2024-12-06 09:24:57,745 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 09:24:58,066 Running on GPU
2024-12-06 09:25:02,182 Found 6 citations for tools or databases
2024-12-06 09:25:02,183 Query 1/1: HECTD3_RPL3 (length 1264)
2024-12-06 09:25:02,473 Sleeping for 8s. Reason: PENDING
2024-12-06 09:25:10,732 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:25:17,999 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:25:25,254 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:25:30,517 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:25:36,777 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:25:43,034 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:25:52,292 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:25:59,554 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:26:06,813 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:26:13,069 Sleeping for 8s. Reason: RUNNING
2024-12-06 09:26:21,328 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:26:31,587 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:26:40,851 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:26:47,109 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:26:52,363 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:26:59,625 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:27:08,885 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:27:16,141 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:27:23,401 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:27:29,654 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:27:35,913 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:27:41,172 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:27:50,441 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:27:57,697 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:28:05,555 Sleeping for 10s. Reason: PENDING
2024-12-06 09:28:15,814 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:28:25,080 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:28:34,342 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:28:39,608 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:28:49,876 Sleeping for 8s. Reason: RUNNING
2024-12-06 09:28:58,133 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:29:08,394 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:29:15,655 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:29:24,915 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:29:31,185 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:29:39,320 Setting max_seq=508, max_extra_seq=2048
2024-12-06 09:32:14,050 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=77.8 pTM=0.583 ipTM=0.185
2024-12-06 09:32:51,857 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=77.9 pTM=0.573 ipTM=0.198 tol=7.52
2024-12-06 09:33:29,742 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=78.5 pTM=0.58 ipTM=0.289 tol=2.29
2024-12-06 09:34:07,684 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78.6 pTM=0.558 ipTM=0.178 tol=1.34
2024-12-06 09:34:45,690 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78.7 pTM=0.555 ipTM=0.171 tol=3.16
2024-12-06 09:35:23,761 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=78.9 pTM=0.559 ipTM=0.175 tol=1.67
2024-12-06 09:36:01,843 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78.6 pTM=0.552 ipTM=0.171 tol=1.31
2024-12-06 09:36:39,954 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=79.1 pTM=0.553 ipTM=0.171 tol=3.76
2024-12-06 09:37:18,061 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=78.9 pTM=0.555 ipTM=0.178 tol=1.51
2024-12-06 09:37:56,171 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=78.9 pTM=0.555 ipTM=0.173 tol=3.81
2024-12-06 09:38:34,267 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=79.2 pTM=0.555 ipTM=0.175 tol=2.21
2024-12-06 09:39:12,354 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=79.2 pTM=0.553 ipTM=0.175 tol=1.29
2024-12-06 09:39:50,456 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=79.2 pTM=0.549 ipTM=0.169 tol=3.18
2024-12-06 09:40:28,525 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=79.4 pTM=0.557 ipTM=0.181 tol=1.17
2024-12-06 09:41:06,569 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=79.2 pTM=0.56 ipTM=0.177 tol=3.62
2024-12-06 09:41:44,576 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=79.2 pTM=0.553 ipTM=0.178 tol=1.18
2024-12-06 09:42:22,579 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=79.5 pTM=0.553 ipTM=0.177 tol=3.18
2024-12-06 09:43:00,575 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=79.6 pTM=0.554 ipTM=0.175 tol=1.65
2024-12-06 09:43:38,607 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=79.1 pTM=0.552 ipTM=0.175 tol=3.67
2024-12-06 09:44:16,681 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=79.1 pTM=0.548 ipTM=0.171 tol=1.55
2024-12-06 09:44:54,715 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=78.8 pTM=0.546 ipTM=0.167 tol=1.45
2024-12-06 09:45:32,769 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=79.4 pTM=0.553 ipTM=0.167 tol=1.42
2024-12-06 09:46:10,808 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=79.2 pTM=0.548 ipTM=0.199 tol=2.07
2024-12-06 09:46:48,827 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=79.3 pTM=0.553 ipTM=0.289 tol=2.17
2024-12-06 09:47:26,881 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=78.9 pTM=0.55 ipTM=0.32 tol=1.52
2024-12-06 09:48:04,936 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=79.2 pTM=0.552 ipTM=0.325 tol=3.27
2024-12-06 09:48:42,957 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=79.2 pTM=0.555 ipTM=0.318 tol=0.827
2024-12-06 09:49:21,012 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=79 pTM=0.553 ipTM=0.312 tol=2.45
2024-12-06 09:49:59,062 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=79.1 pTM=0.551 ipTM=0.299 tol=1.42
2024-12-06 09:50:37,109 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=79 pTM=0.555 ipTM=0.3 tol=2.7
2024-12-06 09:51:15,195 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=79.2 pTM=0.559 ipTM=0.265 tol=0.943
2024-12-06 09:51:15,196 alphafold2_multimer_v3_model_1_seed_000 took 1290.8s (30 recycles)
2024-12-06 09:51:54,241 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77.2 pTM=0.575 ipTM=0.179
2024-12-06 09:52:32,314 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78 pTM=0.579 ipTM=0.357 tol=5.89
2024-12-06 09:53:10,387 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.8 pTM=0.581 ipTM=0.33 tol=2.53
2024-12-06 09:53:48,460 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.2 pTM=0.58 ipTM=0.368 tol=2.18
2024-12-06 09:54:26,525 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=79.5 pTM=0.584 ipTM=0.385 tol=1.23
2024-12-06 09:55:04,621 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=79.5 pTM=0.578 ipTM=0.381 tol=1.59
2024-12-06 09:55:42,684 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=79.3 pTM=0.58 ipTM=0.359 tol=2.03
2024-12-06 09:56:20,755 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79.5 pTM=0.578 ipTM=0.339 tol=1.59
2024-12-06 09:56:58,824 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=79.1 pTM=0.576 ipTM=0.391 tol=1.06
2024-12-06 09:57:36,911 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.8 pTM=0.579 ipTM=0.43 tol=1.31
2024-12-06 09:58:15,020 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79.4 pTM=0.579 ipTM=0.408 tol=0.998
2024-12-06 09:58:53,107 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=79.4 pTM=0.579 ipTM=0.402 tol=1.58
2024-12-06 09:59:31,194 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=79.4 pTM=0.576 ipTM=0.383 tol=3.47
2024-12-06 10:00:09,284 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=79.6 pTM=0.579 ipTM=0.374 tol=2.13
2024-12-06 10:00:47,348 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=79.8 pTM=0.578 ipTM=0.362 tol=3.16
2024-12-06 10:01:25,390 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=79.2 pTM=0.577 ipTM=0.365 tol=1.81
2024-12-06 10:02:03,490 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=79.5 pTM=0.579 ipTM=0.393 tol=0.711
2024-12-06 10:02:41,534 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=79.5 pTM=0.576 ipTM=0.384 tol=1.11
2024-12-06 10:03:19,591 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=79.4 pTM=0.578 ipTM=0.379 tol=1.24
2024-12-06 10:03:57,657 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=79.2 pTM=0.574 ipTM=0.372 tol=0.945
2024-12-06 10:04:35,703 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=79.1 pTM=0.574 ipTM=0.352 tol=1.31
2024-12-06 10:05:13,784 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=79.7 pTM=0.578 ipTM=0.38 tol=1.75
2024-12-06 10:05:51,858 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=79.8 pTM=0.579 ipTM=0.387 tol=0.86
2024-12-06 10:06:29,894 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=79.4 pTM=0.579 ipTM=0.389 tol=0.88
2024-12-06 10:07:07,970 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=79.4 pTM=0.576 ipTM=0.392 tol=1.52
2024-12-06 10:07:46,030 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=79.2 pTM=0.573 ipTM=0.386 tol=1.09
2024-12-06 10:08:24,087 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=79.3 pTM=0.572 ipTM=0.388 tol=0.956
2024-12-06 10:09:02,176 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=79.5 pTM=0.575 ipTM=0.375 tol=3.4
2024-12-06 10:09:40,198 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=79.6 pTM=0.574 ipTM=0.346 tol=1.98
2024-12-06 10:10:18,221 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=79.2 pTM=0.575 ipTM=0.36 tol=3.29
2024-12-06 10:10:56,288 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=79.5 pTM=0.581 ipTM=0.359 tol=1.79
2024-12-06 10:10:56,289 alphafold2_multimer_v3_model_2_seed_000 took 1180.1s (30 recycles)
2024-12-06 10:11:35,298 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=77.2 pTM=0.556 ipTM=0.18
2024-12-06 10:12:13,343 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=77.6 pTM=0.548 ipTM=0.19 tol=6.99
2024-12-06 10:12:51,387 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.1 pTM=0.554 ipTM=0.248 tol=1.27
2024-12-06 10:13:29,428 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.9 pTM=0.546 ipTM=0.269 tol=3.05
2024-12-06 10:14:07,434 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78.8 pTM=0.562 ipTM=0.284 tol=3.12
2024-12-06 10:14:45,455 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=78.6 pTM=0.557 ipTM=0.262 tol=0.8
2024-12-06 10:15:23,477 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.6 pTM=0.561 ipTM=0.25 tol=0.858
2024-12-06 10:16:01,524 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=78.8 pTM=0.559 ipTM=0.253 tol=1.07
2024-12-06 10:16:39,545 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=78.7 pTM=0.559 ipTM=0.258 tol=0.898
2024-12-06 10:17:17,557 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.7 pTM=0.556 ipTM=0.268 tol=0.803
2024-12-06 10:17:55,564 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=78.8 pTM=0.561 ipTM=0.214 tol=1.41
2024-12-06 10:18:33,595 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=78.8 pTM=0.56 ipTM=0.219 tol=0.77
2024-12-06 10:19:11,649 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.4 pTM=0.555 ipTM=0.193 tol=0.868
2024-12-06 10:19:49,734 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=78.5 pTM=0.555 ipTM=0.216 tol=1.06
2024-12-06 10:20:27,783 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=78.6 pTM=0.559 ipTM=0.212 tol=0.674
2024-12-06 10:21:05,853 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=78.5 pTM=0.556 ipTM=0.21 tol=0.602
2024-12-06 10:21:43,908 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=78.4 pTM=0.558 ipTM=0.2 tol=0.681
2024-12-06 10:22:21,961 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78.4 pTM=0.56 ipTM=0.228 tol=1.12
2024-12-06 10:23:00,040 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=78.4 pTM=0.553 ipTM=0.227 tol=0.773
2024-12-06 10:23:38,133 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=78.7 pTM=0.561 ipTM=0.235 tol=0.695
2024-12-06 10:24:16,172 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=78.2 pTM=0.558 ipTM=0.2 tol=0.785
2024-12-06 10:24:54,205 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=78.3 pTM=0.557 ipTM=0.198 tol=0.503
2024-12-06 10:25:32,241 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=78.4 pTM=0.553 ipTM=0.212 tol=1.41
2024-12-06 10:26:10,280 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=78.4 pTM=0.562 ipTM=0.24 tol=0.909
2024-12-06 10:26:48,354 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=78.5 pTM=0.563 ipTM=0.279 tol=1.19
2024-12-06 10:27:26,387 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=78.2 pTM=0.559 ipTM=0.244 tol=0.573
2024-12-06 10:28:04,408 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=78.4 pTM=0.562 ipTM=0.236 tol=0.478
2024-12-06 10:28:04,409 alphafold2_multimer_v3_model_3_seed_000 took 1027.2s (26 recycles)
2024-12-06 10:28:43,486 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76.1 pTM=0.571 ipTM=0.195
2024-12-06 10:29:21,620 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.1 pTM=0.55 ipTM=0.175 tol=5
2024-12-06 10:29:59,704 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.6 pTM=0.57 ipTM=0.182 tol=3.69
2024-12-06 10:30:37,782 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=78.4 pTM=0.58 ipTM=0.188 tol=2.39
2024-12-06 10:31:15,836 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=78.7 pTM=0.581 ipTM=0.21 tol=0.75
2024-12-06 10:31:53,875 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=78.6 pTM=0.584 ipTM=0.195 tol=0.759
2024-12-06 10:32:31,954 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78.5 pTM=0.586 ipTM=0.219 tol=1.1
2024-12-06 10:33:10,015 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=78.6 pTM=0.585 ipTM=0.197 tol=0.741
2024-12-06 10:33:48,111 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=78.2 pTM=0.587 ipTM=0.228 tol=1.38
2024-12-06 10:34:26,170 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=78.6 pTM=0.585 ipTM=0.23 tol=1.73
2024-12-06 10:35:04,233 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=78.4 pTM=0.591 ipTM=0.208 tol=0.844
2024-12-06 10:35:42,266 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=78.5 pTM=0.589 ipTM=0.212 tol=0.587
2024-12-06 10:36:20,314 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=78.6 pTM=0.589 ipTM=0.2 tol=0.73
2024-12-06 10:36:58,355 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=78.4 pTM=0.589 ipTM=0.204 tol=1.85
2024-12-06 10:37:36,393 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78.5 pTM=0.592 ipTM=0.204 tol=1.41
2024-12-06 10:38:14,425 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.4 pTM=0.588 ipTM=0.202 tol=1.26
2024-12-06 10:38:52,442 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.4 pTM=0.591 ipTM=0.203 tol=1.17
2024-12-06 10:39:30,491 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=78.6 pTM=0.592 ipTM=0.204 tol=1.06
2024-12-06 10:40:08,551 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78.4 pTM=0.591 ipTM=0.2 tol=1.01
2024-12-06 10:40:46,666 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=78.3 pTM=0.586 ipTM=0.198 tol=1.4
2024-12-06 10:41:24,697 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78.2 pTM=0.593 ipTM=0.2 tol=1.41
2024-12-06 10:42:02,707 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=78.3 pTM=0.587 ipTM=0.204 tol=0.988
2024-12-06 10:42:40,731 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=78.6 pTM=0.593 ipTM=0.2 tol=1.3
2024-12-06 10:43:18,728 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78.2 pTM=0.589 ipTM=0.202 tol=1.23
2024-12-06 10:43:56,743 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=78.6 pTM=0.592 ipTM=0.203 tol=1.45
2024-12-06 10:44:34,766 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=78 pTM=0.581 ipTM=0.196 tol=1.8
2024-12-06 10:45:12,791 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=78.5 pTM=0.595 ipTM=0.201 tol=1.68
2024-12-06 10:45:50,832 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78.6 pTM=0.591 ipTM=0.199 tol=1.31
2024-12-06 10:46:28,885 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=78.4 pTM=0.598 ipTM=0.205 tol=1.12
2024-12-06 10:47:06,944 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=78.8 pTM=0.597 ipTM=0.203 tol=0.604
2024-12-06 10:47:45,046 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=78.4 pTM=0.591 ipTM=0.211 tol=1.27
2024-12-06 10:47:45,047 alphafold2_multimer_v3_model_4_seed_000 took 1179.7s (30 recycles)
2024-12-06 10:48:24,076 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.6 pTM=0.56 ipTM=0.19
2024-12-06 10:49:02,127 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.6 pTM=0.556 ipTM=0.215 tol=2.62
2024-12-06 10:49:40,172 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.1 pTM=0.565 ipTM=0.35 tol=3.28
2024-12-06 10:50:18,256 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=78.3 pTM=0.564 ipTM=0.328 tol=1.78
2024-12-06 10:50:56,351 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=78.5 pTM=0.562 ipTM=0.345 tol=1.76
2024-12-06 10:51:34,390 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=78.4 pTM=0.561 ipTM=0.306 tol=1.92
2024-12-06 10:52:12,465 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=78.3 pTM=0.56 ipTM=0.264 tol=1.57
2024-12-06 10:52:50,527 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=78.7 pTM=0.563 ipTM=0.258 tol=1.13
2024-12-06 10:53:28,564 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78.8 pTM=0.57 ipTM=0.308 tol=0.841
2024-12-06 10:54:06,611 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=78.7 pTM=0.566 ipTM=0.328 tol=2.71
2024-12-06 10:54:44,670 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78.7 pTM=0.565 ipTM=0.311 tol=2.07
2024-12-06 10:55:22,707 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=78.6 pTM=0.572 ipTM=0.295 tol=1.16
2024-12-06 10:56:00,752 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=78.9 pTM=0.572 ipTM=0.312 tol=0.924
2024-12-06 10:56:38,787 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.9 pTM=0.575 ipTM=0.316 tol=1.05
2024-12-06 10:57:16,804 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78.8 pTM=0.574 ipTM=0.312 tol=2.13
2024-12-06 10:57:54,810 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=79.1 pTM=0.58 ipTM=0.297 tol=2.65
2024-12-06 10:58:32,816 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=79.1 pTM=0.572 ipTM=0.309 tol=3.19
2024-12-06 10:59:10,856 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.9 pTM=0.573 ipTM=0.307 tol=2.54
2024-12-06 10:59:48,927 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=78.8 pTM=0.571 ipTM=0.289 tol=1.13
2024-12-06 11:00:26,942 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=78.8 pTM=0.573 ipTM=0.293 tol=1.14
2024-12-06 11:01:04,957 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=78.2 pTM=0.562 ipTM=0.239 tol=1.29
2024-12-06 11:01:43,014 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=78.6 pTM=0.566 ipTM=0.276 tol=2.36
2024-12-06 11:02:21,097 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=78.6 pTM=0.564 ipTM=0.277 tol=1.12
2024-12-06 11:02:59,105 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=78.6 pTM=0.568 ipTM=0.264 tol=1.5
2024-12-06 11:03:37,102 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=79.2 pTM=0.577 ipTM=0.334 tol=3.95
2024-12-06 11:04:15,137 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=78.2 pTM=0.564 ipTM=0.25 tol=2.97
2024-12-06 11:04:53,158 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=78.6 pTM=0.568 ipTM=0.245 tol=1.12
2024-12-06 11:05:31,232 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=78.8 pTM=0.571 ipTM=0.279 tol=0.822
2024-12-06 11:06:09,233 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=78.6 pTM=0.568 ipTM=0.269 tol=1.09
2024-12-06 11:06:47,246 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=78.8 pTM=0.576 ipTM=0.264 tol=1.1
2024-12-06 11:07:25,348 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=78.6 pTM=0.563 ipTM=0.234 tol=1.18
2024-12-06 11:07:25,349 alphafold2_multimer_v3_model_5_seed_000 took 1179.3s (30 recycles)
2024-12-06 11:07:26,301 reranking models by 'multimer' metric
2024-12-06 11:07:27,849 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 11:10:28,138 Relaxation took 181.8s
2024-12-06 11:10:28,138 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=79.5 pTM=0.581 ipTM=0.359
2024-12-06 11:11:52,083 Relaxation took 83.9s
2024-12-06 11:11:52,083 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=79.2 pTM=0.559 ipTM=0.265
2024-12-06 11:13:18,176 Relaxation took 86.1s
2024-12-06 11:13:18,176 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.4 pTM=0.562 ipTM=0.236
2024-12-06 11:15:04,726 Relaxation took 106.5s
2024-12-06 11:15:04,727 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.6 pTM=0.563 ipTM=0.234
2024-12-06 11:19:46,295 Relaxation took 281.6s
2024-12-06 11:19:46,295 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=78.4 pTM=0.591 ipTM=0.211
2024-12-06 11:19:48,883 Done