2024-12-06 05:57:51,557 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 05:57:53,120 Running on GPU
2024-12-06 05:57:57,360 Found 6 citations for tools or databases
2024-12-06 05:57:57,360 Query 1/1: FBXW11_NFKB1 (length 1510)
2024-12-06 05:57:57,765 Sleeping for 5s. Reason: PENDING
2024-12-06 05:58:03,033 Sleeping for 9s. Reason: PENDING
2024-12-06 05:58:12,293 Sleeping for 9s. Reason: PENDING
2024-12-06 05:58:21,560 Sleeping for 8s. Reason: RUNNING
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2024-12-06 06:00:07,677 Sleeping for 5s. Reason: RUNNING
2024-12-06 06:00:12,939 Sleeping for 9s. Reason: RUNNING
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2024-12-06 06:00:31,466 Sleeping for 5s. Reason: RUNNING
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2024-12-06 06:00:42,980 Sleeping for 9s. Reason: RUNNING
2024-12-06 06:00:52,242 Sleeping for 8s. Reason: RUNNING
2024-12-06 06:01:00,506 Sleeping for 5s. Reason: RUNNING
2024-12-06 06:01:05,764 Sleeping for 6s. Reason: RUNNING
2024-12-06 06:01:12,018 Sleeping for 7s. Reason: RUNNING
2024-12-06 06:01:19,281 Sleeping for 10s. Reason: RUNNING
2024-12-06 06:01:29,540 Sleeping for 9s. Reason: RUNNING
2024-12-06 06:01:40,534 Sleeping for 10s. Reason: PENDING
2024-12-06 06:01:50,809 Sleeping for 9s. Reason: RUNNING
2024-12-06 06:02:00,082 Sleeping for 8s. Reason: RUNNING
2024-12-06 06:02:08,344 Sleeping for 9s. Reason: RUNNING
2024-12-06 06:02:17,605 Sleeping for 5s. Reason: RUNNING
2024-12-06 06:02:22,861 Sleeping for 7s. Reason: RUNNING
2024-12-06 06:02:30,128 Sleeping for 8s. Reason: RUNNING
2024-12-06 06:02:38,396 Sleeping for 10s. Reason: RUNNING
2024-12-06 06:02:48,665 Sleeping for 6s. Reason: RUNNING
2024-12-06 06:02:54,926 Sleeping for 5s. Reason: RUNNING
2024-12-06 06:03:00,178 Sleeping for 8s. Reason: RUNNING
2024-12-06 06:03:08,438 Sleeping for 6s. Reason: RUNNING
2024-12-06 06:03:14,699 Sleeping for 8s. Reason: RUNNING
2024-12-06 06:03:22,962 Sleeping for 7s. Reason: RUNNING
2024-12-06 06:03:30,217 Sleeping for 6s. Reason: RUNNING
2024-12-06 06:03:36,472 Sleeping for 9s. Reason: RUNNING
2024-12-06 06:03:45,739 Sleeping for 9s. Reason: RUNNING
2024-12-06 06:03:54,999 Sleeping for 5s. Reason: RUNNING
2024-12-06 06:04:00,257 Sleeping for 5s. Reason: RUNNING
2024-12-06 06:04:05,518 Sleeping for 7s. Reason: RUNNING
2024-12-06 06:04:19,176 Setting max_seq=508, max_extra_seq=2048
2024-12-06 06:09:08,064 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.3 pTM=0.409 ipTM=0.277
2024-12-06 06:10:10,441 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.2 pTM=0.448 ipTM=0.481 tol=19.8
2024-12-06 06:11:12,878 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.8 pTM=0.381 ipTM=0.238 tol=13.5
2024-12-06 06:12:15,243 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.8 pTM=0.405 ipTM=0.246 tol=7.1
2024-12-06 06:13:17,607 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.7 pTM=0.391 ipTM=0.227 tol=8.44
2024-12-06 06:14:20,016 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.6 pTM=0.379 ipTM=0.215 tol=6.84
2024-12-06 06:15:22,441 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.4 pTM=0.379 ipTM=0.217 tol=5.09
2024-12-06 06:16:24,867 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.4 pTM=0.38 ipTM=0.214 tol=4.54
2024-12-06 06:17:27,275 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.4 pTM=0.379 ipTM=0.216 tol=5.08
2024-12-06 06:18:29,695 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.1 pTM=0.377 ipTM=0.216 tol=4.3
2024-12-06 06:19:32,112 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.1 pTM=0.377 ipTM=0.215 tol=5.22
2024-12-06 06:20:34,526 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.2 pTM=0.377 ipTM=0.217 tol=2.29
2024-12-06 06:21:36,953 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.8 pTM=0.379 ipTM=0.213 tol=4.22
2024-12-06 06:22:39,378 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.1 pTM=0.38 ipTM=0.215 tol=4.21
2024-12-06 06:23:41,796 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.2 pTM=0.381 ipTM=0.214 tol=4.69
2024-12-06 06:24:44,196 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.3 pTM=0.383 ipTM=0.215 tol=4.16
2024-12-06 06:25:46,582 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67 pTM=0.38 ipTM=0.213 tol=4.85
2024-12-06 06:26:48,994 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67 pTM=0.38 ipTM=0.216 tol=2.87
2024-12-06 06:27:51,403 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.2 pTM=0.384 ipTM=0.215 tol=4.19
2024-12-06 06:28:53,820 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.2 pTM=0.381 ipTM=0.214 tol=3.01
2024-12-06 06:29:56,234 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.9 pTM=0.381 ipTM=0.213 tol=1.67
2024-12-06 06:30:58,648 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.4 pTM=0.383 ipTM=0.215 tol=1.68
2024-12-06 06:32:01,041 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.2 pTM=0.385 ipTM=0.215 tol=3.93
2024-12-06 06:33:03,468 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.1 pTM=0.388 ipTM=0.216 tol=2.57
2024-12-06 06:34:05,904 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.1 pTM=0.386 ipTM=0.216 tol=3.22
2024-12-06 06:35:08,340 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.1 pTM=0.389 ipTM=0.227 tol=3.56
2024-12-06 06:36:10,734 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67 pTM=0.401 ipTM=0.283 tol=4.9
2024-12-06 06:37:13,081 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.2 pTM=0.424 ipTM=0.365 tol=5.84
2024-12-06 06:38:15,428 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.1 pTM=0.423 ipTM=0.365 tol=3.26
2024-12-06 06:39:17,804 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.1 pTM=0.417 ipTM=0.354 tol=3.62
2024-12-06 06:40:20,170 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.1 pTM=0.426 ipTM=0.38 tol=7.24
2024-12-06 06:40:20,171 alphafold2_multimer_v3_model_1_seed_000 took 2139.9s (30 recycles)
2024-12-06 06:41:24,691 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.8 pTM=0.439 ipTM=0.408
2024-12-06 06:42:27,398 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65 pTM=0.475 ipTM=0.561 tol=15.9
2024-12-06 06:43:30,168 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.9 pTM=0.381 ipTM=0.253 tol=11.5
2024-12-06 06:44:32,971 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.3 pTM=0.38 ipTM=0.24 tol=9.99
2024-12-06 06:45:35,709 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.1 pTM=0.441 ipTM=0.455 tol=7.55
2024-12-06 06:46:38,524 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.1 pTM=0.38 ipTM=0.254 tol=7.68
2024-12-06 06:47:41,340 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.2 pTM=0.378 ipTM=0.236 tol=8.26
2024-12-06 06:48:44,158 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.2 pTM=0.377 ipTM=0.239 tol=4.14
2024-12-06 06:49:46,939 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.1 pTM=0.38 ipTM=0.253 tol=4.11
2024-12-06 06:50:49,705 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.2 pTM=0.377 ipTM=0.239 tol=3.82
2024-12-06 06:51:52,460 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.1 pTM=0.377 ipTM=0.238 tol=6.54
2024-12-06 06:52:55,262 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.2 pTM=0.378 ipTM=0.237 tol=6.14
2024-12-06 06:53:58,046 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.2 pTM=0.378 ipTM=0.239 tol=3.09
2024-12-06 06:55:00,822 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68 pTM=0.377 ipTM=0.233 tol=3.89
2024-12-06 06:56:03,609 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.3 pTM=0.421 ipTM=0.41 tol=6.41
2024-12-06 06:57:06,417 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.1 pTM=0.382 ipTM=0.258 tol=4.79
2024-12-06 06:58:09,185 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.7 pTM=0.378 ipTM=0.24 tol=3.44
2024-12-06 06:59:11,953 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.8 pTM=0.377 ipTM=0.236 tol=3.79
2024-12-06 07:00:14,678 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.9 pTM=0.414 ipTM=0.354 tol=17.7
2024-12-06 07:01:17,360 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.9 pTM=0.441 ipTM=0.438 tol=7.97
2024-12-06 07:02:20,029 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.4 pTM=0.399 ipTM=0.33 tol=10
2024-12-06 07:03:22,715 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.9 pTM=0.385 ipTM=0.259 tol=16.4
2024-12-06 07:04:25,442 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.2 pTM=0.379 ipTM=0.245 tol=11
2024-12-06 07:05:28,028 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.6 pTM=0.398 ipTM=0.341 tol=6.15
2024-12-06 07:06:30,576 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.8 pTM=0.401 ipTM=0.305 tol=5.91
2024-12-06 07:07:33,126 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69 pTM=0.409 ipTM=0.262 tol=5.25
2024-12-06 07:08:35,585 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70 pTM=0.465 ipTM=0.387 tol=6.35
2024-12-06 07:09:38,043 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.6 pTM=0.437 ipTM=0.333 tol=3.76
2024-12-06 07:10:40,498 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.5 pTM=0.44 ipTM=0.331 tol=5.81
2024-12-06 07:11:42,978 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.4 pTM=0.426 ipTM=0.352 tol=5.14
2024-12-06 07:12:45,477 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.4 pTM=0.424 ipTM=0.3 tol=3.34
2024-12-06 07:12:45,479 alphafold2_multimer_v3_model_2_seed_000 took 1943.4s (30 recycles)
2024-12-06 07:13:50,144 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.8 pTM=0.417 ipTM=0.282
2024-12-06 07:14:52,871 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.4 pTM=0.447 ipTM=0.41 tol=19.3
2024-12-06 07:15:55,617 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.2 pTM=0.397 ipTM=0.247 tol=12.5
2024-12-06 07:16:58,352 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.2 pTM=0.464 ipTM=0.508 tol=7.89
2024-12-06 07:18:01,089 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.2 pTM=0.403 ipTM=0.264 tol=8.76
2024-12-06 07:19:03,808 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.1 pTM=0.399 ipTM=0.25 tol=6.28
2024-12-06 07:20:06,508 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.1 pTM=0.395 ipTM=0.24 tol=6.95
2024-12-06 07:21:09,184 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.1 pTM=0.389 ipTM=0.234 tol=7.73
2024-12-06 07:22:11,697 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.3 pTM=0.433 ipTM=0.379 tol=6.41
2024-12-06 07:23:14,169 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.7 pTM=0.465 ipTM=0.364 tol=8.12
2024-12-06 07:24:16,585 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.2 pTM=0.482 ipTM=0.453 tol=4.21
2024-12-06 07:25:19,074 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.4 pTM=0.431 ipTM=0.341 tol=4.24
2024-12-06 07:26:21,583 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.5 pTM=0.412 ipTM=0.29 tol=4.35
2024-12-06 07:27:24,099 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.2 pTM=0.412 ipTM=0.307 tol=4.83
2024-12-06 07:28:26,606 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.5 pTM=0.414 ipTM=0.312 tol=4.12
2024-12-06 07:29:29,131 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.7 pTM=0.418 ipTM=0.324 tol=2.95
2024-12-06 07:30:31,660 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.2 pTM=0.41 ipTM=0.279 tol=2.62
2024-12-06 07:31:34,201 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.6 pTM=0.416 ipTM=0.319 tol=1.33
2024-12-06 07:32:36,723 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.4 pTM=0.414 ipTM=0.299 tol=1.62
2024-12-06 07:33:39,212 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.2 pTM=0.415 ipTM=0.316 tol=1.58
2024-12-06 07:34:41,671 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=69.1 pTM=0.417 ipTM=0.309 tol=1.58
2024-12-06 07:35:44,140 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.5 pTM=0.421 ipTM=0.319 tol=1.55
2024-12-06 07:36:46,615 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.4 pTM=0.422 ipTM=0.318 tol=1.17
2024-12-06 07:37:49,092 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.5 pTM=0.419 ipTM=0.295 tol=1.28
2024-12-06 07:38:51,556 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.5 pTM=0.423 ipTM=0.321 tol=1.56
2024-12-06 07:39:54,056 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.4 pTM=0.417 ipTM=0.29 tol=3.02
2024-12-06 07:40:56,559 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.4 pTM=0.417 ipTM=0.301 tol=2.99
2024-12-06 07:41:59,041 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.6 pTM=0.42 ipTM=0.317 tol=1.44
2024-12-06 07:43:01,521 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.6 pTM=0.419 ipTM=0.31 tol=1.37
2024-12-06 07:44:04,001 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.7 pTM=0.423 ipTM=0.322 tol=2.89
2024-12-06 07:45:06,462 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.5 pTM=0.423 ipTM=0.329 tol=3.4
2024-12-06 07:45:06,463 alphafold2_multimer_v3_model_3_seed_000 took 1939.0s (30 recycles)
2024-12-06 07:46:11,221 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.2 pTM=0.403 ipTM=0.286
2024-12-06 07:47:13,920 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.8 pTM=0.443 ipTM=0.427 tol=13.7
2024-12-06 07:48:16,527 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.8 pTM=0.406 ipTM=0.284 tol=11.5
2024-12-06 07:49:19,108 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.9 pTM=0.402 ipTM=0.254 tol=10.9
2024-12-06 07:50:21,602 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69 pTM=0.43 ipTM=0.245 tol=6.74
2024-12-06 07:51:24,058 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.1 pTM=0.427 ipTM=0.383 tol=5.9
2024-12-06 07:52:26,546 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.1 pTM=0.412 ipTM=0.327 tol=2.44
2024-12-06 07:53:29,039 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.1 pTM=0.407 ipTM=0.302 tol=2.96
2024-12-06 07:54:31,573 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.7 pTM=0.403 ipTM=0.302 tol=3.45
2024-12-06 07:55:34,071 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.5 pTM=0.405 ipTM=0.296 tol=1.94
2024-12-06 07:56:36,607 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.1 pTM=0.404 ipTM=0.316 tol=2.68
2024-12-06 07:57:39,102 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.4 pTM=0.4 ipTM=0.289 tol=2.4
2024-12-06 07:58:41,661 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.8 pTM=0.394 ipTM=0.27 tol=3.54
2024-12-06 07:59:44,215 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.4 pTM=0.393 ipTM=0.255 tol=3.11
2024-12-06 08:00:46,748 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.8 pTM=0.395 ipTM=0.304 tol=2.19
2024-12-06 08:01:49,269 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.2 pTM=0.397 ipTM=0.301 tol=3.03
2024-12-06 08:02:51,828 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.8 pTM=0.389 ipTM=0.232 tol=5
2024-12-06 08:03:54,383 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.6 pTM=0.39 ipTM=0.239 tol=3.26
2024-12-06 08:04:56,931 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.7 pTM=0.389 ipTM=0.255 tol=1.96
2024-12-06 08:05:59,483 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.6 pTM=0.389 ipTM=0.222 tol=3.88
2024-12-06 08:07:02,067 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.8 pTM=0.388 ipTM=0.215 tol=4.94
2024-12-06 08:08:04,651 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.6 pTM=0.388 ipTM=0.209 tol=4.9
2024-12-06 08:09:07,273 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69 pTM=0.392 ipTM=0.208 tol=3.19
2024-12-06 08:10:09,880 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.7 pTM=0.39 ipTM=0.209 tol=2.3
2024-12-06 08:11:12,492 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.6 pTM=0.388 ipTM=0.212 tol=3.8
2024-12-06 08:12:15,069 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.2 pTM=0.39 ipTM=0.226 tol=2.39
2024-12-06 08:13:17,657 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.4 pTM=0.396 ipTM=0.237 tol=1.64
2024-12-06 08:14:20,233 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.7 pTM=0.394 ipTM=0.22 tol=2.59
2024-12-06 08:15:22,797 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.6 pTM=0.393 ipTM=0.222 tol=1.88
2024-12-06 08:16:25,368 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.6 pTM=0.393 ipTM=0.22 tol=1.76
2024-12-06 08:17:27,974 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.4 pTM=0.389 ipTM=0.21 tol=2
2024-12-06 08:17:27,976 alphafold2_multimer_v3_model_4_seed_000 took 1939.6s (30 recycles)
2024-12-06 08:18:32,645 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.2 pTM=0.399 ipTM=0.266
2024-12-06 08:19:35,310 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.2 pTM=0.406 ipTM=0.3 tol=13.3
2024-12-06 08:20:37,962 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.7 pTM=0.397 ipTM=0.259 tol=7.7
2024-12-06 08:21:40,481 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.1 pTM=0.422 ipTM=0.324 tol=7.9
2024-12-06 08:22:42,951 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.1 pTM=0.4 ipTM=0.259 tol=7.02
2024-12-06 08:23:45,530 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.8 pTM=0.383 ipTM=0.22 tol=7.62
2024-12-06 08:24:48,059 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.4 pTM=0.413 ipTM=0.26 tol=7.52
2024-12-06 08:25:50,539 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.6 pTM=0.436 ipTM=0.345 tol=4.49
2024-12-06 08:26:53,004 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.4 pTM=0.422 ipTM=0.326 tol=5.74
2024-12-06 08:27:55,454 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.4 pTM=0.417 ipTM=0.297 tol=4.38
2024-12-06 08:28:57,898 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.6 pTM=0.415 ipTM=0.314 tol=3.32
2024-12-06 08:30:00,357 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.6 pTM=0.422 ipTM=0.311 tol=3.38
2024-12-06 08:31:02,759 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.5 pTM=0.433 ipTM=0.298 tol=2.83
2024-12-06 08:32:05,205 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.4 pTM=0.421 ipTM=0.287 tol=4.26
2024-12-06 08:33:07,609 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.9 pTM=0.44 ipTM=0.351 tol=4.03
2024-12-06 08:34:10,031 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69 pTM=0.433 ipTM=0.31 tol=3.03
2024-12-06 08:35:12,440 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.7 pTM=0.425 ipTM=0.319 tol=4.41
2024-12-06 08:36:14,865 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.9 pTM=0.434 ipTM=0.298 tol=3.05
2024-12-06 08:37:17,292 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.9 pTM=0.437 ipTM=0.321 tol=2.31
2024-12-06 08:38:19,737 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.8 pTM=0.431 ipTM=0.302 tol=5.12
2024-12-06 08:39:22,187 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.8 pTM=0.43 ipTM=0.316 tol=5.54
2024-12-06 08:40:24,631 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.1 pTM=0.437 ipTM=0.324 tol=4.57
2024-12-06 08:41:27,053 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.9 pTM=0.435 ipTM=0.326 tol=3.2
2024-12-06 08:42:29,492 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.1 pTM=0.429 ipTM=0.296 tol=1.82
2024-12-06 08:43:31,930 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.1 pTM=0.426 ipTM=0.323 tol=2.76
2024-12-06 08:44:34,354 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.8 pTM=0.428 ipTM=0.318 tol=3.24
2024-12-06 08:45:36,756 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.8 pTM=0.436 ipTM=0.303 tol=3.99
2024-12-06 08:46:39,164 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.1 pTM=0.436 ipTM=0.296 tol=3.34
2024-12-06 08:47:41,567 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.9 pTM=0.442 ipTM=0.35 tol=2.69
2024-12-06 08:48:43,959 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.8 pTM=0.445 ipTM=0.308 tol=2.72
2024-12-06 08:49:46,358 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.9 pTM=0.447 ipTM=0.313 tol=2.88
2024-12-06 08:49:46,360 alphafold2_multimer_v3_model_5_seed_000 took 1936.4s (30 recycles)
2024-12-06 08:49:48,300 reranking models by 'multimer' metric
2024-12-06 08:49:52,793 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 08:54:13,121 Relaxation took 264.8s
2024-12-06 08:54:13,121 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.1 pTM=0.426 ipTM=0.38
2024-12-06 08:57:17,143 Relaxation took 184.0s
2024-12-06 08:57:17,143 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.5 pTM=0.423 ipTM=0.329
2024-12-06 09:00:53,073 Relaxation took 215.9s
2024-12-06 09:00:53,073 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.9 pTM=0.447 ipTM=0.313
2024-12-06 09:04:19,998 Relaxation took 206.9s
2024-12-06 09:04:19,998 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.4 pTM=0.424 ipTM=0.3
2024-12-06 09:06:41,676 Relaxation took 141.7s
2024-12-06 09:06:41,676 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.4 pTM=0.389 ipTM=0.21
2024-12-06 09:06:45,953 Done