases
2024-12-05 22:24:00,858 Query 1/1: FBXO2_AGRN (length 2364)
2024-12-05 22:24:01,166 Sleeping for 10s. Reason: PENDING
2024-12-05 22:24:11,429 Sleeping for 7s. Reason: PENDING
2024-12-05 22:24:18,684 Sleeping for 7s. Reason: PENDING
2024-12-05 22:24:25,937 Sleeping for 7s. Reason: PENDING
2024-12-05 22:24:33,196 Sleeping for 7s. Reason: PENDING
2024-12-05 22:24:40,453 Sleeping for 6s. Reason: PENDING
2024-12-05 22:24:46,718 Sleeping for 8s. Reason: PENDING
2024-12-05 22:24:54,974 Sleeping for 7s. Reason: PENDING
2024-12-05 22:25:02,237 Sleeping for 7s. Reason: PENDING
2024-12-05 22:25:09,492 Sleeping for 8s. Reason: PENDING
2024-12-05 22:25:17,753 Sleeping for 6s. Reason: PENDING
2024-12-05 22:25:24,002 Sleeping for 5s. Reason: PENDING
2024-12-05 22:25:29,255 Sleeping for 9s. Reason: PENDING
2024-12-05 22:25:38,511 Sleeping for 5s. Reason: PENDING
2024-12-05 22:25:43,767 Sleeping for 5s. Reason: PENDING
2024-12-05 22:25:49,021 Sleeping for 5s. Reason: PENDING
2024-12-05 22:25:54,285 Sleeping for 10s. Reason: PENDING
2024-12-05 22:26:04,541 Sleeping for 9s. Reason: PENDING
2024-12-05 22:26:13,798 Sleeping for 7s. Reason: PENDING
2024-12-05 22:26:21,062 Sleeping for 8s. Reason: PENDING
2024-12-05 22:26:29,340 Sleeping for 9s. Reason: PENDING
2024-12-05 22:26:38,600 Sleeping for 9s. Reason: PENDING
2024-12-05 22:26:47,862 Sleeping for 7s. Reason: PENDING
2024-12-05 22:26:55,123 Sleeping for 9s. Reason: PENDING
2024-12-05 22:27:04,387 Sleeping for 8s. Reason: PENDING
2024-12-05 22:27:12,640 Sleeping for 7s. Reason: PENDING
2024-12-05 22:27:19,896 Sleeping for 9s. Reason: PENDING
2024-12-05 22:27:29,157 Sleeping for 9s. Reason: PENDING
2024-12-05 22:27:38,416 Sleeping for 8s. Reason: PENDING
2024-12-05 22:27:46,675 Sleeping for 9s. Reason: PENDING
2024-12-05 22:27:55,936 Sleeping for 5s. Reason: PENDING
2024-12-05 22:28:01,199 Sleeping for 8s. Reason: PENDING
2024-12-05 22:28:09,457 Sleeping for 9s. Reason: PENDING
2024-12-05 22:28:18,720 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:28:27,988 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:28:37,245 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:28:44,507 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:28:53,766 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:29:04,028 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:29:12,287 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:29:22,545 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:29:30,800 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:29:37,053 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:29:44,306 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:29:49,565 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:29:56,822 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:30:05,076 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:30:11,340 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:30:21,602 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:30:26,859 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:30:37,118 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:30:44,387 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:30:50,645 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:30:58,904 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:31:08,166 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:31:15,427 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:31:24,693 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:31:30,948 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:31:40,205 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:31:46,465 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:31:54,722 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:32:01,982 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:32:11,248 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:32:20,505 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:32:30,765 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:32:36,022 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:32:41,278 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:32:46,530 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:32:56,799 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:33:07,070 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:33:12,325 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:33:22,583 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:33:28,845 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:33:37,101 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:33:43,363 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:33:52,627 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:34:02,891 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:34:11,151 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:34:17,404 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:34:29,685 Sleeping for 8s. Reason: PENDING
2024-12-05 22:34:37,931 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:34:43,182 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:34:51,446 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:34:58,701 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:35:03,965 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:35:14,223 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:35:21,482 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:35:28,737 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:35:34,995 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:35:43,256 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:35:50,512 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:35:56,765 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:36:06,029 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:36:11,280 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:36:20,547 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:36:30,803 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:36:41,059 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:36:47,313 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:36:57,574 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:37:04,832 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:37:12,088 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:37:20,353 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:37:30,613 Sleeping for 10s. Reason: RUNNING
2024-12-05 22:37:40,878 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:37:49,138 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:37:58,395 Sleeping for 9s. Reason: RUNNING
2024-12-05 22:38:07,651 Sleeping for 7s. Reason: RUNNING
2024-12-05 22:38:14,910 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:38:21,166 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:38:29,418 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:38:34,677 Sleeping for 6s. Reason: RUNNING
2024-12-05 22:38:40,933 Sleeping for 5s. Reason: RUNNING
2024-12-05 22:38:46,186 Sleeping for 8s. Reason: RUNNING
2024-12-05 22:39:04,173 Setting max_seq=508, max_extra_seq=2048
2024-12-05 22:45:39,766 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.4 pTM=0.325 ipTM=0.509
2024-12-05 22:49:47,169 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.3 pTM=0.314 ipTM=0.451 tol=13.9
2024-12-05 22:53:54,517 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.7 pTM=0.32 ipTM=0.546 tol=9.51
2024-12-05 22:58:01,826 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.6 pTM=0.335 ipTM=0.388 tol=13.7
2024-12-05 23:02:09,207 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.9 pTM=0.348 ipTM=0.367 tol=10.4
2024-12-05 23:06:16,586 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.7 pTM=0.365 ipTM=0.521 tol=9.68
2024-12-05 23:10:23,998 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.2 pTM=0.375 ipTM=0.602 tol=7.59
2024-12-05 23:14:31,253 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.1 pTM=0.376 ipTM=0.581 tol=6.7
2024-12-05 23:18:38,475 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.7 pTM=0.362 ipTM=0.518 tol=5.17
2024-12-05 23:22:45,722 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.9 pTM=0.351 ipTM=0.44 tol=4.92
2024-12-05 23:26:52,950 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.8 pTM=0.348 ipTM=0.41 tol=3.54
2024-12-05 23:31:00,291 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.9 pTM=0.351 ipTM=0.375 tol=4.92
2024-12-05 23:35:07,648 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.7 pTM=0.351 ipTM=0.376 tol=3.67
2024-12-05 23:39:14,955 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.7 pTM=0.347 ipTM=0.377 tol=3.18
2024-12-05 23:43:22,212 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.8 pTM=0.355 ipTM=0.482 tol=5.27
2024-12-05 23:47:29,504 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.4 pTM=0.377 ipTM=0.582 tol=4.41
2024-12-05 23:51:36,776 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.3 pTM=0.374 ipTM=0.55 tol=3.57
2024-12-05 23:55:44,027 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.8 pTM=0.355 ipTM=0.458 tol=3.1
2024-12-05 23:59:51,340 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.6 pTM=0.353 ipTM=0.396 tol=3.57
2024-12-06 00:03:58,578 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.7 pTM=0.355 ipTM=0.475 tol=3.67
2024-12-06 00:08:05,905 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.1 pTM=0.379 ipTM=0.593 tol=3.91
2024-12-06 00:12:13,068 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.1 pTM=0.378 ipTM=0.585 tol=2.4
2024-12-06 00:16:20,308 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.7 pTM=0.371 ipTM=0.55 tol=3.59
2024-12-06 00:20:27,596 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.6 pTM=0.347 ipTM=0.431 tol=3.81
2024-12-06 00:24:34,827 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.2 pTM=0.341 ipTM=0.368 tol=4.61
2024-12-06 00:28:42,088 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.9 pTM=0.342 ipTM=0.362 tol=8.01
2024-12-06 00:32:49,449 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61 pTM=0.344 ipTM=0.365 tol=3.89
2024-12-06 00:36:56,808 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.2 pTM=0.351 ipTM=0.382 tol=3.14
2024-12-06 00:41:04,136 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.4 pTM=0.356 ipTM=0.413 tol=5.54
2024-12-06 00:45:11,502 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.2 pTM=0.354 ipTM=0.393 tol=3.33
2024-12-06 00:49:18,769 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.6 pTM=0.372 ipTM=0.559 tol=6.2
2024-12-06 00:49:18,772 alphafold2_multimer_v3_model_1_seed_000 took 7809.3s (30 recycles)
2024-12-06 00:53:29,624 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.4 pTM=0.303 ipTM=0.3
2024-12-06 00:57:37,429 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.5 pTM=0.308 ipTM=0.441 tol=14.8
2024-12-06 01:01:45,229 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.4 pTM=0.307 ipTM=0.391 tol=11.1
2024-12-06 01:05:53,031 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.5 pTM=0.301 ipTM=0.349 tol=12.7
2024-12-06 01:10:00,735 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.7 pTM=0.305 ipTM=0.327 tol=11.9
2024-12-06 01:14:08,301 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.7 pTM=0.329 ipTM=0.473 tol=9.65
2024-12-06 01:18:15,943 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.8 pTM=0.32 ipTM=0.388 tol=7.93
2024-12-06 01:22:23,426 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.3 pTM=0.356 ipTM=0.459 tol=17
2024-12-06 01:26:30,788 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.2 pTM=0.363 ipTM=0.374 tol=6.8
2024-12-06 01:30:38,209 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.9 pTM=0.37 ipTM=0.353 tol=4.1
2024-12-06 01:34:45,578 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.1 pTM=0.364 ipTM=0.395 tol=3.25
2024-12-06 01:38:52,903 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.7 pTM=0.39 ipTM=0.386 tol=3.06
2024-12-06 01:43:00,222 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.4 pTM=0.383 ipTM=0.346 tol=1.54
2024-12-06 01:47:07,506 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.5 pTM=0.378 ipTM=0.359 tol=1.56
2024-12-06 01:51:14,814 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.2 pTM=0.397 ipTM=0.432 tol=3.93
2024-12-06 01:55:22,195 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.2 pTM=0.393 ipTM=0.376 tol=2.21
2024-12-06 01:59:29,485 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.9 pTM=0.388 ipTM=0.36 tol=1.78
2024-12-06 02:03:36,741 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.9 pTM=0.386 ipTM=0.344 tol=1.05
2024-12-06 02:07:43,998 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.9 pTM=0.387 ipTM=0.363 tol=1.48
2024-12-06 02:11:51,196 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.2 pTM=0.399 ipTM=0.454 tol=3.08
2024-12-06 02:15:58,458 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66 pTM=0.387 ipTM=0.374 tol=2.11
2024-12-06 02:20:05,631 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.6 pTM=0.376 ipTM=0.364 tol=2.36
2024-12-06 02:24:12,854 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.1 pTM=0.394 ipTM=0.409 tol=3.83
2024-12-06 02:28:20,230 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.8 pTM=0.384 ipTM=0.362 tol=2.3
2024-12-06 02:32:27,493 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.6 pTM=0.382 ipTM=0.374 tol=1.84
2024-12-06 02:36:34,848 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.1 pTM=0.394 ipTM=0.42 tol=2.93
2024-12-06 02:40:42,063 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.1 pTM=0.393 ipTM=0.379 tol=1.31
2024-12-06 02:44:49,320 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.9 pTM=0.389 ipTM=0.364 tol=2.39
2024-12-06 02:48:56,587 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.8 pTM=0.39 ipTM=0.385 tol=2.54
2024-12-06 02:53:03,816 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.8 pTM=0.388 ipTM=0.359 tol=1.79
2024-12-06 02:57:11,105 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.6 pTM=0.385 ipTM=0.358 tol=1.64
2024-12-06 02:57:11,108 alphafold2_multimer_v3_model_2_seed_000 took 7669.1s (30 recycles)
2024-12-06 03:01:22,578 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.3 pTM=0.316 ipTM=0.621
2024-12-06 03:05:30,744 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.1 pTM=0.31 ipTM=0.521 tol=19.6
2024-12-06 03:09:38,872 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.5 pTM=0.306 ipTM=0.513 tol=10.8
2024-12-06 03:13:46,952 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.5 pTM=0.304 ipTM=0.471 tol=8.1
2024-12-06 03:17:54,983 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.2 pTM=0.311 ipTM=0.524 tol=4.86
2024-12-06 03:22:02,865 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.7 pTM=0.305 ipTM=0.471 tol=7.27
2024-12-06 03:26:10,750 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.9 pTM=0.305 ipTM=0.458 tol=5.52
2024-12-06 03:30:18,507 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.9 pTM=0.303 ipTM=0.421 tol=6.27
2024-12-06 03:34:26,492 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.3 pTM=0.308 ipTM=0.469 tol=2.98
2024-12-06 03:38:34,461 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.3 pTM=0.305 ipTM=0.428 tol=1.92
2024-12-06 03:42:42,261 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.6 pTM=0.311 ipTM=0.493 tol=4.12
2024-12-06 03:46:49,972 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.3 pTM=0.305 ipTM=0.412 tol=3.46
2024-12-06 03:50:57,825 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62 pTM=0.315 ipTM=0.534 tol=5.54
2024-12-06 03:55:05,660 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.4 pTM=0.31 ipTM=0.469 tol=4.92
2024-12-06 03:59:13,306 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.9 pTM=0.323 ipTM=0.482 tol=11.5
2024-12-06 04:03:21,025 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63 pTM=0.341 ipTM=0.522 tol=4.62
2024-12-06 04:07:28,521 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.9 pTM=0.406 ipTM=0.624 tol=5.67
2024-12-06 04:11:35,899 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.8 pTM=0.378 ipTM=0.434 tol=5.95
2024-12-06 04:15:43,332 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.2 pTM=0.388 ipTM=0.385 tol=5.54
2024-12-06 04:19:50,733 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.2 pTM=0.385 ipTM=0.366 tol=2.44
2024-12-06 04:23:58,043 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.5 pTM=0.385 ipTM=0.341 tol=3.33
2024-12-06 04:28:05,466 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.5 pTM=0.385 ipTM=0.329 tol=1.96
2024-12-06 04:32:12,848 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.2 pTM=0.384 ipTM=0.33 tol=2.09
2024-12-06 04:36:20,302 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.1 pTM=0.381 ipTM=0.321 tol=2.74
2024-12-06 04:40:27,661 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.3 pTM=0.389 ipTM=0.375 tol=3.46
2024-12-06 04:44:35,034 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.4 pTM=0.389 ipTM=0.352 tol=2.82
2024-12-06 04:48:42,479 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.7 pTM=0.392 ipTM=0.356 tol=2.89
2024-12-06 04:52:49,906 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.6 pTM=0.387 ipTM=0.338 tol=2.13
2024-12-06 04:56:57,312 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.1 pTM=0.384 ipTM=0.327 tol=2.71
2024-12-06 05:01:04,721 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.3 pTM=0.383 ipTM=0.315 tol=2.49
2024-12-06 05:05:12,050 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.1 pTM=0.381 ipTM=0.305 tol=3.83
2024-12-06 05:05:12,053 alphafold2_multimer_v3_model_3_seed_000 took 7677.7s (30 recycles)
2024-12-06 05:09:23,345 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.8 pTM=0.309 ipTM=0.45
2024-12-06 05:13:31,237 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.2 pTM=0.32 ipTM=0.502 tol=15.3
2024-12-06 05:17:39,200 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.7 pTM=0.305 ipTM=0.43 tol=9.3
2024-12-06 05:21:46,940 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.2 pTM=0.324 ipTM=0.448 tol=18.7
2024-12-06 05:25:54,552 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.2 pTM=0.352 ipTM=0.512 tol=8.44
2024-12-06 05:30:01,952 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.5 pTM=0.393 ipTM=0.478 tol=9.95
2024-12-06 05:34:09,316 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.6 pTM=0.413 ipTM=0.607 tol=14.4
2024-12-06 05:38:16,515 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.2 pTM=0.401 ipTM=0.445 tol=6.18
2024-12-06 05:42:23,853 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.5 pTM=0.39 ipTM=0.361 tol=6.35
2024-12-06 05:46:31,253 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.8 pTM=0.383 ipTM=0.309 tol=6.2
2024-12-06 05:50:38,614 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.5 pTM=0.379 ipTM=0.295 tol=4.4
2024-12-06 05:54:45,945 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.1 pTM=0.382 ipTM=0.269 tol=5.13
2024-12-06 05:58:53,277 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.2 pTM=0.38 ipTM=0.267 tol=4.08
2024-12-06 06:03:00,618 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.3 pTM=0.379 ipTM=0.266 tol=5.77
2024-12-06 06:07:08,114 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.1 pTM=0.377 ipTM=0.271 tol=4.45
2024-12-06 06:11:15,440 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.9 pTM=0.379 ipTM=0.266 tol=6.92
2024-12-06 06:15:22,859 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.6 pTM=0.379 ipTM=0.275 tol=5.48
2024-12-06 06:19:30,310 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.8 pTM=0.384 ipTM=0.271 tol=4.82
2024-12-06 06:23:37,674 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.9 pTM=0.389 ipTM=0.276 tol=8.59
2024-12-06 06:27:45,190 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64 pTM=0.385 ipTM=0.269 tol=5.06
2024-12-06 06:31:52,637 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.6 pTM=0.384 ipTM=0.274 tol=2.9
2024-12-06 06:36:00,046 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.1 pTM=0.386 ipTM=0.267 tol=1.75
2024-12-06 06:40:07,575 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.4 pTM=0.386 ipTM=0.272 tol=1.86
2024-12-06 06:44:15,115 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.8 pTM=0.386 ipTM=0.27 tol=1.89
2024-12-06 06:48:22,612 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.6 pTM=0.384 ipTM=0.268 tol=3.96
2024-12-06 06:52:30,075 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.8 pTM=0.386 ipTM=0.268 tol=2.43
2024-12-06 06:56:37,580 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.9 pTM=0.387 ipTM=0.271 tol=2.71
2024-12-06 07:00:45,020 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.1 pTM=0.388 ipTM=0.27 tol=3.94
2024-12-06 07:04:52,540 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.8 pTM=0.384 ipTM=0.275 tol=2.22
2024-12-06 07:09:00,027 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.9 pTM=0.387 ipTM=0.272 tol=4.95
2024-12-06 07:13:07,500 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.5 pTM=0.389 ipTM=0.274 tol=4.25
2024-12-06 07:13:07,503 alphafold2_multimer_v3_model_4_seed_000 took 7672.2s (30 recycles)
2024-12-06 07:17:18,584 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.2 pTM=0.292 ipTM=0.278
2024-12-06 07:21:26,099 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.6 pTM=0.321 ipTM=0.587 tol=15
2024-12-06 07:25:33,438 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.4 pTM=0.365 ipTM=0.611 tol=13.2
2024-12-06 07:29:40,767 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.4 pTM=0.383 ipTM=0.448 tol=6.64
2024-12-06 07:33:48,062 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.8 pTM=0.39 ipTM=0.412 tol=5.03
2024-12-06 07:37:55,261 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.8 pTM=0.378 ipTM=0.369 tol=6.38
2024-12-06 07:42:02,538 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.6 pTM=0.383 ipTM=0.369 tol=5.92
2024-12-06 07:46:09,737 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.1 pTM=0.386 ipTM=0.372 tol=3.27
2024-12-06 07:50:16,927 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.1 pTM=0.386 ipTM=0.353 tol=2.54
2024-12-06 07:54:24,263 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.2 pTM=0.384 ipTM=0.362 tol=3.82
2024-12-06 07:58:31,593 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.3 pTM=0.386 ipTM=0.352 tol=1.96
2024-12-06 08:02:38,874 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.2 pTM=0.391 ipTM=0.375 tol=2.63
2024-12-06 08:06:46,067 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.5 pTM=0.39 ipTM=0.348 tol=2.5
2024-12-06 08:10:53,349 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.4 pTM=0.388 ipTM=0.356 tol=3.88
2024-12-06 08:15:00,607 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.4 pTM=0.389 ipTM=0.346 tol=3.33
2024-12-06 08:19:07,859 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.6 pTM=0.391 ipTM=0.357 tol=3.48
2024-12-06 08:23:15,217 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.7 pTM=0.391 ipTM=0.348 tol=2.5
2024-12-06 08:27:22,446 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.6 pTM=0.39 ipTM=0.356 tol=4.81
2024-12-06 08:31:29,736 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.5 pTM=0.389 ipTM=0.333 tol=4.68
2024-12-06 08:35:37,060 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.4 pTM=0.389 ipTM=0.343 tol=3.29
2024-12-06 08:39:44,247 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.5 pTM=0.388 ipTM=0.337 tol=4.41
2024-12-06 08:43:51,504 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.4 pTM=0.386 ipTM=0.345 tol=3.43
2024-12-06 08:47:58,725 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.2 pTM=0.388 ipTM=0.334 tol=2.73
2024-12-06 08:52:05,893 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.1 pTM=0.389 ipTM=0.361 tol=2.06
2024-12-06 08:56:13,204 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.4 pTM=0.388 ipTM=0.35 tol=5.42
2024-12-06 09:00:20,477 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.2 pTM=0.39 ipTM=0.371 tol=5.12
2024-12-06 09:04:27,806 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.7 pTM=0.393 ipTM=0.364 tol=2.1
2024-12-06 09:08:34,960 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.6 pTM=0.395 ipTM=0.376 tol=2.42
2024-12-06 09:12:42,026 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.6 pTM=0.393 ipTM=0.361 tol=2.28
2024-12-06 09:16:49,259 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.6 pTM=0.393 ipTM=0.371 tol=3.07
2024-12-06 09:20:56,468 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.4 pTM=0.391 ipTM=0.346 tol=3.67
2024-12-06 09:20:56,471 alphafold2_multimer_v3_model_5_seed_000 took 7665.7s (30 recycles)
2024-12-06 09:20:59,668 reranking models by 'multimer' metric
2024-12-06 09:21:03,446 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 09:30:16,932 Relaxation took 557.3s
2024-12-06 09:30:16,933 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.6 pTM=0.372 ipTM=0.559
2024-12-06 09:36:05,245 Relaxation took 348.3s
2024-12-06 09:36:05,245 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.6 pTM=0.385 ipTM=0.358
2024-12-06 09:41:50,852 Relaxation took 345.6s
2024-12-06 09:41:50,852 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.4 pTM=0.391 ipTM=0.346
2024-12-06 09:48:31,327 Relaxation took 400.5s
2024-12-06 09:48:31,327 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.1 pTM=0.381 ipTM=0.305
2024-12-06 09:56:00,793 Relaxation took 449.5s
2024-12-06 09:56:00,794 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.5 pTM=0.389 ipTM=0.274
2024-12-06 09:56:07,905 Done