2024-12-06 05:48:43,280 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 05:48:43,577 Running on GPU 2024-12-06 05:48:47,152 Found 6 citations for tools or databases 2024-12-06 05:48:47,152 Query 1/1: FBXW11_FOXN3 (length 1032) 2024-12-06 05:48:47,422 Sleeping for 6s. Reason: PENDING 2024-12-06 05:48:53,674 Sleeping for 10s. Reason: RUNNING 2024-12-06 05:49:03,935 Sleeping for 9s. Reason: RUNNING 2024-12-06 05:49:13,196 Sleeping for 9s. Reason: RUNNING 2024-12-06 05:49:22,453 Sleeping for 5s. Reason: RUNNING 2024-12-06 05:49:27,727 Sleeping for 9s. Reason: RUNNING 2024-12-06 05:49:36,991 Sleeping for 7s. Reason: RUNNING 2024-12-06 05:49:44,244 Sleeping for 10s. Reason: RUNNING 2024-12-06 05:49:54,515 Sleeping for 10s. Reason: RUNNING 2024-12-06 05:50:04,775 Sleeping for 7s. Reason: RUNNING 2024-12-06 05:50:12,027 Sleeping for 7s. Reason: RUNNING 2024-12-06 05:50:19,288 Sleeping for 8s. Reason: RUNNING 2024-12-06 05:50:27,553 Sleeping for 7s. Reason: RUNNING 2024-12-06 05:50:34,812 Sleeping for 9s. Reason: RUNNING 2024-12-06 05:50:44,067 Sleeping for 5s. Reason: RUNNING 2024-12-06 05:50:49,327 Sleeping for 7s. Reason: RUNNING 2024-12-06 05:50:56,587 Sleeping for 5s. Reason: RUNNING 2024-12-06 05:51:01,846 Sleeping for 6s. Reason: RUNNING 2024-12-06 05:51:09,744 Sleeping for 5s. Reason: PENDING 2024-12-06 05:51:14,999 Sleeping for 8s. Reason: RUNNING 2024-12-06 05:51:23,254 Sleeping for 9s. Reason: RUNNING 2024-12-06 05:51:32,511 Sleeping for 9s. Reason: RUNNING 2024-12-06 05:51:41,771 Sleeping for 8s. Reason: RUNNING 2024-12-06 05:51:50,032 Sleeping for 8s. Reason: RUNNING 2024-12-06 05:51:58,295 Sleeping for 7s. Reason: RUNNING 2024-12-06 05:52:05,560 Sleeping for 8s. Reason: RUNNING 2024-12-06 05:52:13,821 Sleeping for 6s. Reason: RUNNING 2024-12-06 05:52:20,073 Sleeping for 9s. Reason: RUNNING 2024-12-06 05:52:29,333 Sleeping for 6s. Reason: RUNNING 2024-12-06 05:52:39,208 Setting max_seq=508, max_extra_seq=2048 2024-12-06 05:54:49,958 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.9 pTM=0.486 ipTM=0.441 2024-12-06 05:55:10,214 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.5 pTM=0.495 ipTM=0.355 tol=12.3 2024-12-06 05:55:30,596 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.8 pTM=0.49 ipTM=0.279 tol=8.35 2024-12-06 05:55:51,032 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.6 pTM=0.487 ipTM=0.235 tol=6.49 2024-12-06 05:56:11,510 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.5 pTM=0.481 ipTM=0.204 tol=5.31 2024-12-06 05:56:32,065 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.2 pTM=0.48 ipTM=0.196 tol=3.74 2024-12-06 05:56:52,619 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.2 pTM=0.478 ipTM=0.191 tol=2.95 2024-12-06 05:57:13,197 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.2 pTM=0.479 ipTM=0.199 tol=6.72 2024-12-06 05:57:33,814 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.5 pTM=0.48 ipTM=0.216 tol=5.27 2024-12-06 05:57:54,421 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.2 pTM=0.479 ipTM=0.209 tol=3.85 2024-12-06 05:58:15,052 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.3 pTM=0.478 ipTM=0.21 tol=4.86 2024-12-06 05:58:35,684 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.2 pTM=0.477 ipTM=0.216 tol=4.41 2024-12-06 05:58:56,304 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.1 pTM=0.476 ipTM=0.21 tol=3.01 2024-12-06 05:59:16,925 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.4 pTM=0.48 ipTM=0.199 tol=4.55 2024-12-06 05:59:37,541 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.3 pTM=0.478 ipTM=0.203 tol=4.13 2024-12-06 05:59:58,133 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.1 pTM=0.477 ipTM=0.212 tol=5.26 2024-12-06 06:00:18,739 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.4 pTM=0.479 ipTM=0.213 tol=4.34 2024-12-06 06:00:39,324 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.3 pTM=0.48 ipTM=0.218 tol=1.92 2024-12-06 06:00:59,910 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.2 pTM=0.478 ipTM=0.215 tol=3.19 2024-12-06 06:01:20,459 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.3 pTM=0.481 ipTM=0.221 tol=2.98 2024-12-06 06:01:41,011 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.2 pTM=0.48 ipTM=0.211 tol=4.22 2024-12-06 06:02:01,574 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.3 pTM=0.48 ipTM=0.2 tol=3.73 2024-12-06 06:02:22,145 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.2 pTM=0.479 ipTM=0.217 tol=4.28 2024-12-06 06:02:42,735 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.2 pTM=0.481 ipTM=0.219 tol=1.6 2024-12-06 06:03:03,351 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.3 pTM=0.479 ipTM=0.204 tol=3.74 2024-12-06 06:03:23,982 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.2 pTM=0.478 ipTM=0.212 tol=1.82 2024-12-06 06:03:44,612 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.2 pTM=0.478 ipTM=0.209 tol=3.21 2024-12-06 06:04:05,264 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.4 pTM=0.482 ipTM=0.199 tol=2.85 2024-12-06 06:04:25,890 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.9 pTM=0.477 ipTM=0.195 tol=5.27 2024-12-06 06:04:46,524 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.2 pTM=0.48 ipTM=0.217 tol=5.25 2024-12-06 06:05:07,162 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.2 pTM=0.48 ipTM=0.214 tol=4.51 2024-12-06 06:05:07,163 alphafold2_multimer_v3_model_1_seed_000 took 744.5s (30 recycles) 2024-12-06 06:05:28,532 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56.6 pTM=0.473 ipTM=0.369 2024-12-06 06:05:49,263 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58 pTM=0.481 ipTM=0.338 tol=18.1 2024-12-06 06:06:10,016 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58 pTM=0.483 ipTM=0.23 tol=6.39 2024-12-06 06:06:30,759 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.3 pTM=0.485 ipTM=0.262 tol=3.77 2024-12-06 06:06:51,506 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.1 pTM=0.482 ipTM=0.213 tol=5.05 2024-12-06 06:07:12,265 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58 pTM=0.485 ipTM=0.284 tol=4.25 2024-12-06 06:07:33,030 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.3 pTM=0.482 ipTM=0.264 tol=6.02 2024-12-06 06:07:53,796 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.2 pTM=0.481 ipTM=0.213 tol=6.27 2024-12-06 06:08:14,558 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.2 pTM=0.488 ipTM=0.379 tol=3.85 2024-12-06 06:08:35,350 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.4 pTM=0.484 ipTM=0.289 tol=5.91 2024-12-06 06:08:56,161 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.2 pTM=0.483 ipTM=0.228 tol=5.29 2024-12-06 06:09:16,959 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.1 pTM=0.487 ipTM=0.339 tol=6.55 2024-12-06 06:09:37,750 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.3 pTM=0.484 ipTM=0.253 tol=7.68 2024-12-06 06:09:58,539 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.1 pTM=0.483 ipTM=0.208 tol=5.79 2024-12-06 06:10:19,301 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.2 pTM=0.487 ipTM=0.298 tol=5 2024-12-06 06:10:40,104 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.4 pTM=0.485 ipTM=0.28 tol=3.04 2024-12-06 06:11:00,877 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.3 pTM=0.485 ipTM=0.245 tol=3.24 2024-12-06 06:11:21,657 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.2 pTM=0.489 ipTM=0.355 tol=4.64 2024-12-06 06:11:42,444 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.4 pTM=0.485 ipTM=0.251 tol=2.6 2024-12-06 06:12:03,234 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.2 pTM=0.486 ipTM=0.214 tol=4.75 2024-12-06 06:12:24,012 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58 pTM=0.488 ipTM=0.354 tol=3.18 2024-12-06 06:12:44,824 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.3 pTM=0.483 ipTM=0.211 tol=4.59 2024-12-06 06:13:05,595 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.3 pTM=0.483 ipTM=0.213 tol=2.73 2024-12-06 06:13:26,394 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.1 pTM=0.487 ipTM=0.329 tol=5.74 2024-12-06 06:13:47,158 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.2 pTM=0.483 ipTM=0.242 tol=2.44 2024-12-06 06:14:07,923 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.2 pTM=0.482 ipTM=0.221 tol=5.79 2024-12-06 06:14:28,698 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.2 pTM=0.488 ipTM=0.358 tol=5.62 2024-12-06 06:14:49,497 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.4 pTM=0.483 ipTM=0.257 tol=2.18 2024-12-06 06:15:10,265 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.1 pTM=0.484 ipTM=0.208 tol=3.73 2024-12-06 06:15:31,043 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58 pTM=0.488 ipTM=0.341 tol=6.84 2024-12-06 06:15:51,840 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.4 pTM=0.486 ipTM=0.231 tol=3.86 2024-12-06 06:15:51,841 alphafold2_multimer_v3_model_2_seed_000 took 644.0s (30 recycles) 2024-12-06 06:16:13,283 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.2 pTM=0.497 ipTM=0.476 2024-12-06 06:16:34,060 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57.3 pTM=0.507 ipTM=0.32 tol=12.9 2024-12-06 06:16:54,854 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.9 pTM=0.513 ipTM=0.364 tol=6.12 2024-12-06 06:17:15,686 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.8 pTM=0.51 ipTM=0.254 tol=6.34 2024-12-06 06:17:36,508 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.1 pTM=0.51 ipTM=0.328 tol=5.63 2024-12-06 06:17:57,337 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.9 pTM=0.506 ipTM=0.269 tol=5.3 2024-12-06 06:18:18,154 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.7 pTM=0.512 ipTM=0.34 tol=5.12 2024-12-06 06:18:38,987 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.9 pTM=0.508 ipTM=0.303 tol=4.51 2024-12-06 06:18:59,831 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.7 pTM=0.51 ipTM=0.301 tol=4.82 2024-12-06 06:19:20,654 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.9 pTM=0.508 ipTM=0.328 tol=4.19 2024-12-06 06:19:41,468 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.6 pTM=0.505 ipTM=0.274 tol=2.83 2024-12-06 06:20:02,326 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.1 pTM=0.509 ipTM=0.397 tol=4.2 2024-12-06 06:20:23,153 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.6 pTM=0.505 ipTM=0.27 tol=3.55 2024-12-06 06:20:43,983 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.6 pTM=0.506 ipTM=0.362 tol=3.88 2024-12-06 06:21:04,811 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.9 pTM=0.505 ipTM=0.337 tol=3.83 2024-12-06 06:21:25,636 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.8 pTM=0.502 ipTM=0.27 tol=3.01 2024-12-06 06:21:46,469 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.5 pTM=0.503 ipTM=0.329 tol=4.89 2024-12-06 06:22:07,321 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.9 pTM=0.502 ipTM=0.295 tol=3.99 2024-12-06 06:22:28,182 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.8 pTM=0.503 ipTM=0.279 tol=3.75 2024-12-06 06:22:49,004 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.8 pTM=0.509 ipTM=0.411 tol=5.59 2024-12-06 06:23:09,857 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.8 pTM=0.506 ipTM=0.338 tol=3 2024-12-06 06:23:30,682 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.8 pTM=0.506 ipTM=0.284 tol=1.9 2024-12-06 06:23:51,521 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.7 pTM=0.508 ipTM=0.363 tol=2.56 2024-12-06 06:24:12,335 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.9 pTM=0.507 ipTM=0.338 tol=2.12 2024-12-06 06:24:33,178 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.4 pTM=0.504 ipTM=0.289 tol=5.12 2024-12-06 06:24:54,024 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.6 pTM=0.508 ipTM=0.391 tol=5.45 2024-12-06 06:25:14,856 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.8 pTM=0.507 ipTM=0.337 tol=2.27 2024-12-06 06:25:35,718 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.8 pTM=0.507 ipTM=0.282 tol=2.34 2024-12-06 06:25:56,545 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.6 pTM=0.506 ipTM=0.37 tol=2.04 2024-12-06 06:26:17,380 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.9 pTM=0.51 ipTM=0.345 tol=2.68 2024-12-06 06:26:38,249 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.7 pTM=0.506 ipTM=0.284 tol=2.86 2024-12-06 06:26:38,250 alphafold2_multimer_v3_model_3_seed_000 took 645.7s (30 recycles) 2024-12-06 06:26:59,633 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.4 pTM=0.49 ipTM=0.228 2024-12-06 06:27:20,366 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.6 pTM=0.492 ipTM=0.417 tol=10.9 2024-12-06 06:27:41,214 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.9 pTM=0.487 ipTM=0.207 tol=8.2 2024-12-06 06:28:02,060 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.2 pTM=0.487 ipTM=0.207 tol=5.77 2024-12-06 06:28:22,883 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57 pTM=0.492 ipTM=0.277 tol=6.57 2024-12-06 06:28:43,701 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.4 pTM=0.492 ipTM=0.26 tol=8.43 2024-12-06 06:29:04,541 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.2 pTM=0.495 ipTM=0.231 tol=7.38 2024-12-06 06:29:25,388 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.6 pTM=0.5 ipTM=0.353 tol=3.82 2024-12-06 06:29:46,227 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.6 pTM=0.5 ipTM=0.343 tol=3.97 2024-12-06 06:30:07,050 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.6 pTM=0.498 ipTM=0.26 tol=3.29 2024-12-06 06:30:27,873 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.2 pTM=0.501 ipTM=0.257 tol=3.73 2024-12-06 06:30:48,687 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.7 pTM=0.503 ipTM=0.267 tol=7.71 2024-12-06 06:31:09,496 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.8 pTM=0.505 ipTM=0.275 tol=7.81 2024-12-06 06:31:30,325 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.4 pTM=0.501 ipTM=0.26 tol=10.5 2024-12-06 06:31:51,131 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.8 pTM=0.505 ipTM=0.369 tol=10.5 2024-12-06 06:32:11,933 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.7 pTM=0.498 ipTM=0.244 tol=5.18 2024-12-06 06:32:32,706 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.2 pTM=0.502 ipTM=0.288 tol=5.26 2024-12-06 06:32:53,518 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.7 pTM=0.5 ipTM=0.273 tol=7.04 2024-12-06 06:33:14,330 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.5 pTM=0.5 ipTM=0.246 tol=7.17 2024-12-06 06:33:35,159 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.7 pTM=0.502 ipTM=0.365 tol=7.01 2024-12-06 06:33:55,962 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.2 pTM=0.498 ipTM=0.278 tol=4.57 2024-12-06 06:34:16,796 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.3 pTM=0.495 ipTM=0.307 tol=5.03 2024-12-06 06:34:37,603 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.1 pTM=0.497 ipTM=0.288 tol=7.97 2024-12-06 06:34:58,427 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.2 pTM=0.491 ipTM=0.266 tol=8.69 2024-12-06 06:35:19,238 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.7 pTM=0.498 ipTM=0.327 tol=6.05 2024-12-06 06:35:40,047 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.7 pTM=0.497 ipTM=0.254 tol=5.86 2024-12-06 06:36:00,844 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57 pTM=0.501 ipTM=0.278 tol=6.54 2024-12-06 06:36:21,666 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.8 pTM=0.501 ipTM=0.286 tol=6.18 2024-12-06 06:36:42,495 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.6 pTM=0.501 ipTM=0.262 tol=5.34 2024-12-06 06:37:03,303 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.4 pTM=0.501 ipTM=0.285 tol=6.94 2024-12-06 06:37:24,102 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.8 pTM=0.504 ipTM=0.317 tol=7.23 2024-12-06 06:37:24,102 alphafold2_multimer_v3_model_4_seed_000 took 645.2s (30 recycles) 2024-12-06 06:37:45,488 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.8 pTM=0.481 ipTM=0.376 2024-12-06 06:38:06,228 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.2 pTM=0.508 ipTM=0.414 tol=20.7 2024-12-06 06:38:26,964 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58 pTM=0.504 ipTM=0.354 tol=9.15 2024-12-06 06:38:47,762 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58 pTM=0.5 ipTM=0.258 tol=6.47 2024-12-06 06:39:08,566 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.9 pTM=0.501 ipTM=0.32 tol=6.82 2024-12-06 06:39:29,384 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.2 pTM=0.5 ipTM=0.311 tol=4.27 2024-12-06 06:39:50,167 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.1 pTM=0.5 ipTM=0.268 tol=4.6 2024-12-06 06:40:10,989 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58 pTM=0.501 ipTM=0.342 tol=5.77 2024-12-06 06:40:31,818 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.2 pTM=0.502 ipTM=0.334 tol=3.21 2024-12-06 06:40:52,664 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.1 pTM=0.5 ipTM=0.274 tol=2.34 2024-12-06 06:41:13,509 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.9 pTM=0.501 ipTM=0.329 tol=5.84 2024-12-06 06:41:34,376 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.3 pTM=0.501 ipTM=0.344 tol=2.75 2024-12-06 06:41:55,230 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.2 pTM=0.501 ipTM=0.265 tol=2.93 2024-12-06 06:42:16,075 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58 pTM=0.504 ipTM=0.434 tol=5.18 2024-12-06 06:42:36,937 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.4 pTM=0.501 ipTM=0.363 tol=5.64 2024-12-06 06:42:57,790 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.2 pTM=0.501 ipTM=0.266 tol=3.99 2024-12-06 06:43:18,655 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.1 pTM=0.502 ipTM=0.394 tol=3.2 2024-12-06 06:43:39,500 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.4 pTM=0.502 ipTM=0.366 tol=2.91 2024-12-06 06:44:00,337 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.2 pTM=0.501 ipTM=0.267 tol=3.88 2024-12-06 06:44:21,174 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.2 pTM=0.504 ipTM=0.425 tol=3.75 2024-12-06 06:44:42,036 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.3 pTM=0.503 ipTM=0.376 tol=2.88 2024-12-06 06:45:02,889 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.1 pTM=0.501 ipTM=0.268 tol=4.35 2024-12-06 06:45:23,744 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58 pTM=0.502 ipTM=0.393 tol=4.1 2024-12-06 06:45:44,585 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.3 pTM=0.504 ipTM=0.37 tol=2.7 2024-12-06 06:46:05,434 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.3 pTM=0.502 ipTM=0.292 tol=3.04 2024-12-06 06:46:26,256 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.2 pTM=0.503 ipTM=0.388 tol=3.18 2024-12-06 06:46:47,098 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.2 pTM=0.503 ipTM=0.358 tol=4.4 2024-12-06 06:47:07,946 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.3 pTM=0.502 ipTM=0.28 tol=5.12 2024-12-06 06:47:28,810 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.1 pTM=0.504 ipTM=0.425 tol=2.85 2024-12-06 06:47:49,690 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.4 pTM=0.503 ipTM=0.397 tol=4.54 2024-12-06 06:48:10,535 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.2 pTM=0.503 ipTM=0.273 tol=5.61 2024-12-06 06:48:10,536 alphafold2_multimer_v3_model_5_seed_000 took 645.8s (30 recycles) 2024-12-06 06:48:11,193 reranking models by 'multimer' metric 2024-12-06 06:48:14,781 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 06:49:29,116 Relaxation took 77.9s 2024-12-06 06:49:29,116 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.8 pTM=0.504 ipTM=0.317 2024-12-06 06:50:46,880 Relaxation took 77.8s 2024-12-06 06:50:46,880 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.7 pTM=0.506 ipTM=0.284 2024-12-06 06:52:06,917 Relaxation took 80.0s 2024-12-06 06:52:06,917 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.2 pTM=0.503 ipTM=0.273 2024-12-06 06:53:37,053 Relaxation took 90.1s 2024-12-06 06:53:37,053 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.4 pTM=0.486 ipTM=0.231 2024-12-06 06:55:21,158 Relaxation took 104.1s 2024-12-06 06:55:21,158 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.2 pTM=0.48 ipTM=0.214 2024-12-06 06:55:23,095 Done