2024-12-05 23:39:20,313 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 23:39:20,635 Running on GPU 2024-12-05 23:39:24,578 Found 6 citations for tools or databases 2024-12-05 23:39:24,578 Query 1/1: FBXO2_GDF9 (length 750) 2024-12-05 23:39:24,885 Sleeping for 6s. Reason: PENDING 2024-12-05 23:39:31,133 Sleeping for 8s. Reason: RUNNING 2024-12-05 23:39:39,389 Sleeping for 5s. Reason: RUNNING 2024-12-05 23:39:44,651 Sleeping for 8s. Reason: RUNNING 2024-12-05 23:39:52,911 Sleeping for 8s. Reason: RUNNING 2024-12-05 23:40:01,166 Sleeping for 10s. Reason: RUNNING 2024-12-05 23:40:11,430 Sleeping for 10s. Reason: RUNNING 2024-12-05 23:40:21,695 Sleeping for 5s. Reason: RUNNING 2024-12-05 23:40:26,958 Sleeping for 9s. Reason: RUNNING 2024-12-05 23:40:36,219 Sleeping for 10s. Reason: RUNNING 2024-12-05 23:40:46,476 Sleeping for 10s. Reason: RUNNING 2024-12-05 23:40:56,738 Sleeping for 10s. Reason: RUNNING 2024-12-05 23:41:06,995 Sleeping for 8s. Reason: RUNNING 2024-12-05 23:41:16,567 Sleeping for 10s. Reason: PENDING 2024-12-05 23:41:26,831 Sleeping for 5s. Reason: RUNNING 2024-12-05 23:41:32,085 Sleeping for 6s. Reason: RUNNING 2024-12-05 23:41:38,344 Sleeping for 9s. Reason: RUNNING 2024-12-05 23:41:47,604 Sleeping for 9s. Reason: RUNNING 2024-12-05 23:41:56,866 Sleeping for 8s. Reason: RUNNING 2024-12-05 23:42:05,139 Sleeping for 7s. Reason: RUNNING 2024-12-05 23:42:12,397 Sleeping for 5s. Reason: RUNNING 2024-12-05 23:42:17,655 Sleeping for 9s. Reason: RUNNING 2024-12-05 23:42:28,927 Setting max_seq=508, max_extra_seq=2048 2024-12-05 23:45:06,788 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.7 pTM=0.389 ipTM=0.146 2024-12-05 23:45:18,035 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.5 pTM=0.405 ipTM=0.13 tol=17.8 2024-12-05 23:45:29,315 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.8 pTM=0.426 ipTM=0.17 tol=15.8 2024-12-05 23:45:40,619 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.3 pTM=0.426 ipTM=0.168 tol=5.25 2024-12-05 23:45:51,946 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.7 pTM=0.429 ipTM=0.175 tol=5.09 2024-12-05 23:46:03,272 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.5 pTM=0.43 ipTM=0.187 tol=3.99 2024-12-05 23:46:14,612 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64 pTM=0.448 ipTM=0.214 tol=1.97 2024-12-05 23:46:25,964 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.4 pTM=0.438 ipTM=0.205 tol=3.04 2024-12-05 23:46:37,316 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63.6 pTM=0.438 ipTM=0.206 tol=1.99 2024-12-05 23:46:48,682 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.2 pTM=0.434 ipTM=0.188 tol=3.08 2024-12-05 23:47:00,054 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.8 pTM=0.441 ipTM=0.21 tol=2.73 2024-12-05 23:47:11,435 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.5 pTM=0.432 ipTM=0.185 tol=4.42 2024-12-05 23:47:22,823 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.6 pTM=0.438 ipTM=0.206 tol=5.51 2024-12-05 23:47:34,198 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.8 pTM=0.44 ipTM=0.2 tol=4.11 2024-12-05 23:47:45,585 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.5 pTM=0.454 ipTM=0.231 tol=1.85 2024-12-05 23:47:56,970 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.6 pTM=0.442 ipTM=0.205 tol=3.87 2024-12-05 23:48:08,347 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.1 pTM=0.451 ipTM=0.223 tol=2.32 2024-12-05 23:48:19,739 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.6 pTM=0.435 ipTM=0.195 tol=2.24 2024-12-05 23:48:31,127 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.2 pTM=0.445 ipTM=0.212 tol=3.66 2024-12-05 23:48:42,524 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.8 pTM=0.436 ipTM=0.192 tol=2.07 2024-12-05 23:48:53,922 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.2 pTM=0.436 ipTM=0.193 tol=5.89 2024-12-05 23:49:05,308 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.5 pTM=0.437 ipTM=0.202 tol=6.22 2024-12-05 23:49:16,705 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.4 pTM=0.441 ipTM=0.2 tol=4.39 2024-12-05 23:49:28,095 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.9 pTM=0.443 ipTM=0.209 tol=3.17 2024-12-05 23:49:39,501 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.8 pTM=0.446 ipTM=0.218 tol=2.38 2024-12-05 23:49:50,885 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.1 pTM=0.437 ipTM=0.19 tol=3.71 2024-12-05 23:50:02,267 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.8 pTM=0.445 ipTM=0.218 tol=2.89 2024-12-05 23:50:13,659 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.2 pTM=0.442 ipTM=0.2 tol=3.59 2024-12-05 23:50:25,060 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.1 pTM=0.445 ipTM=0.212 tol=2.55 2024-12-05 23:50:36,470 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.5 pTM=0.433 ipTM=0.187 tol=3.21 2024-12-05 23:50:47,882 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.1 pTM=0.437 ipTM=0.193 tol=5.73 2024-12-05 23:50:47,882 alphafold2_multimer_v3_model_1_seed_000 took 493.5s (30 recycles) 2024-12-05 23:50:59,605 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.5 pTM=0.424 ipTM=0.142 2024-12-05 23:51:10,973 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.5 pTM=0.446 ipTM=0.161 tol=18.6 2024-12-05 23:51:22,369 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.8 pTM=0.429 ipTM=0.137 tol=7.79 2024-12-05 23:51:33,763 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.5 pTM=0.436 ipTM=0.149 tol=2.77 2024-12-05 23:51:45,168 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.1 pTM=0.454 ipTM=0.199 tol=10.9 2024-12-05 23:51:56,576 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.4 pTM=0.434 ipTM=0.162 tol=3.61 2024-12-05 23:52:07,988 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.6 pTM=0.439 ipTM=0.174 tol=3.83 2024-12-05 23:52:19,388 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.7 pTM=0.44 ipTM=0.178 tol=3.47 2024-12-05 23:52:30,801 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.5 pTM=0.432 ipTM=0.16 tol=2.45 2024-12-05 23:52:42,195 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.2 pTM=0.452 ipTM=0.2 tol=2.63 2024-12-05 23:52:53,611 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.7 pTM=0.433 ipTM=0.161 tol=1.9 2024-12-05 23:53:05,017 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.9 pTM=0.446 ipTM=0.189 tol=2.77 2024-12-05 23:53:16,428 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.6 pTM=0.432 ipTM=0.162 tol=2.82 2024-12-05 23:53:27,851 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.8 pTM=0.434 ipTM=0.16 tol=3.4 2024-12-05 23:53:39,257 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.8 pTM=0.441 ipTM=0.177 tol=3.18 2024-12-05 23:53:50,660 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.8 pTM=0.439 ipTM=0.164 tol=3.42 2024-12-05 23:54:02,055 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.2 pTM=0.461 ipTM=0.22 tol=2.79 2024-12-05 23:54:13,457 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.2 pTM=0.44 ipTM=0.165 tol=2.86 2024-12-05 23:54:24,871 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.6 pTM=0.43 ipTM=0.153 tol=2.01 2024-12-05 23:54:36,269 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.3 pTM=0.446 ipTM=0.173 tol=1.97 2024-12-05 23:54:47,666 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.1 pTM=0.447 ipTM=0.186 tol=2.46 2024-12-05 23:54:59,070 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.9 pTM=0.443 ipTM=0.178 tol=1.85 2024-12-05 23:55:10,454 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65 pTM=0.453 ipTM=0.204 tol=2.5 2024-12-05 23:55:21,850 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.2 pTM=0.444 ipTM=0.173 tol=1.84 2024-12-05 23:55:33,243 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.8 pTM=0.448 ipTM=0.192 tol=2.01 2024-12-05 23:55:44,652 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65 pTM=0.44 ipTM=0.167 tol=1.62 2024-12-05 23:55:56,039 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.8 pTM=0.45 ipTM=0.194 tol=1.93 2024-12-05 23:56:07,436 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.1 pTM=0.444 ipTM=0.169 tol=2.42 2024-12-05 23:56:18,834 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.1 pTM=0.465 ipTM=0.224 tol=2.11 2024-12-05 23:56:30,232 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.4 pTM=0.448 ipTM=0.174 tol=2.08 2024-12-05 23:56:41,632 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.8 pTM=0.437 ipTM=0.161 tol=1.7 2024-12-05 23:56:41,633 alphafold2_multimer_v3_model_2_seed_000 took 353.4s (30 recycles) 2024-12-05 23:56:53,414 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.3 pTM=0.418 ipTM=0.212 2024-12-05 23:57:04,857 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.4 pTM=0.402 ipTM=0.125 tol=29.9 2024-12-05 23:57:16,284 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.8 pTM=0.398 ipTM=0.124 tol=10.1 2024-12-05 23:57:27,705 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.3 pTM=0.391 ipTM=0.124 tol=8.46 2024-12-05 23:57:39,160 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.8 pTM=0.395 ipTM=0.118 tol=4.54 2024-12-05 23:57:50,591 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.1 pTM=0.386 ipTM=0.12 tol=5.9 2024-12-05 23:58:02,029 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.3 pTM=0.404 ipTM=0.118 tol=5.77 2024-12-05 23:58:13,455 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.2 pTM=0.391 ipTM=0.119 tol=5.98 2024-12-05 23:58:24,882 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.8 pTM=0.396 ipTM=0.115 tol=3.08 2024-12-05 23:58:36,327 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.7 pTM=0.393 ipTM=0.114 tol=4.82 2024-12-05 23:58:47,766 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.7 pTM=0.394 ipTM=0.122 tol=6.65 2024-12-05 23:58:59,211 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.3 pTM=0.392 ipTM=0.126 tol=2.91 2024-12-05 23:59:10,663 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.5 pTM=0.396 ipTM=0.124 tol=2.24 2024-12-05 23:59:22,094 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.2 pTM=0.393 ipTM=0.128 tol=2.34 2024-12-05 23:59:33,542 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.5 pTM=0.394 ipTM=0.119 tol=4.08 2024-12-05 23:59:44,979 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.1 pTM=0.396 ipTM=0.131 tol=5.41 2024-12-05 23:59:56,439 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.7 pTM=0.4 ipTM=0.133 tol=2.03 2024-12-06 00:00:07,885 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.8 pTM=0.394 ipTM=0.132 tol=2.51 2024-12-06 00:00:19,330 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62 pTM=0.395 ipTM=0.141 tol=2.19 2024-12-06 00:00:30,766 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.3 pTM=0.396 ipTM=0.141 tol=3.89 2024-12-06 00:00:42,217 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.2 pTM=0.398 ipTM=0.142 tol=4.45 2024-12-06 00:00:53,659 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.7 pTM=0.394 ipTM=0.145 tol=4.11 2024-12-06 00:01:05,104 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.7 pTM=0.393 ipTM=0.144 tol=4.54 2024-12-06 00:01:16,540 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.8 pTM=0.391 ipTM=0.132 tol=4.16 2024-12-06 00:01:27,978 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.7 pTM=0.393 ipTM=0.143 tol=2.59 2024-12-06 00:01:39,410 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.4 pTM=0.394 ipTM=0.144 tol=3.95 2024-12-06 00:01:50,856 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.1 pTM=0.401 ipTM=0.144 tol=4.49 2024-12-06 00:02:02,292 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.8 pTM=0.395 ipTM=0.141 tol=2.83 2024-12-06 00:02:13,734 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.5 pTM=0.393 ipTM=0.142 tol=3.91 2024-12-06 00:02:25,177 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.8 pTM=0.391 ipTM=0.13 tol=3.79 2024-12-06 00:02:36,609 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.5 pTM=0.392 ipTM=0.144 tol=2.15 2024-12-06 00:02:36,610 alphafold2_multimer_v3_model_3_seed_000 took 354.6s (30 recycles) 2024-12-06 00:02:48,363 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.8 pTM=0.395 ipTM=0.134 2024-12-06 00:02:59,731 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.1 pTM=0.44 ipTM=0.168 tol=18.8 2024-12-06 00:03:11,131 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.6 pTM=0.432 ipTM=0.137 tol=10 2024-12-06 00:03:22,528 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.1 pTM=0.433 ipTM=0.155 tol=5.65 2024-12-06 00:03:33,947 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.8 pTM=0.431 ipTM=0.139 tol=5.11 2024-12-06 00:03:45,339 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.6 pTM=0.432 ipTM=0.156 tol=5.21 2024-12-06 00:03:56,751 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.8 pTM=0.432 ipTM=0.147 tol=4.98 2024-12-06 00:04:08,139 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.9 pTM=0.436 ipTM=0.163 tol=5.21 2024-12-06 00:04:19,549 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.5 pTM=0.431 ipTM=0.147 tol=4.87 2024-12-06 00:04:30,926 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.8 pTM=0.44 ipTM=0.168 tol=6.41 2024-12-06 00:04:42,335 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65 pTM=0.434 ipTM=0.146 tol=7.38 2024-12-06 00:04:53,718 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.1 pTM=0.44 ipTM=0.17 tol=6.85 2024-12-06 00:05:05,128 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.4 pTM=0.432 ipTM=0.15 tol=6.15 2024-12-06 00:05:16,513 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.8 pTM=0.438 ipTM=0.165 tol=6.73 2024-12-06 00:05:27,930 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.7 pTM=0.434 ipTM=0.149 tol=7.18 2024-12-06 00:05:39,306 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.5 pTM=0.44 ipTM=0.177 tol=6.92 2024-12-06 00:05:50,713 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.8 pTM=0.434 ipTM=0.149 tol=5.91 2024-12-06 00:06:02,102 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.9 pTM=0.434 ipTM=0.158 tol=4.82 2024-12-06 00:06:13,500 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.6 pTM=0.432 ipTM=0.149 tol=5.04 2024-12-06 00:06:24,885 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.1 pTM=0.439 ipTM=0.167 tol=5.89 2024-12-06 00:06:36,291 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.7 pTM=0.433 ipTM=0.149 tol=5.23 2024-12-06 00:06:47,673 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.9 pTM=0.436 ipTM=0.177 tol=6.64 2024-12-06 00:06:59,070 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.4 pTM=0.431 ipTM=0.148 tol=7.54 2024-12-06 00:07:10,467 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.9 pTM=0.433 ipTM=0.155 tol=4.98 2024-12-06 00:07:21,871 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.5 pTM=0.428 ipTM=0.141 tol=5.22 2024-12-06 00:07:33,251 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.8 pTM=0.436 ipTM=0.169 tol=5.28 2024-12-06 00:07:44,655 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.1 pTM=0.43 ipTM=0.148 tol=4.91 2024-12-06 00:07:56,035 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.5 pTM=0.435 ipTM=0.163 tol=5.19 2024-12-06 00:08:07,446 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.4 pTM=0.43 ipTM=0.147 tol=4.6 2024-12-06 00:08:18,825 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.6 pTM=0.436 ipTM=0.171 tol=5.82 2024-12-06 00:08:30,229 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.1 pTM=0.429 ipTM=0.148 tol=5.11 2024-12-06 00:08:30,230 alphafold2_multimer_v3_model_4_seed_000 took 353.3s (30 recycles) 2024-12-06 00:08:41,991 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.9 pTM=0.395 ipTM=0.137 2024-12-06 00:08:53,397 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.2 pTM=0.41 ipTM=0.119 tol=11.9 2024-12-06 00:09:04,828 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.7 pTM=0.403 ipTM=0.129 tol=22.1 2024-12-06 00:09:16,257 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.5 pTM=0.408 ipTM=0.136 tol=3.89 2024-12-06 00:09:27,693 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.4 pTM=0.406 ipTM=0.135 tol=5.43 2024-12-06 00:09:39,137 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.5 pTM=0.417 ipTM=0.13 tol=6.77 2024-12-06 00:09:50,575 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.6 pTM=0.414 ipTM=0.13 tol=6.19 2024-12-06 00:10:02,013 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.2 pTM=0.407 ipTM=0.132 tol=5.51 2024-12-06 00:10:13,459 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.5 pTM=0.412 ipTM=0.13 tol=7.41 2024-12-06 00:10:24,895 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.2 pTM=0.411 ipTM=0.129 tol=4.89 2024-12-06 00:10:36,332 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.8 pTM=0.414 ipTM=0.131 tol=1.9 2024-12-06 00:10:47,756 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.6 pTM=0.413 ipTM=0.131 tol=4.84 2024-12-06 00:10:59,193 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.4 pTM=0.408 ipTM=0.129 tol=3.56 2024-12-06 00:11:10,625 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.5 pTM=0.414 ipTM=0.13 tol=4.65 2024-12-06 00:11:22,055 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.6 pTM=0.411 ipTM=0.13 tol=4.55 2024-12-06 00:11:33,485 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.1 pTM=0.408 ipTM=0.13 tol=2.38 2024-12-06 00:11:44,912 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.8 pTM=0.415 ipTM=0.128 tol=3.2 2024-12-06 00:11:56,345 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.3 pTM=0.407 ipTM=0.131 tol=2.85 2024-12-06 00:12:07,768 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.8 pTM=0.413 ipTM=0.13 tol=2.44 2024-12-06 00:12:19,197 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.6 pTM=0.41 ipTM=0.131 tol=2.22 2024-12-06 00:12:30,634 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63 pTM=0.412 ipTM=0.129 tol=3.07 2024-12-06 00:12:42,068 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.4 pTM=0.408 ipTM=0.129 tol=3.01 2024-12-06 00:12:53,503 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.2 pTM=0.406 ipTM=0.13 tol=2.25 2024-12-06 00:13:04,935 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.5 pTM=0.409 ipTM=0.129 tol=1.46 2024-12-06 00:13:16,370 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.5 pTM=0.409 ipTM=0.13 tol=3.36 2024-12-06 00:13:27,802 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.9 pTM=0.412 ipTM=0.127 tol=2.88 2024-12-06 00:13:39,229 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.3 pTM=0.408 ipTM=0.129 tol=4.35 2024-12-06 00:13:50,657 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.6 pTM=0.416 ipTM=0.132 tol=5.45 2024-12-06 00:14:02,078 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.1 pTM=0.413 ipTM=0.135 tol=4.88 2024-12-06 00:14:13,502 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62 pTM=0.412 ipTM=0.133 tol=2.69 2024-12-06 00:14:24,932 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62 pTM=0.411 ipTM=0.133 tol=3.99 2024-12-06 00:14:24,933 alphafold2_multimer_v3_model_5_seed_000 took 354.3s (30 recycles) 2024-12-06 00:14:25,296 reranking models by 'multimer' metric 2024-12-06 00:14:29,276 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 00:15:54,845 Relaxation took 89.5s 2024-12-06 00:15:54,845 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.1 pTM=0.437 ipTM=0.193 2024-12-06 00:16:53,680 Relaxation took 58.8s 2024-12-06 00:16:53,681 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.8 pTM=0.437 ipTM=0.161 2024-12-06 00:17:38,505 Relaxation took 44.8s 2024-12-06 00:17:38,505 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.1 pTM=0.429 ipTM=0.148 2024-12-06 00:18:58,832 Relaxation took 80.3s 2024-12-06 00:18:58,832 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.5 pTM=0.392 ipTM=0.144 2024-12-06 00:19:49,479 Relaxation took 50.6s 2024-12-06 00:19:49,479 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62 pTM=0.411 ipTM=0.133 2024-12-06 00:19:50,941 Done