2024-12-06 09:30:48,264 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 09:30:48,593 Running on GPU
2024-12-06 09:30:52,290 Found 6 citations for tools or databases
2024-12-06 09:30:52,291 Query 1/1: HECW2_ARRDC3 (length 1986)
2024-12-06 09:30:52,578 Sleeping for 10s. Reason: PENDING
2024-12-06 09:31:02,835 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:31:12,097 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:31:19,360 Sleeping for 5s. Reason: RUNNING
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2024-12-06 09:31:33,866 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:31:44,128 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:31:51,384 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:31:56,640 Sleeping for 8s. Reason: RUNNING
2024-12-06 09:32:04,895 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:32:12,155 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:32:18,423 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:32:24,688 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:32:33,945 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:32:43,209 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:32:48,473 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:32:53,729 Sleeping for 8s. Reason: RUNNING
2024-12-06 09:33:01,982 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:33:07,232 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:33:12,484 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:33:17,737 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:33:24,995 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:33:35,267 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:33:44,529 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:33:53,838 Sleeping for 6s. Reason: PENDING
2024-12-06 09:34:00,096 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:34:09,357 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:34:18,615 Sleeping for 8s. Reason: RUNNING
2024-12-06 09:34:26,866 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:34:33,124 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:34:38,389 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:34:48,650 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:34:55,903 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:35:01,161 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:35:08,416 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:35:15,675 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:35:22,936 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:35:29,196 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:35:36,451 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:35:42,716 Sleeping for 8s. Reason: RUNNING
2024-12-06 09:35:50,971 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:36:00,233 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:36:06,493 Sleeping for 8s. Reason: RUNNING
2024-12-06 09:36:14,749 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:36:21,006 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:36:31,262 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:36:41,523 Sleeping for 8s. Reason: RUNNING
2024-12-06 09:36:57,268 Setting max_seq=508, max_extra_seq=2048
2024-12-06 09:42:10,498 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48.6 pTM=0.323 ipTM=0.232
2024-12-06 09:44:45,137 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.8 pTM=0.329 ipTM=0.224 tol=23.5
2024-12-06 09:47:19,845 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.8 pTM=0.327 ipTM=0.227 tol=15.8
2024-12-06 09:49:54,533 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.7 pTM=0.323 ipTM=0.227 tol=10.7
2024-12-06 09:52:29,253 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.8 pTM=0.32 ipTM=0.231 tol=7.09
2024-12-06 09:55:03,988 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.5 pTM=0.318 ipTM=0.23 tol=7.39
2024-12-06 09:57:38,739 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=51.4 pTM=0.321 ipTM=0.231 tol=5.33
2024-12-06 10:00:13,443 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51 pTM=0.321 ipTM=0.232 tol=5.33
2024-12-06 10:02:48,155 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51.4 pTM=0.325 ipTM=0.231 tol=5.81
2024-12-06 10:05:22,892 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51.1 pTM=0.322 ipTM=0.233 tol=5.04
2024-12-06 10:07:57,641 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.6 pTM=0.323 ipTM=0.233 tol=8.26
2024-12-06 10:10:32,306 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.1 pTM=0.324 ipTM=0.233 tol=6.74
2024-12-06 10:13:07,016 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.6 pTM=0.323 ipTM=0.237 tol=7.03
2024-12-06 10:15:41,734 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.2 pTM=0.325 ipTM=0.234 tol=2.83
2024-12-06 10:18:16,463 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.8 pTM=0.323 ipTM=0.237 tol=5.43
2024-12-06 10:20:51,118 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.3 pTM=0.323 ipTM=0.238 tol=3.73
2024-12-06 10:23:25,764 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.5 pTM=0.322 ipTM=0.236 tol=2.6
2024-12-06 10:26:00,411 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.2 pTM=0.321 ipTM=0.235 tol=7.86
2024-12-06 10:28:35,141 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.8 pTM=0.324 ipTM=0.235 tol=7.44
2024-12-06 10:31:09,803 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.8 pTM=0.325 ipTM=0.233 tol=3.7
2024-12-06 10:33:44,464 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51.3 pTM=0.323 ipTM=0.233 tol=4.35
2024-12-06 10:36:19,149 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51.7 pTM=0.325 ipTM=0.234 tol=2.79
2024-12-06 10:38:53,818 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.6 pTM=0.325 ipTM=0.234 tol=7.02
2024-12-06 10:41:28,490 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.8 pTM=0.327 ipTM=0.233 tol=8.73
2024-12-06 10:44:03,171 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.8 pTM=0.326 ipTM=0.233 tol=6.54
2024-12-06 10:46:37,873 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=51.8 pTM=0.326 ipTM=0.233 tol=10.8
2024-12-06 10:49:12,539 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.8 pTM=0.327 ipTM=0.231 tol=9.85
2024-12-06 10:51:47,193 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.5 pTM=0.327 ipTM=0.229 tol=10.6
2024-12-06 10:54:21,873 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.7 pTM=0.326 ipTM=0.231 tol=5.26
2024-12-06 10:56:56,551 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.8 pTM=0.326 ipTM=0.232 tol=8.79
2024-12-06 10:59:31,243 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51.7 pTM=0.328 ipTM=0.23 tol=8.38
2024-12-06 10:59:31,245 alphafold2_multimer_v3_model_1_seed_000 took 4949.0s (30 recycles)
2024-12-06 11:02:08,342 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.4 pTM=0.36 ipTM=0.229
2024-12-06 11:04:43,204 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53 pTM=0.354 ipTM=0.216 tol=21
2024-12-06 11:07:18,020 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.5 pTM=0.345 ipTM=0.211 tol=13.9
2024-12-06 11:09:52,783 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.4 pTM=0.345 ipTM=0.211 tol=11.5
2024-12-06 11:12:27,572 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.6 pTM=0.346 ipTM=0.211 tol=11.5
2024-12-06 11:15:02,342 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.9 pTM=0.342 ipTM=0.212 tol=7.74
2024-12-06 11:17:37,138 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.9 pTM=0.34 ipTM=0.213 tol=6.27
2024-12-06 11:20:11,934 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.1 pTM=0.341 ipTM=0.214 tol=7.09
2024-12-06 11:22:46,809 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54 pTM=0.34 ipTM=0.214 tol=6.36
2024-12-06 11:25:21,618 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54 pTM=0.344 ipTM=0.279 tol=7.34
2024-12-06 11:27:56,456 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.2 pTM=0.34 ipTM=0.216 tol=6.82
2024-12-06 11:30:31,298 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.3 pTM=0.34 ipTM=0.216 tol=8.71
2024-12-06 11:33:06,050 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.2 pTM=0.343 ipTM=0.255 tol=8.34
2024-12-06 11:35:40,902 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.1 pTM=0.339 ipTM=0.219 tol=9.08
2024-12-06 11:38:15,730 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.3 pTM=0.339 ipTM=0.213 tol=10.1
2024-12-06 11:40:50,542 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54 pTM=0.34 ipTM=0.22 tol=9.58
2024-12-06 11:43:25,377 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.1 pTM=0.341 ipTM=0.213 tol=8.76
2024-12-06 11:46:00,215 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.3 pTM=0.339 ipTM=0.211 tol=7.92
2024-12-06 11:48:35,025 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.2 pTM=0.339 ipTM=0.212 tol=8.73
2024-12-06 11:51:09,888 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.2 pTM=0.339 ipTM=0.212 tol=5.91
2024-12-06 11:53:44,683 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.1 pTM=0.338 ipTM=0.215 tol=7.09
2024-12-06 11:56:19,495 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.3 pTM=0.339 ipTM=0.218 tol=5.84
2024-12-06 11:58:54,272 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.3 pTM=0.339 ipTM=0.219 tol=3.77
2024-12-06 12:01:29,118 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.3 pTM=0.339 ipTM=0.218 tol=3.41
2024-12-06 12:04:03,973 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.2 pTM=0.339 ipTM=0.218 tol=2.74
2024-12-06 12:06:38,799 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.1 pTM=0.339 ipTM=0.219 tol=2.96
2024-12-06 12:09:13,623 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.3 pTM=0.34 ipTM=0.217 tol=3.07
2024-12-06 12:11:48,412 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.1 pTM=0.34 ipTM=0.219 tol=4.21
2024-12-06 12:14:23,246 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.2 pTM=0.339 ipTM=0.219 tol=3.32
2024-12-06 12:16:58,016 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.4 pTM=0.34 ipTM=0.22 tol=2.62
2024-12-06 12:19:32,790 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.2 pTM=0.34 ipTM=0.219 tol=2.71
2024-12-06 12:19:32,792 alphafold2_multimer_v3_model_2_seed_000 took 4799.3s (30 recycles)
2024-12-06 12:22:10,225 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51 pTM=0.353 ipTM=0.222
2024-12-06 12:24:45,293 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.7 pTM=0.391 ipTM=0.211 tol=22.1
2024-12-06 12:27:20,289 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54 pTM=0.375 ipTM=0.215 tol=16.4
2024-12-06 12:29:55,349 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.1 pTM=0.38 ipTM=0.214 tol=12.5
2024-12-06 12:32:30,486 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.2 pTM=0.368 ipTM=0.217 tol=10.1
2024-12-06 12:35:05,628 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.9 pTM=0.362 ipTM=0.21 tol=19.2
2024-12-06 12:37:40,775 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.3 pTM=0.368 ipTM=0.218 tol=14.1
2024-12-06 12:40:15,882 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.3 pTM=0.367 ipTM=0.219 tol=9.07
2024-12-06 12:42:50,980 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.3 pTM=0.374 ipTM=0.226 tol=7.36
2024-12-06 12:45:26,103 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.3 pTM=0.367 ipTM=0.221 tol=5.99
2024-12-06 12:48:01,218 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.4 pTM=0.367 ipTM=0.223 tol=6.42
2024-12-06 12:50:36,337 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.5 pTM=0.369 ipTM=0.224 tol=7.24
2024-12-06 12:53:11,438 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.3 pTM=0.368 ipTM=0.225 tol=8.55
2024-12-06 12:55:46,514 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.3 pTM=0.366 ipTM=0.226 tol=5.33
2024-12-06 12:58:21,623 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.2 pTM=0.363 ipTM=0.226 tol=4.16
2024-12-06 13:00:56,727 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.3 pTM=0.363 ipTM=0.225 tol=7.38
2024-12-06 13:03:31,795 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.3 pTM=0.362 ipTM=0.228 tol=6.02
2024-12-06 13:06:06,950 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.9 pTM=0.36 ipTM=0.224 tol=4.79
2024-12-06 13:08:42,042 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.3 pTM=0.361 ipTM=0.226 tol=8.59
2024-12-06 13:11:17,115 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.9 pTM=0.367 ipTM=0.242 tol=9.67
2024-12-06 13:13:52,253 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54 pTM=0.36 ipTM=0.231 tol=6.59
2024-12-06 13:16:27,345 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54 pTM=0.362 ipTM=0.226 tol=10.2
2024-12-06 13:19:02,381 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.9 pTM=0.363 ipTM=0.226 tol=7.6
2024-12-06 13:21:37,367 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.1 pTM=0.372 ipTM=0.257 tol=8.09
2024-12-06 13:24:12,447 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.1 pTM=0.365 ipTM=0.223 tol=8.82
2024-12-06 13:26:47,573 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.1 pTM=0.361 ipTM=0.235 tol=5.43
2024-12-06 13:29:22,764 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.3 pTM=0.358 ipTM=0.23 tol=5.84
2024-12-06 13:31:57,964 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.7 pTM=0.358 ipTM=0.23 tol=7.53
2024-12-06 13:34:33,148 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.8 pTM=0.361 ipTM=0.223 tol=11.6
2024-12-06 13:37:08,290 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.3 pTM=0.365 ipTM=0.225 tol=7.03
2024-12-06 13:39:43,416 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.3 pTM=0.36 ipTM=0.231 tol=5.05
2024-12-06 13:39:43,418 alphafold2_multimer_v3_model_3_seed_000 took 4808.3s (30 recycles)
2024-12-06 13:42:20,892 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=50.9 pTM=0.366 ipTM=0.355
2024-12-06 13:44:55,803 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.4 pTM=0.41 ipTM=0.466 tol=20.3
2024-12-06 13:47:30,573 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=54.6 pTM=0.456 ipTM=0.499 tol=12
2024-12-06 13:50:05,357 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.7 pTM=0.414 ipTM=0.31 tol=9.81
2024-12-06 13:52:40,559 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.7 pTM=0.383 ipTM=0.247 tol=10.5
2024-12-06 13:55:15,760 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.3 pTM=0.38 ipTM=0.239 tol=11.7
2024-12-06 13:57:50,920 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.7 pTM=0.382 ipTM=0.248 tol=15.8
2024-12-06 14:00:26,059 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.2 pTM=0.386 ipTM=0.237 tol=13.8
2024-12-06 14:03:01,186 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.7 pTM=0.385 ipTM=0.252 tol=9.52
2024-12-06 14:05:36,286 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.4 pTM=0.387 ipTM=0.243 tol=8.88
2024-12-06 14:08:11,362 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.9 pTM=0.386 ipTM=0.24 tol=8.87
2024-12-06 14:10:46,318 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.4 pTM=0.39 ipTM=0.245 tol=11.3
2024-12-06 14:13:21,365 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53 pTM=0.383 ipTM=0.245 tol=11.2
2024-12-06 14:15:56,328 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.7 pTM=0.386 ipTM=0.267 tol=9.47
2024-12-06 14:18:31,492 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.9 pTM=0.383 ipTM=0.238 tol=9.73
2024-12-06 14:21:06,580 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.2 pTM=0.385 ipTM=0.257 tol=9.33
2024-12-06 14:23:41,632 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.1 pTM=0.383 ipTM=0.253 tol=9.66
2024-12-06 14:26:16,566 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.4 pTM=0.396 ipTM=0.268 tol=7.52
2024-12-06 14:28:51,639 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.2 pTM=0.387 ipTM=0.243 tol=9.23
2024-12-06 14:31:26,657 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.6 pTM=0.386 ipTM=0.236 tol=9.38
2024-12-06 14:34:01,784 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.9 pTM=0.379 ipTM=0.237 tol=9.65
2024-12-06 14:36:36,831 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.7 pTM=0.386 ipTM=0.234 tol=11
2024-12-06 14:39:11,987 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.8 pTM=0.375 ipTM=0.239 tol=11.3
2024-12-06 14:41:47,060 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.4 pTM=0.383 ipTM=0.238 tol=10.1
2024-12-06 14:44:22,098 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.2 pTM=0.383 ipTM=0.236 tol=10.6
2024-12-06 14:46:57,019 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.5 pTM=0.388 ipTM=0.247 tol=7.66
2024-12-06 14:49:32,022 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.9 pTM=0.385 ipTM=0.234 tol=5.55
2024-12-06 14:52:07,100 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.3 pTM=0.386 ipTM=0.236 tol=7.06
2024-12-06 14:54:42,126 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53 pTM=0.386 ipTM=0.235 tol=7.98
2024-12-06 14:57:17,108 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.9 pTM=0.388 ipTM=0.239 tol=10.3
2024-12-06 14:59:52,135 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.3 pTM=0.382 ipTM=0.231 tol=9.79
2024-12-06 14:59:52,137 alphafold2_multimer_v3_model_4_seed_000 took 4806.4s (30 recycles)
2024-12-06 15:02:29,411 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.2 pTM=0.342 ipTM=0.226
2024-12-06 15:05:04,436 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.3 pTM=0.342 ipTM=0.21 tol=21.8
2024-12-06 15:07:39,375 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.4 pTM=0.379 ipTM=0.21 tol=16.3
2024-12-06 15:10:14,261 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.3 pTM=0.377 ipTM=0.215 tol=9.78
2024-12-06 15:12:49,118 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.5 pTM=0.385 ipTM=0.22 tol=8.39
2024-12-06 15:15:24,000 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.8 pTM=0.382 ipTM=0.217 tol=5.79
2024-12-06 15:17:58,801 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.6 pTM=0.382 ipTM=0.218 tol=6.77
2024-12-06 15:20:33,648 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.8 pTM=0.386 ipTM=0.218 tol=9.11
2024-12-06 15:23:08,475 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.8 pTM=0.388 ipTM=0.219 tol=6.16
2024-12-06 15:25:43,345 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.8 pTM=0.384 ipTM=0.22 tol=7.38
2024-12-06 15:28:18,158 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.8 pTM=0.391 ipTM=0.223 tol=8.06
2024-12-06 15:30:52,938 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.7 pTM=0.387 ipTM=0.219 tol=10.8
2024-12-06 15:33:27,718 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.8 pTM=0.384 ipTM=0.219 tol=11.1
2024-12-06 15:36:02,492 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.9 pTM=0.386 ipTM=0.22 tol=9.22
2024-12-06 15:38:37,252 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.8 pTM=0.389 ipTM=0.222 tol=5.05
2024-12-06 15:41:12,096 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.9 pTM=0.383 ipTM=0.217 tol=6.78
2024-12-06 15:43:46,960 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.8 pTM=0.384 ipTM=0.218 tol=5.79
2024-12-06 15:46:21,832 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.7 pTM=0.38 ipTM=0.219 tol=6.43
2024-12-06 15:48:56,652 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.9 pTM=0.385 ipTM=0.22 tol=6.04
2024-12-06 15:51:31,475 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.8 pTM=0.382 ipTM=0.218 tol=6.36
2024-12-06 15:54:06,339 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.7 pTM=0.383 ipTM=0.22 tol=9.35
2024-12-06 15:56:41,194 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.9 pTM=0.381 ipTM=0.218 tol=9.98
2024-12-06 15:59:16,038 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.7 pTM=0.38 ipTM=0.22 tol=5.27
2024-12-06 16:01:50,879 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.9 pTM=0.382 ipTM=0.219 tol=10.6
2024-12-06 16:04:25,678 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.8 pTM=0.386 ipTM=0.221 tol=8.22
2024-12-06 16:07:00,503 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.9 pTM=0.383 ipTM=0.221 tol=8.66
2024-12-06 16:09:35,315 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.9 pTM=0.381 ipTM=0.22 tol=6.96
2024-12-06 16:12:10,152 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54 pTM=0.381 ipTM=0.218 tol=7.72
2024-12-06 16:14:44,961 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.8 pTM=0.386 ipTM=0.222 tol=9.77
2024-12-06 16:17:19,757 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54 pTM=0.381 ipTM=0.218 tol=5.18
2024-12-06 16:19:54,617 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.9 pTM=0.383 ipTM=0.222 tol=5.36
2024-12-06 16:19:54,619 alphafold2_multimer_v3_model_5_seed_000 took 4800.2s (30 recycles)
2024-12-06 16:19:56,915 reranking models by 'multimer' metric
2024-12-06 16:20:01,180 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 16:25:07,871 Relaxation took 311.0s
2024-12-06 16:25:07,871 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.3 pTM=0.382 ipTM=0.231
2024-12-06 16:32:01,299 Relaxation took 413.4s
2024-12-06 16:32:01,299 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.3 pTM=0.36 ipTM=0.231
2024-12-06 16:40:25,087 Relaxation took 503.8s
2024-12-06 16:40:25,087 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.9 pTM=0.383 ipTM=0.222
2024-12-06 17:17:23,047 Relaxation took 2218.0s
2024-12-06 17:17:23,047 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51.7 pTM=0.328 ipTM=0.23
2024-12-06 17:22:43,340 Relaxation took 320.3s
2024-12-06 17:22:43,340 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.2 pTM=0.34 ipTM=0.219
2024-12-06 17:22:48,488 Done