2024-12-06 06:05:36,384 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 06:05:36,723 Running on GPU 2024-12-06 06:05:41,268 Found 6 citations for tools or databases 2024-12-06 06:05:41,269 Query 1/1: FBXW11_PLEKHG5 (length 1548) 2024-12-06 06:05:51,262 Setting max_seq=508, max_extra_seq=2048 2024-12-06 06:09:16,189 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.2 pTM=0.379 ipTM=0.243 2024-12-06 06:10:28,498 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.8 pTM=0.406 ipTM=0.486 tol=19.8 2024-12-06 06:11:40,933 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.9 pTM=0.402 ipTM=0.478 tol=9.66 2024-12-06 06:12:53,403 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.6 pTM=0.396 ipTM=0.418 tol=8.6 2024-12-06 06:14:05,847 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.1 pTM=0.393 ipTM=0.394 tol=9.91 2024-12-06 06:15:18,304 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.2 pTM=0.39 ipTM=0.406 tol=6.16 2024-12-06 06:16:30,767 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.3 pTM=0.391 ipTM=0.403 tol=7.96 2024-12-06 06:17:43,196 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.3 pTM=0.384 ipTM=0.347 tol=9.34 2024-12-06 06:18:55,599 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.6 pTM=0.385 ipTM=0.357 tol=10.1 2024-12-06 06:20:08,003 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59 pTM=0.384 ipTM=0.354 tol=10.7 2024-12-06 06:21:20,419 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.5 pTM=0.392 ipTM=0.423 tol=6.91 2024-12-06 06:22:32,822 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.5 pTM=0.396 ipTM=0.465 tol=4.69 2024-12-06 06:23:45,250 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.3 pTM=0.397 ipTM=0.446 tol=8.29 2024-12-06 06:24:57,685 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.3 pTM=0.393 ipTM=0.369 tol=8.47 2024-12-06 06:26:10,121 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.1 pTM=0.392 ipTM=0.356 tol=3.62 2024-12-06 06:27:22,537 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.4 pTM=0.396 ipTM=0.424 tol=6.08 2024-12-06 06:28:34,991 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.5 pTM=0.393 ipTM=0.428 tol=5.82 2024-12-06 06:29:47,444 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.5 pTM=0.395 ipTM=0.444 tol=4.36 2024-12-06 06:30:59,861 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.4 pTM=0.396 ipTM=0.478 tol=4.09 2024-12-06 06:32:12,245 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.8 pTM=0.399 ipTM=0.485 tol=2.66 2024-12-06 06:33:24,629 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.6 pTM=0.397 ipTM=0.469 tol=3.8 2024-12-06 06:34:36,997 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.8 pTM=0.401 ipTM=0.476 tol=3.17 2024-12-06 06:35:49,397 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.7 pTM=0.399 ipTM=0.494 tol=3.19 2024-12-06 06:37:01,780 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.7 pTM=0.399 ipTM=0.487 tol=6.38 2024-12-06 06:38:14,094 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.7 pTM=0.401 ipTM=0.479 tol=5.18 2024-12-06 06:39:26,387 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.8 pTM=0.401 ipTM=0.499 tol=4.31 2024-12-06 06:40:38,754 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.7 pTM=0.399 ipTM=0.476 tol=6.58 2024-12-06 06:41:51,134 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.7 pTM=0.399 ipTM=0.467 tol=4.84 2024-12-06 06:43:03,526 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.5 pTM=0.398 ipTM=0.483 tol=5.03 2024-12-06 06:44:15,908 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.7 pTM=0.401 ipTM=0.509 tol=4.7 2024-12-06 06:45:28,303 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.7 pTM=0.398 ipTM=0.478 tol=2.65 2024-12-06 06:45:28,305 alphafold2_multimer_v3_model_1_seed_000 took 2371.6s (30 recycles) 2024-12-06 06:46:42,248 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59 pTM=0.4 ipTM=0.473 2024-12-06 06:47:54,802 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.3 pTM=0.401 ipTM=0.472 tol=15.4 2024-12-06 06:49:07,297 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.7 pTM=0.403 ipTM=0.461 tol=9.66 2024-12-06 06:50:19,831 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.8 pTM=0.401 ipTM=0.452 tol=4.63 2024-12-06 06:51:32,379 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.7 pTM=0.393 ipTM=0.396 tol=3.36 2024-12-06 06:52:44,906 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.9 pTM=0.395 ipTM=0.429 tol=4.04 2024-12-06 06:53:57,404 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.8 pTM=0.395 ipTM=0.41 tol=4.42 2024-12-06 06:55:09,906 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.7 pTM=0.39 ipTM=0.378 tol=3.23 2024-12-06 06:56:22,437 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.7 pTM=0.392 ipTM=0.402 tol=1.75 2024-12-06 06:57:35,025 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.7 pTM=0.391 ipTM=0.387 tol=2.23 2024-12-06 06:58:47,574 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.8 pTM=0.393 ipTM=0.394 tol=3.64 2024-12-06 07:00:00,107 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.7 pTM=0.392 ipTM=0.379 tol=2.57 2024-12-06 07:01:12,648 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.8 pTM=0.39 ipTM=0.362 tol=2.43 2024-12-06 07:02:25,191 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.8 pTM=0.391 ipTM=0.382 tol=2.32 2024-12-06 07:03:37,758 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.9 pTM=0.391 ipTM=0.376 tol=2.01 2024-12-06 07:04:50,313 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.6 pTM=0.389 ipTM=0.351 tol=2.01 2024-12-06 07:06:02,905 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.7 pTM=0.388 ipTM=0.337 tol=2.09 2024-12-06 07:07:15,479 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.6 pTM=0.39 ipTM=0.373 tol=2.05 2024-12-06 07:08:28,061 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.7 pTM=0.39 ipTM=0.369 tol=1.68 2024-12-06 07:09:40,619 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.8 pTM=0.39 ipTM=0.374 tol=3.4 2024-12-06 07:10:53,193 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.8 pTM=0.391 ipTM=0.363 tol=4.18 2024-12-06 07:12:05,759 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.8 pTM=0.391 ipTM=0.36 tol=3.92 2024-12-06 07:13:18,308 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.6 pTM=0.391 ipTM=0.36 tol=1.85 2024-12-06 07:14:30,852 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.8 pTM=0.392 ipTM=0.348 tol=1.49 2024-12-06 07:15:43,413 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61 pTM=0.392 ipTM=0.354 tol=1.81 2024-12-06 07:16:55,983 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.8 pTM=0.389 ipTM=0.334 tol=2.13 2024-12-06 07:18:08,495 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.9 pTM=0.393 ipTM=0.359 tol=3.14 2024-12-06 07:19:21,011 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.9 pTM=0.393 ipTM=0.364 tol=3.65 2024-12-06 07:20:33,527 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.7 pTM=0.39 ipTM=0.362 tol=3.21 2024-12-06 07:21:46,083 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.9 pTM=0.393 ipTM=0.394 tol=2.05 2024-12-06 07:22:58,628 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.1 pTM=0.395 ipTM=0.399 tol=2.69 2024-12-06 07:22:58,630 alphafold2_multimer_v3_model_2_seed_000 took 2248.9s (30 recycles) 2024-12-06 07:24:12,670 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.2 pTM=0.396 ipTM=0.359 2024-12-06 07:25:25,198 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.2 pTM=0.414 ipTM=0.476 tol=14.3 2024-12-06 07:26:37,747 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.7 pTM=0.42 ipTM=0.52 tol=9.48 2024-12-06 07:27:50,316 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.6 pTM=0.415 ipTM=0.532 tol=7.29 2024-12-06 07:29:02,906 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.8 pTM=0.417 ipTM=0.546 tol=6.46 2024-12-06 07:30:15,526 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.7 pTM=0.412 ipTM=0.505 tol=4.46 2024-12-06 07:31:28,178 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.8 pTM=0.414 ipTM=0.517 tol=5.61 2024-12-06 07:32:40,813 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.6 pTM=0.412 ipTM=0.521 tol=5.78 2024-12-06 07:33:53,481 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.8 pTM=0.414 ipTM=0.518 tol=5.27 2024-12-06 07:35:06,086 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.6 pTM=0.409 ipTM=0.507 tol=6.14 2024-12-06 07:36:18,787 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.9 pTM=0.412 ipTM=0.525 tol=8.11 2024-12-06 07:37:31,435 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.8 pTM=0.414 ipTM=0.535 tol=6.86 2024-12-06 07:38:44,102 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61 pTM=0.418 ipTM=0.546 tol=4.61 2024-12-06 07:39:56,672 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.7 pTM=0.415 ipTM=0.544 tol=5.83 2024-12-06 07:41:09,303 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.9 pTM=0.418 ipTM=0.549 tol=5.3 2024-12-06 07:42:21,897 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.5 pTM=0.412 ipTM=0.507 tol=5.42 2024-12-06 07:43:34,560 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.8 pTM=0.413 ipTM=0.512 tol=6.15 2024-12-06 07:44:47,192 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.7 pTM=0.414 ipTM=0.525 tol=7.11 2024-12-06 07:45:59,866 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.9 pTM=0.417 ipTM=0.552 tol=6.76 2024-12-06 07:47:12,488 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.7 pTM=0.417 ipTM=0.555 tol=6.75 2024-12-06 07:48:25,168 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.8 pTM=0.415 ipTM=0.528 tol=6.71 2024-12-06 07:49:37,757 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.5 pTM=0.414 ipTM=0.519 tol=6.86 2024-12-06 07:50:50,375 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.6 pTM=0.414 ipTM=0.513 tol=5.02 2024-12-06 07:52:02,960 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.4 pTM=0.411 ipTM=0.489 tol=4.22 2024-12-06 07:53:15,512 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.5 pTM=0.413 ipTM=0.509 tol=2.94 2024-12-06 07:54:28,062 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.5 pTM=0.412 ipTM=0.509 tol=3.28 2024-12-06 07:55:40,622 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.7 pTM=0.416 ipTM=0.527 tol=3.99 2024-12-06 07:56:53,260 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.6 pTM=0.411 ipTM=0.509 tol=3.48 2024-12-06 07:58:05,922 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.5 pTM=0.409 ipTM=0.503 tol=4.12 2024-12-06 07:59:18,499 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.5 pTM=0.409 ipTM=0.502 tol=3.45 2024-12-06 08:00:31,042 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.7 pTM=0.413 ipTM=0.517 tol=3.86 2024-12-06 08:00:31,043 alphafold2_multimer_v3_model_3_seed_000 took 2251.0s (30 recycles) 2024-12-06 08:01:45,088 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.9 pTM=0.384 ipTM=0.249 2024-12-06 08:02:57,597 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.4 pTM=0.419 ipTM=0.499 tol=21.9 2024-12-06 08:04:10,175 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.8 pTM=0.417 ipTM=0.517 tol=13.4 2024-12-06 08:05:22,831 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.7 pTM=0.415 ipTM=0.503 tol=9.18 2024-12-06 08:06:35,459 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.2 pTM=0.417 ipTM=0.519 tol=9.39 2024-12-06 08:07:48,097 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.3 pTM=0.417 ipTM=0.517 tol=6.81 2024-12-06 08:09:00,735 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.3 pTM=0.418 ipTM=0.518 tol=6.45 2024-12-06 08:10:13,387 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.3 pTM=0.416 ipTM=0.511 tol=5.81 2024-12-06 08:11:26,015 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.1 pTM=0.413 ipTM=0.502 tol=5.21 2024-12-06 08:12:38,649 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.2 pTM=0.414 ipTM=0.505 tol=5.01 2024-12-06 08:13:51,284 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.4 pTM=0.415 ipTM=0.488 tol=5.18 2024-12-06 08:15:03,890 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.2 pTM=0.413 ipTM=0.474 tol=7.25 2024-12-06 08:16:16,469 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.6 pTM=0.42 ipTM=0.49 tol=7.48 2024-12-06 08:17:29,046 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.2 pTM=0.416 ipTM=0.472 tol=8.5 2024-12-06 08:18:41,618 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.4 pTM=0.419 ipTM=0.502 tol=7.4 2024-12-06 08:19:54,178 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.3 pTM=0.419 ipTM=0.488 tol=4.09 2024-12-06 08:21:06,769 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.4 pTM=0.416 ipTM=0.458 tol=3.85 2024-12-06 08:22:19,350 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.5 pTM=0.419 ipTM=0.509 tol=3.71 2024-12-06 08:23:31,911 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.3 pTM=0.418 ipTM=0.492 tol=3.39 2024-12-06 08:24:44,504 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.4 pTM=0.418 ipTM=0.488 tol=8.77 2024-12-06 08:25:57,079 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.4 pTM=0.418 ipTM=0.55 tol=8.04 2024-12-06 08:27:09,660 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.4 pTM=0.419 ipTM=0.485 tol=3.64 2024-12-06 08:28:22,227 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.5 pTM=0.42 ipTM=0.559 tol=8.05 2024-12-06 08:29:34,788 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.3 pTM=0.417 ipTM=0.497 tol=7.62 2024-12-06 08:30:47,365 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.5 pTM=0.418 ipTM=0.552 tol=8.39 2024-12-06 08:31:59,905 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.2 pTM=0.417 ipTM=0.502 tol=8.39 2024-12-06 08:33:12,459 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.3 pTM=0.416 ipTM=0.533 tol=4.88 2024-12-06 08:34:24,996 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.4 pTM=0.418 ipTM=0.485 tol=4.13 2024-12-06 08:35:37,566 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.3 pTM=0.418 ipTM=0.549 tol=4.5 2024-12-06 08:36:50,087 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.6 pTM=0.425 ipTM=0.529 tol=4.61 2024-12-06 08:38:02,599 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.5 pTM=0.426 ipTM=0.542 tol=4.44 2024-12-06 08:38:02,600 alphafold2_multimer_v3_model_4_seed_000 took 2250.1s (30 recycles) 2024-12-06 08:39:16,567 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.6 pTM=0.402 ipTM=0.358 2024-12-06 08:40:29,086 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.3 pTM=0.421 ipTM=0.449 tol=14.2 2024-12-06 08:41:41,594 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.7 pTM=0.426 ipTM=0.479 tol=8.05 2024-12-06 08:42:54,120 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.6 pTM=0.419 ipTM=0.422 tol=6.02 2024-12-06 08:44:06,643 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.5 pTM=0.419 ipTM=0.514 tol=6.77 2024-12-06 08:45:19,155 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.4 pTM=0.419 ipTM=0.441 tol=4.85 2024-12-06 08:46:31,674 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.5 pTM=0.417 ipTM=0.513 tol=4.77 2024-12-06 08:47:44,243 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.4 pTM=0.414 ipTM=0.422 tol=8.29 2024-12-06 08:48:56,823 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.4 pTM=0.412 ipTM=0.416 tol=5.53 2024-12-06 08:50:09,372 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.5 pTM=0.415 ipTM=0.382 tol=6.81 2024-12-06 08:51:21,889 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.6 pTM=0.417 ipTM=0.389 tol=5.13 2024-12-06 08:52:34,453 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.6 pTM=0.417 ipTM=0.383 tol=6.13 2024-12-06 08:53:47,003 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.7 pTM=0.419 ipTM=0.402 tol=5 2024-12-06 08:54:59,533 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.8 pTM=0.421 ipTM=0.426 tol=5.19 2024-12-06 08:56:12,098 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60.8 pTM=0.422 ipTM=0.421 tol=3.25 2024-12-06 08:57:24,624 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.6 pTM=0.422 ipTM=0.423 tol=4.18 2024-12-06 08:58:37,136 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.8 pTM=0.423 ipTM=0.502 tol=6.57 2024-12-06 08:59:49,652 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.8 pTM=0.424 ipTM=0.501 tol=6.56 2024-12-06 09:01:02,179 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60.7 pTM=0.421 ipTM=0.49 tol=4.99 2024-12-06 09:02:14,696 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60.8 pTM=0.423 ipTM=0.428 tol=4.85 2024-12-06 09:03:27,196 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.9 pTM=0.423 ipTM=0.443 tol=2.6 2024-12-06 09:04:39,711 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.8 pTM=0.422 ipTM=0.423 tol=4.48 2024-12-06 09:05:52,228 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.9 pTM=0.424 ipTM=0.437 tol=2.88 2024-12-06 09:07:04,761 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60.8 pTM=0.421 ipTM=0.415 tol=2.79 2024-12-06 09:08:17,306 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61 pTM=0.423 ipTM=0.413 tol=3.25 2024-12-06 09:09:29,828 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60.8 pTM=0.421 ipTM=0.422 tol=5.18 2024-12-06 09:10:42,371 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.8 pTM=0.421 ipTM=0.414 tol=2.38 2024-12-06 09:11:54,917 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.8 pTM=0.42 ipTM=0.413 tol=4.46 2024-12-06 09:13:07,453 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=60.8 pTM=0.421 ipTM=0.41 tol=5.07 2024-12-06 09:14:19,961 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61 pTM=0.432 ipTM=0.499 tol=4.97 2024-12-06 09:15:32,458 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60.9 pTM=0.423 ipTM=0.43 tol=5.72 2024-12-06 09:15:32,459 alphafold2_multimer_v3_model_5_seed_000 took 2248.4s (30 recycles) 2024-12-06 09:15:33,867 reranking models by 'multimer' metric 2024-12-06 09:15:37,414 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 09:18:13,622 Relaxation took 159.8s 2024-12-06 09:18:13,622 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.5 pTM=0.426 ipTM=0.542 2024-12-06 09:21:40,703 Relaxation took 207.1s 2024-12-06 09:21:40,703 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.7 pTM=0.413 ipTM=0.517 2024-12-06 09:24:50,682 Relaxation took 190.0s 2024-12-06 09:24:50,682 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.7 pTM=0.398 ipTM=0.478 2024-12-06 09:27:19,271 Relaxation took 148.6s 2024-12-06 09:27:19,272 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60.9 pTM=0.423 ipTM=0.43 2024-12-06 09:30:08,812 Relaxation took 169.5s 2024-12-06 09:30:08,812 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.1 pTM=0.395 ipTM=0.399 2024-12-06 09:30:12,117 Done