2024-12-06 04:23:34,269 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 04:23:34,566 Running on GPU
2024-12-06 04:23:39,073 Found 6 citations for tools or databases
2024-12-06 04:23:39,073 Query 1/1: FBXO45_PIGN (length 1217)
2024-12-06 04:23:39,387 Sleeping for 10s. Reason: PENDING
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2024-12-06 04:26:43,943 Sleeping for 6s. Reason: PENDING
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2024-12-06 04:28:06,051 Sleeping for 7s. Reason: RUNNING
2024-12-06 04:28:13,310 Sleeping for 9s. Reason: RUNNING
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2024-12-06 04:28:37,501 Setting max_seq=508, max_extra_seq=2048
2024-12-06 04:32:02,920 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=84.8 pTM=0.691 ipTM=0.148
2024-12-06 04:32:39,412 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=83.4 pTM=0.69 ipTM=0.158 tol=5.68
2024-12-06 04:33:16,033 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=83.1 pTM=0.672 ipTM=0.165 tol=5.99
2024-12-06 04:33:52,778 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=83.2 pTM=0.678 ipTM=0.168 tol=1.03
2024-12-06 04:34:29,553 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=83.1 pTM=0.674 ipTM=0.17 tol=0.943
2024-12-06 04:35:06,370 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=83.2 pTM=0.671 ipTM=0.169 tol=0.491
2024-12-06 04:35:06,371 alphafold2_multimer_v3_model_1_seed_000 took 383.3s (5 recycles)
2024-12-06 04:35:44,180 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=83.2 pTM=0.677 ipTM=0.151
2024-12-06 04:36:21,005 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=82.7 pTM=0.663 ipTM=0.183 tol=8.14
2024-12-06 04:36:57,899 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=83.8 pTM=0.678 ipTM=0.181 tol=2.2
2024-12-06 04:37:34,774 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=83.4 pTM=0.671 ipTM=0.189 tol=2.44
2024-12-06 04:38:11,616 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=83.2 pTM=0.669 ipTM=0.187 tol=1.18
2024-12-06 04:38:48,516 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=83.5 pTM=0.671 ipTM=0.186 tol=2.04
2024-12-06 04:39:25,411 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=83.8 pTM=0.678 ipTM=0.19 tol=0.989
2024-12-06 04:40:02,302 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=83.8 pTM=0.675 ipTM=0.189 tol=1.3
2024-12-06 04:40:39,189 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=83.8 pTM=0.674 ipTM=0.188 tol=0.91
2024-12-06 04:41:16,061 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=83.8 pTM=0.682 ipTM=0.192 tol=0.426
2024-12-06 04:41:16,062 alphafold2_multimer_v3_model_2_seed_000 took 368.8s (9 recycles)
2024-12-06 04:41:53,981 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=84.5 pTM=0.688 ipTM=0.173
2024-12-06 04:42:30,951 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=85 pTM=0.7 ipTM=0.203 tol=6.62
2024-12-06 04:43:07,827 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=84.4 pTM=0.687 ipTM=0.214 tol=2.14
2024-12-06 04:43:44,704 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=84.2 pTM=0.692 ipTM=0.214 tol=1.18
2024-12-06 04:44:21,626 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=84.3 pTM=0.693 ipTM=0.214 tol=0.764
2024-12-06 04:44:58,506 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=84.3 pTM=0.693 ipTM=0.219 tol=0.899
2024-12-06 04:45:35,434 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=84.5 pTM=0.699 ipTM=0.223 tol=1.26
2024-12-06 04:46:12,317 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=84.4 pTM=0.695 ipTM=0.224 tol=1.11
2024-12-06 04:46:49,179 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=84.4 pTM=0.694 ipTM=0.222 tol=0.949
2024-12-06 04:47:26,035 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=84.4 pTM=0.697 ipTM=0.233 tol=0.889
2024-12-06 04:48:02,923 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=84.4 pTM=0.697 ipTM=0.226 tol=0.326
2024-12-06 04:48:02,924 alphafold2_multimer_v3_model_3_seed_000 took 406.0s (10 recycles)
2024-12-06 04:48:40,864 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=84.4 pTM=0.681 ipTM=0.146
2024-12-06 04:49:17,852 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=83.6 pTM=0.685 ipTM=0.158 tol=5.48
2024-12-06 04:49:54,786 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=83.6 pTM=0.678 ipTM=0.171 tol=6.67
2024-12-06 04:50:31,717 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=83.9 pTM=0.681 ipTM=0.17 tol=4.05
2024-12-06 04:51:08,631 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=83.6 pTM=0.68 ipTM=0.171 tol=2.75
2024-12-06 04:51:45,548 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=83.6 pTM=0.677 ipTM=0.17 tol=2.7
2024-12-06 04:52:22,500 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=83.8 pTM=0.682 ipTM=0.168 tol=1.53
2024-12-06 04:52:59,422 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=83.6 pTM=0.679 ipTM=0.166 tol=1.48
2024-12-06 04:53:36,318 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=83.6 pTM=0.675 ipTM=0.165 tol=1.35
2024-12-06 04:54:13,244 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=83.6 pTM=0.681 ipTM=0.171 tol=1.26
2024-12-06 04:54:50,274 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=83.6 pTM=0.681 ipTM=0.174 tol=2.02
2024-12-06 04:55:27,377 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=83.5 pTM=0.682 ipTM=0.179 tol=1.28
2024-12-06 04:56:04,472 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=83.4 pTM=0.68 ipTM=0.178 tol=1.38
2024-12-06 04:56:41,518 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=83.1 pTM=0.677 ipTM=0.179 tol=0.875
2024-12-06 04:57:18,561 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=83.3 pTM=0.681 ipTM=0.182 tol=1.69
2024-12-06 04:57:55,584 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=83.5 pTM=0.684 ipTM=0.183 tol=1.01
2024-12-06 04:58:32,574 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=83.4 pTM=0.683 ipTM=0.186 tol=0.553
2024-12-06 04:59:09,561 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=83.4 pTM=0.683 ipTM=0.189 tol=1.7
2024-12-06 04:59:46,516 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=83.2 pTM=0.68 ipTM=0.191 tol=1.39
2024-12-06 05:00:23,483 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=83.4 pTM=0.682 ipTM=0.191 tol=0.749
2024-12-06 05:01:00,430 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=83.2 pTM=0.684 ipTM=0.191 tol=0.924
2024-12-06 05:01:37,390 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=83.2 pTM=0.686 ipTM=0.195 tol=1.34
2024-12-06 05:02:14,334 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=83.5 pTM=0.681 ipTM=0.193 tol=2.54
2024-12-06 05:02:51,280 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=83.2 pTM=0.684 ipTM=0.191 tol=0.794
2024-12-06 05:03:28,249 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=83.3 pTM=0.684 ipTM=0.19 tol=0.6
2024-12-06 05:04:05,215 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=83.3 pTM=0.681 ipTM=0.185 tol=0.996
2024-12-06 05:04:42,139 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=83.3 pTM=0.681 ipTM=0.185 tol=1.31
2024-12-06 05:05:19,064 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=83.4 pTM=0.683 ipTM=0.189 tol=0.764
2024-12-06 05:05:55,949 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=83.3 pTM=0.682 ipTM=0.196 tol=2.45
2024-12-06 05:06:32,834 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=83.4 pTM=0.681 ipTM=0.191 tol=1.22
2024-12-06 05:07:09,728 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=83.3 pTM=0.684 ipTM=0.192 tol=0.968
2024-12-06 05:07:09,729 alphafold2_multimer_v3_model_4_seed_000 took 1145.9s (30 recycles)
2024-12-06 05:07:47,622 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=82.9 pTM=0.678 ipTM=0.165
2024-12-06 05:08:24,687 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=84.1 pTM=0.683 ipTM=0.189 tol=8.62
2024-12-06 05:09:01,752 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=84 pTM=0.682 ipTM=0.181 tol=2.87
2024-12-06 05:09:38,815 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=83.9 pTM=0.679 ipTM=0.186 tol=2.2
2024-12-06 05:10:15,874 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=83.9 pTM=0.677 ipTM=0.186 tol=1.52
2024-12-06 05:10:52,918 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=84 pTM=0.678 ipTM=0.186 tol=1.35
2024-12-06 05:11:29,960 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=84.1 pTM=0.682 ipTM=0.187 tol=0.871
2024-12-06 05:12:06,981 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=84.1 pTM=0.679 ipTM=0.188 tol=0.833
2024-12-06 05:12:43,991 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=84.1 pTM=0.68 ipTM=0.187 tol=0.501
2024-12-06 05:13:20,982 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=84.1 pTM=0.684 ipTM=0.189 tol=0.717
2024-12-06 05:13:57,970 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=84.1 pTM=0.682 ipTM=0.19 tol=0.924
2024-12-06 05:14:34,934 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=84.1 pTM=0.682 ipTM=0.192 tol=0.451
2024-12-06 05:14:34,935 alphafold2_multimer_v3_model_5_seed_000 took 444.3s (11 recycles)
2024-12-06 05:14:35,826 reranking models by 'multimer' metric
2024-12-06 05:14:39,544 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 05:16:57,098 Relaxation took 141.3s
2024-12-06 05:16:57,098 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=84.4 pTM=0.697 ipTM=0.226
2024-12-06 05:19:23,848 Relaxation took 146.7s
2024-12-06 05:19:23,848 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=84.1 pTM=0.682 ipTM=0.192
2024-12-06 05:21:28,075 Relaxation took 124.2s
2024-12-06 05:21:28,075 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=83.3 pTM=0.684 ipTM=0.192
2024-12-06 05:23:28,407 Relaxation took 120.3s
2024-12-06 05:23:28,407 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=83.8 pTM=0.682 ipTM=0.192
2024-12-06 05:25:04,153 Relaxation took 95.7s
2024-12-06 05:25:04,154 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=83.2 pTM=0.671 ipTM=0.169
2024-12-06 05:25:06,516 Done