2024-12-05 23:30:27,844 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 23:30:28,149 Running on GPU 2024-12-05 23:30:31,679 Found 6 citations for tools or databases 2024-12-05 23:30:31,679 Query 1/1: FBXO2_FOLR3 (length 541) 2024-12-05 23:30:31,992 Sleeping for 8s. Reason: PENDING 2024-12-05 23:30:40,250 Sleeping for 10s. Reason: RUNNING 2024-12-05 23:30:50,510 Sleeping for 8s. Reason: RUNNING 2024-12-05 23:30:58,771 Sleeping for 10s. Reason: RUNNING 2024-12-05 23:31:09,031 Sleeping for 9s. Reason: RUNNING 2024-12-05 23:31:18,290 Sleeping for 7s. Reason: RUNNING 2024-12-05 23:31:25,550 Sleeping for 9s. Reason: RUNNING 2024-12-05 23:31:34,805 Sleeping for 9s. Reason: RUNNING 2024-12-05 23:31:44,069 Sleeping for 10s. Reason: RUNNING 2024-12-05 23:31:54,327 Sleeping for 5s. Reason: RUNNING 2024-12-05 23:31:59,587 Sleeping for 7s. Reason: RUNNING 2024-12-05 23:32:08,154 Sleeping for 6s. Reason: PENDING 2024-12-05 23:32:14,410 Sleeping for 6s. Reason: RUNNING 2024-12-05 23:32:20,660 Sleeping for 8s. Reason: RUNNING 2024-12-05 23:32:28,918 Sleeping for 6s. Reason: RUNNING 2024-12-05 23:32:35,180 Sleeping for 8s. Reason: RUNNING 2024-12-05 23:32:43,444 Sleeping for 9s. Reason: RUNNING 2024-12-05 23:32:52,703 Sleeping for 8s. Reason: RUNNING 2024-12-05 23:33:02,274 Setting max_seq=508, max_extra_seq=2048 2024-12-05 23:35:56,676 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.9 pTM=0.473 ipTM=0.221 2024-12-05 23:36:04,109 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.8 pTM=0.479 ipTM=0.18 tol=7.78 2024-12-05 23:36:11,520 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=77.5 pTM=0.497 ipTM=0.167 tol=4.63 2024-12-05 23:36:18,933 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78 pTM=0.509 ipTM=0.19 tol=3.45 2024-12-05 23:36:26,359 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.8 pTM=0.502 ipTM=0.18 tol=3.72 2024-12-05 23:36:33,789 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77.9 pTM=0.514 ipTM=0.202 tol=6.05 2024-12-05 23:36:41,231 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78.2 pTM=0.503 ipTM=0.182 tol=8.23 2024-12-05 23:36:48,668 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=77.8 pTM=0.503 ipTM=0.182 tol=1.28 2024-12-05 23:36:56,099 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.8 pTM=0.518 ipTM=0.221 tol=1.71 2024-12-05 23:37:03,537 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=78.4 pTM=0.52 ipTM=0.218 tol=3.87 2024-12-05 23:37:10,971 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=78.1 pTM=0.519 ipTM=0.22 tol=1.99 2024-12-05 23:37:18,411 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=78.2 pTM=0.511 ipTM=0.208 tol=2.71 2024-12-05 23:37:25,855 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=77.7 pTM=0.509 ipTM=0.196 tol=4.74 2024-12-05 23:37:33,306 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=78.4 pTM=0.512 ipTM=0.203 tol=2.74 2024-12-05 23:37:40,763 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78 pTM=0.506 ipTM=0.184 tol=1.65 2024-12-05 23:37:48,219 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=78.2 pTM=0.505 ipTM=0.191 tol=2.19 2024-12-05 23:37:55,663 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=77.8 pTM=0.5 ipTM=0.182 tol=2.83 2024-12-05 23:38:03,105 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=78.1 pTM=0.514 ipTM=0.212 tol=1.79 2024-12-05 23:38:10,549 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.1 pTM=0.523 ipTM=0.235 tol=1.66 2024-12-05 23:38:17,999 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=78.1 pTM=0.507 ipTM=0.198 tol=1.18 2024-12-05 23:38:25,448 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=77.8 pTM=0.507 ipTM=0.193 tol=1.26 2024-12-05 23:38:32,901 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=77.9 pTM=0.504 ipTM=0.19 tol=0.684 2024-12-05 23:38:40,359 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=77.9 pTM=0.514 ipTM=0.213 tol=3.06 2024-12-05 23:38:47,808 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=78.1 pTM=0.519 ipTM=0.227 tol=1.42 2024-12-05 23:38:55,257 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=77.9 pTM=0.507 ipTM=0.2 tol=2.53 2024-12-05 23:39:02,700 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=77.8 pTM=0.516 ipTM=0.217 tol=2.82 2024-12-05 23:39:10,142 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=77.9 pTM=0.513 ipTM=0.209 tol=3.11 2024-12-05 23:39:17,584 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=77.8 pTM=0.521 ipTM=0.229 tol=3.96 2024-12-05 23:39:25,033 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=78.2 pTM=0.506 ipTM=0.191 tol=4.93 2024-12-05 23:39:32,489 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=77.5 pTM=0.504 ipTM=0.189 tol=3.93 2024-12-05 23:39:39,946 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=77.9 pTM=0.498 ipTM=0.176 tol=0.707 2024-12-05 23:39:39,947 alphafold2_multimer_v3_model_1_seed_000 took 392.7s (30 recycles) 2024-12-05 23:39:47,606 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.3 pTM=0.481 ipTM=0.165 2024-12-05 23:39:55,073 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=77.6 pTM=0.502 ipTM=0.164 tol=5.69 2024-12-05 23:40:02,516 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.8 pTM=0.507 ipTM=0.178 tol=3.44 2024-12-05 23:40:09,975 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78.4 pTM=0.519 ipTM=0.198 tol=7.04 2024-12-05 23:40:17,435 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.4 pTM=0.516 ipTM=0.2 tol=8.1 2024-12-05 23:40:24,895 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.5 pTM=0.52 ipTM=0.2 tol=2.04 2024-12-05 23:40:32,353 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.6 pTM=0.528 ipTM=0.223 tol=1.45 2024-12-05 23:40:39,814 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=78.8 pTM=0.513 ipTM=0.188 tol=3.45 2024-12-05 23:40:47,268 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=78.2 pTM=0.513 ipTM=0.187 tol=2.18 2024-12-05 23:40:54,732 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=78.8 pTM=0.51 ipTM=0.181 tol=1.96 2024-12-05 23:41:02,192 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=78.5 pTM=0.518 ipTM=0.198 tol=1.46 2024-12-05 23:41:09,648 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=78.7 pTM=0.511 ipTM=0.186 tol=3.21 2024-12-05 23:41:17,100 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78.2 pTM=0.511 ipTM=0.184 tol=8.02 2024-12-05 23:41:24,565 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.8 pTM=0.51 ipTM=0.176 tol=2.05 2024-12-05 23:41:32,018 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=78.2 pTM=0.508 ipTM=0.171 tol=0.66 2024-12-05 23:41:39,480 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.6 pTM=0.5 ipTM=0.163 tol=2.48 2024-12-05 23:41:46,938 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.2 pTM=0.509 ipTM=0.183 tol=1.83 2024-12-05 23:41:54,386 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.8 pTM=0.512 ipTM=0.184 tol=3.19 2024-12-05 23:42:01,833 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.2 pTM=0.514 ipTM=0.188 tol=1.72 2024-12-05 23:42:09,287 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=78.6 pTM=0.511 ipTM=0.176 tol=1.5 2024-12-05 23:42:16,739 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78.1 pTM=0.515 ipTM=0.187 tol=5.54 2024-12-05 23:42:24,193 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.8 pTM=0.508 ipTM=0.171 tol=4.54 2024-12-05 23:42:31,648 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.2 pTM=0.51 ipTM=0.181 tol=1.54 2024-12-05 23:42:39,110 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.7 pTM=0.502 ipTM=0.161 tol=1.62 2024-12-05 23:42:46,557 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=78.2 pTM=0.511 ipTM=0.185 tol=0.878 2024-12-05 23:42:54,021 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.6 pTM=0.5 ipTM=0.159 tol=1.28 2024-12-05 23:43:01,477 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.3 pTM=0.509 ipTM=0.176 tol=5.55 2024-12-05 23:43:08,932 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.6 pTM=0.511 ipTM=0.177 tol=6.2 2024-12-05 23:43:16,386 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=78.4 pTM=0.51 ipTM=0.174 tol=0.928 2024-12-05 23:43:23,845 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=78.5 pTM=0.508 ipTM=0.174 tol=1.05 2024-12-05 23:43:31,292 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.1 pTM=0.511 ipTM=0.178 tol=3.65 2024-12-05 23:43:31,293 alphafold2_multimer_v3_model_2_seed_000 took 231.1s (30 recycles) 2024-12-05 23:43:38,952 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=75.5 pTM=0.501 ipTM=0.19 2024-12-05 23:43:46,434 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=77.4 pTM=0.499 ipTM=0.158 tol=4.02 2024-12-05 23:43:53,894 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=76.8 pTM=0.5 ipTM=0.153 tol=3.26 2024-12-05 23:44:01,372 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.9 pTM=0.509 ipTM=0.175 tol=3.8 2024-12-05 23:44:08,833 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=77.6 pTM=0.504 ipTM=0.167 tol=5.09 2024-12-05 23:44:16,297 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.8 pTM=0.507 ipTM=0.176 tol=3.56 2024-12-05 23:44:23,758 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=79.5 pTM=0.539 ipTM=0.273 tol=5.96 2024-12-05 23:44:31,221 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79.1 pTM=0.499 ipTM=0.159 tol=4.02 2024-12-05 23:44:38,693 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77.8 pTM=0.495 ipTM=0.148 tol=4.64 2024-12-05 23:44:46,166 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.7 pTM=0.493 ipTM=0.141 tol=4.12 2024-12-05 23:44:53,625 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=77.6 pTM=0.493 ipTM=0.142 tol=5.04 2024-12-05 23:45:01,085 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.5 pTM=0.497 ipTM=0.156 tol=2.79 2024-12-05 23:45:08,548 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.3 pTM=0.492 ipTM=0.141 tol=4.58 2024-12-05 23:45:16,007 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.6 pTM=0.493 ipTM=0.141 tol=5 2024-12-05 23:45:23,478 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.8 pTM=0.497 ipTM=0.149 tol=2.09 2024-12-05 23:45:30,947 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79 pTM=0.497 ipTM=0.155 tol=5.26 2024-12-05 23:45:38,410 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.2 pTM=0.481 ipTM=0.12 tol=6.44 2024-12-05 23:45:45,880 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77.4 pTM=0.488 ipTM=0.13 tol=2.04 2024-12-05 23:45:53,337 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.1 pTM=0.53 ipTM=0.258 tol=7.4 2024-12-05 23:46:00,802 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=78.7 pTM=0.492 ipTM=0.14 tol=5.56 2024-12-05 23:46:08,267 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.1 pTM=0.489 ipTM=0.132 tol=6.51 2024-12-05 23:46:15,741 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.8 pTM=0.488 ipTM=0.13 tol=6.02 2024-12-05 23:46:23,213 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.6 pTM=0.493 ipTM=0.138 tol=4.1 2024-12-05 23:46:30,679 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.6 pTM=0.5 ipTM=0.156 tol=3.26 2024-12-05 23:46:38,140 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.5 pTM=0.499 ipTM=0.151 tol=2.17 2024-12-05 23:46:45,606 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.7 pTM=0.5 ipTM=0.153 tol=1.36 2024-12-05 23:46:53,068 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.6 pTM=0.503 ipTM=0.161 tol=1.16 2024-12-05 23:47:00,536 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.8 pTM=0.501 ipTM=0.158 tol=1.62 2024-12-05 23:47:07,994 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.7 pTM=0.507 ipTM=0.173 tol=1.43 2024-12-05 23:47:15,463 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.8 pTM=0.503 ipTM=0.164 tol=0.938 2024-12-05 23:47:22,928 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.8 pTM=0.508 ipTM=0.176 tol=1.17 2024-12-05 23:47:22,928 alphafold2_multimer_v3_model_3_seed_000 took 231.4s (30 recycles) 2024-12-05 23:47:30,612 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.6 pTM=0.478 ipTM=0.137 2024-12-05 23:47:38,095 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.5 pTM=0.481 ipTM=0.112 tol=5.27 2024-12-05 23:47:45,577 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.7 pTM=0.485 ipTM=0.118 tol=9.36 2024-12-05 23:47:53,061 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=78.1 pTM=0.488 ipTM=0.12 tol=4.64 2024-12-05 23:48:00,543 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=78.1 pTM=0.495 ipTM=0.142 tol=1.83 2024-12-05 23:48:08,024 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=78.2 pTM=0.492 ipTM=0.135 tol=1.62 2024-12-05 23:48:15,507 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78.2 pTM=0.493 ipTM=0.135 tol=1.7 2024-12-05 23:48:22,991 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=78.2 pTM=0.494 ipTM=0.14 tol=1.27 2024-12-05 23:48:30,470 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=78.2 pTM=0.493 ipTM=0.139 tol=2.74 2024-12-05 23:48:37,957 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=78.8 pTM=0.497 ipTM=0.148 tol=1.21 2024-12-05 23:48:45,433 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=78.4 pTM=0.494 ipTM=0.143 tol=3.42 2024-12-05 23:48:52,915 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=78.3 pTM=0.498 ipTM=0.155 tol=1.69 2024-12-05 23:49:00,390 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=78 pTM=0.491 ipTM=0.139 tol=2.67 2024-12-05 23:49:07,875 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=78.4 pTM=0.494 ipTM=0.14 tol=0.799 2024-12-05 23:49:15,347 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78.1 pTM=0.49 ipTM=0.132 tol=1.33 2024-12-05 23:49:22,833 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.5 pTM=0.49 ipTM=0.134 tol=1.55 2024-12-05 23:49:30,313 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.2 pTM=0.49 ipTM=0.135 tol=1.71 2024-12-05 23:49:37,794 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=78.6 pTM=0.491 ipTM=0.139 tol=2.23 2024-12-05 23:49:45,272 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78 pTM=0.494 ipTM=0.144 tol=2.25 2024-12-05 23:49:52,760 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=78.9 pTM=0.496 ipTM=0.144 tol=6.12 2024-12-05 23:50:00,237 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78.2 pTM=0.495 ipTM=0.14 tol=6.69 2024-12-05 23:50:07,726 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=78.6 pTM=0.491 ipTM=0.132 tol=3.81 2024-12-05 23:50:15,209 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=78.3 pTM=0.494 ipTM=0.14 tol=1.24 2024-12-05 23:50:22,685 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78.3 pTM=0.495 ipTM=0.146 tol=1.58 2024-12-05 23:50:30,166 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=78.1 pTM=0.49 ipTM=0.134 tol=3.07 2024-12-05 23:50:37,650 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=78.2 pTM=0.492 ipTM=0.137 tol=1.71 2024-12-05 23:50:45,136 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=78.4 pTM=0.491 ipTM=0.132 tol=0.707 2024-12-05 23:50:52,612 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78.4 pTM=0.494 ipTM=0.139 tol=2.22 2024-12-05 23:51:00,093 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=78.2 pTM=0.488 ipTM=0.128 tol=1.56 2024-12-05 23:51:07,577 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=78.1 pTM=0.489 ipTM=0.133 tol=0.666 2024-12-05 23:51:15,062 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=78.3 pTM=0.489 ipTM=0.133 tol=1.39 2024-12-05 23:51:15,063 alphafold2_multimer_v3_model_4_seed_000 took 231.9s (30 recycles) 2024-12-05 23:51:22,738 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.8 pTM=0.477 ipTM=0.15 2024-12-05 23:51:30,203 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=76.4 pTM=0.49 ipTM=0.141 tol=4.28 2024-12-05 23:51:37,665 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=77.1 pTM=0.496 ipTM=0.154 tol=7.32 2024-12-05 23:51:45,140 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=77.5 pTM=0.504 ipTM=0.169 tol=4.36 2024-12-05 23:51:52,616 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=77.4 pTM=0.502 ipTM=0.17 tol=2.51 2024-12-05 23:52:00,086 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=77.4 pTM=0.497 ipTM=0.157 tol=2.17 2024-12-05 23:52:07,563 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=77.4 pTM=0.503 ipTM=0.171 tol=1.92 2024-12-05 23:52:15,043 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=77.4 pTM=0.495 ipTM=0.154 tol=1.99 2024-12-05 23:52:22,522 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=77.4 pTM=0.5 ipTM=0.163 tol=3.01 2024-12-05 23:52:30,009 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=77.6 pTM=0.499 ipTM=0.161 tol=1.6 2024-12-05 23:52:37,482 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=77.3 pTM=0.5 ipTM=0.168 tol=2.15 2024-12-05 23:52:44,964 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=77.4 pTM=0.494 ipTM=0.153 tol=1.58 2024-12-05 23:52:52,437 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=77.2 pTM=0.502 ipTM=0.17 tol=1.35 2024-12-05 23:52:59,928 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=77.6 pTM=0.494 ipTM=0.153 tol=2.7 2024-12-05 23:53:07,404 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=77.6 pTM=0.504 ipTM=0.171 tol=3.17 2024-12-05 23:53:14,890 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=77.7 pTM=0.494 ipTM=0.153 tol=1.56 2024-12-05 23:53:22,364 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=77 pTM=0.501 ipTM=0.168 tol=1.52 2024-12-05 23:53:29,844 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=77.5 pTM=0.499 ipTM=0.165 tol=4.21 2024-12-05 23:53:37,320 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=77.2 pTM=0.507 ipTM=0.183 tol=2.13 2024-12-05 23:53:44,806 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=77.6 pTM=0.496 ipTM=0.161 tol=1.79 2024-12-05 23:53:52,288 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=77.4 pTM=0.506 ipTM=0.176 tol=5.24 2024-12-05 23:53:59,774 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=77.8 pTM=0.499 ipTM=0.158 tol=5.89 2024-12-05 23:54:07,256 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=77.2 pTM=0.5 ipTM=0.166 tol=2.72 2024-12-05 23:54:14,733 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=77.7 pTM=0.497 ipTM=0.159 tol=0.9 2024-12-05 23:54:22,204 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=77.3 pTM=0.502 ipTM=0.17 tol=4.32 2024-12-05 23:54:29,685 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=77.3 pTM=0.496 ipTM=0.155 tol=1.52 2024-12-05 23:54:37,163 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=77.3 pTM=0.505 ipTM=0.173 tol=1.64 2024-12-05 23:54:44,646 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=77.4 pTM=0.492 ipTM=0.151 tol=2.21 2024-12-05 23:54:52,124 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=77.3 pTM=0.498 ipTM=0.158 tol=1.5 2024-12-05 23:54:59,609 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=77.6 pTM=0.491 ipTM=0.151 tol=1.25 2024-12-05 23:55:07,087 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=77.2 pTM=0.498 ipTM=0.162 tol=3.08 2024-12-05 23:55:07,088 alphafold2_multimer_v3_model_5_seed_000 took 231.8s (30 recycles) 2024-12-05 23:55:07,283 reranking models by 'multimer' metric 2024-12-05 23:55:11,080 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-05 23:55:47,229 Relaxation took 39.9s 2024-12-05 23:55:47,229 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.1 pTM=0.511 ipTM=0.178 2024-12-05 23:56:08,371 Relaxation took 21.1s 2024-12-05 23:56:08,371 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.8 pTM=0.508 ipTM=0.176 2024-12-05 23:56:38,781 Relaxation took 30.4s 2024-12-05 23:56:38,781 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=77.9 pTM=0.498 ipTM=0.176 2024-12-05 23:57:04,952 Relaxation took 26.2s 2024-12-05 23:57:04,952 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=77.2 pTM=0.498 ipTM=0.162 2024-12-05 23:57:39,744 Relaxation took 34.8s 2024-12-05 23:57:39,744 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=78.3 pTM=0.489 ipTM=0.133 2024-12-05 23:57:40,835 Done