2024-12-06 00:20:28,581 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 00:20:28,904 Running on GPU 2024-12-06 00:20:32,793 Found 6 citations for tools or databases 2024-12-06 00:20:32,793 Query 1/1: FBXO2_LRIG2 (length 1361) 2024-12-06 00:20:33,085 Sleeping for 7s. Reason: PENDING 2024-12-06 00:20:40,340 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:20:46,602 Sleeping for 9s. Reason: RUNNING 2024-12-06 00:20:55,857 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:21:04,108 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:21:11,365 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:21:17,627 Sleeping for 9s. Reason: RUNNING 2024-12-06 00:21:27,060 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:21:32,314 Sleeping for 9s. Reason: RUNNING 2024-12-06 00:21:41,575 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:21:49,834 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:21:55,099 Sleeping for 9s. Reason: RUNNING 2024-12-06 00:22:04,368 Sleeping for 9s. Reason: RUNNING 2024-12-06 00:22:13,629 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:22:19,885 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:22:26,139 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:22:32,394 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:22:37,654 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:22:42,913 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:22:49,170 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:22:59,440 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:23:07,695 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:23:12,948 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:23:18,204 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:23:24,459 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:23:34,730 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:23:42,001 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:23:50,257 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:24:00,515 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:24:10,777 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:24:19,039 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:24:25,301 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:24:33,556 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:24:39,809 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:24:50,066 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:24:56,323 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:25:03,595 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:25:11,852 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:25:19,109 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:25:26,368 Sleeping for 9s. Reason: RUNNING 2024-12-06 00:25:35,643 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:25:40,903 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:25:51,163 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:25:58,433 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:26:05,697 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:26:12,956 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:26:18,218 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:26:25,478 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:26:35,742 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:26:41,998 Sleeping for 9s. Reason: RUNNING 2024-12-06 00:26:51,259 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:26:58,512 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:27:08,777 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:27:15,031 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:27:22,284 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:27:28,548 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:27:33,800 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:27:45,717 Sleeping for 10s. Reason: PENDING 2024-12-06 00:27:55,982 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:28:02,247 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:28:12,507 Sleeping for 9s. Reason: RUNNING 2024-12-06 00:28:21,762 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:28:32,034 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:28:42,303 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:28:48,561 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:28:55,817 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:29:02,072 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:29:10,330 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:29:18,584 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:29:26,848 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:29:33,106 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:29:38,374 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:29:45,633 Sleeping for 8s. Reason: RUNNING 2024-12-06 00:29:53,893 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:30:01,148 Sleeping for 9s. Reason: RUNNING 2024-12-06 00:30:10,407 Sleeping for 9s. Reason: RUNNING 2024-12-06 00:30:19,670 Sleeping for 6s. Reason: RUNNING 2024-12-06 00:30:25,926 Sleeping for 10s. Reason: RUNNING 2024-12-06 00:30:36,181 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:30:41,437 Sleeping for 7s. Reason: RUNNING 2024-12-06 00:30:48,694 Sleeping for 5s. Reason: RUNNING 2024-12-06 00:30:57,885 Setting max_seq=508, max_extra_seq=2048 2024-12-06 00:34:34,670 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.9 pTM=0.516 ipTM=0.338 2024-12-06 00:35:24,760 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.1 pTM=0.504 ipTM=0.265 tol=10.5 2024-12-06 00:36:15,059 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.2 pTM=0.494 ipTM=0.212 tol=8.48 2024-12-06 00:37:05,475 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.1 pTM=0.487 ipTM=0.208 tol=7.46 2024-12-06 00:37:55,957 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.4 pTM=0.488 ipTM=0.2 tol=5.49 2024-12-06 00:38:46,437 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.4 pTM=0.487 ipTM=0.253 tol=6.57 2024-12-06 00:39:36,986 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.7 pTM=0.484 ipTM=0.243 tol=6.41 2024-12-06 00:40:27,626 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.4 pTM=0.484 ipTM=0.223 tol=2.91 2024-12-06 00:41:18,295 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.3 pTM=0.479 ipTM=0.201 tol=2.49 2024-12-06 00:42:08,989 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.1 pTM=0.478 ipTM=0.183 tol=2.93 2024-12-06 00:42:59,691 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.9 pTM=0.477 ipTM=0.167 tol=5.93 2024-12-06 00:43:50,392 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.8 pTM=0.475 ipTM=0.161 tol=13.9 2024-12-06 00:44:41,008 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.8 pTM=0.48 ipTM=0.164 tol=9.73 2024-12-06 00:45:31,638 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=68.9 pTM=0.479 ipTM=0.157 tol=15 2024-12-06 00:46:22,206 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.1 pTM=0.48 ipTM=0.167 tol=6.84 2024-12-06 00:47:12,790 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.1 pTM=0.483 ipTM=0.167 tol=5.45 2024-12-06 00:48:03,408 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69 pTM=0.482 ipTM=0.162 tol=3.67 2024-12-06 00:48:53,986 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69 pTM=0.484 ipTM=0.167 tol=3.22 2024-12-06 00:49:44,576 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.2 pTM=0.484 ipTM=0.167 tol=4.14 2024-12-06 00:50:35,207 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.9 pTM=0.481 ipTM=0.161 tol=3.57 2024-12-06 00:51:25,855 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.1 pTM=0.483 ipTM=0.162 tol=6.76 2024-12-06 00:52:16,463 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.4 pTM=0.487 ipTM=0.178 tol=8.01 2024-12-06 00:53:07,129 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.1 pTM=0.481 ipTM=0.162 tol=11.8 2024-12-06 00:53:57,801 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69 pTM=0.48 ipTM=0.161 tol=11 2024-12-06 00:54:48,385 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.6 pTM=0.501 ipTM=0.25 tol=6.18 2024-12-06 00:55:39,071 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.2 pTM=0.484 ipTM=0.168 tol=15.3 2024-12-06 00:56:29,734 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.9 pTM=0.483 ipTM=0.171 tol=9.59 2024-12-06 00:57:20,370 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.8 pTM=0.48 ipTM=0.175 tol=7.94 2024-12-06 00:58:10,995 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.8 pTM=0.48 ipTM=0.175 tol=6.3 2024-12-06 00:59:01,609 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.8 pTM=0.48 ipTM=0.176 tol=5.89 2024-12-06 00:59:52,226 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.8 pTM=0.485 ipTM=0.178 tol=5.27 2024-12-06 00:59:52,227 alphafold2_multimer_v3_model_1_seed_000 took 1730.7s (30 recycles) 2024-12-06 01:00:43,904 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.6 pTM=0.511 ipTM=0.203 2024-12-06 01:01:34,464 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.2 pTM=0.59 ipTM=0.499 tol=10.8 2024-12-06 01:02:25,100 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.7 pTM=0.538 ipTM=0.295 tol=7.57 2024-12-06 01:03:15,839 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.8 pTM=0.505 ipTM=0.178 tol=10.2 2024-12-06 01:04:06,524 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.8 pTM=0.505 ipTM=0.168 tol=4.83 2024-12-06 01:04:57,210 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.7 pTM=0.506 ipTM=0.167 tol=3.05 2024-12-06 01:05:47,932 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.6 pTM=0.499 ipTM=0.166 tol=14.4 2024-12-06 01:06:38,644 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.9 pTM=0.501 ipTM=0.173 tol=4.4 2024-12-06 01:07:29,354 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70 pTM=0.5 ipTM=0.177 tol=4.39 2024-12-06 01:08:20,088 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.9 pTM=0.503 ipTM=0.184 tol=3.75 2024-12-06 01:09:10,808 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.7 pTM=0.502 ipTM=0.174 tol=5.14 2024-12-06 01:10:01,490 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.6 pTM=0.5 ipTM=0.177 tol=3.35 2024-12-06 01:10:52,151 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.7 pTM=0.505 ipTM=0.19 tol=3.47 2024-12-06 01:11:42,836 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.8 pTM=0.505 ipTM=0.187 tol=4.01 2024-12-06 01:12:33,546 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.6 pTM=0.504 ipTM=0.179 tol=5.45 2024-12-06 01:13:24,277 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.7 pTM=0.506 ipTM=0.182 tol=3.49 2024-12-06 01:14:14,989 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.9 pTM=0.511 ipTM=0.196 tol=4.14 2024-12-06 01:15:05,710 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.7 pTM=0.508 ipTM=0.191 tol=3.81 2024-12-06 01:15:56,451 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.8 pTM=0.508 ipTM=0.184 tol=3.62 2024-12-06 01:16:47,175 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.6 pTM=0.506 ipTM=0.18 tol=3.63 2024-12-06 01:17:37,853 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.8 pTM=0.509 ipTM=0.191 tol=3.85 2024-12-06 01:18:28,510 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.8 pTM=0.504 ipTM=0.178 tol=3.94 2024-12-06 01:19:19,194 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.8 pTM=0.499 ipTM=0.166 tol=4.41 2024-12-06 01:20:09,858 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.8 pTM=0.5 ipTM=0.162 tol=4.1 2024-12-06 01:21:00,504 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.8 pTM=0.501 ipTM=0.172 tol=5.31 2024-12-06 01:21:51,159 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=70 pTM=0.497 ipTM=0.159 tol=7.72 2024-12-06 01:22:41,820 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.6 pTM=0.503 ipTM=0.172 tol=13.9 2024-12-06 01:23:32,494 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.6 pTM=0.501 ipTM=0.162 tol=23.7 2024-12-06 01:24:23,224 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.8 pTM=0.501 ipTM=0.171 tol=25.7 2024-12-06 01:25:13,943 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.8 pTM=0.499 ipTM=0.168 tol=8.47 2024-12-06 01:26:04,600 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.9 pTM=0.499 ipTM=0.182 tol=9.71 2024-12-06 01:26:04,601 alphafold2_multimer_v3_model_2_seed_000 took 1571.3s (30 recycles) 2024-12-06 01:26:56,242 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.6 pTM=0.512 ipTM=0.279 2024-12-06 01:27:46,761 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.7 pTM=0.518 ipTM=0.194 tol=17.3 2024-12-06 01:28:37,305 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.2 pTM=0.518 ipTM=0.188 tol=5.21 2024-12-06 01:29:27,919 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.2 pTM=0.521 ipTM=0.216 tol=18.6 2024-12-06 01:30:18,649 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.4 pTM=0.508 ipTM=0.163 tol=8.05 2024-12-06 01:31:09,374 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.2 pTM=0.513 ipTM=0.183 tol=4.95 2024-12-06 01:32:00,117 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.2 pTM=0.503 ipTM=0.158 tol=11.1 2024-12-06 01:32:50,834 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.2 pTM=0.515 ipTM=0.183 tol=11.2 2024-12-06 01:33:41,560 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.2 pTM=0.508 ipTM=0.16 tol=6.52 2024-12-06 01:34:32,230 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.2 pTM=0.516 ipTM=0.186 tol=6.33 2024-12-06 01:35:22,944 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.3 pTM=0.509 ipTM=0.162 tol=4.21 2024-12-06 01:36:13,610 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.2 pTM=0.517 ipTM=0.193 tol=5.04 2024-12-06 01:37:04,305 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.2 pTM=0.508 ipTM=0.161 tol=3.95 2024-12-06 01:37:54,976 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.5 pTM=0.513 ipTM=0.18 tol=18 2024-12-06 01:38:45,690 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.2 pTM=0.516 ipTM=0.189 tol=17.7 2024-12-06 01:39:36,394 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.2 pTM=0.51 ipTM=0.172 tol=6.27 2024-12-06 01:40:27,064 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.4 pTM=0.519 ipTM=0.195 tol=4.89 2024-12-06 01:41:17,777 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.3 pTM=0.51 ipTM=0.164 tol=4.98 2024-12-06 01:42:08,453 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.5 pTM=0.519 ipTM=0.195 tol=4.54 2024-12-06 01:42:59,175 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.2 pTM=0.507 ipTM=0.161 tol=5.35 2024-12-06 01:43:49,894 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.2 pTM=0.513 ipTM=0.182 tol=4.43 2024-12-06 01:44:40,585 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68.2 pTM=0.51 ipTM=0.164 tol=3.95 2024-12-06 01:45:31,231 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.1 pTM=0.51 ipTM=0.178 tol=4.71 2024-12-06 01:46:21,866 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68 pTM=0.509 ipTM=0.179 tol=19.5 2024-12-06 01:47:12,452 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68.6 pTM=0.514 ipTM=0.183 tol=8.34 2024-12-06 01:48:03,175 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.8 pTM=0.511 ipTM=0.179 tol=20.1 2024-12-06 01:48:53,840 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68 pTM=0.512 ipTM=0.18 tol=21.7 2024-12-06 01:49:44,436 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.9 pTM=0.516 ipTM=0.186 tol=10.7 2024-12-06 01:50:35,121 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68 pTM=0.518 ipTM=0.195 tol=20.4 2024-12-06 01:51:25,856 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68.1 pTM=0.504 ipTM=0.154 tol=13 2024-12-06 01:52:16,471 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=68.6 pTM=0.51 ipTM=0.173 tol=10 2024-12-06 01:52:16,472 alphafold2_multimer_v3_model_3_seed_000 took 1570.8s (30 recycles) 2024-12-06 01:53:08,038 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.6 pTM=0.546 ipTM=0.375 2024-12-06 01:53:58,603 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.2 pTM=0.517 ipTM=0.201 tol=15.2 2024-12-06 01:54:49,167 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.3 pTM=0.52 ipTM=0.199 tol=8.16 2024-12-06 01:55:39,736 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.6 pTM=0.518 ipTM=0.202 tol=8.13 2024-12-06 01:56:30,277 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.2 pTM=0.527 ipTM=0.222 tol=7.45 2024-12-06 01:57:20,802 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.9 pTM=0.524 ipTM=0.218 tol=5.5 2024-12-06 01:58:11,334 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.8 pTM=0.524 ipTM=0.222 tol=5.45 2024-12-06 01:59:01,899 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.8 pTM=0.523 ipTM=0.223 tol=5.55 2024-12-06 01:59:52,430 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.6 pTM=0.526 ipTM=0.23 tol=5.03 2024-12-06 02:00:42,963 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.9 pTM=0.525 ipTM=0.221 tol=3.34 2024-12-06 02:01:33,480 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.8 pTM=0.525 ipTM=0.219 tol=6.39 2024-12-06 02:02:23,980 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.9 pTM=0.523 ipTM=0.222 tol=7.56 2024-12-06 02:03:14,503 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.8 pTM=0.521 ipTM=0.213 tol=6.89 2024-12-06 02:04:05,065 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67.7 pTM=0.521 ipTM=0.217 tol=6.27 2024-12-06 02:04:55,650 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.6 pTM=0.521 ipTM=0.208 tol=5.99 2024-12-06 02:05:46,214 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.8 pTM=0.526 ipTM=0.227 tol=10.3 2024-12-06 02:06:36,795 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.7 pTM=0.527 ipTM=0.226 tol=6.76 2024-12-06 02:07:27,353 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67.8 pTM=0.523 ipTM=0.216 tol=6.02 2024-12-06 02:08:17,877 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.3 pTM=0.527 ipTM=0.229 tol=6.43 2024-12-06 02:09:08,386 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.4 pTM=0.528 ipTM=0.234 tol=8.12 2024-12-06 02:09:58,973 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.7 pTM=0.526 ipTM=0.23 tol=7.71 2024-12-06 02:10:49,571 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.6 pTM=0.527 ipTM=0.233 tol=4.14 2024-12-06 02:11:40,157 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.9 pTM=0.528 ipTM=0.237 tol=5.98 2024-12-06 02:12:30,760 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.5 pTM=0.525 ipTM=0.227 tol=3.07 2024-12-06 02:13:21,389 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67.8 pTM=0.526 ipTM=0.231 tol=2.82 2024-12-06 02:14:12,051 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.5 pTM=0.527 ipTM=0.227 tol=3.04 2024-12-06 02:15:02,696 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.7 pTM=0.525 ipTM=0.226 tol=4.86 2024-12-06 02:15:53,386 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.6 pTM=0.525 ipTM=0.224 tol=3.11 2024-12-06 02:16:44,087 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.1 pTM=0.524 ipTM=0.223 tol=8.37 2024-12-06 02:17:34,781 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.4 pTM=0.521 ipTM=0.213 tol=4.63 2024-12-06 02:18:25,486 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.1 pTM=0.524 ipTM=0.223 tol=9.68 2024-12-06 02:18:25,487 alphafold2_multimer_v3_model_4_seed_000 took 1567.9s (30 recycles) 2024-12-06 02:19:17,395 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.1 pTM=0.502 ipTM=0.166 2024-12-06 02:20:08,015 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.6 pTM=0.526 ipTM=0.219 tol=10.7 2024-12-06 02:20:58,660 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.8 pTM=0.521 ipTM=0.182 tol=6.7 2024-12-06 02:21:49,334 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.4 pTM=0.514 ipTM=0.173 tol=5.98 2024-12-06 02:22:39,964 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.6 pTM=0.506 ipTM=0.154 tol=6.04 2024-12-06 02:23:30,487 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.6 pTM=0.512 ipTM=0.166 tol=4.75 2024-12-06 02:24:21,045 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.8 pTM=0.518 ipTM=0.179 tol=18 2024-12-06 02:25:11,597 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.6 pTM=0.514 ipTM=0.164 tol=7.14 2024-12-06 02:26:02,098 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.9 pTM=0.52 ipTM=0.192 tol=19 2024-12-06 02:26:52,647 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.1 pTM=0.514 ipTM=0.157 tol=11.7 2024-12-06 02:27:43,239 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.4 pTM=0.511 ipTM=0.157 tol=6.38 2024-12-06 02:28:33,792 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.8 pTM=0.514 ipTM=0.168 tol=8.92 2024-12-06 02:29:24,394 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.3 pTM=0.506 ipTM=0.151 tol=8.49 2024-12-06 02:30:14,943 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.8 pTM=0.511 ipTM=0.163 tol=7.2 2024-12-06 02:31:05,575 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.4 pTM=0.52 ipTM=0.186 tol=18 2024-12-06 02:31:56,218 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.4 pTM=0.515 ipTM=0.171 tol=7.06 2024-12-06 02:32:46,913 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.4 pTM=0.512 ipTM=0.166 tol=5.53 2024-12-06 02:33:37,603 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.2 pTM=0.51 ipTM=0.165 tol=16 2024-12-06 02:34:28,242 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.7 pTM=0.513 ipTM=0.161 tol=7.52 2024-12-06 02:35:18,906 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.2 pTM=0.506 ipTM=0.157 tol=6.18 2024-12-06 02:36:09,477 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.8 pTM=0.523 ipTM=0.209 tol=5.22 2024-12-06 02:37:00,098 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.1 pTM=0.516 ipTM=0.162 tol=6.89 2024-12-06 02:37:50,817 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.5 pTM=0.512 ipTM=0.164 tol=5.44 2024-12-06 02:38:41,458 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.6 pTM=0.511 ipTM=0.163 tol=2.72 2024-12-06 02:39:32,109 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.6 pTM=0.51 ipTM=0.154 tol=8.02 2024-12-06 02:40:22,818 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.3 pTM=0.506 ipTM=0.153 tol=8.35 2024-12-06 02:41:13,500 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.4 pTM=0.511 ipTM=0.166 tol=8.33 2024-12-06 02:42:04,169 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.8 pTM=0.512 ipTM=0.16 tol=4.96 2024-12-06 02:42:54,881 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.4 pTM=0.511 ipTM=0.168 tol=4.58 2024-12-06 02:43:45,552 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.8 pTM=0.513 ipTM=0.165 tol=4.76 2024-12-06 02:44:36,298 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.4 pTM=0.505 ipTM=0.151 tol=9.08 2024-12-06 02:44:36,300 alphafold2_multimer_v3_model_5_seed_000 took 1569.6s (30 recycles) 2024-12-06 02:44:37,398 reranking models by 'multimer' metric 2024-12-06 02:44:38,667 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 02:47:37,586 Relaxation took 180.2s 2024-12-06 02:47:37,586 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.1 pTM=0.524 ipTM=0.223 2024-12-06 02:49:39,438 Relaxation took 121.8s 2024-12-06 02:49:39,438 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.9 pTM=0.499 ipTM=0.182 2024-12-06 02:52:00,447 Relaxation took 141.0s 2024-12-06 02:52:00,448 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=68.6 pTM=0.51 ipTM=0.173 2024-12-06 02:53:58,734 Relaxation took 118.3s 2024-12-06 02:53:58,735 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.8 pTM=0.485 ipTM=0.178 2024-12-06 02:56:13,460 Relaxation took 134.7s 2024-12-06 02:56:13,460 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.4 pTM=0.505 ipTM=0.151 2024-12-06 02:56:16,276 Done