2024-12-06 06:56:05,045 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 06:56:05,366 Running on GPU 2024-12-06 06:56:10,165 Found 6 citations for tools or databases 2024-12-06 06:56:10,165 Query 1/1: FBXW5_NDEL1 (length 911) 2024-12-06 06:56:10,460 Sleeping for 5s. Reason: PENDING 2024-12-06 06:56:15,716 Sleeping for 5s. Reason: RUNNING 2024-12-06 06:56:20,973 Sleeping for 7s. Reason: RUNNING 2024-12-06 06:56:28,232 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:56:36,484 Sleeping for 9s. Reason: RUNNING 2024-12-06 06:56:45,737 Sleeping for 10s. Reason: RUNNING 2024-12-06 06:56:55,998 Sleeping for 6s. Reason: RUNNING 2024-12-06 06:57:02,254 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:57:10,513 Sleeping for 9s. Reason: RUNNING 2024-12-06 06:57:19,771 Sleeping for 7s. Reason: RUNNING 2024-12-06 06:57:27,025 Sleeping for 6s. Reason: RUNNING 2024-12-06 06:57:33,278 Sleeping for 6s. Reason: RUNNING 2024-12-06 06:57:39,537 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:57:47,788 Sleeping for 7s. Reason: RUNNING 2024-12-06 06:57:55,049 Sleeping for 7s. Reason: RUNNING 2024-12-06 06:58:02,305 Sleeping for 7s. Reason: RUNNING 2024-12-06 06:58:09,555 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:58:17,812 Sleeping for 9s. Reason: RUNNING 2024-12-06 06:58:27,073 Sleeping for 6s. Reason: RUNNING 2024-12-06 06:58:34,738 Sleeping for 8s. Reason: PENDING 2024-12-06 06:58:43,001 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:58:51,259 Sleeping for 7s. Reason: RUNNING 2024-12-06 06:58:58,514 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:59:06,776 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:59:15,045 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:59:23,311 Sleeping for 6s. Reason: RUNNING 2024-12-06 06:59:29,574 Sleeping for 10s. Reason: RUNNING 2024-12-06 06:59:39,844 Sleeping for 5s. Reason: RUNNING 2024-12-06 06:59:45,102 Sleeping for 9s. Reason: RUNNING 2024-12-06 06:59:54,361 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:00:01,615 Sleeping for 8s. Reason: RUNNING 2024-12-06 07:00:12,178 Setting max_seq=508, max_extra_seq=2048 2024-12-06 07:03:05,330 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.2 pTM=0.574 ipTM=0.173 2024-12-06 07:03:22,642 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.7 pTM=0.593 ipTM=0.281 tol=18.1 2024-12-06 07:03:39,984 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.3 pTM=0.604 ipTM=0.21 tol=12.5 2024-12-06 07:03:57,364 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.3 pTM=0.608 ipTM=0.254 tol=10.2 2024-12-06 07:04:14,774 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67 pTM=0.604 ipTM=0.211 tol=7.52 2024-12-06 07:04:32,192 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.1 pTM=0.609 ipTM=0.22 tol=8.64 2024-12-06 07:04:49,647 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.3 pTM=0.61 ipTM=0.229 tol=5.48 2024-12-06 07:05:07,119 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.2 pTM=0.611 ipTM=0.21 tol=4.87 2024-12-06 07:05:24,646 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.6 pTM=0.604 ipTM=0.214 tol=8.09 2024-12-06 07:05:42,164 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.4 pTM=0.604 ipTM=0.213 tol=7.54 2024-12-06 07:05:59,690 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.8 pTM=0.605 ipTM=0.26 tol=8.52 2024-12-06 07:06:17,214 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.2 pTM=0.607 ipTM=0.207 tol=3.45 2024-12-06 07:06:34,746 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.2 pTM=0.609 ipTM=0.211 tol=9.51 2024-12-06 07:06:52,308 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67 pTM=0.608 ipTM=0.206 tol=12.4 2024-12-06 07:07:09,850 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.8 pTM=0.606 ipTM=0.214 tol=4.43 2024-12-06 07:07:27,388 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.8 pTM=0.61 ipTM=0.217 tol=9.37 2024-12-06 07:07:44,944 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.9 pTM=0.605 ipTM=0.216 tol=5 2024-12-06 07:08:02,490 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.2 pTM=0.615 ipTM=0.232 tol=9.52 2024-12-06 07:08:20,056 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.9 pTM=0.61 ipTM=0.208 tol=6.63 2024-12-06 07:08:37,614 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.8 pTM=0.606 ipTM=0.209 tol=8.59 2024-12-06 07:08:55,142 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.6 pTM=0.626 ipTM=0.449 tol=3.19 2024-12-06 07:09:12,672 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68 pTM=0.63 ipTM=0.423 tol=6.06 2024-12-06 07:09:30,199 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.1 pTM=0.629 ipTM=0.327 tol=2.56 2024-12-06 07:09:47,716 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68 pTM=0.621 ipTM=0.283 tol=3.37 2024-12-06 07:10:05,252 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.9 pTM=0.617 ipTM=0.232 tol=3.6 2024-12-06 07:10:22,788 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69 pTM=0.634 ipTM=0.566 tol=4.81 2024-12-06 07:10:40,307 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.4 pTM=0.626 ipTM=0.486 tol=6.4 2024-12-06 07:10:57,845 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.2 pTM=0.617 ipTM=0.281 tol=6.02 2024-12-06 07:11:15,382 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.7 pTM=0.617 ipTM=0.243 tol=8.8 2024-12-06 07:11:32,951 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68 pTM=0.611 ipTM=0.219 tol=7.26 2024-12-06 07:11:50,500 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.2 pTM=0.62 ipTM=0.24 tol=6.21 2024-12-06 07:11:50,501 alphafold2_multimer_v3_model_1_seed_000 took 693.4s (30 recycles) 2024-12-06 07:12:08,625 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.9 pTM=0.572 ipTM=0.131 2024-12-06 07:12:26,234 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66 pTM=0.583 ipTM=0.133 tol=8.21 2024-12-06 07:12:43,839 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.1 pTM=0.587 ipTM=0.135 tol=9.7 2024-12-06 07:13:01,439 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.1 pTM=0.586 ipTM=0.131 tol=7.5 2024-12-06 07:13:19,054 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.4 pTM=0.588 ipTM=0.136 tol=11.1 2024-12-06 07:13:36,709 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.9 pTM=0.585 ipTM=0.131 tol=9.56 2024-12-06 07:13:54,326 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.9 pTM=0.589 ipTM=0.129 tol=7.82 2024-12-06 07:14:11,950 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.2 pTM=0.588 ipTM=0.136 tol=7.32 2024-12-06 07:14:29,556 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67 pTM=0.593 ipTM=0.152 tol=13.1 2024-12-06 07:14:47,144 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.9 pTM=0.595 ipTM=0.165 tol=10.5 2024-12-06 07:15:04,726 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.2 pTM=0.595 ipTM=0.155 tol=12.2 2024-12-06 07:15:22,307 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.1 pTM=0.602 ipTM=0.202 tol=8.23 2024-12-06 07:15:39,912 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.9 pTM=0.592 ipTM=0.169 tol=18.3 2024-12-06 07:15:57,529 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.4 pTM=0.593 ipTM=0.173 tol=7.33 2024-12-06 07:16:15,126 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.4 pTM=0.594 ipTM=0.188 tol=3.63 2024-12-06 07:16:32,713 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.9 pTM=0.602 ipTM=0.241 tol=5.77 2024-12-06 07:16:50,313 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.3 pTM=0.595 ipTM=0.172 tol=3.03 2024-12-06 07:17:07,898 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.4 pTM=0.6 ipTM=0.219 tol=4.13 2024-12-06 07:17:25,466 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.2 pTM=0.605 ipTM=0.238 tol=6.17 2024-12-06 07:17:43,057 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.6 pTM=0.594 ipTM=0.164 tol=7.34 2024-12-06 07:18:00,625 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.8 pTM=0.607 ipTM=0.261 tol=5.71 2024-12-06 07:18:18,215 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.4 pTM=0.597 ipTM=0.169 tol=5.27 2024-12-06 07:18:35,797 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.6 pTM=0.602 ipTM=0.204 tol=6.43 2024-12-06 07:18:53,381 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.2 pTM=0.596 ipTM=0.168 tol=5.09 2024-12-06 07:19:10,956 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.8 pTM=0.599 ipTM=0.215 tol=4.13 2024-12-06 07:19:28,518 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.4 pTM=0.606 ipTM=0.233 tol=4.75 2024-12-06 07:19:46,107 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.2 pTM=0.595 ipTM=0.17 tol=3.31 2024-12-06 07:20:03,674 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.9 pTM=0.601 ipTM=0.223 tol=3.7 2024-12-06 07:20:21,270 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.2 pTM=0.593 ipTM=0.162 tol=4.61 2024-12-06 07:20:38,846 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.5 pTM=0.594 ipTM=0.184 tol=5.36 2024-12-06 07:20:56,414 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.1 pTM=0.607 ipTM=0.268 tol=7.48 2024-12-06 07:20:56,415 alphafold2_multimer_v3_model_2_seed_000 took 545.4s (30 recycles) 2024-12-06 07:21:14,572 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.6 pTM=0.567 ipTM=0.132 2024-12-06 07:21:32,246 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66 pTM=0.588 ipTM=0.181 tol=23.9 2024-12-06 07:21:49,903 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.5 pTM=0.596 ipTM=0.219 tol=8.7 2024-12-06 07:22:07,556 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.1 pTM=0.593 ipTM=0.179 tol=5.81 2024-12-06 07:22:25,208 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.6 pTM=0.604 ipTM=0.188 tol=6.25 2024-12-06 07:22:42,838 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.7 pTM=0.603 ipTM=0.196 tol=11.2 2024-12-06 07:23:00,498 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.6 pTM=0.592 ipTM=0.131 tol=13.7 2024-12-06 07:23:18,178 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.7 pTM=0.597 ipTM=0.14 tol=10.8 2024-12-06 07:23:35,826 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.2 pTM=0.594 ipTM=0.153 tol=24.5 2024-12-06 07:23:53,447 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.4 pTM=0.596 ipTM=0.172 tol=11.2 2024-12-06 07:24:11,074 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.9 pTM=0.597 ipTM=0.171 tol=5.61 2024-12-06 07:24:28,698 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.9 pTM=0.596 ipTM=0.171 tol=3.34 2024-12-06 07:24:46,334 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.4 pTM=0.594 ipTM=0.171 tol=9.55 2024-12-06 07:25:03,958 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.4 pTM=0.6 ipTM=0.181 tol=6.24 2024-12-06 07:25:21,583 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.6 pTM=0.597 ipTM=0.186 tol=5.39 2024-12-06 07:25:39,206 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.7 pTM=0.601 ipTM=0.188 tol=4.62 2024-12-06 07:25:56,857 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.2 pTM=0.598 ipTM=0.188 tol=9.66 2024-12-06 07:26:14,481 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.6 pTM=0.603 ipTM=0.238 tol=5.95 2024-12-06 07:26:32,130 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.8 pTM=0.597 ipTM=0.184 tol=5.8 2024-12-06 07:26:49,770 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.7 pTM=0.6 ipTM=0.2 tol=4.21 2024-12-06 07:27:07,402 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.9 pTM=0.598 ipTM=0.169 tol=4.43 2024-12-06 07:27:25,029 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68.9 pTM=0.604 ipTM=0.202 tol=5.47 2024-12-06 07:27:42,675 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.1 pTM=0.597 ipTM=0.168 tol=5.89 2024-12-06 07:28:00,300 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.9 pTM=0.6 ipTM=0.182 tol=7.34 2024-12-06 07:28:17,926 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68.2 pTM=0.593 ipTM=0.214 tol=8.4 2024-12-06 07:28:35,562 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.7 pTM=0.597 ipTM=0.156 tol=7.53 2024-12-06 07:28:53,195 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.2 pTM=0.596 ipTM=0.24 tol=11.6 2024-12-06 07:29:10,847 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.4 pTM=0.592 ipTM=0.142 tol=9.05 2024-12-06 07:29:28,465 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.8 pTM=0.593 ipTM=0.204 tol=5.44 2024-12-06 07:29:46,092 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68.5 pTM=0.596 ipTM=0.174 tol=11.7 2024-12-06 07:30:03,691 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=68.4 pTM=0.604 ipTM=0.322 tol=15.3 2024-12-06 07:30:03,692 alphafold2_multimer_v3_model_3_seed_000 took 546.8s (30 recycles) 2024-12-06 07:30:21,946 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.7 pTM=0.58 ipTM=0.135 2024-12-06 07:30:39,643 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.8 pTM=0.584 ipTM=0.143 tol=14.8 2024-12-06 07:30:57,311 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.6 pTM=0.594 ipTM=0.16 tol=7.28 2024-12-06 07:31:14,963 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.8 pTM=0.603 ipTM=0.203 tol=8.26 2024-12-06 07:31:32,659 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.6 pTM=0.606 ipTM=0.191 tol=8.73 2024-12-06 07:31:50,337 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.4 pTM=0.607 ipTM=0.186 tol=5.48 2024-12-06 07:32:08,024 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.9 pTM=0.606 ipTM=0.186 tol=9.13 2024-12-06 07:32:25,700 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.4 pTM=0.604 ipTM=0.195 tol=5.32 2024-12-06 07:32:43,415 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.8 pTM=0.605 ipTM=0.192 tol=10.3 2024-12-06 07:33:01,125 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.8 pTM=0.601 ipTM=0.225 tol=5.67 2024-12-06 07:33:18,821 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.6 pTM=0.601 ipTM=0.177 tol=6.66 2024-12-06 07:33:36,603 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.9 pTM=0.591 ipTM=0.133 tol=21.7 2024-12-06 07:33:54,303 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.4 pTM=0.599 ipTM=0.183 tol=19.7 2024-12-06 07:34:11,994 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.8 pTM=0.605 ipTM=0.185 tol=8.76 2024-12-06 07:34:29,666 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.5 pTM=0.602 ipTM=0.177 tol=5.5 2024-12-06 07:34:47,362 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.3 pTM=0.604 ipTM=0.186 tol=8.44 2024-12-06 07:35:05,073 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.1 pTM=0.605 ipTM=0.185 tol=8.72 2024-12-06 07:35:22,770 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65 pTM=0.605 ipTM=0.182 tol=6.84 2024-12-06 07:35:40,442 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65 pTM=0.606 ipTM=0.184 tol=7.91 2024-12-06 07:35:58,104 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.7 pTM=0.605 ipTM=0.183 tol=9.04 2024-12-06 07:36:15,776 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.1 pTM=0.604 ipTM=0.142 tol=16.7 2024-12-06 07:36:33,442 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.9 pTM=0.604 ipTM=0.191 tol=17.4 2024-12-06 07:36:51,152 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.1 pTM=0.606 ipTM=0.214 tol=7.97 2024-12-06 07:37:08,843 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.1 pTM=0.603 ipTM=0.187 tol=8.12 2024-12-06 07:37:26,535 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.4 pTM=0.602 ipTM=0.185 tol=8.51 2024-12-06 07:37:44,225 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.8 pTM=0.606 ipTM=0.18 tol=6.53 2024-12-06 07:38:01,893 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.2 pTM=0.605 ipTM=0.171 tol=10.6 2024-12-06 07:38:19,554 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.5 pTM=0.628 ipTM=0.46 tol=12.5 2024-12-06 07:38:37,203 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.6 pTM=0.613 ipTM=0.312 tol=9.5 2024-12-06 07:38:54,858 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.6 pTM=0.606 ipTM=0.208 tol=8.82 2024-12-06 07:39:12,501 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69 pTM=0.633 ipTM=0.659 tol=22.8 2024-12-06 07:39:12,502 alphafold2_multimer_v3_model_4_seed_000 took 548.3s (30 recycles) 2024-12-06 07:39:30,711 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.9 pTM=0.57 ipTM=0.152 2024-12-06 07:39:48,373 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.2 pTM=0.577 ipTM=0.148 tol=11.2 2024-12-06 07:40:06,034 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.5 pTM=0.576 ipTM=0.152 tol=12.8 2024-12-06 07:40:23,695 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67 pTM=0.584 ipTM=0.142 tol=10.2 2024-12-06 07:40:41,329 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.8 pTM=0.592 ipTM=0.169 tol=6.76 2024-12-06 07:40:58,929 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.6 pTM=0.591 ipTM=0.186 tol=2.96 2024-12-06 07:41:16,541 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.6 pTM=0.592 ipTM=0.165 tol=3.38 2024-12-06 07:41:34,168 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.3 pTM=0.591 ipTM=0.167 tol=14.1 2024-12-06 07:41:51,825 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.2 pTM=0.592 ipTM=0.167 tol=8.75 2024-12-06 07:42:09,479 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.2 pTM=0.601 ipTM=0.3 tol=12.6 2024-12-06 07:42:27,115 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.2 pTM=0.599 ipTM=0.237 tol=5.93 2024-12-06 07:42:44,752 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67 pTM=0.598 ipTM=0.247 tol=5.2 2024-12-06 07:43:02,337 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.2 pTM=0.618 ipTM=0.567 tol=17.1 2024-12-06 07:43:19,929 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70 pTM=0.623 ipTM=0.578 tol=5.86 2024-12-06 07:43:37,520 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.2 pTM=0.621 ipTM=0.567 tol=3.78 2024-12-06 07:43:55,114 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.1 pTM=0.621 ipTM=0.564 tol=2.66 2024-12-06 07:44:12,722 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.2 pTM=0.62 ipTM=0.568 tol=2.98 2024-12-06 07:44:30,325 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.8 pTM=0.618 ipTM=0.557 tol=5.12 2024-12-06 07:44:47,950 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.9 pTM=0.617 ipTM=0.561 tol=4.87 2024-12-06 07:45:05,568 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.7 pTM=0.619 ipTM=0.542 tol=4.54 2024-12-06 07:45:23,181 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.9 pTM=0.619 ipTM=0.561 tol=5.6 2024-12-06 07:45:40,782 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.9 pTM=0.622 ipTM=0.535 tol=4.41 2024-12-06 07:45:58,393 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.1 pTM=0.621 ipTM=0.573 tol=3.24 2024-12-06 07:46:15,973 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.1 pTM=0.619 ipTM=0.509 tol=11.3 2024-12-06 07:46:33,588 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.6 pTM=0.614 ipTM=0.522 tol=7.52 2024-12-06 07:46:51,194 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.1 pTM=0.616 ipTM=0.431 tol=8.95 2024-12-06 07:47:08,810 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.6 pTM=0.615 ipTM=0.511 tol=6.56 2024-12-06 07:47:26,399 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.6 pTM=0.619 ipTM=0.494 tol=7.09 2024-12-06 07:47:43,993 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.8 pTM=0.616 ipTM=0.533 tol=4.9 2024-12-06 07:48:01,598 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.1 pTM=0.614 ipTM=0.449 tol=10 2024-12-06 07:48:19,205 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.4 pTM=0.615 ipTM=0.507 tol=4.95 2024-12-06 07:48:19,206 alphafold2_multimer_v3_model_5_seed_000 took 546.2s (30 recycles) 2024-12-06 07:48:19,723 reranking models by 'multimer' metric 2024-12-06 07:48:21,103 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 07:49:37,983 Relaxation took 78.3s 2024-12-06 07:49:37,983 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69 pTM=0.633 ipTM=0.659 2024-12-06 07:50:35,657 Relaxation took 57.7s 2024-12-06 07:50:35,657 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.4 pTM=0.615 ipTM=0.507 2024-12-06 07:51:44,552 Relaxation took 68.9s 2024-12-06 07:51:44,552 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=68.4 pTM=0.604 ipTM=0.322 2024-12-06 07:53:18,132 Relaxation took 93.6s 2024-12-06 07:53:18,132 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.1 pTM=0.607 ipTM=0.268 2024-12-06 07:54:18,749 Relaxation took 60.6s 2024-12-06 07:54:18,749 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.2 pTM=0.62 ipTM=0.24 2024-12-06 07:54:20,471 Done