2024-12-05 22:27:04,713 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 22:27:05,019 Running on GPU 2024-12-05 22:27:08,840 Found 6 citations for tools or databases 2024-12-05 22:27:08,840 Query 1/1: FBXO2_BMP1 (length 1282) 2024-12-05 22:27:09,158 Sleeping for 5s. Reason: PENDING 2024-12-05 22:27:14,419 Sleeping for 5s. Reason: RUNNING 2024-12-05 22:27:19,674 Sleeping for 8s. Reason: RUNNING 2024-12-05 22:27:27,933 Sleeping for 10s. Reason: RUNNING 2024-12-05 22:27:38,190 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:27:45,444 Sleeping for 6s. Reason: RUNNING 2024-12-05 22:27:51,701 Sleeping for 9s. Reason: RUNNING 2024-12-05 22:28:00,960 Sleeping for 9s. Reason: RUNNING 2024-12-05 22:28:10,217 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:28:17,482 Sleeping for 6s. Reason: RUNNING 2024-12-05 22:28:23,742 Sleeping for 8s. Reason: RUNNING 2024-12-05 22:28:31,997 Sleeping for 9s. Reason: RUNNING 2024-12-05 22:28:41,253 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:28:48,510 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:28:55,766 Sleeping for 9s. Reason: RUNNING 2024-12-05 22:29:05,025 Sleeping for 8s. Reason: RUNNING 2024-12-05 22:29:13,280 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:29:20,534 Sleeping for 5s. Reason: RUNNING 2024-12-05 22:29:25,790 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:29:33,054 Sleeping for 10s. Reason: RUNNING 2024-12-05 22:29:43,316 Sleeping for 5s. Reason: RUNNING 2024-12-05 22:29:48,567 Sleeping for 5s. Reason: RUNNING 2024-12-05 22:29:53,831 Sleeping for 6s. Reason: RUNNING 2024-12-05 22:30:00,087 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:30:07,343 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:30:14,602 Sleeping for 8s. Reason: RUNNING 2024-12-05 22:30:22,865 Sleeping for 5s. Reason: RUNNING 2024-12-05 22:30:28,118 Sleeping for 10s. Reason: RUNNING 2024-12-05 22:30:38,378 Sleeping for 6s. Reason: RUNNING 2024-12-05 22:30:44,638 Sleeping for 6s. Reason: RUNNING 2024-12-05 22:30:52,998 Sleeping for 6s. Reason: PENDING 2024-12-05 22:30:59,273 Sleeping for 5s. Reason: RUNNING 2024-12-05 22:31:04,526 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:31:11,780 Sleeping for 8s. Reason: RUNNING 2024-12-05 22:31:20,035 Sleeping for 6s. Reason: RUNNING 2024-12-05 22:31:26,288 Sleeping for 5s. Reason: RUNNING 2024-12-05 22:31:31,543 Sleeping for 5s. Reason: RUNNING 2024-12-05 22:31:36,800 Sleeping for 8s. Reason: RUNNING 2024-12-05 22:31:45,067 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:31:52,328 Sleeping for 10s. Reason: RUNNING 2024-12-05 22:32:02,590 Sleeping for 5s. Reason: RUNNING 2024-12-05 22:32:07,844 Sleeping for 5s. Reason: RUNNING 2024-12-05 22:32:13,103 Sleeping for 9s. Reason: RUNNING 2024-12-05 22:32:22,367 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:32:29,623 Sleeping for 8s. Reason: RUNNING 2024-12-05 22:32:37,877 Sleeping for 7s. Reason: RUNNING 2024-12-05 22:32:45,138 Sleeping for 9s. Reason: RUNNING 2024-12-05 22:33:00,707 Setting max_seq=508, max_extra_seq=2048 2024-12-05 22:36:13,738 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=75.4 pTM=0.459 ipTM=0.193 2024-12-05 22:36:56,043 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74.7 pTM=0.463 ipTM=0.213 tol=13.2 2024-12-05 22:37:38,457 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.7 pTM=0.464 ipTM=0.205 tol=9.44 2024-12-05 22:38:21,018 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.6 pTM=0.462 ipTM=0.221 tol=5.79 2024-12-05 22:39:03,642 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=75.2 pTM=0.463 ipTM=0.235 tol=1.77 2024-12-05 22:39:46,238 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=75.3 pTM=0.461 ipTM=0.21 tol=3.24 2024-12-05 22:40:28,855 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.6 pTM=0.465 ipTM=0.228 tol=2.3 2024-12-05 22:41:11,493 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75.2 pTM=0.459 ipTM=0.203 tol=2.87 2024-12-05 22:41:54,133 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74.9 pTM=0.456 ipTM=0.207 tol=1.84 2024-12-05 22:42:36,809 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=75 pTM=0.454 ipTM=0.197 tol=1.58 2024-12-05 22:43:19,498 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.1 pTM=0.453 ipTM=0.192 tol=2.14 2024-12-05 22:44:02,196 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.6 pTM=0.451 ipTM=0.192 tol=1.75 2024-12-05 22:44:44,899 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.9 pTM=0.452 ipTM=0.19 tol=1.43 2024-12-05 22:45:27,580 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74.7 pTM=0.452 ipTM=0.197 tol=1.46 2024-12-05 22:46:10,253 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75 pTM=0.451 ipTM=0.184 tol=2.02 2024-12-05 22:46:52,961 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.8 pTM=0.45 ipTM=0.186 tol=1.26 2024-12-05 22:47:35,660 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75 pTM=0.452 ipTM=0.186 tol=1.25 2024-12-05 22:48:18,336 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.8 pTM=0.45 ipTM=0.187 tol=1.16 2024-12-05 22:49:01,007 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.5 pTM=0.448 ipTM=0.185 tol=0.965 2024-12-05 22:49:43,689 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=75.1 pTM=0.452 ipTM=0.191 tol=1.32 2024-12-05 22:50:26,415 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.8 pTM=0.447 ipTM=0.185 tol=3.35 2024-12-05 22:51:09,114 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.7 pTM=0.448 ipTM=0.185 tol=2.21 2024-12-05 22:51:51,784 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.6 pTM=0.445 ipTM=0.181 tol=2.12 2024-12-05 22:52:34,475 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.7 pTM=0.45 ipTM=0.19 tol=1.87 2024-12-05 22:53:17,206 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.9 pTM=0.449 ipTM=0.184 tol=1.83 2024-12-05 22:53:59,887 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75 pTM=0.456 ipTM=0.193 tol=3.31 2024-12-05 22:54:42,573 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.1 pTM=0.454 ipTM=0.187 tol=1.32 2024-12-05 22:55:25,254 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.1 pTM=0.454 ipTM=0.189 tol=1.69 2024-12-05 22:56:07,977 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=75 pTM=0.451 ipTM=0.184 tol=1.4 2024-12-05 22:56:50,687 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=75.2 pTM=0.453 ipTM=0.194 tol=1.77 2024-12-05 22:57:33,395 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.6 pTM=0.449 ipTM=0.186 tol=1.49 2024-12-05 22:57:33,397 alphafold2_multimer_v3_model_1_seed_000 took 1467.5s (30 recycles) 2024-12-05 22:58:17,158 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=76.4 pTM=0.467 ipTM=0.228 2024-12-05 22:58:59,978 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.9 pTM=0.461 ipTM=0.18 tol=8.43 2024-12-05 22:59:42,733 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=76.4 pTM=0.467 ipTM=0.189 tol=5.04 2024-12-05 23:00:25,522 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.8 pTM=0.463 ipTM=0.177 tol=4.06 2024-12-05 23:01:08,277 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.9 pTM=0.463 ipTM=0.184 tol=2.21 2024-12-05 23:01:51,091 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.8 pTM=0.463 ipTM=0.177 tol=2.07 2024-12-05 23:02:33,890 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=77.1 pTM=0.462 ipTM=0.186 tol=6.16 2024-12-05 23:03:16,661 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=77.3 pTM=0.464 ipTM=0.182 tol=2.77 2024-12-05 23:03:59,505 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.9 pTM=0.462 ipTM=0.185 tol=3.98 2024-12-05 23:04:42,350 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=77.2 pTM=0.464 ipTM=0.185 tol=3.85 2024-12-05 23:05:25,120 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.9 pTM=0.463 ipTM=0.182 tol=4.27 2024-12-05 23:06:07,908 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=77.1 pTM=0.461 ipTM=0.183 tol=1.67 2024-12-05 23:06:50,709 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=77.1 pTM=0.461 ipTM=0.182 tol=3.13 2024-12-05 23:07:33,501 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=77.1 pTM=0.462 ipTM=0.184 tol=3.27 2024-12-05 23:08:16,271 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=77.1 pTM=0.463 ipTM=0.184 tol=1.9 2024-12-05 23:08:59,045 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=76.9 pTM=0.464 ipTM=0.183 tol=2.83 2024-12-05 23:09:41,830 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=77.2 pTM=0.463 ipTM=0.183 tol=2.48 2024-12-05 23:10:24,582 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=77.4 pTM=0.466 ipTM=0.183 tol=1.99 2024-12-05 23:11:07,329 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=77.1 pTM=0.464 ipTM=0.184 tol=3.22 2024-12-05 23:11:50,091 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=77.1 pTM=0.464 ipTM=0.181 tol=3.02 2024-12-05 23:12:32,843 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=77 pTM=0.463 ipTM=0.188 tol=2.95 2024-12-05 23:13:15,644 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=76.8 pTM=0.46 ipTM=0.181 tol=2.33 2024-12-05 23:13:58,446 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=77.2 pTM=0.461 ipTM=0.185 tol=1.76 2024-12-05 23:14:41,252 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=77.1 pTM=0.46 ipTM=0.18 tol=1.22 2024-12-05 23:15:24,058 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=77.1 pTM=0.462 ipTM=0.185 tol=1.24 2024-12-05 23:16:06,836 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=77 pTM=0.462 ipTM=0.183 tol=1.42 2024-12-05 23:16:49,635 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=77.1 pTM=0.462 ipTM=0.183 tol=2.32 2024-12-05 23:17:32,422 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=77.1 pTM=0.462 ipTM=0.181 tol=1.8 2024-12-05 23:18:15,203 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=77.4 pTM=0.464 ipTM=0.185 tol=6.09 2024-12-05 23:18:57,938 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=77.7 pTM=0.468 ipTM=0.184 tol=3.3 2024-12-05 23:19:40,651 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=77.8 pTM=0.47 ipTM=0.188 tol=2.39 2024-12-05 23:19:40,653 alphafold2_multimer_v3_model_2_seed_000 took 1326.3s (30 recycles) 2024-12-05 23:20:24,459 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.6 pTM=0.482 ipTM=0.274 2024-12-05 23:21:07,278 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.4 pTM=0.462 ipTM=0.226 tol=13.3 2024-12-05 23:21:49,925 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.9 pTM=0.557 ipTM=0.578 tol=9.59 2024-12-05 23:22:32,583 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.8 pTM=0.576 ipTM=0.63 tol=5.63 2024-12-05 23:23:15,257 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=79.8 pTM=0.572 ipTM=0.612 tol=2.3 2024-12-05 23:23:57,929 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=79.8 pTM=0.569 ipTM=0.593 tol=1.55 2024-12-05 23:24:40,622 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=80.1 pTM=0.571 ipTM=0.597 tol=1.97 2024-12-05 23:25:23,315 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79.9 pTM=0.57 ipTM=0.599 tol=1 2024-12-05 23:26:05,983 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.6 pTM=0.566 ipTM=0.589 tol=0.754 2024-12-05 23:26:48,663 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=79.9 pTM=0.572 ipTM=0.604 tol=0.755 2024-12-05 23:27:31,355 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79.7 pTM=0.568 ipTM=0.596 tol=0.992 2024-12-05 23:28:14,047 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79.8 pTM=0.571 ipTM=0.604 tol=0.515 2024-12-05 23:28:56,714 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=79.6 pTM=0.569 ipTM=0.61 tol=0.749 2024-12-05 23:29:39,364 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=79.9 pTM=0.575 ipTM=0.622 tol=0.728 2024-12-05 23:30:22,024 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.9 pTM=0.575 ipTM=0.622 tol=0.363 2024-12-05 23:30:22,025 alphafold2_multimer_v3_model_3_seed_000 took 640.4s (14 recycles) 2024-12-05 23:31:05,714 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76 pTM=0.47 ipTM=0.23 2024-12-05 23:31:48,483 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=76.6 pTM=0.461 ipTM=0.191 tol=9.03 2024-12-05 23:32:31,291 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.1 pTM=0.467 ipTM=0.185 tol=5.34 2024-12-05 23:33:14,062 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.6 pTM=0.456 ipTM=0.165 tol=4.45 2024-12-05 23:33:56,863 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.6 pTM=0.456 ipTM=0.162 tol=2.2 2024-12-05 23:34:39,727 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.1 pTM=0.454 ipTM=0.152 tol=6.86 2024-12-05 23:35:22,594 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=76.6 pTM=0.455 ipTM=0.153 tol=6.58 2024-12-05 23:36:05,467 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=76.8 pTM=0.453 ipTM=0.153 tol=3.98 2024-12-05 23:36:48,323 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=76 pTM=0.45 ipTM=0.153 tol=4.6 2024-12-05 23:37:31,202 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=76.5 pTM=0.45 ipTM=0.154 tol=6.52 2024-12-05 23:38:14,030 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=76.4 pTM=0.456 ipTM=0.161 tol=5.34 2024-12-05 23:38:56,840 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=76.4 pTM=0.457 ipTM=0.16 tol=3.44 2024-12-05 23:39:39,671 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=76.7 pTM=0.456 ipTM=0.157 tol=2.31 2024-12-05 23:40:22,472 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.3 pTM=0.457 ipTM=0.169 tol=3.68 2024-12-05 23:41:05,276 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=76.8 pTM=0.458 ipTM=0.16 tol=2.13 2024-12-05 23:41:48,059 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=76.2 pTM=0.458 ipTM=0.162 tol=3.04 2024-12-05 23:42:30,833 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.1 pTM=0.46 ipTM=0.156 tol=4.01 2024-12-05 23:43:13,604 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=76.9 pTM=0.463 ipTM=0.17 tol=5.55 2024-12-05 23:43:56,378 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=76.6 pTM=0.458 ipTM=0.168 tol=2.59 2024-12-05 23:44:39,181 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.2 pTM=0.465 ipTM=0.164 tol=1.52 2024-12-05 23:45:21,949 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=76.6 pTM=0.463 ipTM=0.168 tol=2.36 2024-12-05 23:46:04,712 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.1 pTM=0.461 ipTM=0.156 tol=3.2 2024-12-05 23:46:47,488 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=76.7 pTM=0.461 ipTM=0.167 tol=1.57 2024-12-05 23:47:30,281 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=76.9 pTM=0.458 ipTM=0.158 tol=1.72 2024-12-05 23:48:13,068 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=76.6 pTM=0.461 ipTM=0.168 tol=2.52 2024-12-05 23:48:55,859 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=76.6 pTM=0.456 ipTM=0.158 tol=6.86 2024-12-05 23:49:38,623 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77 pTM=0.46 ipTM=0.156 tol=5.24 2024-12-05 23:50:21,420 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=76.9 pTM=0.461 ipTM=0.156 tol=3.39 2024-12-05 23:51:04,233 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.1 pTM=0.464 ipTM=0.162 tol=2.82 2024-12-05 23:51:47,054 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=76.8 pTM=0.463 ipTM=0.164 tol=2.19 2024-12-05 23:52:29,887 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=76.7 pTM=0.458 ipTM=0.154 tol=2.76 2024-12-05 23:52:29,888 alphafold2_multimer_v3_model_4_seed_000 took 1326.9s (30 recycles) 2024-12-05 23:53:13,703 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.9 pTM=0.463 ipTM=0.202 2024-12-05 23:53:56,545 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75 pTM=0.45 ipTM=0.167 tol=18.1 2024-12-05 23:54:39,342 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76.4 pTM=0.468 ipTM=0.176 tol=6.43 2024-12-05 23:55:22,212 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.6 pTM=0.459 ipTM=0.165 tol=17.8 2024-12-05 23:56:05,014 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.9 pTM=0.457 ipTM=0.162 tol=8.42 2024-12-05 23:56:47,772 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=77.2 pTM=0.481 ipTM=0.27 tol=18 2024-12-05 23:57:30,562 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=77.5 pTM=0.481 ipTM=0.258 tol=2.74 2024-12-05 23:58:13,331 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=76.9 pTM=0.471 ipTM=0.199 tol=4.09 2024-12-05 23:58:56,098 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=76.1 pTM=0.466 ipTM=0.186 tol=1.57 2024-12-05 23:59:38,908 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76.7 pTM=0.467 ipTM=0.17 tol=2.44 2024-12-06 00:00:21,676 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.6 pTM=0.467 ipTM=0.167 tol=1.4 2024-12-06 00:01:04,463 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.1 pTM=0.466 ipTM=0.161 tol=9.34 2024-12-06 00:01:47,318 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=75.6 pTM=0.458 ipTM=0.159 tol=6.65 2024-12-06 00:02:30,165 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.2 pTM=0.46 ipTM=0.158 tol=6.2 2024-12-06 00:03:12,976 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.4 pTM=0.463 ipTM=0.159 tol=1.91 2024-12-06 00:03:55,774 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.4 pTM=0.474 ipTM=0.228 tol=8.04 2024-12-06 00:04:38,525 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=77.1 pTM=0.475 ipTM=0.223 tol=3.45 2024-12-06 00:05:21,296 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.8 pTM=0.469 ipTM=0.179 tol=3.73 2024-12-06 00:06:04,054 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.1 pTM=0.463 ipTM=0.163 tol=3.7 2024-12-06 00:06:46,833 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.4 pTM=0.465 ipTM=0.161 tol=1.6 2024-12-06 00:07:29,621 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=76.4 pTM=0.465 ipTM=0.162 tol=1.75 2024-12-06 00:08:12,407 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.3 pTM=0.464 ipTM=0.161 tol=1.11 2024-12-06 00:08:55,188 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76.2 pTM=0.463 ipTM=0.162 tol=1.63 2024-12-06 00:09:37,973 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=76.2 pTM=0.461 ipTM=0.162 tol=2.12 2024-12-06 00:10:20,754 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76.2 pTM=0.465 ipTM=0.175 tol=2.38 2024-12-06 00:11:03,520 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.2 pTM=0.463 ipTM=0.169 tol=1.18 2024-12-06 00:11:46,293 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=76.2 pTM=0.464 ipTM=0.164 tol=2.26 2024-12-06 00:12:29,066 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.2 pTM=0.464 ipTM=0.159 tol=2.5 2024-12-06 00:13:11,843 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.4 pTM=0.466 ipTM=0.162 tol=2.49 2024-12-06 00:13:54,599 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.6 pTM=0.464 ipTM=0.162 tol=3.04 2024-12-06 00:14:37,355 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.5 pTM=0.466 ipTM=0.162 tol=3.12 2024-12-06 00:14:37,356 alphafold2_multimer_v3_model_5_seed_000 took 1326.5s (30 recycles) 2024-12-06 00:14:38,351 reranking models by 'multimer' metric 2024-12-06 00:14:39,731 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 00:16:11,884 Relaxation took 93.5s 2024-12-06 00:16:11,885 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=79.9 pTM=0.575 ipTM=0.622 2024-12-06 00:18:42,830 Relaxation took 150.9s 2024-12-06 00:18:42,830 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=77.8 pTM=0.47 ipTM=0.188 2024-12-06 00:20:31,681 Relaxation took 108.8s 2024-12-06 00:20:31,681 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.6 pTM=0.449 ipTM=0.186 2024-12-06 00:22:26,591 Relaxation took 114.9s 2024-12-06 00:22:26,591 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.5 pTM=0.466 ipTM=0.162 2024-12-06 00:25:23,108 Relaxation took 176.5s 2024-12-06 00:25:23,109 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=76.7 pTM=0.458 ipTM=0.154 2024-12-06 00:25:26,060 Done