2024-12-06 07:34:20,579 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 07:34:20,953 Running on GPU 2024-12-06 07:34:24,882 Found 6 citations for tools or databases 2024-12-06 07:34:24,882 Query 1/1: FZR1_ANAPC16 (length 606) 2024-12-06 07:34:25,164 Sleeping for 9s. Reason: PENDING 2024-12-06 07:34:34,423 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:34:40,676 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:34:50,931 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:35:00,190 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:35:06,444 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:35:15,704 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:35:21,959 Sleeping for 8s. Reason: RUNNING 2024-12-06 07:35:30,217 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:35:39,475 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:35:46,734 Sleeping for 8s. Reason: RUNNING 2024-12-06 07:35:54,985 Sleeping for 8s. Reason: RUNNING 2024-12-06 07:36:03,243 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:36:09,503 Sleeping for 8s. Reason: RUNNING 2024-12-06 07:36:17,762 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:36:28,027 Sleeping for 5s. Reason: RUNNING 2024-12-06 07:36:35,036 Sleeping for 5s. Reason: PENDING 2024-12-06 07:36:40,290 Sleeping for 5s. Reason: RUNNING 2024-12-06 07:36:45,544 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:36:51,802 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:36:58,063 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:37:04,320 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:37:13,579 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:37:20,835 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:37:30,093 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:37:36,348 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:37:42,611 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:37:54,451 Setting max_seq=508, max_extra_seq=1805 2024-12-06 07:41:18,258 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.4 pTM=0.551 ipTM=0.175 2024-12-06 07:41:28,821 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.1 pTM=0.576 ipTM=0.335 tol=7.81 2024-12-06 07:41:39,385 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63 pTM=0.558 ipTM=0.198 tol=4.84 2024-12-06 07:41:49,953 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.4 pTM=0.571 ipTM=0.269 tol=5.24 2024-12-06 07:42:00,522 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.8 pTM=0.558 ipTM=0.2 tol=4.35 2024-12-06 07:42:11,096 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.5 pTM=0.571 ipTM=0.27 tol=4.6 2024-12-06 07:42:21,652 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.8 pTM=0.568 ipTM=0.27 tol=5.41 2024-12-06 07:42:32,211 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.5 pTM=0.573 ipTM=0.363 tol=7 2024-12-06 07:42:42,773 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.2 pTM=0.569 ipTM=0.376 tol=7.68 2024-12-06 07:42:53,310 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.2 pTM=0.567 ipTM=0.359 tol=4.77 2024-12-06 07:43:03,858 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.1 pTM=0.567 ipTM=0.366 tol=5.36 2024-12-06 07:43:14,400 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.4 pTM=0.568 ipTM=0.376 tol=1.67 2024-12-06 07:43:24,957 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.3 pTM=0.567 ipTM=0.375 tol=2.12 2024-12-06 07:43:35,510 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.6 pTM=0.569 ipTM=0.397 tol=2.22 2024-12-06 07:43:46,073 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.8 pTM=0.571 ipTM=0.418 tol=5.58 2024-12-06 07:43:56,649 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.4 pTM=0.573 ipTM=0.444 tol=2.43 2024-12-06 07:44:07,210 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.2 pTM=0.57 ipTM=0.432 tol=4.51 2024-12-06 07:44:17,767 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.4 pTM=0.569 ipTM=0.419 tol=4.71 2024-12-06 07:44:28,326 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.4 pTM=0.57 ipTM=0.421 tol=2.2 2024-12-06 07:44:38,880 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.6 pTM=0.57 ipTM=0.423 tol=6.24 2024-12-06 07:44:49,426 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.7 pTM=0.569 ipTM=0.418 tol=3.92 2024-12-06 07:44:59,981 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.6 pTM=0.569 ipTM=0.41 tol=4.37 2024-12-06 07:45:10,535 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.8 pTM=0.571 ipTM=0.438 tol=3.19 2024-12-06 07:45:21,092 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.8 pTM=0.571 ipTM=0.427 tol=2.33 2024-12-06 07:45:31,663 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.8 pTM=0.573 ipTM=0.446 tol=2.16 2024-12-06 07:45:42,225 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.9 pTM=0.573 ipTM=0.447 tol=2.36 2024-12-06 07:45:52,793 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.3 pTM=0.576 ipTM=0.468 tol=1.84 2024-12-06 07:46:03,351 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66 pTM=0.573 ipTM=0.447 tol=2.52 2024-12-06 07:46:13,925 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.2 pTM=0.574 ipTM=0.455 tol=1.82 2024-12-06 07:46:24,487 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66 pTM=0.573 ipTM=0.436 tol=2.83 2024-12-06 07:46:35,051 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.9 pTM=0.573 ipTM=0.44 tol=2.1 2024-12-06 07:46:35,051 alphafold2_multimer_v3_model_1_seed_000 took 515.0s (30 recycles) 2024-12-06 07:46:45,909 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.7 pTM=0.561 ipTM=0.207 2024-12-06 07:46:56,495 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.4 pTM=0.554 ipTM=0.162 tol=10.2 2024-12-06 07:47:07,085 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.2 pTM=0.555 ipTM=0.163 tol=6.93 2024-12-06 07:47:17,677 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.9 pTM=0.557 ipTM=0.175 tol=5.28 2024-12-06 07:47:28,293 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.3 pTM=0.555 ipTM=0.167 tol=3.99 2024-12-06 07:47:38,905 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.2 pTM=0.558 ipTM=0.179 tol=8.07 2024-12-06 07:47:49,515 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.9 pTM=0.556 ipTM=0.177 tol=4.97 2024-12-06 07:48:00,118 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63 pTM=0.558 ipTM=0.182 tol=2.56 2024-12-06 07:48:10,732 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.1 pTM=0.557 ipTM=0.177 tol=2.75 2024-12-06 07:48:21,323 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.2 pTM=0.558 ipTM=0.187 tol=2.94 2024-12-06 07:48:31,924 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.1 pTM=0.556 ipTM=0.173 tol=2.23 2024-12-06 07:48:42,495 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.2 pTM=0.561 ipTM=0.203 tol=3.35 2024-12-06 07:48:53,095 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.1 pTM=0.557 ipTM=0.177 tol=3.03 2024-12-06 07:49:03,687 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.1 pTM=0.56 ipTM=0.193 tol=1.97 2024-12-06 07:49:14,273 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.2 pTM=0.556 ipTM=0.174 tol=3.29 2024-12-06 07:49:24,863 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.7 pTM=0.564 ipTM=0.217 tol=2.15 2024-12-06 07:49:35,440 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.8 pTM=0.562 ipTM=0.207 tol=3.56 2024-12-06 07:49:46,024 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.9 pTM=0.568 ipTM=0.296 tol=3.09 2024-12-06 07:49:56,611 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.7 pTM=0.569 ipTM=0.287 tol=3 2024-12-06 07:50:07,184 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.9 pTM=0.572 ipTM=0.297 tol=3.28 2024-12-06 07:50:17,752 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.1 pTM=0.571 ipTM=0.293 tol=1.91 2024-12-06 07:50:28,325 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.8 pTM=0.568 ipTM=0.266 tol=1.52 2024-12-06 07:50:38,895 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.1 pTM=0.571 ipTM=0.299 tol=1.11 2024-12-06 07:50:49,472 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.2 pTM=0.574 ipTM=0.309 tol=1.82 2024-12-06 07:51:00,043 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66 pTM=0.572 ipTM=0.3 tol=1.21 2024-12-06 07:51:10,614 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.1 pTM=0.572 ipTM=0.311 tol=0.925 2024-12-06 07:51:21,178 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.1 pTM=0.57 ipTM=0.298 tol=1.07 2024-12-06 07:51:31,746 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.8 pTM=0.569 ipTM=0.263 tol=1.01 2024-12-06 07:51:42,317 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.9 pTM=0.569 ipTM=0.266 tol=1.02 2024-12-06 07:51:52,891 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.9 pTM=0.569 ipTM=0.261 tol=0.856 2024-12-06 07:52:03,462 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.9 pTM=0.569 ipTM=0.273 tol=1.21 2024-12-06 07:52:03,463 alphafold2_multimer_v3_model_2_seed_000 took 328.1s (30 recycles) 2024-12-06 07:52:14,357 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.4 pTM=0.556 ipTM=0.197 2024-12-06 07:52:24,952 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.7 pTM=0.57 ipTM=0.254 tol=7.53 2024-12-06 07:52:35,558 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.6 pTM=0.565 ipTM=0.23 tol=11.3 2024-12-06 07:52:46,166 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.2 pTM=0.569 ipTM=0.257 tol=10 2024-12-06 07:52:56,781 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63 pTM=0.565 ipTM=0.23 tol=4.03 2024-12-06 07:53:07,391 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.9 pTM=0.569 ipTM=0.252 tol=3.55 2024-12-06 07:53:17,995 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.8 pTM=0.566 ipTM=0.235 tol=2.29 2024-12-06 07:53:28,605 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.7 pTM=0.568 ipTM=0.248 tol=1.76 2024-12-06 07:53:39,204 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.9 pTM=0.568 ipTM=0.251 tol=1.72 2024-12-06 07:53:49,811 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.7 pTM=0.565 ipTM=0.232 tol=1.68 2024-12-06 07:54:00,423 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.7 pTM=0.567 ipTM=0.247 tol=2.36 2024-12-06 07:54:11,034 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.9 pTM=0.567 ipTM=0.247 tol=4.89 2024-12-06 07:54:21,646 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.8 pTM=0.566 ipTM=0.237 tol=2.3 2024-12-06 07:54:32,251 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.7 pTM=0.568 ipTM=0.253 tol=3.18 2024-12-06 07:54:42,847 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.9 pTM=0.566 ipTM=0.237 tol=1.88 2024-12-06 07:54:53,453 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.1 pTM=0.569 ipTM=0.257 tol=3.39 2024-12-06 07:55:04,064 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63 pTM=0.564 ipTM=0.226 tol=3.41 2024-12-06 07:55:14,663 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.9 pTM=0.568 ipTM=0.25 tol=4.5 2024-12-06 07:55:25,277 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63 pTM=0.567 ipTM=0.239 tol=6.38 2024-12-06 07:55:35,881 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.1 pTM=0.57 ipTM=0.26 tol=5.13 2024-12-06 07:55:46,471 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.6 pTM=0.565 ipTM=0.23 tol=5.93 2024-12-06 07:55:57,070 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.8 pTM=0.567 ipTM=0.25 tol=5.36 2024-12-06 07:56:07,663 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.9 pTM=0.565 ipTM=0.232 tol=4.3 2024-12-06 07:56:18,279 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.8 pTM=0.567 ipTM=0.244 tol=6.27 2024-12-06 07:56:28,884 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.8 pTM=0.566 ipTM=0.24 tol=3.86 2024-12-06 07:56:39,494 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.8 pTM=0.568 ipTM=0.252 tol=2.73 2024-12-06 07:56:50,103 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.9 pTM=0.566 ipTM=0.235 tol=4.08 2024-12-06 07:57:00,717 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.9 pTM=0.566 ipTM=0.239 tol=4.82 2024-12-06 07:57:11,318 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.9 pTM=0.567 ipTM=0.243 tol=1.69 2024-12-06 07:57:21,927 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.2 pTM=0.568 ipTM=0.244 tol=1.82 2024-12-06 07:57:32,545 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.9 pTM=0.566 ipTM=0.233 tol=1.52 2024-12-06 07:57:32,545 alphafold2_multimer_v3_model_3_seed_000 took 328.8s (30 recycles) 2024-12-06 07:57:43,437 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.9 pTM=0.562 ipTM=0.251 2024-12-06 07:57:54,046 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62 pTM=0.553 ipTM=0.184 tol=6.63 2024-12-06 07:58:04,640 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.9 pTM=0.557 ipTM=0.2 tol=4.81 2024-12-06 07:58:15,234 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.3 pTM=0.558 ipTM=0.205 tol=1.95 2024-12-06 07:58:25,826 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.5 pTM=0.559 ipTM=0.211 tol=1.75 2024-12-06 07:58:36,422 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.6 pTM=0.561 ipTM=0.217 tol=1.74 2024-12-06 07:58:47,021 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.4 pTM=0.559 ipTM=0.211 tol=1.48 2024-12-06 07:58:57,621 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.8 pTM=0.561 ipTM=0.224 tol=2.29 2024-12-06 07:59:08,216 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.8 pTM=0.558 ipTM=0.205 tol=1.2 2024-12-06 07:59:18,806 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.6 pTM=0.559 ipTM=0.214 tol=1.1 2024-12-06 07:59:29,400 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.5 pTM=0.557 ipTM=0.205 tol=1.27 2024-12-06 07:59:39,982 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.4 pTM=0.56 ipTM=0.219 tol=1.22 2024-12-06 07:59:50,591 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.8 pTM=0.56 ipTM=0.212 tol=1.73 2024-12-06 08:00:01,185 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.6 pTM=0.561 ipTM=0.219 tol=1.12 2024-12-06 08:00:11,768 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.7 pTM=0.558 ipTM=0.205 tol=1.55 2024-12-06 08:00:22,365 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.8 pTM=0.561 ipTM=0.219 tol=2.23 2024-12-06 08:00:32,958 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.8 pTM=0.558 ipTM=0.201 tol=3.2 2024-12-06 08:00:43,540 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.9 pTM=0.561 ipTM=0.223 tol=3.2 2024-12-06 08:00:54,137 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64 pTM=0.56 ipTM=0.211 tol=0.928 2024-12-06 08:01:04,739 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.9 pTM=0.562 ipTM=0.223 tol=2.06 2024-12-06 08:01:15,321 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.8 pTM=0.558 ipTM=0.208 tol=1.44 2024-12-06 08:01:25,895 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.8 pTM=0.561 ipTM=0.222 tol=2.15 2024-12-06 08:01:36,473 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.7 pTM=0.556 ipTM=0.199 tol=1.61 2024-12-06 08:01:47,068 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.8 pTM=0.561 ipTM=0.219 tol=1.91 2024-12-06 08:01:57,666 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.7 pTM=0.558 ipTM=0.204 tol=1.93 2024-12-06 08:02:08,252 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.6 pTM=0.562 ipTM=0.223 tol=1.74 2024-12-06 08:02:18,852 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.9 pTM=0.559 ipTM=0.208 tol=1.6 2024-12-06 08:02:29,447 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.8 pTM=0.561 ipTM=0.219 tol=1.51 2024-12-06 08:02:40,045 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.7 pTM=0.559 ipTM=0.212 tol=1.79 2024-12-06 08:02:50,647 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.8 pTM=0.562 ipTM=0.226 tol=1.84 2024-12-06 08:03:01,265 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.9 pTM=0.56 ipTM=0.211 tol=1.33 2024-12-06 08:03:01,266 alphafold2_multimer_v3_model_4_seed_000 took 328.4s (30 recycles) 2024-12-06 08:03:12,167 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.6 pTM=0.558 ipTM=0.2 2024-12-06 08:03:22,770 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62 pTM=0.562 ipTM=0.197 tol=8.18 2024-12-06 08:03:33,368 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63 pTM=0.568 ipTM=0.234 tol=3.91 2024-12-06 08:03:43,980 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.9 pTM=0.565 ipTM=0.214 tol=4.6 2024-12-06 08:03:54,591 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.1 pTM=0.567 ipTM=0.225 tol=1.75 2024-12-06 08:04:05,209 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.8 pTM=0.567 ipTM=0.222 tol=3.04 2024-12-06 08:04:15,831 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.2 pTM=0.569 ipTM=0.232 tol=1.97 2024-12-06 08:04:26,459 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63 pTM=0.569 ipTM=0.231 tol=2.01 2024-12-06 08:04:37,072 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.5 pTM=0.573 ipTM=0.257 tol=4.22 2024-12-06 08:04:47,673 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.9 pTM=0.567 ipTM=0.231 tol=3.05 2024-12-06 08:04:58,270 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.4 pTM=0.572 ipTM=0.248 tol=1.75 2024-12-06 08:05:08,861 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63 pTM=0.569 ipTM=0.238 tol=2.13 2024-12-06 08:05:19,494 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.4 pTM=0.572 ipTM=0.248 tol=2.45 2024-12-06 08:05:30,109 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.2 pTM=0.57 ipTM=0.244 tol=1.34 2024-12-06 08:05:40,688 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.6 pTM=0.571 ipTM=0.245 tol=1.76 2024-12-06 08:05:51,281 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.3 pTM=0.571 ipTM=0.245 tol=2.28 2024-12-06 08:06:01,895 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.5 pTM=0.57 ipTM=0.236 tol=2.48 2024-12-06 08:06:12,485 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.1 pTM=0.57 ipTM=0.241 tol=2.14 2024-12-06 08:06:23,074 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.5 pTM=0.572 ipTM=0.251 tol=2.17 2024-12-06 08:06:33,707 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63 pTM=0.57 ipTM=0.239 tol=2.02 2024-12-06 08:06:44,303 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.4 pTM=0.571 ipTM=0.245 tol=2.44 2024-12-06 08:06:54,892 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.9 pTM=0.569 ipTM=0.238 tol=2.44 2024-12-06 08:07:05,483 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.3 pTM=0.571 ipTM=0.247 tol=2.45 2024-12-06 08:07:16,081 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.1 pTM=0.57 ipTM=0.242 tol=1.55 2024-12-06 08:07:26,690 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.3 pTM=0.569 ipTM=0.238 tol=1.3 2024-12-06 08:07:37,304 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.1 pTM=0.571 ipTM=0.244 tol=1.16 2024-12-06 08:07:47,901 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.5 pTM=0.571 ipTM=0.243 tol=2.12 2024-12-06 08:07:58,490 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.9 pTM=0.568 ipTM=0.229 tol=1.59 2024-12-06 08:08:09,083 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.3 pTM=0.571 ipTM=0.243 tol=2.95 2024-12-06 08:08:19,711 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.1 pTM=0.569 ipTM=0.231 tol=1.2 2024-12-06 08:08:30,320 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.3 pTM=0.569 ipTM=0.23 tol=2.35 2024-12-06 08:08:30,320 alphafold2_multimer_v3_model_5_seed_000 took 328.7s (30 recycles) 2024-12-06 08:08:30,627 reranking models by 'multimer' metric 2024-12-06 08:08:31,472 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 08:09:17,512 Relaxation took 46.9s 2024-12-06 08:09:17,512 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.9 pTM=0.573 ipTM=0.44 2024-12-06 08:09:53,598 Relaxation took 36.1s 2024-12-06 08:09:53,598 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.9 pTM=0.569 ipTM=0.273 2024-12-06 08:10:39,687 Relaxation took 46.1s 2024-12-06 08:10:39,687 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.9 pTM=0.566 ipTM=0.233 2024-12-06 08:11:15,548 Relaxation took 35.9s 2024-12-06 08:11:15,548 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.3 pTM=0.569 ipTM=0.23 2024-12-06 08:11:55,743 Relaxation took 40.2s 2024-12-06 08:11:55,743 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.9 pTM=0.56 ipTM=0.211 2024-12-06 08:11:57,059 Done