2024-12-06 03:48:31,445 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 03:48:31,759 Running on GPU 2024-12-06 03:48:35,742 Found 6 citations for tools or databases 2024-12-06 03:48:35,742 Query 1/1: FBXO42_SKP1 (length 880) 2024-12-06 03:48:36,044 Sleeping for 9s. Reason: PENDING 2024-12-06 03:48:45,301 Sleeping for 7s. Reason: RUNNING 2024-12-06 03:48:52,563 Sleeping for 7s. Reason: RUNNING 2024-12-06 03:48:59,821 Sleeping for 10s. Reason: RUNNING 2024-12-06 03:49:10,078 Sleeping for 5s. Reason: RUNNING 2024-12-06 03:49:15,328 Sleeping for 7s. Reason: RUNNING 2024-12-06 03:49:22,581 Sleeping for 8s. Reason: RUNNING 2024-12-06 03:49:30,841 Sleeping for 9s. Reason: RUNNING 2024-12-06 03:49:40,099 Sleeping for 10s. Reason: RUNNING 2024-12-06 03:49:50,358 Sleeping for 10s. Reason: RUNNING 2024-12-06 03:50:00,619 Sleeping for 10s. Reason: RUNNING 2024-12-06 03:50:10,879 Sleeping for 8s. Reason: RUNNING 2024-12-06 03:50:19,138 Sleeping for 5s. Reason: RUNNING 2024-12-06 03:50:24,390 Sleeping for 10s. Reason: RUNNING 2024-12-06 03:50:34,650 Sleeping for 8s. Reason: RUNNING 2024-12-06 03:50:44,543 Sleeping for 6s. Reason: PENDING 2024-12-06 03:50:50,795 Sleeping for 6s. Reason: RUNNING 2024-12-06 03:50:57,056 Sleeping for 8s. Reason: RUNNING 2024-12-06 03:51:05,314 Sleeping for 7s. Reason: RUNNING 2024-12-06 03:51:12,575 Sleeping for 10s. Reason: RUNNING 2024-12-06 03:51:22,840 Sleeping for 5s. Reason: RUNNING 2024-12-06 03:51:28,101 Sleeping for 9s. Reason: RUNNING 2024-12-06 03:51:37,354 Sleeping for 8s. Reason: RUNNING 2024-12-06 03:51:45,612 Sleeping for 7s. Reason: RUNNING 2024-12-06 03:51:52,880 Sleeping for 10s. Reason: RUNNING 2024-12-06 03:52:05,687 Setting max_seq=508, max_extra_seq=2048 2024-12-06 03:54:13,114 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.6 pTM=0.631 ipTM=0.922 2024-12-06 03:54:27,766 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.4 pTM=0.631 ipTM=0.923 tol=13.1 2024-12-06 03:54:42,452 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.7 pTM=0.629 ipTM=0.923 tol=4.34 2024-12-06 03:54:57,147 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.6 pTM=0.627 ipTM=0.922 tol=3.46 2024-12-06 03:55:11,857 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.7 pTM=0.627 ipTM=0.925 tol=2.89 2024-12-06 03:55:26,582 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.6 pTM=0.626 ipTM=0.924 tol=2.76 2024-12-06 03:55:41,342 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.7 pTM=0.627 ipTM=0.926 tol=4.44 2024-12-06 03:55:56,090 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.7 pTM=0.626 ipTM=0.924 tol=4.48 2024-12-06 03:56:10,842 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63.9 pTM=0.629 ipTM=0.927 tol=1.55 2024-12-06 03:56:25,614 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.8 pTM=0.629 ipTM=0.928 tol=2.15 2024-12-06 03:56:40,368 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.9 pTM=0.629 ipTM=0.928 tol=2.03 2024-12-06 03:56:55,123 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.8 pTM=0.627 ipTM=0.927 tol=0.993 2024-12-06 03:57:09,884 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.8 pTM=0.627 ipTM=0.927 tol=2.07 2024-12-06 03:57:24,672 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.9 pTM=0.628 ipTM=0.929 tol=2.1 2024-12-06 03:57:39,428 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.9 pTM=0.628 ipTM=0.928 tol=2.1 2024-12-06 03:57:54,173 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.8 pTM=0.627 ipTM=0.927 tol=2.13 2024-12-06 03:58:08,959 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.9 pTM=0.628 ipTM=0.929 tol=1.23 2024-12-06 03:58:23,738 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.8 pTM=0.626 ipTM=0.928 tol=0.995 2024-12-06 03:58:38,529 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.9 pTM=0.629 ipTM=0.929 tol=1.68 2024-12-06 03:58:53,318 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.9 pTM=0.628 ipTM=0.927 tol=1.15 2024-12-06 03:59:08,092 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64 pTM=0.629 ipTM=0.928 tol=2.49 2024-12-06 03:59:22,852 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.9 pTM=0.628 ipTM=0.927 tol=2.22 2024-12-06 03:59:37,592 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.8 pTM=0.627 ipTM=0.928 tol=1.68 2024-12-06 03:59:52,320 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.9 pTM=0.626 ipTM=0.929 tol=3.91 2024-12-06 04:00:07,057 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.9 pTM=0.627 ipTM=0.929 tol=3.83 2024-12-06 04:00:21,798 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.9 pTM=0.628 ipTM=0.928 tol=1.86 2024-12-06 04:00:36,543 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.8 pTM=0.628 ipTM=0.929 tol=1.75 2024-12-06 04:00:51,271 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.7 pTM=0.625 ipTM=0.926 tol=2.15 2024-12-06 04:01:05,990 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.8 pTM=0.626 ipTM=0.926 tol=1.92 2024-12-06 04:01:20,713 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.8 pTM=0.626 ipTM=0.927 tol=1.82 2024-12-06 04:01:35,443 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.8 pTM=0.626 ipTM=0.927 tol=2.01 2024-12-06 04:01:35,444 alphafold2_multimer_v3_model_1_seed_000 took 564.6s (30 recycles) 2024-12-06 04:01:50,710 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.3 pTM=0.631 ipTM=0.921 2024-12-06 04:02:05,574 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63 pTM=0.63 ipTM=0.923 tol=9.52 2024-12-06 04:02:20,419 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.2 pTM=0.629 ipTM=0.927 tol=6.09 2024-12-06 04:02:35,248 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.3 pTM=0.63 ipTM=0.926 tol=9.09 2024-12-06 04:02:50,115 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.8 pTM=0.638 ipTM=0.927 tol=10.5 2024-12-06 04:03:04,955 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.4 pTM=0.646 ipTM=0.93 tol=4.99 2024-12-06 04:03:19,828 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.7 pTM=0.648 ipTM=0.933 tol=2.89 2024-12-06 04:03:34,676 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.6 pTM=0.645 ipTM=0.93 tol=1.88 2024-12-06 04:03:49,529 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.8 pTM=0.647 ipTM=0.933 tol=1.38 2024-12-06 04:04:04,384 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.8 pTM=0.647 ipTM=0.934 tol=1.04 2024-12-06 04:04:19,212 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.9 pTM=0.647 ipTM=0.933 tol=1.08 2024-12-06 04:04:34,010 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.9 pTM=0.647 ipTM=0.932 tol=3.19 2024-12-06 04:04:48,816 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.9 pTM=0.647 ipTM=0.933 tol=3.54 2024-12-06 04:05:03,618 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.9 pTM=0.648 ipTM=0.935 tol=0.911 2024-12-06 04:05:18,411 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.9 pTM=0.648 ipTM=0.934 tol=1.03 2024-12-06 04:05:33,196 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.8 pTM=0.647 ipTM=0.934 tol=2.93 2024-12-06 04:05:47,998 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65 pTM=0.649 ipTM=0.935 tol=2.73 2024-12-06 04:06:02,784 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.9 pTM=0.648 ipTM=0.934 tol=0.62 2024-12-06 04:06:17,599 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65 pTM=0.65 ipTM=0.935 tol=0.817 2024-12-06 04:06:32,402 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.9 pTM=0.649 ipTM=0.935 tol=0.696 2024-12-06 04:06:47,195 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.9 pTM=0.648 ipTM=0.933 tol=0.911 2024-12-06 04:07:01,989 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.9 pTM=0.648 ipTM=0.934 tol=0.753 2024-12-06 04:07:16,777 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.9 pTM=0.648 ipTM=0.934 tol=0.693 2024-12-06 04:07:31,565 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.9 pTM=0.647 ipTM=0.935 tol=0.724 2024-12-06 04:07:46,360 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65 pTM=0.649 ipTM=0.936 tol=0.677 2024-12-06 04:08:01,196 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65 pTM=0.649 ipTM=0.936 tol=0.643 2024-12-06 04:08:15,988 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65 pTM=0.649 ipTM=0.935 tol=2.44 2024-12-06 04:08:30,784 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.9 pTM=0.648 ipTM=0.933 tol=2.01 2024-12-06 04:08:45,602 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65 pTM=0.649 ipTM=0.934 tol=2.55 2024-12-06 04:09:00,396 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.9 pTM=0.647 ipTM=0.934 tol=2.79 2024-12-06 04:09:15,199 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.9 pTM=0.647 ipTM=0.934 tol=1.14 2024-12-06 04:09:15,200 alphafold2_multimer_v3_model_2_seed_000 took 459.3s (30 recycles) 2024-12-06 04:09:30,509 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63 pTM=0.629 ipTM=0.918 2024-12-06 04:09:45,336 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.7 pTM=0.632 ipTM=0.925 tol=10.3 2024-12-06 04:10:00,177 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.8 pTM=0.633 ipTM=0.925 tol=9.26 2024-12-06 04:10:15,031 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.9 pTM=0.633 ipTM=0.927 tol=4.72 2024-12-06 04:10:29,877 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64 pTM=0.634 ipTM=0.929 tol=3.52 2024-12-06 04:10:44,704 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.9 pTM=0.632 ipTM=0.928 tol=2.04 2024-12-06 04:10:59,554 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64 pTM=0.633 ipTM=0.929 tol=1.76 2024-12-06 04:11:14,381 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.9 pTM=0.632 ipTM=0.927 tol=1.56 2024-12-06 04:11:29,225 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64 pTM=0.634 ipTM=0.93 tol=1.71 2024-12-06 04:11:44,073 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.1 pTM=0.635 ipTM=0.931 tol=2.1 2024-12-06 04:11:58,924 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.1 pTM=0.635 ipTM=0.931 tol=2.69 2024-12-06 04:12:13,768 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.1 pTM=0.635 ipTM=0.93 tol=2.55 2024-12-06 04:12:28,637 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.1 pTM=0.635 ipTM=0.931 tol=5.3 2024-12-06 04:12:43,511 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.1 pTM=0.636 ipTM=0.931 tol=3.43 2024-12-06 04:12:58,365 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.1 pTM=0.635 ipTM=0.931 tol=3.72 2024-12-06 04:13:13,201 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.9 pTM=0.634 ipTM=0.928 tol=2.27 2024-12-06 04:13:28,088 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.1 pTM=0.635 ipTM=0.93 tol=1.83 2024-12-06 04:13:42,953 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.2 pTM=0.637 ipTM=0.931 tol=2.04 2024-12-06 04:13:57,799 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.1 pTM=0.637 ipTM=0.931 tol=5.28 2024-12-06 04:14:12,668 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.2 pTM=0.636 ipTM=0.931 tol=5.41 2024-12-06 04:14:27,514 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.1 pTM=0.636 ipTM=0.93 tol=1.73 2024-12-06 04:14:42,357 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.1 pTM=0.634 ipTM=0.929 tol=2.36 2024-12-06 04:14:57,215 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.1 pTM=0.635 ipTM=0.931 tol=1.23 2024-12-06 04:15:12,066 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.2 pTM=0.636 ipTM=0.931 tol=1.39 2024-12-06 04:15:26,907 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.1 pTM=0.636 ipTM=0.931 tol=5.83 2024-12-06 04:15:41,777 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.1 pTM=0.636 ipTM=0.93 tol=5.7 2024-12-06 04:15:56,670 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.1 pTM=0.637 ipTM=0.93 tol=1.09 2024-12-06 04:16:11,528 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.2 pTM=0.637 ipTM=0.93 tol=1.77 2024-12-06 04:16:26,392 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.1 pTM=0.635 ipTM=0.929 tol=1.63 2024-12-06 04:16:41,240 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64 pTM=0.634 ipTM=0.928 tol=1.27 2024-12-06 04:16:56,093 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.1 pTM=0.636 ipTM=0.93 tol=1.2 2024-12-06 04:16:56,094 alphafold2_multimer_v3_model_3_seed_000 took 460.4s (30 recycles) 2024-12-06 04:17:11,385 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62 pTM=0.63 ipTM=0.921 2024-12-06 04:17:26,255 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.7 pTM=0.635 ipTM=0.931 tol=9.27 2024-12-06 04:17:41,132 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64 pTM=0.638 ipTM=0.93 tol=4.82 2024-12-06 04:17:55,994 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.3 pTM=0.638 ipTM=0.93 tol=5.54 2024-12-06 04:18:10,876 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.1 pTM=0.637 ipTM=0.93 tol=4.22 2024-12-06 04:18:25,731 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.2 pTM=0.64 ipTM=0.931 tol=2.47 2024-12-06 04:18:40,583 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.4 pTM=0.64 ipTM=0.93 tol=6.82 2024-12-06 04:18:55,425 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.2 pTM=0.638 ipTM=0.928 tol=2.69 2024-12-06 04:19:10,290 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.3 pTM=0.64 ipTM=0.93 tol=2.91 2024-12-06 04:19:25,132 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.3 pTM=0.639 ipTM=0.931 tol=3.95 2024-12-06 04:19:39,988 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.4 pTM=0.643 ipTM=0.931 tol=7.39 2024-12-06 04:19:54,802 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.4 pTM=0.643 ipTM=0.93 tol=5 2024-12-06 04:20:09,628 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.5 pTM=0.644 ipTM=0.931 tol=2.95 2024-12-06 04:20:24,460 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.5 pTM=0.646 ipTM=0.931 tol=5.69 2024-12-06 04:20:39,287 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.4 pTM=0.644 ipTM=0.931 tol=1.51 2024-12-06 04:20:54,103 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.4 pTM=0.645 ipTM=0.931 tol=5.48 2024-12-06 04:21:08,920 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.5 pTM=0.644 ipTM=0.932 tol=5.63 2024-12-06 04:21:23,745 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.6 pTM=0.646 ipTM=0.932 tol=1.31 2024-12-06 04:21:38,611 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.6 pTM=0.646 ipTM=0.934 tol=1.67 2024-12-06 04:21:53,456 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.6 pTM=0.646 ipTM=0.932 tol=3.21 2024-12-06 04:22:08,283 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.7 pTM=0.647 ipTM=0.933 tol=2.62 2024-12-06 04:22:23,134 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.6 pTM=0.645 ipTM=0.931 tol=2.92 2024-12-06 04:22:37,983 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.6 pTM=0.646 ipTM=0.934 tol=1.37 2024-12-06 04:22:52,819 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.7 pTM=0.646 ipTM=0.933 tol=1.21 2024-12-06 04:23:07,660 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.6 pTM=0.645 ipTM=0.934 tol=3.82 2024-12-06 04:23:22,504 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.8 pTM=0.646 ipTM=0.935 tol=3.73 2024-12-06 04:23:37,336 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.6 pTM=0.646 ipTM=0.934 tol=3.06 2024-12-06 04:23:52,191 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.5 pTM=0.644 ipTM=0.932 tol=3.39 2024-12-06 04:24:07,062 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.6 pTM=0.645 ipTM=0.932 tol=4.53 2024-12-06 04:24:21,903 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.6 pTM=0.646 ipTM=0.933 tol=3.31 2024-12-06 04:24:36,777 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.5 pTM=0.644 ipTM=0.933 tol=2.86 2024-12-06 04:24:36,778 alphafold2_multimer_v3_model_4_seed_000 took 460.2s (30 recycles) 2024-12-06 04:24:52,088 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.3 pTM=0.625 ipTM=0.919 2024-12-06 04:25:06,924 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63 pTM=0.626 ipTM=0.921 tol=9.52 2024-12-06 04:25:21,762 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.1 pTM=0.625 ipTM=0.924 tol=11.4 2024-12-06 04:25:36,593 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.4 pTM=0.628 ipTM=0.923 tol=7.65 2024-12-06 04:25:51,439 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.6 pTM=0.63 ipTM=0.926 tol=10.5 2024-12-06 04:26:06,292 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.9 pTM=0.635 ipTM=0.929 tol=7.8 2024-12-06 04:26:21,156 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.2 pTM=0.643 ipTM=0.931 tol=4.44 2024-12-06 04:26:36,003 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.1 pTM=0.64 ipTM=0.929 tol=4.52 2024-12-06 04:26:50,860 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.2 pTM=0.642 ipTM=0.932 tol=4.37 2024-12-06 04:27:05,705 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.2 pTM=0.642 ipTM=0.933 tol=1.85 2024-12-06 04:27:20,541 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.2 pTM=0.642 ipTM=0.932 tol=2.05 2024-12-06 04:27:35,376 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.2 pTM=0.642 ipTM=0.931 tol=1.75 2024-12-06 04:27:50,222 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.2 pTM=0.641 ipTM=0.932 tol=3.76 2024-12-06 04:28:05,080 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.2 pTM=0.642 ipTM=0.933 tol=3.37 2024-12-06 04:28:19,894 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.2 pTM=0.64 ipTM=0.932 tol=3.69 2024-12-06 04:28:34,746 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.1 pTM=0.641 ipTM=0.932 tol=3.05 2024-12-06 04:28:49,596 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.2 pTM=0.64 ipTM=0.933 tol=2.05 2024-12-06 04:29:04,429 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.2 pTM=0.641 ipTM=0.933 tol=2.09 2024-12-06 04:29:19,271 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.2 pTM=0.642 ipTM=0.933 tol=2.05 2024-12-06 04:29:34,097 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.1 pTM=0.64 ipTM=0.932 tol=1.23 2024-12-06 04:29:48,908 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.1 pTM=0.642 ipTM=0.932 tol=1.08 2024-12-06 04:30:03,716 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64 pTM=0.639 ipTM=0.93 tol=1.14 2024-12-06 04:30:18,532 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.1 pTM=0.64 ipTM=0.933 tol=3.91 2024-12-06 04:30:33,337 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.1 pTM=0.64 ipTM=0.932 tol=1.31 2024-12-06 04:30:48,143 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.1 pTM=0.639 ipTM=0.932 tol=3.15 2024-12-06 04:31:02,939 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.1 pTM=0.639 ipTM=0.932 tol=2.94 2024-12-06 04:31:17,735 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.1 pTM=0.64 ipTM=0.931 tol=3.53 2024-12-06 04:31:32,534 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64 pTM=0.638 ipTM=0.93 tol=3.41 2024-12-06 04:31:47,362 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.1 pTM=0.641 ipTM=0.931 tol=3.44 2024-12-06 04:32:02,188 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.1 pTM=0.639 ipTM=0.931 tol=3.32 2024-12-06 04:32:17,032 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64 pTM=0.638 ipTM=0.931 tol=3.41 2024-12-06 04:32:17,033 alphafold2_multimer_v3_model_5_seed_000 took 459.8s (30 recycles) 2024-12-06 04:32:17,525 reranking models by 'multimer' metric 2024-12-06 04:32:21,136 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 04:33:25,770 Relaxation took 68.2s 2024-12-06 04:33:25,770 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.9 pTM=0.647 ipTM=0.934 2024-12-06 04:34:20,515 Relaxation took 54.7s 2024-12-06 04:34:20,516 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.5 pTM=0.644 ipTM=0.933 2024-12-06 04:35:15,092 Relaxation took 54.6s 2024-12-06 04:35:15,092 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64 pTM=0.638 ipTM=0.931 2024-12-06 04:36:10,820 Relaxation took 55.7s 2024-12-06 04:36:10,820 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.1 pTM=0.636 ipTM=0.93 2024-12-06 04:37:16,645 Relaxation took 65.8s 2024-12-06 04:37:16,645 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.8 pTM=0.626 ipTM=0.927 2024-12-06 04:37:18,239 Done