2024-12-06 03:32:27,968 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 03:32:28,253 Running on GPU 2024-12-06 03:32:32,486 Found 6 citations for tools or databases 2024-12-06 03:32:32,487 Query 1/1: FBXO3_FAM26D (length 785) 2024-12-06 03:32:32,786 Sleeping for 10s. Reason: PENDING 2024-12-06 03:32:43,049 Sleeping for 7s. Reason: RUNNING 2024-12-06 03:32:50,306 Sleeping for 5s. Reason: RUNNING 2024-12-06 03:32:55,566 Sleeping for 9s. Reason: RUNNING 2024-12-06 03:33:04,828 Sleeping for 5s. Reason: RUNNING 2024-12-06 03:33:10,084 Sleeping for 8s. Reason: RUNNING 2024-12-06 03:33:18,342 Sleeping for 10s. Reason: RUNNING 2024-12-06 03:33:28,600 Sleeping for 7s. Reason: RUNNING 2024-12-06 03:33:37,921 Sleeping for 6s. Reason: PENDING 2024-12-06 03:33:44,172 Sleeping for 10s. Reason: RUNNING 2024-12-06 03:33:54,430 Sleeping for 5s. Reason: RUNNING 2024-12-06 03:33:59,685 Sleeping for 6s. Reason: RUNNING 2024-12-06 03:34:05,954 Sleeping for 5s. Reason: RUNNING 2024-12-06 03:34:11,210 Sleeping for 6s. Reason: RUNNING 2024-12-06 03:34:17,465 Sleeping for 7s. Reason: RUNNING 2024-12-06 03:34:27,356 Setting max_seq=508, max_extra_seq=2048 2024-12-06 03:37:25,184 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.8 pTM=0.542 ipTM=0.159 2024-12-06 03:37:37,482 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=73.1 pTM=0.525 ipTM=0.143 tol=2.43 2024-12-06 03:37:49,849 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.9 pTM=0.5 ipTM=0.112 tol=4.96 2024-12-06 03:38:02,253 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.4 pTM=0.504 ipTM=0.135 tol=15.7 2024-12-06 03:38:14,661 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.4 pTM=0.517 ipTM=0.154 tol=10.1 2024-12-06 03:38:27,081 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.2 pTM=0.52 ipTM=0.156 tol=2.55 2024-12-06 03:38:39,513 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.4 pTM=0.525 ipTM=0.156 tol=2.39 2024-12-06 03:38:51,964 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.2 pTM=0.525 ipTM=0.157 tol=1.66 2024-12-06 03:39:04,422 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.1 pTM=0.523 ipTM=0.157 tol=1.16 2024-12-06 03:39:16,895 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.3 pTM=0.525 ipTM=0.156 tol=1.12 2024-12-06 03:39:29,369 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.4 pTM=0.528 ipTM=0.152 tol=1.18 2024-12-06 03:39:41,846 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.4 pTM=0.527 ipTM=0.164 tol=1.07 2024-12-06 03:39:54,336 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.4 pTM=0.528 ipTM=0.165 tol=0.604 2024-12-06 03:40:06,818 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.3 pTM=0.527 ipTM=0.147 tol=0.973 2024-12-06 03:40:19,311 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.2 pTM=0.526 ipTM=0.156 tol=0.734 2024-12-06 03:40:31,805 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.4 pTM=0.527 ipTM=0.171 tol=0.698 2024-12-06 03:40:44,307 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.4 pTM=0.526 ipTM=0.176 tol=0.979 2024-12-06 03:40:56,807 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.8 pTM=0.529 ipTM=0.166 tol=1.09 2024-12-06 03:41:09,309 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.4 pTM=0.527 ipTM=0.165 tol=1.98 2024-12-06 03:41:21,812 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.6 pTM=0.525 ipTM=0.159 tol=1.26 2024-12-06 03:41:34,314 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.2 pTM=0.525 ipTM=0.159 tol=1.11 2024-12-06 03:41:46,826 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.3 pTM=0.526 ipTM=0.16 tol=0.594 2024-12-06 03:41:59,336 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.6 pTM=0.529 ipTM=0.173 tol=0.621 2024-12-06 03:42:11,842 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.5 pTM=0.525 ipTM=0.162 tol=1.21 2024-12-06 03:42:24,347 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.5 pTM=0.525 ipTM=0.155 tol=0.924 2024-12-06 03:42:36,853 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.6 pTM=0.525 ipTM=0.181 tol=0.821 2024-12-06 03:42:49,366 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.2 pTM=0.526 ipTM=0.179 tol=0.565 2024-12-06 03:43:01,883 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.5 pTM=0.527 ipTM=0.168 tol=0.801 2024-12-06 03:43:14,394 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72 pTM=0.525 ipTM=0.157 tol=0.625 2024-12-06 03:43:26,894 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.5 pTM=0.527 ipTM=0.154 tol=0.694 2024-12-06 03:43:39,399 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.4 pTM=0.526 ipTM=0.163 tol=0.788 2024-12-06 03:43:39,400 alphafold2_multimer_v3_model_1_seed_000 took 546.6s (30 recycles) 2024-12-06 03:43:52,282 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.1 pTM=0.538 ipTM=0.161 2024-12-06 03:44:04,806 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.1 pTM=0.537 ipTM=0.158 tol=4.91 2024-12-06 03:44:17,325 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.3 pTM=0.522 ipTM=0.125 tol=3.74 2024-12-06 03:44:29,894 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.8 pTM=0.513 ipTM=0.107 tol=14.4 2024-12-06 03:44:42,452 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.3 pTM=0.527 ipTM=0.131 tol=13.2 2024-12-06 03:44:54,997 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.2 pTM=0.528 ipTM=0.135 tol=2.71 2024-12-06 03:45:07,545 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.3 pTM=0.527 ipTM=0.134 tol=3.11 2024-12-06 03:45:20,098 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.2 pTM=0.529 ipTM=0.133 tol=1.93 2024-12-06 03:45:32,634 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.1 pTM=0.528 ipTM=0.133 tol=2.01 2024-12-06 03:45:45,176 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.3 pTM=0.528 ipTM=0.134 tol=2.35 2024-12-06 03:45:57,728 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.4 pTM=0.533 ipTM=0.167 tol=1.29 2024-12-06 03:46:10,279 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.6 pTM=0.532 ipTM=0.171 tol=1.61 2024-12-06 03:46:22,831 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.3 pTM=0.53 ipTM=0.16 tol=1.1 2024-12-06 03:46:35,381 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.4 pTM=0.53 ipTM=0.144 tol=0.772 2024-12-06 03:46:47,931 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74 pTM=0.527 ipTM=0.139 tol=2.21 2024-12-06 03:47:00,493 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.2 pTM=0.527 ipTM=0.146 tol=0.74 2024-12-06 03:47:13,051 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.2 pTM=0.527 ipTM=0.16 tol=1.42 2024-12-06 03:47:25,607 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.8 pTM=0.531 ipTM=0.17 tol=0.89 2024-12-06 03:47:38,154 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.2 pTM=0.53 ipTM=0.181 tol=1.48 2024-12-06 03:47:50,704 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.1 pTM=0.528 ipTM=0.171 tol=0.609 2024-12-06 03:48:03,250 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.1 pTM=0.528 ipTM=0.158 tol=0.998 2024-12-06 03:48:15,800 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.1 pTM=0.529 ipTM=0.144 tol=1.16 2024-12-06 03:48:28,342 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.1 pTM=0.529 ipTM=0.15 tol=0.848 2024-12-06 03:48:40,899 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.1 pTM=0.528 ipTM=0.155 tol=1.16 2024-12-06 03:48:53,455 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.2 pTM=0.528 ipTM=0.144 tol=1.09 2024-12-06 03:49:06,007 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.2 pTM=0.526 ipTM=0.136 tol=0.829 2024-12-06 03:49:18,561 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.1 pTM=0.529 ipTM=0.14 tol=1.11 2024-12-06 03:49:31,113 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.2 pTM=0.53 ipTM=0.141 tol=1.44 2024-12-06 03:49:43,649 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.7 pTM=0.525 ipTM=0.143 tol=0.985 2024-12-06 03:49:56,207 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.1 pTM=0.527 ipTM=0.138 tol=0.848 2024-12-06 03:50:08,762 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.1 pTM=0.526 ipTM=0.135 tol=1.47 2024-12-06 03:50:08,763 alphafold2_multimer_v3_model_2_seed_000 took 389.0s (30 recycles) 2024-12-06 03:50:21,639 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=71.4 pTM=0.531 ipTM=0.172 2024-12-06 03:50:34,120 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.6 pTM=0.522 ipTM=0.152 tol=7.36 2024-12-06 03:50:46,621 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.5 pTM=0.507 ipTM=0.131 tol=3.22 2024-12-06 03:50:59,166 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.8 pTM=0.499 ipTM=0.107 tol=3.94 2024-12-06 03:51:11,695 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70 pTM=0.509 ipTM=0.13 tol=23 2024-12-06 03:51:24,218 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.1 pTM=0.511 ipTM=0.141 tol=3.11 2024-12-06 03:51:36,750 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.3 pTM=0.514 ipTM=0.14 tol=1.45 2024-12-06 03:51:49,273 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70 pTM=0.514 ipTM=0.141 tol=1.18 2024-12-06 03:52:01,800 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.2 pTM=0.516 ipTM=0.141 tol=0.823 2024-12-06 03:52:14,328 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.2 pTM=0.519 ipTM=0.145 tol=0.688 2024-12-06 03:52:26,857 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.9 pTM=0.519 ipTM=0.143 tol=1.46 2024-12-06 03:52:39,384 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.4 pTM=0.521 ipTM=0.144 tol=1.67 2024-12-06 03:52:51,913 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.4 pTM=0.519 ipTM=0.14 tol=0.781 2024-12-06 03:53:04,436 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.3 pTM=0.52 ipTM=0.142 tol=0.916 2024-12-06 03:53:16,960 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.1 pTM=0.517 ipTM=0.137 tol=2.21 2024-12-06 03:53:29,485 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.3 pTM=0.519 ipTM=0.139 tol=2.22 2024-12-06 03:53:42,024 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.8 pTM=0.522 ipTM=0.14 tol=2.28 2024-12-06 03:53:54,563 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.9 pTM=0.525 ipTM=0.14 tol=1.51 2024-12-06 03:54:07,085 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.4 pTM=0.522 ipTM=0.143 tol=1.43 2024-12-06 03:54:19,611 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.4 pTM=0.521 ipTM=0.14 tol=1.3 2024-12-06 03:54:32,138 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.6 pTM=0.522 ipTM=0.142 tol=3.99 2024-12-06 03:54:44,659 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.6 pTM=0.523 ipTM=0.143 tol=0.873 2024-12-06 03:54:57,188 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.7 pTM=0.525 ipTM=0.142 tol=0.854 2024-12-06 03:55:09,715 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.5 pTM=0.521 ipTM=0.138 tol=1.08 2024-12-06 03:55:22,239 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.6 pTM=0.521 ipTM=0.139 tol=1.09 2024-12-06 03:55:34,769 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.4 pTM=0.522 ipTM=0.142 tol=1.36 2024-12-06 03:55:47,310 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.4 pTM=0.523 ipTM=0.141 tol=0.79 2024-12-06 03:55:59,844 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.5 pTM=0.523 ipTM=0.141 tol=0.957 2024-12-06 03:56:12,370 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.9 pTM=0.52 ipTM=0.144 tol=0.702 2024-12-06 03:56:24,908 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.5 pTM=0.524 ipTM=0.144 tol=0.992 2024-12-06 03:56:37,446 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.5 pTM=0.521 ipTM=0.143 tol=1.14 2024-12-06 03:56:37,446 alphafold2_multimer_v3_model_3_seed_000 took 388.3s (30 recycles) 2024-12-06 03:56:50,381 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.9 pTM=0.527 ipTM=0.14 2024-12-06 03:57:02,951 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72.5 pTM=0.508 ipTM=0.115 tol=6.58 2024-12-06 03:57:15,529 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.6 pTM=0.505 ipTM=0.124 tol=14.3 2024-12-06 03:57:28,098 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.8 pTM=0.519 ipTM=0.146 tol=10.2 2024-12-06 03:57:40,656 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.5 pTM=0.527 ipTM=0.141 tol=5.94 2024-12-06 03:57:53,208 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.2 pTM=0.526 ipTM=0.138 tol=1.57 2024-12-06 03:58:05,763 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.2 pTM=0.529 ipTM=0.141 tol=1.51 2024-12-06 03:58:18,324 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.4 pTM=0.533 ipTM=0.144 tol=1.96 2024-12-06 03:58:30,887 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.1 pTM=0.533 ipTM=0.143 tol=2.23 2024-12-06 03:58:43,443 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.4 pTM=0.532 ipTM=0.142 tol=2.09 2024-12-06 03:58:56,015 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.4 pTM=0.533 ipTM=0.144 tol=5.55 2024-12-06 03:59:08,577 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.9 pTM=0.537 ipTM=0.144 tol=2.39 2024-12-06 03:59:21,139 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.4 pTM=0.536 ipTM=0.144 tol=4.34 2024-12-06 03:59:33,697 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.3 pTM=0.534 ipTM=0.143 tol=2.36 2024-12-06 03:59:46,255 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71 pTM=0.532 ipTM=0.142 tol=2.12 2024-12-06 03:59:58,806 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.9 pTM=0.531 ipTM=0.142 tol=2.07 2024-12-06 04:00:11,372 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=71.1 pTM=0.535 ipTM=0.142 tol=2.24 2024-12-06 04:00:23,923 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.5 pTM=0.534 ipTM=0.143 tol=2.58 2024-12-06 04:00:36,473 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.9 pTM=0.531 ipTM=0.143 tol=2.12 2024-12-06 04:00:49,022 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.4 pTM=0.532 ipTM=0.141 tol=2.34 2024-12-06 04:01:01,562 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.1 pTM=0.531 ipTM=0.139 tol=1.19 2024-12-06 04:01:14,099 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.5 pTM=0.533 ipTM=0.142 tol=0.898 2024-12-06 04:01:26,641 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.2 pTM=0.533 ipTM=0.14 tol=1.97 2024-12-06 04:01:39,182 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.2 pTM=0.53 ipTM=0.139 tol=2.04 2024-12-06 04:01:51,733 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.5 pTM=0.535 ipTM=0.144 tol=1.46 2024-12-06 04:02:04,281 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.4 pTM=0.534 ipTM=0.143 tol=1.41 2024-12-06 04:02:16,822 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.9 pTM=0.531 ipTM=0.141 tol=1.45 2024-12-06 04:02:29,363 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.5 pTM=0.533 ipTM=0.141 tol=1.79 2024-12-06 04:02:41,901 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.7 pTM=0.533 ipTM=0.146 tol=1.62 2024-12-06 04:02:54,440 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.1 pTM=0.533 ipTM=0.143 tol=1.22 2024-12-06 04:03:06,981 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.1 pTM=0.532 ipTM=0.143 tol=1.96 2024-12-06 04:03:06,982 alphafold2_multimer_v3_model_4_seed_000 took 389.1s (30 recycles) 2024-12-06 04:03:19,863 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.8 pTM=0.559 ipTM=0.232 2024-12-06 04:03:32,405 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=70.8 pTM=0.538 ipTM=0.162 tol=7.59 2024-12-06 04:03:44,939 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.1 pTM=0.523 ipTM=0.135 tol=3.28 2024-12-06 04:03:57,504 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.8 pTM=0.514 ipTM=0.107 tol=4.09 2024-12-06 04:04:10,051 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.2 pTM=0.527 ipTM=0.131 tol=25.1 2024-12-06 04:04:22,585 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69 pTM=0.536 ipTM=0.158 tol=4.05 2024-12-06 04:04:35,136 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.7 pTM=0.539 ipTM=0.16 tol=3.77 2024-12-06 04:04:47,687 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.6 pTM=0.538 ipTM=0.157 tol=3.98 2024-12-06 04:05:00,228 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.8 pTM=0.537 ipTM=0.155 tol=2.83 2024-12-06 04:05:12,780 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.9 pTM=0.538 ipTM=0.156 tol=1.09 2024-12-06 04:05:25,328 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.6 pTM=0.537 ipTM=0.155 tol=0.926 2024-12-06 04:05:37,889 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69 pTM=0.54 ipTM=0.157 tol=0.869 2024-12-06 04:05:50,438 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.2 pTM=0.539 ipTM=0.155 tol=1.35 2024-12-06 04:06:02,995 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.9 pTM=0.539 ipTM=0.16 tol=1.39 2024-12-06 04:06:15,542 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.8 pTM=0.538 ipTM=0.159 tol=1.2 2024-12-06 04:06:28,094 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.8 pTM=0.536 ipTM=0.153 tol=2.41 2024-12-06 04:06:40,647 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.9 pTM=0.541 ipTM=0.161 tol=1.48 2024-12-06 04:06:53,202 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.2 pTM=0.539 ipTM=0.154 tol=1.36 2024-12-06 04:07:05,746 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.6 pTM=0.536 ipTM=0.158 tol=1.36 2024-12-06 04:07:18,298 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.8 pTM=0.536 ipTM=0.154 tol=1.22 2024-12-06 04:07:30,852 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.8 pTM=0.539 ipTM=0.161 tol=1.5 2024-12-06 04:07:43,392 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.8 pTM=0.538 ipTM=0.159 tol=1.39 2024-12-06 04:07:55,943 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69 pTM=0.54 ipTM=0.16 tol=1.31 2024-12-06 04:08:08,498 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.9 pTM=0.535 ipTM=0.152 tol=0.83 2024-12-06 04:08:21,043 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69 pTM=0.538 ipTM=0.16 tol=1.04 2024-12-06 04:08:33,598 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.9 pTM=0.536 ipTM=0.157 tol=1.37 2024-12-06 04:08:46,153 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.8 pTM=0.538 ipTM=0.16 tol=1.2 2024-12-06 04:08:58,704 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69 pTM=0.536 ipTM=0.154 tol=1.48 2024-12-06 04:09:11,249 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.3 pTM=0.534 ipTM=0.155 tol=1.61 2024-12-06 04:09:23,802 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.8 pTM=0.537 ipTM=0.157 tol=1.48 2024-12-06 04:09:36,340 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.2 pTM=0.536 ipTM=0.161 tol=1.65 2024-12-06 04:09:36,340 alphafold2_multimer_v3_model_5_seed_000 took 389.0s (30 recycles) 2024-12-06 04:09:36,736 reranking models by 'multimer' metric 2024-12-06 04:09:40,312 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 04:10:42,032 Relaxation took 65.3s 2024-12-06 04:10:42,032 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.2 pTM=0.536 ipTM=0.161 2024-12-06 04:11:14,932 Relaxation took 32.9s 2024-12-06 04:11:14,932 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.4 pTM=0.526 ipTM=0.163 2024-12-06 04:12:14,664 Relaxation took 59.7s 2024-12-06 04:12:14,665 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.1 pTM=0.532 ipTM=0.143 2024-12-06 04:13:41,966 Relaxation took 87.3s 2024-12-06 04:13:41,966 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.5 pTM=0.521 ipTM=0.143 2024-12-06 04:14:10,990 Relaxation took 29.0s 2024-12-06 04:14:10,991 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.1 pTM=0.526 ipTM=0.135 2024-12-06 04:14:12,420 Done