2024-12-06 11:32:53,861 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 11:32:54,230 Running on GPU
2024-12-06 11:32:57,949 Found 6 citations for tools or databases
2024-12-06 11:32:57,950 Query 1/1: HERC5_RPL19 (length 1220)
2024-12-06 11:32:58,233 Sleeping for 6s. Reason: PENDING
2024-12-06 11:33:04,492 Sleeping for 8s. Reason: RUNNING
2024-12-06 11:33:12,761 Sleeping for 7s. Reason: RUNNING
2024-12-06 11:33:20,024 Sleeping for 9s. Reason: RUNNING
2024-12-06 11:33:29,282 Sleeping for 9s. Reason: RUNNING
2024-12-06 11:33:38,538 Sleeping for 5s. Reason: RUNNING
2024-12-06 11:33:43,807 Sleeping for 7s. Reason: RUNNING
2024-12-06 11:33:51,064 Sleeping for 8s. Reason: RUNNING
2024-12-06 11:33:59,329 Sleeping for 7s. Reason: RUNNING
2024-12-06 11:34:06,587 Sleeping for 8s. Reason: RUNNING
2024-12-06 11:34:14,848 Sleeping for 7s. Reason: RUNNING
2024-12-06 11:34:22,105 Sleeping for 9s. Reason: RUNNING
2024-12-06 11:34:31,367 Sleeping for 6s. Reason: RUNNING
2024-12-06 11:34:37,625 Sleeping for 9s. Reason: RUNNING
2024-12-06 11:34:46,888 Sleeping for 8s. Reason: RUNNING
2024-12-06 11:34:55,149 Sleeping for 5s. Reason: RUNNING
2024-12-06 11:35:00,413 Sleeping for 9s. Reason: RUNNING
2024-12-06 11:35:09,672 Sleeping for 8s. Reason: RUNNING
2024-12-06 11:35:17,934 Sleeping for 9s. Reason: RUNNING
2024-12-06 11:35:27,202 Sleeping for 8s. Reason: RUNNING
2024-12-06 11:35:35,466 Sleeping for 5s. Reason: RUNNING
2024-12-06 11:35:40,722 Sleeping for 10s. Reason: RUNNING
2024-12-06 11:35:50,982 Sleeping for 8s. Reason: RUNNING
2024-12-06 11:35:59,240 Sleeping for 7s. Reason: RUNNING
2024-12-06 11:36:06,498 Sleeping for 7s. Reason: RUNNING
2024-12-06 11:36:15,390 Sleeping for 9s. Reason: PENDING
2024-12-06 11:36:24,649 Sleeping for 5s. Reason: RUNNING
2024-12-06 11:36:29,914 Sleeping for 7s. Reason: RUNNING
2024-12-06 11:36:37,169 Sleeping for 8s. Reason: RUNNING
2024-12-06 11:36:45,429 Sleeping for 5s. Reason: RUNNING
2024-12-06 11:36:50,691 Sleeping for 10s. Reason: RUNNING
2024-12-06 11:37:00,953 Sleeping for 5s. Reason: RUNNING
2024-12-06 11:37:06,207 Sleeping for 9s. Reason: RUNNING
2024-12-06 11:37:15,466 Sleeping for 5s. Reason: RUNNING
2024-12-06 11:37:20,721 Sleeping for 8s. Reason: RUNNING
2024-12-06 11:37:28,986 Sleeping for 9s. Reason: RUNNING
2024-12-06 11:37:38,244 Sleeping for 5s. Reason: RUNNING
2024-12-06 11:37:43,506 Sleeping for 8s. Reason: RUNNING
2024-12-06 11:37:51,767 Sleeping for 6s. Reason: RUNNING
2024-12-06 11:37:58,026 Sleeping for 5s. Reason: RUNNING
2024-12-06 11:38:03,286 Sleeping for 10s. Reason: RUNNING
2024-12-06 11:38:20,780 Setting max_seq=508, max_extra_seq=2048
2024-12-06 11:41:41,172 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=79 pTM=0.73 ipTM=0.194
2024-12-06 11:42:19,634 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=80.8 pTM=0.77 ipTM=0.36 tol=10.1
2024-12-06 11:42:58,205 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=81.4 pTM=0.756 ipTM=0.441 tol=6.46
2024-12-06 11:43:36,877 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=81.3 pTM=0.751 ipTM=0.364 tol=1.87
2024-12-06 11:44:15,589 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=81.6 pTM=0.753 ipTM=0.409 tol=1.49
2024-12-06 11:44:54,323 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=81.6 pTM=0.751 ipTM=0.412 tol=1.53
2024-12-06 11:45:33,073 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=81.6 pTM=0.752 ipTM=0.394 tol=1.3
2024-12-06 11:46:11,848 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=81.9 pTM=0.754 ipTM=0.427 tol=0.8
2024-12-06 11:46:50,607 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=81.6 pTM=0.753 ipTM=0.416 tol=0.764
2024-12-06 11:47:29,365 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=81.8 pTM=0.752 ipTM=0.437 tol=0.995
2024-12-06 11:48:08,130 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=81.8 pTM=0.754 ipTM=0.428 tol=0.759
2024-12-06 11:48:46,924 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=81.7 pTM=0.753 ipTM=0.421 tol=0.691
2024-12-06 11:49:25,741 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=81.7 pTM=0.752 ipTM=0.424 tol=0.528
2024-12-06 11:50:04,543 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=81.8 pTM=0.754 ipTM=0.43 tol=0.542
2024-12-06 11:50:43,296 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=81.7 pTM=0.752 ipTM=0.439 tol=0.76
2024-12-06 11:51:22,068 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=81.8 pTM=0.754 ipTM=0.43 tol=0.433
2024-12-06 11:51:22,069 alphafold2_multimer_v3_model_1_seed_000 took 774.2s (15 recycles)
2024-12-06 11:52:02,035 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=79.4 pTM=0.738 ipTM=0.241
2024-12-06 11:52:40,934 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=80.5 pTM=0.753 ipTM=0.243 tol=9.05
2024-12-06 11:53:19,780 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80.7 pTM=0.745 ipTM=0.268 tol=4.82
2024-12-06 11:53:58,627 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=81.1 pTM=0.746 ipTM=0.243 tol=2.89
2024-12-06 11:54:37,460 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.7 pTM=0.742 ipTM=0.232 tol=2.62
2024-12-06 11:55:16,282 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80.4 pTM=0.739 ipTM=0.221 tol=1.19
2024-12-06 11:55:55,110 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.4 pTM=0.741 ipTM=0.221 tol=1.02
2024-12-06 11:56:33,958 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=80.6 pTM=0.741 ipTM=0.215 tol=1.19
2024-12-06 11:57:12,828 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=80.6 pTM=0.743 ipTM=0.211 tol=1.22
2024-12-06 11:57:51,716 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=80.8 pTM=0.741 ipTM=0.212 tol=1.11
2024-12-06 11:58:30,585 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.6 pTM=0.74 ipTM=0.2 tol=0.973
2024-12-06 11:59:09,480 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=80.8 pTM=0.739 ipTM=0.199 tol=2.38
2024-12-06 11:59:48,363 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.4 pTM=0.739 ipTM=0.206 tol=1.98
2024-12-06 12:00:27,241 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=80.4 pTM=0.738 ipTM=0.203 tol=1.06
2024-12-06 12:01:06,127 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.5 pTM=0.74 ipTM=0.206 tol=0.732
2024-12-06 12:01:45,008 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.4 pTM=0.738 ipTM=0.206 tol=0.767
2024-12-06 12:02:23,878 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.5 pTM=0.736 ipTM=0.197 tol=0.44
2024-12-06 12:02:23,879 alphafold2_multimer_v3_model_2_seed_000 took 660.7s (16 recycles)
2024-12-06 12:03:03,821 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78.8 pTM=0.722 ipTM=0.206
2024-12-06 12:03:42,667 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=79.6 pTM=0.739 ipTM=0.195 tol=8.96
2024-12-06 12:04:21,456 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=79.7 pTM=0.73 ipTM=0.206 tol=3.29
2024-12-06 12:05:00,298 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.8 pTM=0.736 ipTM=0.205 tol=2.72
2024-12-06 12:05:39,131 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=80 pTM=0.739 ipTM=0.258 tol=7.38
2024-12-06 12:06:17,941 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=79.4 pTM=0.731 ipTM=0.204 tol=5.05
2024-12-06 12:06:56,786 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=79.6 pTM=0.732 ipTM=0.211 tol=2
2024-12-06 12:07:35,630 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79.8 pTM=0.738 ipTM=0.23 tol=2.88
2024-12-06 12:08:14,494 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.8 pTM=0.735 ipTM=0.213 tol=5.38
2024-12-06 12:08:53,344 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=80.1 pTM=0.737 ipTM=0.224 tol=5.43
2024-12-06 12:09:32,186 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79.9 pTM=0.733 ipTM=0.212 tol=2.39
2024-12-06 12:10:11,039 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79.9 pTM=0.738 ipTM=0.237 tol=2.12
2024-12-06 12:10:49,898 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=79.6 pTM=0.734 ipTM=0.229 tol=1.32
2024-12-06 12:11:28,796 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=79.7 pTM=0.739 ipTM=0.228 tol=2.61
2024-12-06 12:12:07,643 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.4 pTM=0.732 ipTM=0.222 tol=4.56
2024-12-06 12:12:46,538 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.8 pTM=0.741 ipTM=0.241 tol=5.42
2024-12-06 12:13:25,431 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=79.9 pTM=0.739 ipTM=0.226 tol=1.53
2024-12-06 12:14:04,284 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=79.8 pTM=0.74 ipTM=0.244 tol=1.87
2024-12-06 12:14:43,135 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.8 pTM=0.737 ipTM=0.235 tol=0.694
2024-12-06 12:15:21,988 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=79.7 pTM=0.739 ipTM=0.229 tol=3.87
2024-12-06 12:16:00,876 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.7 pTM=0.735 ipTM=0.222 tol=2.11
2024-12-06 12:16:39,792 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=79.6 pTM=0.734 ipTM=0.225 tol=1.98
2024-12-06 12:17:18,656 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=79.2 pTM=0.729 ipTM=0.216 tol=1.82
2024-12-06 12:17:57,531 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=79.8 pTM=0.736 ipTM=0.222 tol=1.44
2024-12-06 12:18:36,367 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=79.6 pTM=0.73 ipTM=0.212 tol=4.96
2024-12-06 12:19:15,207 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=80 pTM=0.739 ipTM=0.228 tol=4.69
2024-12-06 12:19:54,050 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=79.7 pTM=0.729 ipTM=0.214 tol=1.99
2024-12-06 12:20:32,893 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=79.8 pTM=0.733 ipTM=0.229 tol=1.72
2024-12-06 12:21:11,739 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=79.8 pTM=0.733 ipTM=0.217 tol=1.5
2024-12-06 12:21:50,592 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=79.9 pTM=0.74 ipTM=0.243 tol=2.1
2024-12-06 12:22:29,442 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=79.9 pTM=0.733 ipTM=0.22 tol=1.07
2024-12-06 12:22:29,443 alphafold2_multimer_v3_model_3_seed_000 took 1204.4s (30 recycles)
2024-12-06 12:23:09,458 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.8 pTM=0.738 ipTM=0.198
2024-12-06 12:23:48,425 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=78.8 pTM=0.755 ipTM=0.207 tol=4.96
2024-12-06 12:24:27,326 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=78.8 pTM=0.747 ipTM=0.205 tol=3.43
2024-12-06 12:25:06,287 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=79.4 pTM=0.754 ipTM=0.276 tol=5.03
2024-12-06 12:25:45,233 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=80.1 pTM=0.751 ipTM=0.239 tol=2.94
2024-12-06 12:26:24,122 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=79.2 pTM=0.743 ipTM=0.214 tol=4.23
2024-12-06 12:27:02,998 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=79.2 pTM=0.749 ipTM=0.233 tol=4.22
2024-12-06 12:27:41,895 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=79.3 pTM=0.75 ipTM=0.231 tol=1.78
2024-12-06 12:28:20,769 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=79.2 pTM=0.75 ipTM=0.235 tol=2.33
2024-12-06 12:28:59,641 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=79.2 pTM=0.749 ipTM=0.243 tol=3.77
2024-12-06 12:29:38,533 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=79.5 pTM=0.75 ipTM=0.24 tol=1.34
2024-12-06 12:30:17,420 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=79.2 pTM=0.749 ipTM=0.23 tol=4.32
2024-12-06 12:30:56,295 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=79.2 pTM=0.747 ipTM=0.236 tol=3.18
2024-12-06 12:31:35,198 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=79.1 pTM=0.746 ipTM=0.231 tol=2.37
2024-12-06 12:32:14,042 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78.9 pTM=0.747 ipTM=0.232 tol=2.5
2024-12-06 12:32:52,926 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=79 pTM=0.749 ipTM=0.237 tol=2.5
2024-12-06 12:33:31,802 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=79.2 pTM=0.749 ipTM=0.235 tol=2.71
2024-12-06 12:34:10,648 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=79.1 pTM=0.748 ipTM=0.235 tol=1.91
2024-12-06 12:34:49,471 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78.9 pTM=0.747 ipTM=0.235 tol=2.82
2024-12-06 12:35:28,294 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=79.1 pTM=0.751 ipTM=0.248 tol=2.29
2024-12-06 12:36:07,110 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78.9 pTM=0.747 ipTM=0.232 tol=2.47
2024-12-06 12:36:45,894 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=78.9 pTM=0.746 ipTM=0.232 tol=2.14
2024-12-06 12:37:24,649 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=78.7 pTM=0.743 ipTM=0.228 tol=2.12
2024-12-06 12:38:03,459 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=79.1 pTM=0.749 ipTM=0.228 tol=2.51
2024-12-06 12:38:42,263 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=78.9 pTM=0.744 ipTM=0.224 tol=3.03
2024-12-06 12:39:21,094 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=79.1 pTM=0.75 ipTM=0.239 tol=4.75
2024-12-06 12:39:59,892 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=79 pTM=0.745 ipTM=0.232 tol=2.65
2024-12-06 12:40:38,678 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78.9 pTM=0.745 ipTM=0.232 tol=2.26
2024-12-06 12:41:17,469 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=79 pTM=0.746 ipTM=0.227 tol=3.03
2024-12-06 12:41:56,272 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=78.9 pTM=0.748 ipTM=0.231 tol=2.94
2024-12-06 12:42:35,095 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=79.1 pTM=0.749 ipTM=0.231 tol=2.29
2024-12-06 12:42:35,096 alphafold2_multimer_v3_model_4_seed_000 took 1204.5s (30 recycles)
2024-12-06 12:43:15,057 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=77.7 pTM=0.724 ipTM=0.222
2024-12-06 12:43:53,976 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=79.4 pTM=0.741 ipTM=0.195 tol=2.99
2024-12-06 12:44:32,843 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.9 pTM=0.729 ipTM=0.184 tol=2.34
2024-12-06 12:45:11,734 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79.6 pTM=0.733 ipTM=0.207 tol=3.34
2024-12-06 12:45:50,593 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=79.5 pTM=0.729 ipTM=0.18 tol=1.56
2024-12-06 12:46:29,435 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79.4 pTM=0.727 ipTM=0.181 tol=1.5
2024-12-06 12:47:08,300 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.7 pTM=0.729 ipTM=0.215 tol=2.81
2024-12-06 12:47:47,182 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.5 pTM=0.729 ipTM=0.183 tol=2.83
2024-12-06 12:48:26,072 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=79.5 pTM=0.729 ipTM=0.189 tol=1.36
2024-12-06 12:49:04,958 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=79.8 pTM=0.73 ipTM=0.194 tol=1.88
2024-12-06 12:49:43,828 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=79.4 pTM=0.728 ipTM=0.186 tol=1.9
2024-12-06 12:50:22,691 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=79.4 pTM=0.726 ipTM=0.187 tol=0.957
2024-12-06 12:51:01,558 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=79.6 pTM=0.728 ipTM=0.236 tol=1.96
2024-12-06 12:51:40,442 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=79.3 pTM=0.727 ipTM=0.183 tol=1.84
2024-12-06 12:52:19,326 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=79.1 pTM=0.728 ipTM=0.203 tol=0.903
2024-12-06 12:52:58,207 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=79.5 pTM=0.73 ipTM=0.206 tol=1.73
2024-12-06 12:53:37,081 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=79.4 pTM=0.727 ipTM=0.198 tol=1.13
2024-12-06 12:54:15,956 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=79.2 pTM=0.729 ipTM=0.219 tol=0.95
2024-12-06 12:54:54,844 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=79.3 pTM=0.729 ipTM=0.21 tol=1.42
2024-12-06 12:55:33,700 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=79.2 pTM=0.728 ipTM=0.206 tol=1.84
2024-12-06 12:56:12,582 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=79.1 pTM=0.728 ipTM=0.21 tol=0.555
2024-12-06 12:56:51,448 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=79.2 pTM=0.727 ipTM=0.203 tol=1.13
2024-12-06 12:57:30,326 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=79.2 pTM=0.727 ipTM=0.204 tol=0.665
2024-12-06 12:58:09,221 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=79.4 pTM=0.733 ipTM=0.228 tol=1
2024-12-06 12:58:48,101 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=79.4 pTM=0.726 ipTM=0.199 tol=1.1
2024-12-06 12:59:27,002 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=79.4 pTM=0.729 ipTM=0.202 tol=1.4
2024-12-06 13:00:05,897 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=79.4 pTM=0.725 ipTM=0.241 tol=1.44
2024-12-06 13:00:44,797 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=79.5 pTM=0.725 ipTM=0.194 tol=0.968
2024-12-06 13:01:23,710 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=79.2 pTM=0.726 ipTM=0.202 tol=1.34
2024-12-06 13:02:02,600 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=79.4 pTM=0.73 ipTM=0.247 tol=1.17
2024-12-06 13:02:41,482 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=79.3 pTM=0.725 ipTM=0.191 tol=0.937
2024-12-06 13:02:41,483 alphafold2_multimer_v3_model_5_seed_000 took 1205.2s (30 recycles)
2024-12-06 13:02:42,622 reranking models by 'multimer' metric
2024-12-06 13:02:44,115 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 13:05:07,693 Relaxation took 145.1s
2024-12-06 13:05:07,693 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=81.8 pTM=0.754 ipTM=0.43
2024-12-06 13:08:00,452 Relaxation took 172.8s
2024-12-06 13:08:00,452 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=79.1 pTM=0.749 ipTM=0.231
2024-12-06 13:11:18,689 Relaxation took 198.2s
2024-12-06 13:11:18,689 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=79.9 pTM=0.733 ipTM=0.22
2024-12-06 13:15:22,086 Relaxation took 243.4s
2024-12-06 13:15:22,086 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.5 pTM=0.736 ipTM=0.197
2024-12-06 13:19:34,405 Relaxation took 252.3s
2024-12-06 13:19:34,406 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=79.3 pTM=0.725 ipTM=0.191
2024-12-06 13:19:37,329 Done