2024-12-06 06:59:56,847 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 06:59:57,157 Running on GPU
2024-12-06 07:00:01,090 Found 6 citations for tools or databases
2024-12-06 07:00:01,090 Query 1/1: FBXW5_PPP3R2 (length 736)
2024-12-06 07:00:01,386 Sleeping for 10s. Reason: PENDING
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2024-12-06 07:04:45,187 Setting max_seq=508, max_extra_seq=2048
2024-12-06 07:06:46,242 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.2 pTM=0.654 ipTM=0.181
2024-12-06 07:06:56,170 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.3 pTM=0.659 ipTM=0.138 tol=6.92
2024-12-06 07:07:06,094 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.4 pTM=0.658 ipTM=0.166 tol=18.1
2024-12-06 07:07:16,029 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71 pTM=0.671 ipTM=0.202 tol=1.01
2024-12-06 07:07:25,994 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.7 pTM=0.672 ipTM=0.196 tol=0.903
2024-12-06 07:07:35,947 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.1 pTM=0.673 ipTM=0.203 tol=1.58
2024-12-06 07:07:45,917 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=71.2 pTM=0.673 ipTM=0.201 tol=0.549
2024-12-06 07:07:55,895 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=71.8 pTM=0.679 ipTM=0.209 tol=1.44
2024-12-06 07:08:05,895 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=71.7 pTM=0.675 ipTM=0.2 tol=0.949
2024-12-06 07:08:15,883 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.3 pTM=0.675 ipTM=0.198 tol=1.29
2024-12-06 07:08:25,887 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.6 pTM=0.672 ipTM=0.193 tol=0.528
2024-12-06 07:08:35,890 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.5 pTM=0.674 ipTM=0.201 tol=0.743
2024-12-06 07:08:45,910 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.6 pTM=0.672 ipTM=0.196 tol=0.455
2024-12-06 07:08:45,911 alphafold2_multimer_v3_model_1_seed_000 took 235.6s (12 recycles)
2024-12-06 07:08:56,261 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.5 pTM=0.682 ipTM=0.21
2024-12-06 07:09:06,297 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.2 pTM=0.678 ipTM=0.209 tol=5.97
2024-12-06 07:09:16,335 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.7 pTM=0.684 ipTM=0.204 tol=1.86
2024-12-06 07:09:26,370 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.9 pTM=0.697 ipTM=0.21 tol=1.08
2024-12-06 07:09:36,400 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=75.9 pTM=0.707 ipTM=0.222 tol=0.965
2024-12-06 07:09:46,434 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.9 pTM=0.71 ipTM=0.216 tol=0.64
2024-12-06 07:09:56,476 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75.9 pTM=0.712 ipTM=0.21 tol=0.874
2024-12-06 07:10:06,526 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.8 pTM=0.722 ipTM=0.231 tol=0.884
2024-12-06 07:10:16,578 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.9 pTM=0.72 ipTM=0.219 tol=0.697
2024-12-06 07:10:26,630 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=76.5 pTM=0.718 ipTM=0.208 tol=0.76
2024-12-06 07:10:36,687 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.8 pTM=0.72 ipTM=0.211 tol=0.68
2024-12-06 07:10:46,748 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=76.6 pTM=0.72 ipTM=0.217 tol=0.457
2024-12-06 07:10:46,748 alphafold2_multimer_v3_model_2_seed_000 took 120.5s (11 recycles)
2024-12-06 07:10:57,154 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73 pTM=0.671 ipTM=0.157
2024-12-06 07:11:07,261 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.1 pTM=0.699 ipTM=0.241 tol=7.53
2024-12-06 07:11:17,371 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.4 pTM=0.703 ipTM=0.235 tol=4.49
2024-12-06 07:11:27,465 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.6 pTM=0.703 ipTM=0.224 tol=2.95
2024-12-06 07:11:37,557 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=75.5 pTM=0.714 ipTM=0.225 tol=2.22
2024-12-06 07:11:47,633 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=75.2 pTM=0.715 ipTM=0.234 tol=3.68
2024-12-06 07:11:57,702 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75 pTM=0.717 ipTM=0.239 tol=1.9
2024-12-06 07:12:07,780 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.3 pTM=0.715 ipTM=0.237 tol=2.13
2024-12-06 07:12:17,854 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75 pTM=0.715 ipTM=0.232 tol=1.4
2024-12-06 07:12:27,942 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.4 pTM=0.717 ipTM=0.236 tol=1.62
2024-12-06 07:12:38,027 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.3 pTM=0.715 ipTM=0.228 tol=2.23
2024-12-06 07:12:48,111 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=75.2 pTM=0.715 ipTM=0.238 tol=2.28
2024-12-06 07:12:58,187 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.9 pTM=0.714 ipTM=0.229 tol=1.98
2024-12-06 07:13:08,271 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=75.1 pTM=0.715 ipTM=0.237 tol=1.71
2024-12-06 07:13:18,352 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.8 pTM=0.715 ipTM=0.232 tol=1.06
2024-12-06 07:13:28,439 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=75 pTM=0.718 ipTM=0.248 tol=1.14
2024-12-06 07:13:38,532 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=75.2 pTM=0.715 ipTM=0.229 tol=1.04
2024-12-06 07:13:48,618 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=75.3 pTM=0.718 ipTM=0.246 tol=0.954
2024-12-06 07:13:58,709 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=75.2 pTM=0.717 ipTM=0.233 tol=1.51
2024-12-06 07:14:08,805 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=75.4 pTM=0.715 ipTM=0.235 tol=1.7
2024-12-06 07:14:18,891 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=75.2 pTM=0.714 ipTM=0.23 tol=0.757
2024-12-06 07:14:28,989 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=75.2 pTM=0.716 ipTM=0.239 tol=0.624
2024-12-06 07:14:39,076 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=75.4 pTM=0.714 ipTM=0.227 tol=1.46
2024-12-06 07:14:49,167 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=75.6 pTM=0.716 ipTM=0.237 tol=1.42
2024-12-06 07:14:59,247 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=75.1 pTM=0.713 ipTM=0.23 tol=1.03
2024-12-06 07:15:09,349 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=75.7 pTM=0.716 ipTM=0.238 tol=0.957
2024-12-06 07:15:19,433 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=75.5 pTM=0.716 ipTM=0.232 tol=1.16
2024-12-06 07:15:29,519 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=75.2 pTM=0.715 ipTM=0.24 tol=0.998
2024-12-06 07:15:39,601 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=75.2 pTM=0.714 ipTM=0.234 tol=0.949
2024-12-06 07:15:49,686 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=75.1 pTM=0.714 ipTM=0.237 tol=1.09
2024-12-06 07:15:59,767 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=75 pTM=0.714 ipTM=0.23 tol=1.27
2024-12-06 07:15:59,768 alphafold2_multimer_v3_model_3_seed_000 took 312.7s (30 recycles)
2024-12-06 07:16:10,191 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.3 pTM=0.684 ipTM=0.244
2024-12-06 07:16:20,294 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72 pTM=0.699 ipTM=0.219 tol=8.51
2024-12-06 07:16:30,408 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.2 pTM=0.706 ipTM=0.24 tol=6.77
2024-12-06 07:16:40,487 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.8 pTM=0.698 ipTM=0.223 tol=1.82
2024-12-06 07:16:50,589 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.3 pTM=0.697 ipTM=0.222 tol=0.925
2024-12-06 07:17:00,673 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.8 pTM=0.696 ipTM=0.229 tol=1.03
2024-12-06 07:17:10,750 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.1 pTM=0.696 ipTM=0.226 tol=1.32
2024-12-06 07:17:20,837 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.8 pTM=0.699 ipTM=0.239 tol=1.86
2024-12-06 07:17:30,925 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73 pTM=0.695 ipTM=0.222 tol=1.16
2024-12-06 07:17:41,015 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=73 pTM=0.697 ipTM=0.221 tol=0.719
2024-12-06 07:17:51,109 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.1 pTM=0.695 ipTM=0.224 tol=0.763
2024-12-06 07:18:01,190 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.9 pTM=0.695 ipTM=0.226 tol=0.842
2024-12-06 07:18:11,285 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=73 pTM=0.697 ipTM=0.223 tol=1.48
2024-12-06 07:18:21,369 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.6 pTM=0.697 ipTM=0.227 tol=2.02
2024-12-06 07:18:31,453 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.7 pTM=0.696 ipTM=0.227 tol=1.71
2024-12-06 07:18:41,531 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.7 pTM=0.697 ipTM=0.229 tol=0.726
2024-12-06 07:18:51,631 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.9 pTM=0.698 ipTM=0.227 tol=0.985
2024-12-06 07:19:01,717 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.1 pTM=0.698 ipTM=0.24 tol=1.55
2024-12-06 07:19:11,811 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.9 pTM=0.699 ipTM=0.229 tol=1.48
2024-12-06 07:19:21,902 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.8 pTM=0.698 ipTM=0.239 tol=1.5
2024-12-06 07:19:31,983 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.7 pTM=0.696 ipTM=0.226 tol=1.04
2024-12-06 07:19:42,072 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.7 pTM=0.698 ipTM=0.237 tol=0.977
2024-12-06 07:19:52,167 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.9 pTM=0.698 ipTM=0.225 tol=1.7
2024-12-06 07:20:02,251 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.9 pTM=0.699 ipTM=0.241 tol=1.59
2024-12-06 07:20:12,329 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.8 pTM=0.696 ipTM=0.224 tol=0.928
2024-12-06 07:20:22,436 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=73.1 pTM=0.697 ipTM=0.229 tol=1.11
2024-12-06 07:20:32,525 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=73 pTM=0.698 ipTM=0.227 tol=0.629
2024-12-06 07:20:42,609 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=72.8 pTM=0.699 ipTM=0.239 tol=0.656
2024-12-06 07:20:52,700 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.8 pTM=0.697 ipTM=0.223 tol=1.31
2024-12-06 07:21:02,788 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.6 pTM=0.695 ipTM=0.236 tol=1.33
2024-12-06 07:21:12,875 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.6 pTM=0.696 ipTM=0.228 tol=1.02
2024-12-06 07:21:12,876 alphafold2_multimer_v3_model_4_seed_000 took 312.8s (30 recycles)
2024-12-06 07:21:23,326 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.6 pTM=0.682 ipTM=0.207
2024-12-06 07:21:33,460 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.4 pTM=0.693 ipTM=0.237 tol=8.48
2024-12-06 07:21:43,577 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.2 pTM=0.702 ipTM=0.237 tol=2.85
2024-12-06 07:21:53,691 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.6 pTM=0.714 ipTM=0.247 tol=2.04
2024-12-06 07:22:03,817 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.4 pTM=0.718 ipTM=0.255 tol=2.21
2024-12-06 07:22:13,916 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.5 pTM=0.716 ipTM=0.255 tol=1.08
2024-12-06 07:22:24,043 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.1 pTM=0.719 ipTM=0.263 tol=1.45
2024-12-06 07:22:34,157 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.7 pTM=0.716 ipTM=0.253 tol=1.5
2024-12-06 07:22:44,274 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.6 pTM=0.72 ipTM=0.262 tol=0.573
2024-12-06 07:22:54,380 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.9 pTM=0.719 ipTM=0.253 tol=0.645
2024-12-06 07:23:04,491 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.8 pTM=0.722 ipTM=0.266 tol=0.737
2024-12-06 07:23:14,605 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.6 pTM=0.717 ipTM=0.256 tol=1.15
2024-12-06 07:23:24,702 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.8 pTM=0.719 ipTM=0.258 tol=0.968
2024-12-06 07:23:34,814 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.4 pTM=0.718 ipTM=0.254 tol=1.88
2024-12-06 07:23:44,907 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.9 pTM=0.719 ipTM=0.259 tol=2
2024-12-06 07:23:55,010 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.4 pTM=0.716 ipTM=0.247 tol=0.928
2024-12-06 07:24:05,122 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.6 pTM=0.72 ipTM=0.26 tol=1.25
2024-12-06 07:24:15,212 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.7 pTM=0.718 ipTM=0.256 tol=0.722
2024-12-06 07:24:25,318 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.9 pTM=0.723 ipTM=0.266 tol=0.467
2024-12-06 07:24:25,319 alphafold2_multimer_v3_model_5_seed_000 took 192.1s (18 recycles)
2024-12-06 07:24:25,660 reranking models by 'multimer' metric
2024-12-06 07:24:26,472 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 07:24:50,506 Relaxation took 24.8s
2024-12-06 07:24:50,507 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.9 pTM=0.723 ipTM=0.266
2024-12-06 07:25:46,406 Relaxation took 55.9s
2024-12-06 07:25:46,406 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=75 pTM=0.714 ipTM=0.23
2024-12-06 07:26:43,225 Relaxation took 56.8s
2024-12-06 07:26:43,225 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.6 pTM=0.696 ipTM=0.228
2024-12-06 07:27:32,889 Relaxation took 49.7s
2024-12-06 07:27:32,889 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.6 pTM=0.72 ipTM=0.217
2024-12-06 07:27:56,957 Relaxation took 24.1s
2024-12-06 07:27:56,958 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=71.6 pTM=0.672 ipTM=0.196
2024-12-06 07:27:58,388 Done