2024-12-06 07:54:55,525 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 07:54:55,846 Running on GPU 2024-12-06 07:54:59,171 Found 6 citations for tools or databases 2024-12-06 07:54:59,171 Query 1/1: GAN_BAD (length 765) 2024-12-06 07:54:59,460 Sleeping for 7s. Reason: PENDING 2024-12-06 07:55:06,724 Sleeping for 8s. Reason: RUNNING 2024-12-06 07:55:14,984 Sleeping for 8s. Reason: RUNNING 2024-12-06 07:55:23,241 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:55:33,502 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:55:39,765 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:55:47,022 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:55:57,279 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:56:07,549 Sleeping for 5s. Reason: RUNNING 2024-12-06 07:56:12,798 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:56:20,057 Sleeping for 5s. Reason: RUNNING 2024-12-06 07:56:25,317 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:56:34,576 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:56:46,137 Sleeping for 10s. Reason: PENDING 2024-12-06 07:56:56,395 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:57:03,649 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:57:10,903 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:57:18,169 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:57:28,432 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:57:34,688 Sleeping for 9s. Reason: RUNNING 2024-12-06 07:57:43,944 Sleeping for 8s. Reason: RUNNING 2024-12-06 07:57:52,204 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:57:58,458 Sleeping for 6s. Reason: RUNNING 2024-12-06 07:58:04,714 Sleeping for 10s. Reason: RUNNING 2024-12-06 07:58:14,974 Sleeping for 7s. Reason: RUNNING 2024-12-06 07:58:23,535 Setting max_seq=508, max_extra_seq=1950 2024-12-06 08:01:21,832 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.8 pTM=0.729 ipTM=0.262 2024-12-06 08:01:33,453 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=73.8 pTM=0.755 ipTM=0.211 tol=7.9 2024-12-06 08:01:45,090 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74 pTM=0.758 ipTM=0.274 tol=7.27 2024-12-06 08:01:56,736 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75 pTM=0.764 ipTM=0.425 tol=4.57 2024-12-06 08:02:08,368 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74.4 pTM=0.755 ipTM=0.352 tol=3.61 2024-12-06 08:02:20,053 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.8 pTM=0.76 ipTM=0.345 tol=2.88 2024-12-06 08:02:31,747 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75 pTM=0.76 ipTM=0.352 tol=2.06 2024-12-06 08:02:43,442 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=74.9 pTM=0.761 ipTM=0.385 tol=3.06 2024-12-06 08:02:55,159 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=75.2 pTM=0.763 ipTM=0.376 tol=2.37 2024-12-06 08:03:06,859 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.9 pTM=0.76 ipTM=0.359 tol=2 2024-12-06 08:03:18,548 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.6 pTM=0.755 ipTM=0.334 tol=2.22 2024-12-06 08:03:30,262 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.6 pTM=0.756 ipTM=0.353 tol=1.81 2024-12-06 08:03:41,995 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=75 pTM=0.76 ipTM=0.355 tol=2.64 2024-12-06 08:03:53,719 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74.6 pTM=0.758 ipTM=0.339 tol=1.91 2024-12-06 08:04:05,466 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74.9 pTM=0.759 ipTM=0.36 tol=1.78 2024-12-06 08:04:17,196 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.8 pTM=0.76 ipTM=0.335 tol=2.79 2024-12-06 08:04:28,938 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75.2 pTM=0.763 ipTM=0.372 tol=3.02 2024-12-06 08:04:40,657 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.4 pTM=0.756 ipTM=0.345 tol=2.26 2024-12-06 08:04:52,384 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.5 pTM=0.753 ipTM=0.318 tol=2.8 2024-12-06 08:05:04,092 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.4 pTM=0.756 ipTM=0.368 tol=2.95 2024-12-06 08:05:15,834 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.7 pTM=0.758 ipTM=0.377 tol=2.59 2024-12-06 08:05:27,553 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.7 pTM=0.757 ipTM=0.391 tol=1.99 2024-12-06 08:05:39,296 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.9 pTM=0.761 ipTM=0.399 tol=2.43 2024-12-06 08:05:51,009 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.6 pTM=0.759 ipTM=0.382 tol=2.88 2024-12-06 08:06:02,727 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.6 pTM=0.756 ipTM=0.394 tol=2.45 2024-12-06 08:06:14,447 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.9 pTM=0.758 ipTM=0.388 tol=2.36 2024-12-06 08:06:26,170 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75 pTM=0.757 ipTM=0.381 tol=2.73 2024-12-06 08:06:37,884 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74.9 pTM=0.757 ipTM=0.365 tol=1.59 2024-12-06 08:06:49,609 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.9 pTM=0.756 ipTM=0.389 tol=1.31 2024-12-06 08:07:01,320 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74.5 pTM=0.752 ipTM=0.352 tol=1.28 2024-12-06 08:07:13,047 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.7 pTM=0.753 ipTM=0.334 tol=1.91 2024-12-06 08:07:13,048 alphafold2_multimer_v3_model_1_seed_000 took 524.7s (30 recycles) 2024-12-06 08:07:25,148 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.5 pTM=0.725 ipTM=0.165 2024-12-06 08:07:36,945 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.9 pTM=0.764 ipTM=0.412 tol=5.91 2024-12-06 08:07:48,756 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.1 pTM=0.766 ipTM=0.332 tol=3.14 2024-12-06 08:08:00,540 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.2 pTM=0.767 ipTM=0.453 tol=2.43 2024-12-06 08:08:12,323 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.8 pTM=0.758 ipTM=0.321 tol=3.07 2024-12-06 08:08:24,121 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75 pTM=0.761 ipTM=0.37 tol=2.48 2024-12-06 08:08:35,918 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.6 pTM=0.755 ipTM=0.282 tol=2.34 2024-12-06 08:08:47,704 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.4 pTM=0.753 ipTM=0.269 tol=1.58 2024-12-06 08:08:59,487 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.4 pTM=0.756 ipTM=0.307 tol=1.65 2024-12-06 08:09:11,278 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.4 pTM=0.754 ipTM=0.276 tol=1.4 2024-12-06 08:09:23,054 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.4 pTM=0.757 ipTM=0.343 tol=1.62 2024-12-06 08:09:34,817 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74 pTM=0.75 ipTM=0.272 tol=2.14 2024-12-06 08:09:46,617 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.4 pTM=0.756 ipTM=0.28 tol=2.06 2024-12-06 08:09:58,379 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74 pTM=0.75 ipTM=0.26 tol=2.3 2024-12-06 08:10:10,156 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74 pTM=0.754 ipTM=0.314 tol=2.05 2024-12-06 08:10:21,930 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.1 pTM=0.75 ipTM=0.251 tol=2.41 2024-12-06 08:10:33,721 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.2 pTM=0.755 ipTM=0.296 tol=2.22 2024-12-06 08:10:45,483 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.8 pTM=0.747 ipTM=0.251 tol=2.25 2024-12-06 08:10:57,238 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.4 pTM=0.742 ipTM=0.209 tol=2.27 2024-12-06 08:11:09,015 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.6 pTM=0.745 ipTM=0.216 tol=3.36 2024-12-06 08:11:20,798 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.9 pTM=0.75 ipTM=0.244 tol=3.11 2024-12-06 08:11:32,549 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.3 pTM=0.741 ipTM=0.208 tol=2.96 2024-12-06 08:11:44,328 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.4 pTM=0.747 ipTM=0.222 tol=2.78 2024-12-06 08:11:56,104 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.5 pTM=0.745 ipTM=0.219 tol=5.79 2024-12-06 08:12:07,876 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.6 pTM=0.748 ipTM=0.226 tol=2.14 2024-12-06 08:12:19,660 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.6 pTM=0.743 ipTM=0.212 tol=2.68 2024-12-06 08:12:31,427 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.3 pTM=0.745 ipTM=0.216 tol=1.94 2024-12-06 08:12:43,193 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.3 pTM=0.743 ipTM=0.223 tol=2.41 2024-12-06 08:12:54,956 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.3 pTM=0.745 ipTM=0.223 tol=1.94 2024-12-06 08:13:06,734 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.5 pTM=0.744 ipTM=0.227 tol=1.86 2024-12-06 08:13:18,477 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.3 pTM=0.746 ipTM=0.239 tol=2.03 2024-12-06 08:13:18,478 alphafold2_multimer_v3_model_2_seed_000 took 365.1s (30 recycles) 2024-12-06 08:13:30,604 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.4 pTM=0.735 ipTM=0.277 2024-12-06 08:13:42,402 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.4 pTM=0.765 ipTM=0.279 tol=8.61 2024-12-06 08:13:54,202 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.9 pTM=0.742 ipTM=0.213 tol=4.33 2024-12-06 08:14:05,981 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.1 pTM=0.744 ipTM=0.227 tol=3.02 2024-12-06 08:14:17,741 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.3 pTM=0.74 ipTM=0.204 tol=4.38 2024-12-06 08:14:29,515 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.4 pTM=0.741 ipTM=0.204 tol=4.36 2024-12-06 08:14:41,340 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.8 pTM=0.741 ipTM=0.188 tol=4.21 2024-12-06 08:14:53,169 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.9 pTM=0.746 ipTM=0.231 tol=3.1 2024-12-06 08:15:04,996 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.9 pTM=0.742 ipTM=0.194 tol=2.97 2024-12-06 08:15:16,791 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.8 pTM=0.745 ipTM=0.248 tol=2.29 2024-12-06 08:15:28,616 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.8 pTM=0.742 ipTM=0.192 tol=2.68 2024-12-06 08:15:40,394 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.6 pTM=0.742 ipTM=0.248 tol=2.56 2024-12-06 08:15:52,219 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.9 pTM=0.743 ipTM=0.198 tol=2.25 2024-12-06 08:16:03,995 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.9 pTM=0.75 ipTM=0.307 tol=2.07 2024-12-06 08:16:15,828 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.9 pTM=0.742 ipTM=0.206 tol=3.51 2024-12-06 08:16:27,629 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.5 pTM=0.742 ipTM=0.242 tol=4.09 2024-12-06 08:16:39,459 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.8 pTM=0.742 ipTM=0.199 tol=3.3 2024-12-06 08:16:51,256 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.3 pTM=0.741 ipTM=0.238 tol=1.95 2024-12-06 08:17:03,074 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.7 pTM=0.742 ipTM=0.199 tol=2.14 2024-12-06 08:17:14,901 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.5 pTM=0.742 ipTM=0.203 tol=2.65 2024-12-06 08:17:26,702 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.6 pTM=0.741 ipTM=0.194 tol=2.23 2024-12-06 08:17:38,500 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.5 pTM=0.743 ipTM=0.239 tol=1.66 2024-12-06 08:17:50,345 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.8 pTM=0.743 ipTM=0.182 tol=4.16 2024-12-06 08:18:02,152 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.6 pTM=0.743 ipTM=0.222 tol=4.6 2024-12-06 08:18:14,002 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.9 pTM=0.745 ipTM=0.196 tol=3.98 2024-12-06 08:18:25,813 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.2 pTM=0.74 ipTM=0.224 tol=3.53 2024-12-06 08:18:37,608 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.6 pTM=0.741 ipTM=0.198 tol=3.1 2024-12-06 08:18:49,388 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.8 pTM=0.746 ipTM=0.263 tol=2.2 2024-12-06 08:19:01,227 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.8 pTM=0.741 ipTM=0.189 tol=2.93 2024-12-06 08:19:13,036 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.9 pTM=0.748 ipTM=0.262 tol=3.13 2024-12-06 08:19:24,860 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=73.9 pTM=0.744 ipTM=0.198 tol=2.81 2024-12-06 08:19:24,861 alphafold2_multimer_v3_model_3_seed_000 took 366.0s (30 recycles) 2024-12-06 08:19:36,985 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.9 pTM=0.753 ipTM=0.614 2024-12-06 08:19:48,733 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.4 pTM=0.742 ipTM=0.247 tol=8.71 2024-12-06 08:20:00,535 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.1 pTM=0.763 ipTM=0.254 tol=7.12 2024-12-06 08:20:12,333 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.1 pTM=0.748 ipTM=0.197 tol=3.96 2024-12-06 08:20:24,104 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.1 pTM=0.751 ipTM=0.225 tol=3.49 2024-12-06 08:20:35,862 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.2 pTM=0.749 ipTM=0.269 tol=5.1 2024-12-06 08:20:47,655 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.8 pTM=0.753 ipTM=0.317 tol=2.23 2024-12-06 08:20:59,475 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=74.3 pTM=0.757 ipTM=0.29 tol=1.17 2024-12-06 08:21:11,271 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=74 pTM=0.758 ipTM=0.319 tol=4.75 2024-12-06 08:21:23,086 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=74 pTM=0.753 ipTM=0.243 tol=4 2024-12-06 08:21:34,888 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=74 pTM=0.756 ipTM=0.279 tol=2.93 2024-12-06 08:21:46,649 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.2 pTM=0.748 ipTM=0.249 tol=2.87 2024-12-06 08:21:58,452 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74 pTM=0.756 ipTM=0.281 tol=1.97 2024-12-06 08:22:10,249 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=74 pTM=0.751 ipTM=0.266 tol=1.78 2024-12-06 08:22:22,027 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73.9 pTM=0.755 ipTM=0.29 tol=3.42 2024-12-06 08:22:33,827 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73.9 pTM=0.752 ipTM=0.253 tol=3.87 2024-12-06 08:22:45,637 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.7 pTM=0.76 ipTM=0.311 tol=1.62 2024-12-06 08:22:57,446 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.9 pTM=0.747 ipTM=0.196 tol=2.1 2024-12-06 08:23:09,251 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.4 pTM=0.757 ipTM=0.223 tol=2.59 2024-12-06 08:23:21,060 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=74 pTM=0.75 ipTM=0.197 tol=2.13 2024-12-06 08:23:32,861 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.6 pTM=0.758 ipTM=0.281 tol=1.76 2024-12-06 08:23:44,650 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.8 pTM=0.745 ipTM=0.21 tol=2.03 2024-12-06 08:23:56,459 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74.4 pTM=0.762 ipTM=0.248 tol=2.68 2024-12-06 08:24:08,286 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74.1 pTM=0.752 ipTM=0.199 tol=2.64 2024-12-06 08:24:20,117 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74.6 pTM=0.76 ipTM=0.233 tol=2.53 2024-12-06 08:24:31,927 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.1 pTM=0.748 ipTM=0.198 tol=2.52 2024-12-06 08:24:43,724 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.5 pTM=0.759 ipTM=0.23 tol=2.06 2024-12-06 08:24:55,508 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.2 pTM=0.752 ipTM=0.24 tol=2.03 2024-12-06 08:25:07,308 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.7 pTM=0.76 ipTM=0.32 tol=2.35 2024-12-06 08:25:19,130 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.3 pTM=0.751 ipTM=0.202 tol=2 2024-12-06 08:25:30,898 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.1 pTM=0.756 ipTM=0.229 tol=2.19 2024-12-06 08:25:30,899 alphafold2_multimer_v3_model_4_seed_000 took 365.7s (30 recycles) 2024-12-06 08:25:43,101 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72 pTM=0.737 ipTM=0.213 2024-12-06 08:25:54,971 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.2 pTM=0.771 ipTM=0.524 tol=7.95 2024-12-06 08:26:06,842 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=74.1 pTM=0.758 ipTM=0.336 tol=4.43 2024-12-06 08:26:18,699 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=74 pTM=0.76 ipTM=0.545 tol=8.41 2024-12-06 08:26:30,575 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.6 pTM=0.751 ipTM=0.234 tol=3.85 2024-12-06 08:26:42,452 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.7 pTM=0.745 ipTM=0.179 tol=3.41 2024-12-06 08:26:54,327 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74.1 pTM=0.753 ipTM=0.289 tol=6.53 2024-12-06 08:27:06,200 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=74 pTM=0.753 ipTM=0.227 tol=6.42 2024-12-06 08:27:18,081 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.1 pTM=0.754 ipTM=0.217 tol=5.61 2024-12-06 08:27:29,962 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.4 pTM=0.758 ipTM=0.24 tol=3.18 2024-12-06 08:27:41,827 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.4 pTM=0.762 ipTM=0.346 tol=4.41 2024-12-06 08:27:53,683 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.2 pTM=0.755 ipTM=0.237 tol=3.41 2024-12-06 08:28:05,543 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.4 pTM=0.762 ipTM=0.288 tol=3.51 2024-12-06 08:28:17,374 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.1 pTM=0.756 ipTM=0.272 tol=3.14 2024-12-06 08:28:29,240 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.7 pTM=0.762 ipTM=0.351 tol=2 2024-12-06 08:28:41,108 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.8 pTM=0.761 ipTM=0.287 tol=1.05 2024-12-06 08:28:52,980 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.9 pTM=0.767 ipTM=0.392 tol=1.27 2024-12-06 08:29:04,845 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.9 pTM=0.761 ipTM=0.272 tol=0.972 2024-12-06 08:29:16,709 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=75.4 pTM=0.767 ipTM=0.397 tol=1.42 2024-12-06 08:29:28,595 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=75.3 pTM=0.763 ipTM=0.256 tol=2.57 2024-12-06 08:29:40,453 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=75.6 pTM=0.769 ipTM=0.418 tol=2.35 2024-12-06 08:29:52,325 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=75.7 pTM=0.765 ipTM=0.315 tol=2.68 2024-12-06 08:30:04,216 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76.2 pTM=0.776 ipTM=0.481 tol=1.83 2024-12-06 08:30:16,096 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75.8 pTM=0.768 ipTM=0.295 tol=1.2 2024-12-06 08:30:27,975 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=75.6 pTM=0.769 ipTM=0.389 tol=1.28 2024-12-06 08:30:39,847 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=75.4 pTM=0.762 ipTM=0.27 tol=1.23 2024-12-06 08:30:51,703 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.5 pTM=0.767 ipTM=0.391 tol=1.89 2024-12-06 08:31:03,554 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=75.2 pTM=0.763 ipTM=0.283 tol=3.08 2024-12-06 08:31:15,413 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=75.6 pTM=0.769 ipTM=0.406 tol=2.2 2024-12-06 08:31:27,285 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=75.5 pTM=0.764 ipTM=0.272 tol=0.872 2024-12-06 08:31:39,163 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.1 pTM=0.772 ipTM=0.474 tol=1.08 2024-12-06 08:31:39,164 alphafold2_multimer_v3_model_5_seed_000 took 367.9s (30 recycles) 2024-12-06 08:31:39,532 reranking models by 'multimer' metric 2024-12-06 08:31:42,573 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 08:32:21,917 Relaxation took 42.4s 2024-12-06 08:32:21,917 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.1 pTM=0.772 ipTM=0.474 2024-12-06 08:33:22,806 Relaxation took 60.9s 2024-12-06 08:33:22,807 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.7 pTM=0.753 ipTM=0.334 2024-12-06 08:34:26,985 Relaxation took 64.2s 2024-12-06 08:34:26,985 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.3 pTM=0.746 ipTM=0.239 2024-12-06 08:35:11,645 Relaxation took 44.7s 2024-12-06 08:35:11,645 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.1 pTM=0.756 ipTM=0.229 2024-12-06 08:36:05,396 Relaxation took 53.8s 2024-12-06 08:36:05,396 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.9 pTM=0.744 ipTM=0.198 2024-12-06 08:36:06,737 Done