2024-12-06 06:58:11,704 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 06:58:12,023 Running on GPU 2024-12-06 06:58:16,639 Found 6 citations for tools or databases 2024-12-06 06:58:16,640 Query 1/1: FBXW5_ODF3L2 (length 855) 2024-12-06 06:58:16,963 Sleeping for 7s. Reason: PENDING 2024-12-06 06:58:24,222 Sleeping for 9s. Reason: RUNNING 2024-12-06 06:58:33,483 Sleeping for 6s. Reason: RUNNING 2024-12-06 06:58:39,746 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:58:48,002 Sleeping for 9s. Reason: RUNNING 2024-12-06 06:58:57,266 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:59:05,525 Sleeping for 5s. Reason: RUNNING 2024-12-06 06:59:10,784 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:59:19,048 Sleeping for 5s. Reason: RUNNING 2024-12-06 06:59:24,313 Sleeping for 7s. Reason: RUNNING 2024-12-06 06:59:31,582 Sleeping for 8s. Reason: RUNNING 2024-12-06 06:59:39,853 Sleeping for 6s. Reason: RUNNING 2024-12-06 06:59:46,108 Sleeping for 10s. Reason: RUNNING 2024-12-06 06:59:56,372 Sleeping for 8s. Reason: RUNNING 2024-12-06 07:00:04,628 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:00:11,891 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:00:22,148 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:00:31,414 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:00:40,677 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:00:49,935 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:00:57,187 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:01:08,838 Sleeping for 9s. Reason: PENDING 2024-12-06 07:01:18,102 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:01:24,365 Sleeping for 8s. Reason: RUNNING 2024-12-06 07:01:32,627 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:01:41,896 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:01:48,156 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:01:58,414 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:02:07,681 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:02:13,938 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:02:24,203 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:02:31,463 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:02:44,037 Setting max_seq=508, max_extra_seq=2048 2024-12-06 07:05:44,441 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58 pTM=0.603 ipTM=0.179 2024-12-06 07:06:00,681 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.7 pTM=0.616 ipTM=0.201 tol=15.3 2024-12-06 07:06:16,940 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.2 pTM=0.617 ipTM=0.396 tol=4.56 2024-12-06 07:06:33,245 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.2 pTM=0.622 ipTM=0.264 tol=3.21 2024-12-06 07:06:49,582 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.9 pTM=0.626 ipTM=0.315 tol=2.23 2024-12-06 07:07:05,940 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.1 pTM=0.63 ipTM=0.357 tol=2.54 2024-12-06 07:07:22,314 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.2 pTM=0.631 ipTM=0.351 tol=1.9 2024-12-06 07:07:38,716 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.7 pTM=0.638 ipTM=0.35 tol=2.21 2024-12-06 07:07:55,122 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.4 pTM=0.636 ipTM=0.253 tol=2.54 2024-12-06 07:08:11,542 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.3 pTM=0.639 ipTM=0.31 tol=1.81 2024-12-06 07:08:27,977 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.3 pTM=0.638 ipTM=0.261 tol=1.87 2024-12-06 07:08:44,415 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.3 pTM=0.64 ipTM=0.248 tol=2.69 2024-12-06 07:09:00,828 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.4 pTM=0.641 ipTM=0.239 tol=3.68 2024-12-06 07:09:17,250 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.5 pTM=0.642 ipTM=0.23 tol=4.02 2024-12-06 07:09:33,673 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.5 pTM=0.641 ipTM=0.252 tol=1.7 2024-12-06 07:09:50,104 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.8 pTM=0.647 ipTM=0.336 tol=1.25 2024-12-06 07:10:06,529 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.1 pTM=0.646 ipTM=0.4 tol=2.08 2024-12-06 07:10:22,966 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.9 pTM=0.645 ipTM=0.38 tol=1.13 2024-12-06 07:10:39,439 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.6 pTM=0.644 ipTM=0.314 tol=4.63 2024-12-06 07:10:55,907 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.6 pTM=0.646 ipTM=0.236 tol=5.53 2024-12-06 07:11:12,406 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.8 pTM=0.647 ipTM=0.292 tol=2.47 2024-12-06 07:11:28,882 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.5 pTM=0.644 ipTM=0.282 tol=3.05 2024-12-06 07:11:45,366 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.9 pTM=0.649 ipTM=0.257 tol=5.48 2024-12-06 07:12:01,858 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.9 pTM=0.648 ipTM=0.297 tol=3.61 2024-12-06 07:12:18,331 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.1 pTM=0.649 ipTM=0.256 tol=2.31 2024-12-06 07:12:34,783 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.3 pTM=0.652 ipTM=0.351 tol=1.39 2024-12-06 07:12:51,234 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.7 pTM=0.654 ipTM=0.354 tol=2.85 2024-12-06 07:13:07,702 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.3 pTM=0.652 ipTM=0.346 tol=7.05 2024-12-06 07:13:24,165 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.9 pTM=0.648 ipTM=0.238 tol=3.63 2024-12-06 07:13:40,606 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.2 pTM=0.651 ipTM=0.281 tol=5.42 2024-12-06 07:13:57,054 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.2 pTM=0.651 ipTM=0.252 tol=4 2024-12-06 07:13:57,055 alphafold2_multimer_v3_model_1_seed_000 took 667.9s (30 recycles) 2024-12-06 07:14:13,962 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.4 pTM=0.631 ipTM=0.323 2024-12-06 07:14:30,466 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60 pTM=0.623 ipTM=0.194 tol=10.1 2024-12-06 07:14:46,990 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.9 pTM=0.622 ipTM=0.18 tol=12.7 2024-12-06 07:15:03,536 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.1 pTM=0.634 ipTM=0.204 tol=8.51 2024-12-06 07:15:20,068 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.9 pTM=0.63 ipTM=0.21 tol=7.43 2024-12-06 07:15:36,606 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.9 pTM=0.63 ipTM=0.182 tol=4.25 2024-12-06 07:15:53,168 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.9 pTM=0.628 ipTM=0.161 tol=7.89 2024-12-06 07:16:09,739 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.2 pTM=0.64 ipTM=0.158 tol=5.88 2024-12-06 07:16:26,301 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.6 pTM=0.642 ipTM=0.173 tol=4.05 2024-12-06 07:16:42,845 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.3 pTM=0.645 ipTM=0.176 tol=6.16 2024-12-06 07:16:59,398 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.6 pTM=0.641 ipTM=0.167 tol=6.47 2024-12-06 07:17:15,958 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.4 pTM=0.645 ipTM=0.168 tol=4.16 2024-12-06 07:17:32,516 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.6 pTM=0.641 ipTM=0.156 tol=4.16 2024-12-06 07:17:49,083 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.6 pTM=0.646 ipTM=0.17 tol=4.58 2024-12-06 07:18:05,645 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.2 pTM=0.643 ipTM=0.158 tol=8.91 2024-12-06 07:18:22,202 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.5 pTM=0.646 ipTM=0.183 tol=6.03 2024-12-06 07:18:38,744 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.7 pTM=0.646 ipTM=0.172 tol=4.78 2024-12-06 07:18:55,290 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.8 pTM=0.648 ipTM=0.191 tol=5.18 2024-12-06 07:19:11,809 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.8 pTM=0.647 ipTM=0.216 tol=3.46 2024-12-06 07:19:28,372 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.7 pTM=0.644 ipTM=0.208 tol=4.99 2024-12-06 07:19:44,928 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.3 pTM=0.647 ipTM=0.263 tol=4.82 2024-12-06 07:20:01,474 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.6 pTM=0.649 ipTM=0.305 tol=6.43 2024-12-06 07:20:18,058 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.8 pTM=0.652 ipTM=0.422 tol=2.06 2024-12-06 07:20:34,639 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65 pTM=0.65 ipTM=0.448 tol=2.51 2024-12-06 07:20:51,192 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.6 pTM=0.654 ipTM=0.43 tol=11 2024-12-06 07:21:07,756 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.8 pTM=0.657 ipTM=0.425 tol=6.31 2024-12-06 07:21:24,312 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.9 pTM=0.658 ipTM=0.489 tol=3.56 2024-12-06 07:21:40,858 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.8 pTM=0.655 ipTM=0.431 tol=3.09 2024-12-06 07:21:57,418 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.5 pTM=0.653 ipTM=0.401 tol=5.98 2024-12-06 07:22:13,954 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.4 pTM=0.655 ipTM=0.377 tol=4.52 2024-12-06 07:22:30,490 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.4 pTM=0.658 ipTM=0.401 tol=5.16 2024-12-06 07:22:30,491 alphafold2_multimer_v3_model_2_seed_000 took 513.0s (30 recycles) 2024-12-06 07:22:47,519 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.9 pTM=0.611 ipTM=0.309 2024-12-06 07:23:04,117 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.2 pTM=0.608 ipTM=0.175 tol=13.3 2024-12-06 07:23:20,689 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.8 pTM=0.621 ipTM=0.179 tol=14 2024-12-06 07:23:37,246 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.9 pTM=0.635 ipTM=0.214 tol=5.03 2024-12-06 07:23:53,817 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.7 pTM=0.641 ipTM=0.216 tol=5.2 2024-12-06 07:24:10,377 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63 pTM=0.644 ipTM=0.196 tol=4.9 2024-12-06 07:24:26,944 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.1 pTM=0.643 ipTM=0.177 tol=8.65 2024-12-06 07:24:43,563 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.2 pTM=0.644 ipTM=0.162 tol=3.06 2024-12-06 07:25:00,156 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.3 pTM=0.644 ipTM=0.175 tol=3.05 2024-12-06 07:25:16,738 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.2 pTM=0.642 ipTM=0.185 tol=2.09 2024-12-06 07:25:33,324 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.4 pTM=0.645 ipTM=0.18 tol=3.29 2024-12-06 07:25:49,898 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.2 pTM=0.645 ipTM=0.203 tol=2.54 2024-12-06 07:26:06,466 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.1 pTM=0.645 ipTM=0.189 tol=2.48 2024-12-06 07:26:23,055 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.1 pTM=0.643 ipTM=0.193 tol=3.5 2024-12-06 07:26:39,632 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63 pTM=0.646 ipTM=0.221 tol=5.89 2024-12-06 07:26:56,201 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.9 pTM=0.641 ipTM=0.177 tol=6.48 2024-12-06 07:27:12,784 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.6 pTM=0.636 ipTM=0.163 tol=10.3 2024-12-06 07:27:29,393 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.7 pTM=0.635 ipTM=0.164 tol=9.98 2024-12-06 07:27:46,001 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.6 pTM=0.635 ipTM=0.186 tol=6.18 2024-12-06 07:28:02,609 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.1 pTM=0.643 ipTM=0.223 tol=8.86 2024-12-06 07:28:19,202 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.8 pTM=0.641 ipTM=0.174 tol=4.95 2024-12-06 07:28:35,788 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.9 pTM=0.64 ipTM=0.217 tol=6.71 2024-12-06 07:28:52,374 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.1 pTM=0.646 ipTM=0.23 tol=3 2024-12-06 07:29:08,959 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63 pTM=0.639 ipTM=0.182 tol=5.08 2024-12-06 07:29:25,543 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.1 pTM=0.646 ipTM=0.187 tol=4.07 2024-12-06 07:29:42,121 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.2 pTM=0.642 ipTM=0.182 tol=4.14 2024-12-06 07:29:58,709 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.2 pTM=0.646 ipTM=0.187 tol=2.99 2024-12-06 07:30:15,295 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.1 pTM=0.641 ipTM=0.189 tol=3.22 2024-12-06 07:30:31,890 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.9 pTM=0.641 ipTM=0.197 tol=3.95 2024-12-06 07:30:48,470 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.1 pTM=0.639 ipTM=0.179 tol=4.22 2024-12-06 07:31:05,043 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.8 pTM=0.639 ipTM=0.184 tol=5.35 2024-12-06 07:31:05,043 alphafold2_multimer_v3_model_3_seed_000 took 514.1s (30 recycles) 2024-12-06 07:31:22,105 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.8 pTM=0.619 ipTM=0.271 2024-12-06 07:31:38,665 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.5 pTM=0.604 ipTM=0.34 tol=18 2024-12-06 07:31:55,200 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.6 pTM=0.631 ipTM=0.508 tol=7.78 2024-12-06 07:32:11,731 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.4 pTM=0.635 ipTM=0.418 tol=6.18 2024-12-06 07:32:28,300 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62 pTM=0.636 ipTM=0.309 tol=6.37 2024-12-06 07:32:44,839 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62 pTM=0.631 ipTM=0.211 tol=5.74 2024-12-06 07:33:01,367 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.7 pTM=0.633 ipTM=0.236 tol=3.63 2024-12-06 07:33:17,904 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.1 pTM=0.637 ipTM=0.32 tol=6.96 2024-12-06 07:33:34,430 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.6 pTM=0.627 ipTM=0.169 tol=4.9 2024-12-06 07:33:50,959 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.8 pTM=0.634 ipTM=0.29 tol=6.14 2024-12-06 07:34:07,459 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.8 pTM=0.63 ipTM=0.195 tol=6.51 2024-12-06 07:34:23,976 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.8 pTM=0.631 ipTM=0.219 tol=5.78 2024-12-06 07:34:40,462 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.7 pTM=0.626 ipTM=0.223 tol=6.71 2024-12-06 07:34:56,962 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.8 pTM=0.63 ipTM=0.237 tol=3.28 2024-12-06 07:35:13,483 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62 pTM=0.627 ipTM=0.237 tol=3.55 2024-12-06 07:35:30,007 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62 pTM=0.626 ipTM=0.223 tol=3.68 2024-12-06 07:35:46,539 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62 pTM=0.625 ipTM=0.239 tol=2.62 2024-12-06 07:36:03,081 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.1 pTM=0.628 ipTM=0.27 tol=3.94 2024-12-06 07:36:19,628 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62 pTM=0.623 ipTM=0.228 tol=6.66 2024-12-06 07:36:36,166 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62 pTM=0.625 ipTM=0.227 tol=4.18 2024-12-06 07:36:52,727 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.2 pTM=0.624 ipTM=0.227 tol=4.02 2024-12-06 07:37:09,251 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.1 pTM=0.627 ipTM=0.227 tol=3.81 2024-12-06 07:37:25,790 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.2 pTM=0.627 ipTM=0.216 tol=3.15 2024-12-06 07:37:42,313 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.1 pTM=0.628 ipTM=0.226 tol=6.27 2024-12-06 07:37:58,867 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.1 pTM=0.624 ipTM=0.221 tol=3.54 2024-12-06 07:38:15,406 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62.2 pTM=0.627 ipTM=0.252 tol=2.79 2024-12-06 07:38:31,948 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.2 pTM=0.623 ipTM=0.218 tol=1.76 2024-12-06 07:38:48,481 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.1 pTM=0.626 ipTM=0.192 tol=2.68 2024-12-06 07:39:05,003 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.8 pTM=0.624 ipTM=0.178 tol=3.26 2024-12-06 07:39:21,538 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62 pTM=0.626 ipTM=0.243 tol=1.87 2024-12-06 07:39:38,084 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.8 pTM=0.62 ipTM=0.181 tol=4.55 2024-12-06 07:39:38,085 alphafold2_multimer_v3_model_4_seed_000 took 512.6s (30 recycles) 2024-12-06 07:39:55,105 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.5 pTM=0.625 ipTM=0.271 2024-12-06 07:40:11,664 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.9 pTM=0.624 ipTM=0.234 tol=13.7 2024-12-06 07:40:28,217 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.7 pTM=0.615 ipTM=0.185 tol=11.9 2024-12-06 07:40:44,786 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.4 pTM=0.62 ipTM=0.153 tol=7.95 2024-12-06 07:41:01,334 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.6 pTM=0.619 ipTM=0.147 tol=6.32 2024-12-06 07:41:17,876 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.8 pTM=0.624 ipTM=0.161 tol=4.55 2024-12-06 07:41:34,426 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.9 pTM=0.623 ipTM=0.157 tol=4.76 2024-12-06 07:41:50,995 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.4 pTM=0.625 ipTM=0.17 tol=4.21 2024-12-06 07:42:07,544 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.2 pTM=0.623 ipTM=0.168 tol=3.29 2024-12-06 07:42:24,083 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.3 pTM=0.624 ipTM=0.163 tol=3.29 2024-12-06 07:42:40,639 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.5 pTM=0.625 ipTM=0.171 tol=2.77 2024-12-06 07:42:57,208 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.3 pTM=0.623 ipTM=0.162 tol=3.89 2024-12-06 07:43:13,765 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.1 pTM=0.619 ipTM=0.153 tol=4.35 2024-12-06 07:43:30,322 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.2 pTM=0.62 ipTM=0.148 tol=4.98 2024-12-06 07:43:46,897 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61 pTM=0.615 ipTM=0.134 tol=7.14 2024-12-06 07:44:03,460 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.9 pTM=0.615 ipTM=0.141 tol=8.3 2024-12-06 07:44:20,029 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61 pTM=0.615 ipTM=0.209 tol=6.36 2024-12-06 07:44:36,601 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.2 pTM=0.618 ipTM=0.315 tol=5.17 2024-12-06 07:44:53,189 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61 pTM=0.619 ipTM=0.313 tol=3.15 2024-12-06 07:45:09,780 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61 pTM=0.617 ipTM=0.297 tol=5.73 2024-12-06 07:45:26,379 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.8 pTM=0.613 ipTM=0.206 tol=6.91 2024-12-06 07:45:42,981 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.7 pTM=0.613 ipTM=0.193 tol=6.48 2024-12-06 07:45:59,576 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.9 pTM=0.618 ipTM=0.272 tol=6.38 2024-12-06 07:46:16,161 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.1 pTM=0.62 ipTM=0.331 tol=5.55 2024-12-06 07:46:32,754 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=60.8 pTM=0.618 ipTM=0.254 tol=5.46 2024-12-06 07:46:49,342 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61 pTM=0.617 ipTM=0.323 tol=4.5 2024-12-06 07:47:05,936 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.9 pTM=0.615 ipTM=0.246 tol=5.1 2024-12-06 07:47:22,517 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61 pTM=0.617 ipTM=0.296 tol=3.85 2024-12-06 07:47:39,112 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=60.8 pTM=0.614 ipTM=0.287 tol=5.34 2024-12-06 07:47:55,710 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60.8 pTM=0.614 ipTM=0.25 tol=7.66 2024-12-06 07:48:12,306 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60.9 pTM=0.614 ipTM=0.332 tol=6.27 2024-12-06 07:48:12,307 alphafold2_multimer_v3_model_5_seed_000 took 513.8s (30 recycles) 2024-12-06 07:48:12,765 reranking models by 'multimer' metric 2024-12-06 07:48:16,225 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 07:49:23,475 Relaxation took 70.7s 2024-12-06 07:49:23,475 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.4 pTM=0.658 ipTM=0.401 2024-12-06 07:50:12,792 Relaxation took 49.3s 2024-12-06 07:50:12,792 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60.9 pTM=0.614 ipTM=0.332 2024-12-06 07:54:11,667 Relaxation took 238.9s 2024-12-06 07:54:11,667 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.2 pTM=0.651 ipTM=0.252 2024-12-06 07:55:10,856 Relaxation took 59.2s 2024-12-06 07:55:10,856 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.8 pTM=0.639 ipTM=0.184 2024-12-06 07:56:17,933 Relaxation took 67.1s 2024-12-06 07:56:17,933 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.8 pTM=0.62 ipTM=0.181 2024-12-06 07:56:19,701 Done