2024-12-06 07:44:27,507 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 07:44:27,827 Running on GPU
2024-12-06 07:44:32,304 Found 6 citations for tools or databases
2024-12-06 07:44:32,304 Query 1/1: G2E3_SULF2 (length 1576)
2024-12-06 07:44:32,614 Sleeping for 7s. Reason: PENDING
2024-12-06 07:44:39,874 Sleeping for 8s. Reason: RUNNING
2024-12-06 07:44:48,130 Sleeping for 9s. Reason: RUNNING
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2024-12-06 07:45:10,909 Sleeping for 6s. Reason: RUNNING
2024-12-06 07:45:17,166 Sleeping for 6s. Reason: RUNNING
2024-12-06 07:45:23,430 Sleeping for 5s. Reason: RUNNING
2024-12-06 07:45:28,682 Sleeping for 8s. Reason: RUNNING
2024-12-06 07:45:36,945 Sleeping for 8s. Reason: RUNNING
2024-12-06 07:45:45,199 Sleeping for 10s. Reason: RUNNING
2024-12-06 07:45:55,461 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:46:04,720 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:46:13,984 Sleeping for 5s. Reason: RUNNING
2024-12-06 07:46:19,236 Sleeping for 10s. Reason: RUNNING
2024-12-06 07:46:29,493 Sleeping for 5s. Reason: RUNNING
2024-12-06 07:46:34,745 Sleeping for 7s. Reason: RUNNING
2024-12-06 07:46:42,002 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:46:51,261 Sleeping for 10s. Reason: RUNNING
2024-12-06 07:47:01,521 Sleeping for 6s. Reason: RUNNING
2024-12-06 07:47:07,777 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:47:17,038 Sleeping for 6s. Reason: RUNNING
2024-12-06 07:47:23,294 Sleeping for 8s. Reason: RUNNING
2024-12-06 07:47:31,554 Sleeping for 8s. Reason: RUNNING
2024-12-06 07:47:39,814 Sleeping for 6s. Reason: RUNNING
2024-12-06 07:47:46,080 Sleeping for 8s. Reason: RUNNING
2024-12-06 07:47:54,335 Sleeping for 5s. Reason: RUNNING
2024-12-06 07:47:59,589 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:48:08,848 Sleeping for 7s. Reason: RUNNING
2024-12-06 07:48:16,108 Sleeping for 10s. Reason: RUNNING
2024-12-06 07:48:26,366 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:48:35,622 Sleeping for 7s. Reason: RUNNING
2024-12-06 07:48:42,882 Sleeping for 5s. Reason: RUNNING
2024-12-06 07:48:48,132 Sleeping for 5s. Reason: RUNNING
2024-12-06 07:48:53,382 Sleeping for 10s. Reason: RUNNING
2024-12-06 07:49:03,646 Sleeping for 6s. Reason: RUNNING
2024-12-06 07:49:09,907 Sleeping for 8s. Reason: RUNNING
2024-12-06 07:49:20,034 Sleeping for 6s. Reason: PENDING
2024-12-06 07:49:26,294 Sleeping for 9s. Reason: PENDING
2024-12-06 07:49:35,553 Sleeping for 6s. Reason: PENDING
2024-12-06 07:49:41,805 Sleeping for 9s. Reason: PENDING
2024-12-06 07:49:51,070 Sleeping for 9s. Reason: PENDING
2024-12-06 07:50:00,328 Sleeping for 6s. Reason: PENDING
2024-12-06 07:50:06,584 Sleeping for 8s. Reason: PENDING
2024-12-06 07:50:14,841 Sleeping for 7s. Reason: RUNNING
2024-12-06 07:50:22,098 Sleeping for 7s. Reason: RUNNING
2024-12-06 07:50:29,357 Sleeping for 6s. Reason: RUNNING
2024-12-06 07:50:35,615 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:50:44,873 Sleeping for 10s. Reason: RUNNING
2024-12-06 07:50:55,133 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:51:04,398 Sleeping for 7s. Reason: RUNNING
2024-12-06 07:51:11,655 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:51:20,918 Sleeping for 7s. Reason: RUNNING
2024-12-06 07:51:28,173 Sleeping for 8s. Reason: RUNNING
2024-12-06 07:51:36,432 Sleeping for 10s. Reason: RUNNING
2024-12-06 07:51:46,693 Sleeping for 5s. Reason: RUNNING
2024-12-06 07:51:51,950 Sleeping for 10s. Reason: RUNNING
2024-12-06 07:52:02,217 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:52:11,477 Sleeping for 8s. Reason: RUNNING
2024-12-06 07:52:19,737 Sleeping for 10s. Reason: RUNNING
2024-12-06 07:52:29,994 Sleeping for 5s. Reason: RUNNING
2024-12-06 07:52:35,249 Sleeping for 10s. Reason: RUNNING
2024-12-06 07:52:45,512 Sleeping for 9s. Reason: RUNNING
2024-12-06 07:52:54,776 Sleeping for 6s. Reason: RUNNING
2024-12-06 07:53:05,688 Setting max_seq=508, max_extra_seq=2048
2024-12-06 07:56:18,209 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.2 pTM=0.429 ipTM=0.217
2024-12-06 07:57:32,281 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.8 pTM=0.426 ipTM=0.273 tol=11
2024-12-06 07:58:46,263 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.1 pTM=0.432 ipTM=0.24 tol=8.75
2024-12-06 08:00:00,249 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.8 pTM=0.433 ipTM=0.201 tol=5.23
2024-12-06 08:01:14,243 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.1 pTM=0.431 ipTM=0.212 tol=4.37
2024-12-06 08:02:28,276 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.1 pTM=0.432 ipTM=0.237 tol=3.12
2024-12-06 08:03:42,304 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.2 pTM=0.432 ipTM=0.226 tol=2.79
2024-12-06 08:04:56,319 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.6 pTM=0.436 ipTM=0.244 tol=2.29
2024-12-06 08:06:10,368 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.4 pTM=0.434 ipTM=0.222 tol=2.18
2024-12-06 08:07:24,407 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.4 pTM=0.437 ipTM=0.216 tol=3.01
2024-12-06 08:08:38,411 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66 pTM=0.432 ipTM=0.235 tol=3.12
2024-12-06 08:09:52,435 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.2 pTM=0.436 ipTM=0.221 tol=2.31
2024-12-06 08:11:06,471 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.3 pTM=0.435 ipTM=0.206 tol=2.1
2024-12-06 08:12:20,533 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.5 pTM=0.435 ipTM=0.215 tol=2.45
2024-12-06 08:13:34,560 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.2 pTM=0.432 ipTM=0.207 tol=3.71
2024-12-06 08:14:48,585 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.4 pTM=0.434 ipTM=0.217 tol=2.7
2024-12-06 08:16:02,642 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.3 pTM=0.432 ipTM=0.224 tol=3.78
2024-12-06 08:17:16,705 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.2 pTM=0.434 ipTM=0.239 tol=2.49
2024-12-06 08:18:30,777 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.4 pTM=0.434 ipTM=0.253 tol=2.02
2024-12-06 08:19:44,872 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.5 pTM=0.434 ipTM=0.238 tol=3.55
2024-12-06 08:20:58,960 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.6 pTM=0.433 ipTM=0.246 tol=2.44
2024-12-06 08:22:13,021 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.6 pTM=0.435 ipTM=0.258 tol=4.86
2024-12-06 08:23:27,093 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.5 pTM=0.434 ipTM=0.257 tol=3.38
2024-12-06 08:24:41,166 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.5 pTM=0.436 ipTM=0.239 tol=1.79
2024-12-06 08:25:55,217 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.2 pTM=0.434 ipTM=0.254 tol=3.68
2024-12-06 08:27:09,280 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.4 pTM=0.434 ipTM=0.256 tol=2.08
2024-12-06 08:28:23,331 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.6 pTM=0.432 ipTM=0.261 tol=2.87
2024-12-06 08:29:37,391 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.7 pTM=0.436 ipTM=0.267 tol=3.56
2024-12-06 08:30:51,450 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.3 pTM=0.433 ipTM=0.243 tol=2.13
2024-12-06 08:32:05,487 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.6 pTM=0.435 ipTM=0.244 tol=2.36
2024-12-06 08:33:19,517 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.4 pTM=0.434 ipTM=0.255 tol=2.31
2024-12-06 08:33:19,518 alphafold2_multimer_v3_model_1_seed_000 took 2408.8s (30 recycles)
2024-12-06 08:34:35,175 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.7 pTM=0.464 ipTM=0.327
2024-12-06 08:35:49,460 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.8 pTM=0.435 ipTM=0.216 tol=12
2024-12-06 08:37:03,664 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68 pTM=0.43 ipTM=0.204 tol=6.34
2024-12-06 08:38:17,919 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.5 pTM=0.431 ipTM=0.206 tol=4.62
2024-12-06 08:39:32,217 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.7 pTM=0.431 ipTM=0.205 tol=3.1
2024-12-06 08:40:46,502 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.7 pTM=0.431 ipTM=0.206 tol=2.3
2024-12-06 08:42:00,785 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.5 pTM=0.431 ipTM=0.211 tol=2.88
2024-12-06 08:43:15,053 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.8 pTM=0.43 ipTM=0.204 tol=3.05
2024-12-06 08:44:29,412 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.5 pTM=0.42 ipTM=0.187 tol=8.11
2024-12-06 08:45:43,715 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.7 pTM=0.424 ipTM=0.187 tol=5.12
2024-12-06 08:46:58,071 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.4 pTM=0.421 ipTM=0.187 tol=5.36
2024-12-06 08:48:12,410 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.6 pTM=0.424 ipTM=0.186 tol=3.98
2024-12-06 08:49:26,789 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.7 pTM=0.426 ipTM=0.189 tol=5.27
2024-12-06 08:50:41,092 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.5 pTM=0.423 ipTM=0.19 tol=2.94
2024-12-06 08:51:55,385 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.6 pTM=0.424 ipTM=0.188 tol=2.62
2024-12-06 08:53:09,717 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.6 pTM=0.427 ipTM=0.194 tol=3.89
2024-12-06 08:54:24,092 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.5 pTM=0.422 ipTM=0.187 tol=3.81
2024-12-06 08:55:38,412 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.5 pTM=0.426 ipTM=0.188 tol=2.98
2024-12-06 08:56:52,726 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.6 pTM=0.427 ipTM=0.196 tol=2.39
2024-12-06 08:58:07,000 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.6 pTM=0.427 ipTM=0.198 tol=2.16
2024-12-06 08:59:21,329 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.8 pTM=0.424 ipTM=0.191 tol=3.04
2024-12-06 09:00:35,667 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.8 pTM=0.424 ipTM=0.19 tol=1.44
2024-12-06 09:01:49,983 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.8 pTM=0.427 ipTM=0.198 tol=2.01
2024-12-06 09:03:04,287 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.8 pTM=0.426 ipTM=0.196 tol=1.67
2024-12-06 09:04:18,646 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.7 pTM=0.423 ipTM=0.199 tol=4.93
2024-12-06 09:05:32,985 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.6 pTM=0.425 ipTM=0.197 tol=3.57
2024-12-06 09:06:47,297 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.8 pTM=0.427 ipTM=0.201 tol=2.77
2024-12-06 09:08:01,593 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.9 pTM=0.429 ipTM=0.223 tol=3.06
2024-12-06 09:09:15,899 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.8 pTM=0.429 ipTM=0.204 tol=3.33
2024-12-06 09:10:30,190 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.8 pTM=0.429 ipTM=0.209 tol=2.56
2024-12-06 09:11:44,497 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.6 pTM=0.428 ipTM=0.218 tol=3.42
2024-12-06 09:11:44,498 alphafold2_multimer_v3_model_2_seed_000 took 2303.5s (30 recycles)
2024-12-06 09:13:00,423 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.9 pTM=0.42 ipTM=0.188
2024-12-06 09:14:14,832 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.3 pTM=0.426 ipTM=0.189 tol=11.7
2024-12-06 09:15:29,192 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.7 pTM=0.423 ipTM=0.185 tol=8.64
2024-12-06 09:16:43,518 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.2 pTM=0.429 ipTM=0.197 tol=7.35
2024-12-06 09:17:57,910 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.2 pTM=0.426 ipTM=0.19 tol=6.17
2024-12-06 09:19:12,272 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.3 pTM=0.426 ipTM=0.191 tol=6.18
2024-12-06 09:20:26,539 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.4 pTM=0.433 ipTM=0.21 tol=7.43
2024-12-06 09:21:40,838 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.6 pTM=0.426 ipTM=0.193 tol=6.49
2024-12-06 09:22:55,161 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.1 pTM=0.426 ipTM=0.194 tol=3.94
2024-12-06 09:24:09,479 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.5 pTM=0.426 ipTM=0.189 tol=3.63
2024-12-06 09:25:23,743 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.3 pTM=0.428 ipTM=0.194 tol=4.5
2024-12-06 09:26:37,999 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.5 pTM=0.426 ipTM=0.187 tol=4.31
2024-12-06 09:27:52,293 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.3 pTM=0.423 ipTM=0.188 tol=3.82
2024-12-06 09:29:06,533 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.6 pTM=0.424 ipTM=0.193 tol=3.83
2024-12-06 09:30:20,800 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.1 pTM=0.425 ipTM=0.189 tol=4.55
2024-12-06 09:31:35,118 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.4 pTM=0.426 ipTM=0.192 tol=6.47
2024-12-06 09:32:49,425 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.3 pTM=0.425 ipTM=0.192 tol=4.91
2024-12-06 09:34:03,775 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.3 pTM=0.428 ipTM=0.195 tol=3.6
2024-12-06 09:35:18,117 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.1 pTM=0.425 ipTM=0.185 tol=3.96
2024-12-06 09:36:32,445 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.2 pTM=0.426 ipTM=0.187 tol=3.46
2024-12-06 09:37:46,670 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.8 pTM=0.438 ipTM=0.22 tol=5.27
2024-12-06 09:39:00,856 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.4 pTM=0.432 ipTM=0.203 tol=3.07
2024-12-06 09:40:15,076 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.4 pTM=0.431 ipTM=0.191 tol=3.1
2024-12-06 09:41:29,388 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.5 pTM=0.428 ipTM=0.184 tol=3.75
2024-12-06 09:42:43,703 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.4 pTM=0.424 ipTM=0.184 tol=5.77
2024-12-06 09:43:57,988 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.4 pTM=0.428 ipTM=0.191 tol=5.52
2024-12-06 09:45:12,251 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.9 pTM=0.426 ipTM=0.189 tol=2.97
2024-12-06 09:46:26,522 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.2 pTM=0.428 ipTM=0.198 tol=3.81
2024-12-06 09:47:40,805 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.3 pTM=0.427 ipTM=0.191 tol=3.3
2024-12-06 09:48:55,103 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.4 pTM=0.429 ipTM=0.195 tol=2.14
2024-12-06 09:50:09,388 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.1 pTM=0.428 ipTM=0.188 tol=3.99
2024-12-06 09:50:09,389 alphafold2_multimer_v3_model_3_seed_000 took 2303.4s (30 recycles)
2024-12-06 09:51:25,166 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65 pTM=0.44 ipTM=0.218
2024-12-06 09:52:39,538 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.6 pTM=0.421 ipTM=0.182 tol=16.2
2024-12-06 09:53:53,873 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.4 pTM=0.423 ipTM=0.188 tol=10
2024-12-06 09:55:08,182 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.1 pTM=0.425 ipTM=0.197 tol=5.93
2024-12-06 09:56:22,480 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.2 pTM=0.426 ipTM=0.188 tol=2.96
2024-12-06 09:57:36,786 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.2 pTM=0.427 ipTM=0.195 tol=2.95
2024-12-06 09:58:51,048 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66 pTM=0.427 ipTM=0.192 tol=2.46
2024-12-06 10:00:05,300 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.2 pTM=0.427 ipTM=0.195 tol=5.99
2024-12-06 10:01:19,576 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.4 pTM=0.426 ipTM=0.191 tol=5.52
2024-12-06 10:02:33,830 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.2 pTM=0.427 ipTM=0.193 tol=1.96
2024-12-06 10:03:48,126 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.1 pTM=0.427 ipTM=0.196 tol=2.2
2024-12-06 10:05:02,441 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.3 pTM=0.428 ipTM=0.192 tol=2.14
2024-12-06 10:06:16,698 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.2 pTM=0.43 ipTM=0.195 tol=2.68
2024-12-06 10:07:31,011 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.4 pTM=0.427 ipTM=0.191 tol=2.3
2024-12-06 10:08:45,274 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.2 pTM=0.427 ipTM=0.195 tol=2.73
2024-12-06 10:09:59,510 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.1 pTM=0.428 ipTM=0.191 tol=3.25
2024-12-06 10:11:13,787 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.5 pTM=0.427 ipTM=0.201 tol=3.6
2024-12-06 10:12:28,053 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66 pTM=0.429 ipTM=0.191 tol=3.34
2024-12-06 10:13:42,341 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.1 pTM=0.432 ipTM=0.197 tol=2.61
2024-12-06 10:14:56,609 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.1 pTM=0.428 ipTM=0.191 tol=3.05
2024-12-06 10:16:10,899 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.6 pTM=0.429 ipTM=0.197 tol=2.83
2024-12-06 10:17:25,174 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.1 pTM=0.43 ipTM=0.195 tol=2.99
2024-12-06 10:18:39,474 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.4 pTM=0.429 ipTM=0.197 tol=3.74
2024-12-06 10:19:53,718 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.2 pTM=0.432 ipTM=0.198 tol=2.48
2024-12-06 10:21:07,984 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.9 pTM=0.428 ipTM=0.192 tol=4.97
2024-12-06 10:22:22,271 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.1 pTM=0.428 ipTM=0.196 tol=3.21
2024-12-06 10:23:36,571 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.1 pTM=0.427 ipTM=0.193 tol=4.6
2024-12-06 10:24:50,879 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.2 pTM=0.427 ipTM=0.193 tol=4.62
2024-12-06 10:26:05,174 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.1 pTM=0.428 ipTM=0.196 tol=3.62
2024-12-06 10:27:19,463 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.2 pTM=0.429 ipTM=0.195 tol=2.7
2024-12-06 10:28:33,769 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.1 pTM=0.427 ipTM=0.194 tol=3.77
2024-12-06 10:28:33,770 alphafold2_multimer_v3_model_4_seed_000 took 2302.9s (30 recycles)
2024-12-06 10:29:49,550 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.4 pTM=0.425 ipTM=0.199
2024-12-06 10:31:03,906 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.3 pTM=0.425 ipTM=0.193 tol=12.6
2024-12-06 10:32:18,153 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.4 pTM=0.427 ipTM=0.198 tol=6.93
2024-12-06 10:33:32,388 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.9 pTM=0.429 ipTM=0.196 tol=4.59
2024-12-06 10:34:46,677 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67 pTM=0.426 ipTM=0.197 tol=3.51
2024-12-06 10:36:00,931 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.2 pTM=0.426 ipTM=0.196 tol=4.8
2024-12-06 10:37:15,177 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.1 pTM=0.429 ipTM=0.195 tol=5.11
2024-12-06 10:38:29,443 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.2 pTM=0.427 ipTM=0.191 tol=2.64
2024-12-06 10:39:43,688 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.2 pTM=0.424 ipTM=0.189 tol=2.17
2024-12-06 10:40:57,961 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.3 pTM=0.427 ipTM=0.191 tol=1.75
2024-12-06 10:42:12,218 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.2 pTM=0.426 ipTM=0.191 tol=2.2
2024-12-06 10:43:26,490 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.3 pTM=0.428 ipTM=0.187 tol=2.19
2024-12-06 10:44:40,766 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.1 pTM=0.424 ipTM=0.188 tol=2.29
2024-12-06 10:45:55,037 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.4 pTM=0.427 ipTM=0.189 tol=2.03
2024-12-06 10:47:09,294 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.3 pTM=0.424 ipTM=0.188 tol=1.93
2024-12-06 10:48:23,578 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.2 pTM=0.426 ipTM=0.191 tol=2.29
2024-12-06 10:49:37,808 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.4 pTM=0.427 ipTM=0.19 tol=2.61
2024-12-06 10:50:52,071 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.1 pTM=0.429 ipTM=0.193 tol=3.22
2024-12-06 10:52:06,308 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.4 pTM=0.427 ipTM=0.189 tol=1.85
2024-12-06 10:53:20,545 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.1 pTM=0.426 ipTM=0.188 tol=2.8
2024-12-06 10:54:34,801 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.2 pTM=0.426 ipTM=0.189 tol=3.35
2024-12-06 10:55:49,052 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.9 pTM=0.426 ipTM=0.193 tol=2.89
2024-12-06 10:57:03,328 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.1 pTM=0.428 ipTM=0.193 tol=3.34
2024-12-06 10:58:17,591 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67 pTM=0.428 ipTM=0.193 tol=2.77
2024-12-06 10:59:31,844 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.1 pTM=0.424 ipTM=0.19 tol=2.36
2024-12-06 11:00:46,138 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67 pTM=0.427 ipTM=0.194 tol=1.98
2024-12-06 11:02:00,409 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.1 pTM=0.426 ipTM=0.192 tol=2.48
2024-12-06 11:03:14,691 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.2 pTM=0.428 ipTM=0.195 tol=2.75
2024-12-06 11:04:28,960 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.2 pTM=0.429 ipTM=0.196 tol=3.68
2024-12-06 11:05:43,234 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.1 pTM=0.428 ipTM=0.195 tol=3.21
2024-12-06 11:06:57,470 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.1 pTM=0.427 ipTM=0.195 tol=2.46
2024-12-06 11:06:57,471 alphafold2_multimer_v3_model_5_seed_000 took 2302.2s (30 recycles)
2024-12-06 11:06:58,941 reranking models by 'multimer' metric
2024-12-06 11:07:02,802 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 11:10:18,849 Relaxation took 199.9s
2024-12-06 11:10:18,849 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.4 pTM=0.434 ipTM=0.255
2024-12-06 11:13:39,399 Relaxation took 200.5s
2024-12-06 11:13:39,399 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.6 pTM=0.428 ipTM=0.218
2024-12-06 11:17:23,996 Relaxation took 224.6s
2024-12-06 11:17:23,996 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.1 pTM=0.427 ipTM=0.195
2024-12-06 11:22:14,514 Relaxation took 290.5s
2024-12-06 11:22:14,514 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.1 pTM=0.427 ipTM=0.194
2024-12-06 11:26:41,115 Relaxation took 266.6s
2024-12-06 11:26:41,115 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.1 pTM=0.428 ipTM=0.188
2024-12-06 11:26:44,585 Done