2024-12-06 09:31:18,197 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 09:31:18,526 Running on GPU
2024-12-06 09:31:21,032 Found 6 citations for tools or databases
2024-12-06 09:31:21,033 Query 1/1: HECW2_SPG20 (length 2238)
2024-12-06 09:31:21,308 Sleeping for 10s. Reason: PENDING
2024-12-06 09:31:31,570 Sleeping for 8s. Reason: RUNNING
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2024-12-06 09:33:20,196 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:33:29,455 Sleeping for 5s. Reason: RUNNING
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2024-12-06 09:33:41,966 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:33:47,219 Sleeping for 7s. Reason: RUNNING
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2024-12-06 09:34:01,737 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:34:06,992 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:34:17,255 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:34:29,577 Sleeping for 8s. Reason: PENDING
2024-12-06 09:34:37,834 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:34:45,087 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:34:55,368 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:35:05,646 Sleeping for 5s. Reason: RUNNING
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2024-12-06 09:35:19,163 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:35:25,421 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:35:32,678 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:35:39,950 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:35:46,212 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:35:56,471 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:36:05,733 Sleeping for 6s. Reason: RUNNING
2024-12-06 09:36:12,004 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:36:17,262 Sleeping for 5s. Reason: RUNNING
2024-12-06 09:36:22,521 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:36:32,779 Sleeping for 8s. Reason: RUNNING
2024-12-06 09:36:41,039 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:36:48,294 Sleeping for 9s. Reason: RUNNING
2024-12-06 09:36:57,551 Sleeping for 7s. Reason: RUNNING
2024-12-06 09:37:04,806 Sleeping for 10s. Reason: RUNNING
2024-12-06 09:37:22,353 Setting max_seq=508, max_extra_seq=2048
2024-12-06 09:43:43,314 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=43.7 pTM=0.333 ipTM=0.214
2024-12-06 09:47:14,518 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43.3 pTM=0.333 ipTM=0.22 tol=20
2024-12-06 09:50:45,772 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=44.1 pTM=0.327 ipTM=0.22 tol=12.4
2024-12-06 09:54:17,058 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=43.8 pTM=0.328 ipTM=0.22 tol=11.3
2024-12-06 09:57:48,411 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=43.7 pTM=0.326 ipTM=0.222 tol=7.62
2024-12-06 10:01:19,798 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=43.6 pTM=0.328 ipTM=0.222 tol=6.82
2024-12-06 10:04:51,165 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=43.7 pTM=0.326 ipTM=0.221 tol=7.42
2024-12-06 10:08:22,537 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=43.7 pTM=0.326 ipTM=0.221 tol=5.9
2024-12-06 10:11:53,877 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44 pTM=0.325 ipTM=0.22 tol=10
2024-12-06 10:15:25,211 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=43.7 pTM=0.328 ipTM=0.22 tol=11.2
2024-12-06 10:18:56,581 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=43.8 pTM=0.325 ipTM=0.221 tol=6.96
2024-12-06 10:22:27,970 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=43.9 pTM=0.326 ipTM=0.222 tol=10.5
2024-12-06 10:25:59,353 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=43.9 pTM=0.327 ipTM=0.222 tol=12.7
2024-12-06 10:29:30,787 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=43.9 pTM=0.325 ipTM=0.219 tol=6
2024-12-06 10:33:02,172 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=44.1 pTM=0.326 ipTM=0.222 tol=5.36
2024-12-06 10:36:33,547 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=44.1 pTM=0.328 ipTM=0.223 tol=8.65
2024-12-06 10:40:04,941 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=44.2 pTM=0.327 ipTM=0.221 tol=6.31
2024-12-06 10:43:36,280 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=44.1 pTM=0.331 ipTM=0.223 tol=12.3
2024-12-06 10:47:07,695 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=44.1 pTM=0.327 ipTM=0.221 tol=6.86
2024-12-06 10:50:39,090 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=44.3 pTM=0.329 ipTM=0.221 tol=10.5
2024-12-06 10:54:10,503 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=44.4 pTM=0.326 ipTM=0.22 tol=9
2024-12-06 10:57:41,955 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=44.2 pTM=0.326 ipTM=0.221 tol=6.22
2024-12-06 11:01:13,267 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=43.9 pTM=0.327 ipTM=0.221 tol=15.7
2024-12-06 11:04:44,614 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=43.8 pTM=0.329 ipTM=0.224 tol=12.4
2024-12-06 11:08:15,975 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=44.2 pTM=0.326 ipTM=0.222 tol=9.97
2024-12-06 11:11:47,451 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=44.4 pTM=0.327 ipTM=0.222 tol=3.59
2024-12-06 11:15:18,915 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=44.1 pTM=0.326 ipTM=0.223 tol=9.51
2024-12-06 11:18:50,422 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=44.1 pTM=0.326 ipTM=0.222 tol=8.61
2024-12-06 11:22:22,018 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=44.2 pTM=0.326 ipTM=0.222 tol=11.7
2024-12-06 11:25:53,528 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=44.2 pTM=0.327 ipTM=0.222 tol=11.9
2024-12-06 11:29:24,914 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=44.3 pTM=0.326 ipTM=0.22 tol=8.7
2024-12-06 11:29:24,917 alphafold2_multimer_v3_model_1_seed_000 took 6718.0s (30 recycles)
2024-12-06 11:32:59,345 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.5 pTM=0.338 ipTM=0.215
2024-12-06 11:36:30,970 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=47.5 pTM=0.35 ipTM=0.216 tol=17.4
2024-12-06 11:40:02,479 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.4 pTM=0.385 ipTM=0.219 tol=12.4
2024-12-06 11:43:33,900 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.3 pTM=0.37 ipTM=0.218 tol=10.1
2024-12-06 11:47:05,376 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.3 pTM=0.354 ipTM=0.219 tol=6.75
2024-12-06 11:50:36,875 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.2 pTM=0.351 ipTM=0.219 tol=4.82
2024-12-06 11:54:08,372 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.2 pTM=0.354 ipTM=0.219 tol=5.96
2024-12-06 11:57:39,916 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.3 pTM=0.354 ipTM=0.221 tol=5.82
2024-12-06 12:01:11,411 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.5 pTM=0.352 ipTM=0.22 tol=4.71
2024-12-06 12:04:42,932 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.3 pTM=0.354 ipTM=0.222 tol=5.69
2024-12-06 12:08:14,421 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.8 pTM=0.347 ipTM=0.22 tol=4.96
2024-12-06 12:11:45,968 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48 pTM=0.345 ipTM=0.221 tol=5.53
2024-12-06 12:15:17,497 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.9 pTM=0.345 ipTM=0.22 tol=5.96
2024-12-06 12:18:49,060 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.5 pTM=0.347 ipTM=0.231 tol=5.57
2024-12-06 12:22:20,614 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49 pTM=0.349 ipTM=0.256 tol=9.08
2024-12-06 12:25:52,160 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.8 pTM=0.347 ipTM=0.273 tol=5.89
2024-12-06 12:29:23,678 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.9 pTM=0.344 ipTM=0.275 tol=4
2024-12-06 12:32:55,234 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.9 pTM=0.343 ipTM=0.277 tol=2.79
2024-12-06 12:36:26,773 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.2 pTM=0.344 ipTM=0.277 tol=2.41
2024-12-06 12:39:58,264 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.2 pTM=0.346 ipTM=0.28 tol=3.98
2024-12-06 12:43:29,715 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.2 pTM=0.348 ipTM=0.279 tol=5.55
2024-12-06 12:47:01,182 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.2 pTM=0.345 ipTM=0.277 tol=4.23
2024-12-06 12:50:32,713 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.8 pTM=0.342 ipTM=0.276 tol=4.58
2024-12-06 12:54:04,196 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49 pTM=0.343 ipTM=0.278 tol=2.71
2024-12-06 12:57:35,679 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.8 pTM=0.342 ipTM=0.279 tol=1.94
2024-12-06 13:01:07,110 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=49.1 pTM=0.344 ipTM=0.279 tol=3.1
2024-12-06 13:04:38,584 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.2 pTM=0.344 ipTM=0.279 tol=3.25
2024-12-06 13:08:10,065 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.1 pTM=0.342 ipTM=0.278 tol=3.1
2024-12-06 13:11:41,574 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.9 pTM=0.341 ipTM=0.279 tol=2.35
2024-12-06 13:15:13,090 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.3 pTM=0.341 ipTM=0.283 tol=2.49
2024-12-06 13:18:44,495 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49 pTM=0.34 ipTM=0.283 tol=1.57
2024-12-06 13:18:44,497 alphafold2_multimer_v3_model_2_seed_000 took 6556.7s (30 recycles)
2024-12-06 13:22:19,530 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=44.6 pTM=0.329 ipTM=0.218
2024-12-06 13:25:51,496 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.9 pTM=0.356 ipTM=0.223 tol=17.9
2024-12-06 13:29:23,412 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.2 pTM=0.381 ipTM=0.217 tol=17
2024-12-06 13:32:55,238 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48 pTM=0.398 ipTM=0.223 tol=13.3
2024-12-06 13:36:26,989 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.4 pTM=0.391 ipTM=0.24 tol=9.51
2024-12-06 13:39:58,583 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.8 pTM=0.4 ipTM=0.27 tol=5.62
2024-12-06 13:43:30,134 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.1 pTM=0.419 ipTM=0.271 tol=4.09
2024-12-06 13:47:01,676 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.1 pTM=0.411 ipTM=0.278 tol=5.46
2024-12-06 13:50:33,275 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49 pTM=0.407 ipTM=0.279 tol=4.39
2024-12-06 13:54:04,817 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49 pTM=0.413 ipTM=0.303 tol=3.7
2024-12-06 13:57:36,359 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.1 pTM=0.409 ipTM=0.3 tol=2.66
2024-12-06 14:01:07,878 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.9 pTM=0.41 ipTM=0.304 tol=3.46
2024-12-06 14:04:39,344 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49 pTM=0.409 ipTM=0.309 tol=2.75
2024-12-06 14:08:10,703 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49 pTM=0.407 ipTM=0.306 tol=2.93
2024-12-06 14:11:42,123 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.2 pTM=0.411 ipTM=0.313 tol=2.75
2024-12-06 14:15:13,515 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49 pTM=0.416 ipTM=0.323 tol=2.45
2024-12-06 14:18:44,908 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.5 pTM=0.426 ipTM=0.339 tol=2.83
2024-12-06 14:22:16,267 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.2 pTM=0.419 ipTM=0.336 tol=4.62
2024-12-06 14:25:47,613 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.3 pTM=0.422 ipTM=0.337 tol=5.56
2024-12-06 14:29:18,996 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.3 pTM=0.422 ipTM=0.335 tol=6.91
2024-12-06 14:32:50,375 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.2 pTM=0.426 ipTM=0.335 tol=9.24
2024-12-06 14:36:21,857 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.5 pTM=0.431 ipTM=0.345 tol=4.54
2024-12-06 14:39:53,334 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49.8 pTM=0.438 ipTM=0.37 tol=5.04
2024-12-06 14:43:24,898 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.2 pTM=0.446 ipTM=0.386 tol=5.09
2024-12-06 14:46:56,378 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.9 pTM=0.446 ipTM=0.391 tol=5.11
2024-12-06 14:50:27,874 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.1 pTM=0.447 ipTM=0.393 tol=6.28
2024-12-06 14:53:59,346 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50 pTM=0.449 ipTM=0.401 tol=8.54
2024-12-06 14:57:30,822 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.9 pTM=0.448 ipTM=0.401 tol=9.09
2024-12-06 15:01:02,265 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.1 pTM=0.455 ipTM=0.413 tol=4.27
2024-12-06 15:04:33,659 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.2 pTM=0.456 ipTM=0.417 tol=5.04
2024-12-06 15:08:05,064 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50 pTM=0.452 ipTM=0.412 tol=5.01
2024-12-06 15:08:05,066 alphafold2_multimer_v3_model_3_seed_000 took 6557.7s (30 recycles)
2024-12-06 15:11:40,271 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=42.8 pTM=0.337 ipTM=0.227
2024-12-06 15:15:12,593 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=43.6 pTM=0.34 ipTM=0.242 tol=20.3
2024-12-06 15:18:44,698 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=43.6 pTM=0.364 ipTM=0.247 tol=14.1
2024-12-06 15:22:16,873 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.2 pTM=0.353 ipTM=0.254 tol=10.6
2024-12-06 15:25:48,976 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=43.5 pTM=0.364 ipTM=0.266 tol=11.6
2024-12-06 15:29:21,070 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=43.2 pTM=0.356 ipTM=0.25 tol=11.2
2024-12-06 15:32:53,183 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=43.2 pTM=0.36 ipTM=0.255 tol=12.3
2024-12-06 15:36:25,398 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=43.2 pTM=0.348 ipTM=0.247 tol=12.7
2024-12-06 15:39:57,534 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=43.2 pTM=0.354 ipTM=0.248 tol=14.6
2024-12-06 15:43:29,671 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=42.9 pTM=0.345 ipTM=0.247 tol=11.9
2024-12-06 15:47:01,797 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=43.2 pTM=0.361 ipTM=0.244 tol=8.38
2024-12-06 15:50:33,929 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=42.8 pTM=0.351 ipTM=0.246 tol=8.18
2024-12-06 15:54:06,025 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=43.3 pTM=0.362 ipTM=0.254 tol=7.25
2024-12-06 15:57:38,075 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=43 pTM=0.357 ipTM=0.254 tol=5.68
2024-12-06 16:01:10,201 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=42.9 pTM=0.36 ipTM=0.247 tol=7.89
2024-12-06 16:04:42,323 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=42.8 pTM=0.35 ipTM=0.249 tol=6.04
2024-12-06 16:08:14,432 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43.1 pTM=0.357 ipTM=0.251 tol=7.33
2024-12-06 16:11:46,538 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.1 pTM=0.356 ipTM=0.254 tol=4.96
2024-12-06 16:15:18,611 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.2 pTM=0.359 ipTM=0.243 tol=6.41
2024-12-06 16:18:50,789 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.2 pTM=0.356 ipTM=0.245 tol=5.02
2024-12-06 16:22:22,812 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43 pTM=0.36 ipTM=0.244 tol=13.1
2024-12-06 16:25:54,825 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=42.8 pTM=0.358 ipTM=0.244 tol=5.64
2024-12-06 16:29:26,863 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42.6 pTM=0.352 ipTM=0.235 tol=6.74
2024-12-06 16:32:58,861 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42.9 pTM=0.364 ipTM=0.242 tol=5.62
2024-12-06 16:36:30,812 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=42.9 pTM=0.355 ipTM=0.238 tol=7.04
2024-12-06 16:40:02,710 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=42.7 pTM=0.36 ipTM=0.25 tol=7.44
2024-12-06 16:43:34,724 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=42.6 pTM=0.349 ipTM=0.246 tol=9.62
2024-12-06 16:47:06,827 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=42.5 pTM=0.349 ipTM=0.244 tol=8.9
2024-12-06 16:50:38,956 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=42.6 pTM=0.352 ipTM=0.236 tol=7.09
2024-12-06 16:54:10,942 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=42.8 pTM=0.358 ipTM=0.25 tol=9.55
2024-12-06 16:57:42,911 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=42.9 pTM=0.362 ipTM=0.25 tol=10.2
2024-12-06 16:57:42,913 alphafold2_multimer_v3_model_4_seed_000 took 6575.0s (30 recycles)
2024-12-06 17:01:18,091 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=42.5 pTM=0.331 ipTM=0.214
2024-12-06 17:04:50,257 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.3 pTM=0.355 ipTM=0.225 tol=19.3
2024-12-06 17:08:22,268 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.5 pTM=0.381 ipTM=0.23 tol=15.3
2024-12-06 17:11:54,323 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=45.6 pTM=0.363 ipTM=0.217 tol=15.3
2024-12-06 17:15:26,376 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.1 pTM=0.364 ipTM=0.217 tol=10.1
2024-12-06 17:18:58,416 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.1 pTM=0.366 ipTM=0.213 tol=11.4
2024-12-06 17:22:30,425 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.3 pTM=0.368 ipTM=0.212 tol=12
2024-12-06 17:26:02,437 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.3 pTM=0.365 ipTM=0.21 tol=11.9
2024-12-06 17:29:34,461 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.3 pTM=0.361 ipTM=0.21 tol=13.3
2024-12-06 17:33:06,427 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.5 pTM=0.376 ipTM=0.214 tol=11.9
2024-12-06 17:36:38,446 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.2 pTM=0.362 ipTM=0.213 tol=12.1
2024-12-06 17:40:10,432 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.4 pTM=0.365 ipTM=0.212 tol=10.1
2024-12-06 17:43:42,443 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.2 pTM=0.358 ipTM=0.213 tol=7.89
2024-12-06 17:47:14,415 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.5 pTM=0.359 ipTM=0.21 tol=4.36
2024-12-06 17:50:46,381 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.6 pTM=0.363 ipTM=0.218 tol=11.2
2024-12-06 17:54:18,356 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46 pTM=0.361 ipTM=0.21 tol=8.7
2024-12-06 17:57:50,342 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.1 pTM=0.357 ipTM=0.216 tol=10.7
2024-12-06 18:01:22,309 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.4 pTM=0.363 ipTM=0.213 tol=9.42
2024-12-06 18:04:54,328 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.4 pTM=0.362 ipTM=0.214 tol=13.1
2024-12-06 18:08:26,341 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.5 pTM=0.357 ipTM=0.209 tol=9.34
2024-12-06 18:11:58,334 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.2 pTM=0.356 ipTM=0.212 tol=8.86
2024-12-06 18:15:30,328 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.6 pTM=0.355 ipTM=0.209 tol=10.9
2024-12-06 18:19:02,350 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.2 pTM=0.353 ipTM=0.21 tol=5.03
2024-12-06 18:22:34,290 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.4 pTM=0.359 ipTM=0.211 tol=6.23
2024-12-06 18:26:06,288 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46 pTM=0.352 ipTM=0.215 tol=9.12
2024-12-06 18:29:38,248 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=46.4 pTM=0.356 ipTM=0.212 tol=5.74
2024-12-06 18:33:10,148 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=46.3 pTM=0.359 ipTM=0.214 tol=9.47
2024-12-06 18:36:42,155 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46.3 pTM=0.357 ipTM=0.21 tol=9.94
2024-12-06 18:40:14,165 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46.2 pTM=0.359 ipTM=0.211 tol=5.3
2024-12-06 18:43:46,210 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.5 pTM=0.357 ipTM=0.211 tol=6.52
2024-12-06 18:47:18,193 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.3 pTM=0.356 ipTM=0.215 tol=5.75
2024-12-06 18:47:18,196 alphafold2_multimer_v3_model_5_seed_000 took 6572.4s (30 recycles)
2024-12-06 18:47:21,074 reranking models by 'multimer' metric
2024-12-06 18:47:24,472 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 18:56:57,804 Relaxation took 576.7s
2024-12-06 18:56:57,804 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50 pTM=0.452 ipTM=0.412
2024-12-06 19:03:34,462 Relaxation took 396.7s
2024-12-06 19:03:34,462 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49 pTM=0.34 ipTM=0.283
2024-12-06 19:12:36,204 Relaxation took 541.7s
2024-12-06 19:12:36,204 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=42.9 pTM=0.362 ipTM=0.25
2024-12-06 19:19:25,342 Relaxation took 409.1s
2024-12-06 19:19:25,342 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.3 pTM=0.356 ipTM=0.215
2024-12-06 19:27:54,890 Relaxation took 509.5s
2024-12-06 19:27:54,890 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=44.3 pTM=0.326 ipTM=0.22
2024-12-06 19:28:01,331 Done