2024-12-06 12:20:25,178 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 12:20:25,508 Running on GPU
2024-12-06 12:20:30,029 Found 6 citations for tools or databases
2024-12-06 12:20:30,029 Query 1/1: IPP_LANCL1 (length 983)
2024-12-06 12:20:30,513 Sleeping for 8s. Reason: PENDING
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2024-12-06 12:23:01,347 Sleeping for 7s. Reason: PENDING
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2024-12-06 12:24:30,187 Sleeping for 8s. Reason: RUNNING
2024-12-06 12:24:38,440 Sleeping for 9s. Reason: RUNNING
2024-12-06 12:24:47,702 Sleeping for 8s. Reason: RUNNING
2024-12-06 12:24:59,053 Setting max_seq=508, max_extra_seq=2048
2024-12-06 12:27:54,679 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=87.9 pTM=0.545 ipTM=0.265
2024-12-06 12:28:15,200 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=87.4 pTM=0.515 ipTM=0.209 tol=2
2024-12-06 12:28:35,731 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=87.7 pTM=0.512 ipTM=0.215 tol=7.04
2024-12-06 12:28:56,296 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=87.9 pTM=0.518 ipTM=0.221 tol=0.92
2024-12-06 12:29:16,897 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=87.7 pTM=0.519 ipTM=0.237 tol=0.931
2024-12-06 12:29:37,522 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=87.4 pTM=0.51 ipTM=0.205 tol=0.884
2024-12-06 12:29:58,190 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=87.8 pTM=0.514 ipTM=0.221 tol=1.07
2024-12-06 12:30:18,852 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=87.7 pTM=0.534 ipTM=0.271 tol=1.87
2024-12-06 12:30:39,542 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=87.7 pTM=0.512 ipTM=0.207 tol=2.31
2024-12-06 12:31:00,244 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=87.7 pTM=0.511 ipTM=0.215 tol=1.49
2024-12-06 12:31:20,942 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=87.3 pTM=0.51 ipTM=0.209 tol=1.77
2024-12-06 12:31:41,650 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=87.7 pTM=0.513 ipTM=0.223 tol=2.21
2024-12-06 12:32:02,354 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=87.6 pTM=0.509 ipTM=0.203 tol=0.939
2024-12-06 12:32:23,023 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=87.6 pTM=0.515 ipTM=0.224 tol=1.26
2024-12-06 12:32:43,728 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=87.4 pTM=0.511 ipTM=0.209 tol=0.883
2024-12-06 12:33:04,441 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=87.8 pTM=0.513 ipTM=0.219 tol=0.682
2024-12-06 12:33:25,136 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=87.4 pTM=0.509 ipTM=0.201 tol=0.816
2024-12-06 12:33:45,829 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=87.3 pTM=0.515 ipTM=0.221 tol=0.777
2024-12-06 12:34:06,530 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=87.4 pTM=0.519 ipTM=0.234 tol=0.702
2024-12-06 12:34:27,222 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=87.3 pTM=0.512 ipTM=0.221 tol=0.915
2024-12-06 12:34:47,934 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=87.4 pTM=0.512 ipTM=0.215 tol=0.687
2024-12-06 12:35:08,643 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=87.4 pTM=0.512 ipTM=0.209 tol=0.951
2024-12-06 12:35:29,366 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=87.6 pTM=0.523 ipTM=0.242 tol=1.26
2024-12-06 12:35:50,092 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=87.3 pTM=0.508 ipTM=0.198 tol=1.25
2024-12-06 12:36:10,785 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=87.4 pTM=0.51 ipTM=0.211 tol=0.732
2024-12-06 12:36:31,471 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=87.4 pTM=0.514 ipTM=0.219 tol=0.57
2024-12-06 12:36:52,154 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=87.2 pTM=0.512 ipTM=0.209 tol=0.708
2024-12-06 12:37:12,840 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=87.5 pTM=0.521 ipTM=0.24 tol=0.869
2024-12-06 12:37:33,552 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=87.4 pTM=0.512 ipTM=0.212 tol=1.65
2024-12-06 12:37:54,239 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=87.4 pTM=0.511 ipTM=0.215 tol=1.46
2024-12-06 12:38:14,919 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=87.2 pTM=0.513 ipTM=0.211 tol=1.3
2024-12-06 12:38:14,920 alphafold2_multimer_v3_model_1_seed_000 took 790.8s (30 recycles)
2024-12-06 12:38:36,242 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=88.2 pTM=0.595 ipTM=0.398
2024-12-06 12:38:57,005 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=87.9 pTM=0.526 ipTM=0.243 tol=2.44
2024-12-06 12:39:17,730 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=87.9 pTM=0.519 ipTM=0.223 tol=1.01
2024-12-06 12:39:38,428 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=88.4 pTM=0.537 ipTM=0.28 tol=2.34
2024-12-06 12:39:59,157 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=88.1 pTM=0.513 ipTM=0.208 tol=2.3
2024-12-06 12:40:19,854 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=88.2 pTM=0.517 ipTM=0.231 tol=1.02
2024-12-06 12:40:40,586 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=87.8 pTM=0.501 ipTM=0.188 tol=2.24
2024-12-06 12:41:01,277 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=87.9 pTM=0.509 ipTM=0.205 tol=0.604
2024-12-06 12:41:21,993 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=87.9 pTM=0.5 ipTM=0.186 tol=0.558
2024-12-06 12:41:42,706 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=87.9 pTM=0.506 ipTM=0.198 tol=0.723
2024-12-06 12:42:03,416 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=88.1 pTM=0.51 ipTM=0.206 tol=1.99
2024-12-06 12:42:24,125 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=87.9 pTM=0.512 ipTM=0.211 tol=1.3
2024-12-06 12:42:44,848 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=88 pTM=0.502 ipTM=0.189 tol=0.594
2024-12-06 12:43:05,549 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=87.7 pTM=0.508 ipTM=0.2 tol=1.17
2024-12-06 12:43:26,279 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=88.1 pTM=0.508 ipTM=0.2 tol=1.78
2024-12-06 12:43:46,990 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=87.7 pTM=0.509 ipTM=0.206 tol=1.54
2024-12-06 12:44:07,700 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=87.9 pTM=0.504 ipTM=0.194 tol=1.22
2024-12-06 12:44:28,394 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=87.8 pTM=0.512 ipTM=0.208 tol=0.77
2024-12-06 12:44:49,110 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=87.9 pTM=0.507 ipTM=0.198 tol=0.927
2024-12-06 12:45:09,812 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=87.9 pTM=0.51 ipTM=0.208 tol=0.744
2024-12-06 12:45:30,508 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=87.9 pTM=0.504 ipTM=0.195 tol=0.831
2024-12-06 12:45:51,218 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=87.9 pTM=0.511 ipTM=0.207 tol=1.12
2024-12-06 12:46:11,932 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=87.9 pTM=0.512 ipTM=0.208 tol=1.83
2024-12-06 12:46:32,649 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=87.9 pTM=0.517 ipTM=0.218 tol=1.63
2024-12-06 12:46:53,373 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=87.9 pTM=0.508 ipTM=0.201 tol=1.38
2024-12-06 12:47:14,086 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=88 pTM=0.513 ipTM=0.213 tol=0.935
2024-12-06 12:47:34,801 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=87.9 pTM=0.507 ipTM=0.199 tol=0.693
2024-12-06 12:47:55,513 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=87.9 pTM=0.509 ipTM=0.203 tol=1.04
2024-12-06 12:48:16,249 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=88.1 pTM=0.505 ipTM=0.196 tol=0.927
2024-12-06 12:48:36,953 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=87.8 pTM=0.508 ipTM=0.202 tol=1.3
2024-12-06 12:48:57,687 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=87.8 pTM=0.505 ipTM=0.197 tol=1.38
2024-12-06 12:48:57,687 alphafold2_multimer_v3_model_2_seed_000 took 642.2s (30 recycles)
2024-12-06 12:49:19,067 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=88.2 pTM=0.558 ipTM=0.296
2024-12-06 12:49:39,813 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=88.1 pTM=0.535 ipTM=0.26 tol=2.45
2024-12-06 12:50:00,563 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=88.2 pTM=0.542 ipTM=0.293 tol=1.34
2024-12-06 12:50:21,320 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=88 pTM=0.507 ipTM=0.201 tol=1.32
2024-12-06 12:50:42,061 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=88 pTM=0.525 ipTM=0.254 tol=1.05
2024-12-06 12:51:02,798 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=87.9 pTM=0.508 ipTM=0.21 tol=0.602
2024-12-06 12:51:23,560 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=88.1 pTM=0.534 ipTM=0.288 tol=0.837
2024-12-06 12:51:44,302 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=87.8 pTM=0.508 ipTM=0.213 tol=0.959
2024-12-06 12:52:05,047 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=87.9 pTM=0.517 ipTM=0.235 tol=0.817
2024-12-06 12:52:25,803 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=87.5 pTM=0.509 ipTM=0.226 tol=2.5
2024-12-06 12:52:46,555 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=88.1 pTM=0.513 ipTM=0.245 tol=2.95
2024-12-06 12:53:07,288 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=88 pTM=0.512 ipTM=0.244 tol=0.434
2024-12-06 12:53:07,289 alphafold2_multimer_v3_model_3_seed_000 took 249.0s (11 recycles)
2024-12-06 12:53:28,675 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=87.8 pTM=0.55 ipTM=0.308
2024-12-06 12:53:49,428 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=86.6 pTM=0.51 ipTM=0.205 tol=3.89
2024-12-06 12:54:10,198 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=87.1 pTM=0.501 ipTM=0.192 tol=1.99
2024-12-06 12:54:30,954 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=86.8 pTM=0.495 ipTM=0.184 tol=6.77
2024-12-06 12:54:51,744 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=86.8 pTM=0.497 ipTM=0.185 tol=3.82
2024-12-06 12:55:12,519 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=86.8 pTM=0.499 ipTM=0.191 tol=2.87
2024-12-06 12:55:33,311 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=86.9 pTM=0.5 ipTM=0.189 tol=3.2
2024-12-06 12:55:54,073 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=87 pTM=0.498 ipTM=0.189 tol=3.04
2024-12-06 12:56:14,867 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=87.1 pTM=0.5 ipTM=0.19 tol=3.85
2024-12-06 12:56:35,647 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=87.3 pTM=0.498 ipTM=0.187 tol=3.13
2024-12-06 12:56:56,424 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=86.8 pTM=0.5 ipTM=0.192 tol=3.08
2024-12-06 12:57:17,197 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=87.4 pTM=0.497 ipTM=0.188 tol=3.69
2024-12-06 12:57:37,984 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=87.1 pTM=0.502 ipTM=0.194 tol=6.48
2024-12-06 12:57:58,714 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=87.2 pTM=0.5 ipTM=0.194 tol=7.59
2024-12-06 12:58:19,501 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=87.4 pTM=0.497 ipTM=0.186 tol=1.14
2024-12-06 12:58:40,262 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=87.2 pTM=0.501 ipTM=0.195 tol=4.14
2024-12-06 12:59:01,050 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=87.2 pTM=0.498 ipTM=0.188 tol=6.4
2024-12-06 12:59:21,829 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=87.4 pTM=0.501 ipTM=0.195 tol=1.95
2024-12-06 12:59:42,572 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=86.9 pTM=0.499 ipTM=0.19 tol=2.92
2024-12-06 13:00:03,317 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=86.9 pTM=0.5 ipTM=0.193 tol=2.88
2024-12-06 13:00:24,088 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=87.1 pTM=0.499 ipTM=0.189 tol=2.51
2024-12-06 13:00:44,859 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=87 pTM=0.501 ipTM=0.192 tol=1.53
2024-12-06 13:01:05,635 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=86.8 pTM=0.499 ipTM=0.19 tol=1.64
2024-12-06 13:01:26,389 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=86.6 pTM=0.502 ipTM=0.195 tol=8.13
2024-12-06 13:01:47,163 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=86.7 pTM=0.5 ipTM=0.191 tol=4.18
2024-12-06 13:02:07,920 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=87.4 pTM=0.5 ipTM=0.195 tol=7.65
2024-12-06 13:02:28,672 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=87.1 pTM=0.498 ipTM=0.189 tol=1.26
2024-12-06 13:02:49,440 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=87.5 pTM=0.503 ipTM=0.198 tol=7.77
2024-12-06 13:03:10,193 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=86.7 pTM=0.5 ipTM=0.191 tol=2.17
2024-12-06 13:03:30,912 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=87.4 pTM=0.5 ipTM=0.192 tol=8.21
2024-12-06 13:03:51,664 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=87.2 pTM=0.499 ipTM=0.188 tol=6.09
2024-12-06 13:03:51,665 alphafold2_multimer_v3_model_4_seed_000 took 643.8s (30 recycles)
2024-12-06 13:04:13,010 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=88 pTM=0.617 ipTM=0.481
2024-12-06 13:04:33,768 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=88.1 pTM=0.589 ipTM=0.379 tol=1.86
2024-12-06 13:04:54,523 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=88.1 pTM=0.553 ipTM=0.31 tol=1.14
2024-12-06 13:05:15,279 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=87.9 pTM=0.543 ipTM=0.29 tol=0.584
2024-12-06 13:05:36,041 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=88.1 pTM=0.543 ipTM=0.293 tol=0.505
2024-12-06 13:05:56,788 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=87.8 pTM=0.536 ipTM=0.271 tol=0.826
2024-12-06 13:06:17,542 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=87.9 pTM=0.543 ipTM=0.29 tol=0.489
2024-12-06 13:06:17,543 alphafold2_multimer_v3_model_5_seed_000 took 145.3s (6 recycles)
2024-12-06 13:06:18,137 reranking models by 'multimer' metric
2024-12-06 13:06:21,488 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 13:07:58,978 Relaxation took 100.8s
2024-12-06 13:07:58,978 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=87.9 pTM=0.543 ipTM=0.29
2024-12-06 13:09:12,169 Relaxation took 73.2s
2024-12-06 13:09:12,169 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=88 pTM=0.512 ipTM=0.244
2024-12-06 13:10:11,723 Relaxation took 59.6s
2024-12-06 13:10:11,723 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=87.2 pTM=0.513 ipTM=0.211
2024-12-06 13:11:01,212 Relaxation took 49.5s
2024-12-06 13:11:01,212 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=87.8 pTM=0.505 ipTM=0.197
2024-12-06 13:12:23,147 Relaxation took 81.9s
2024-12-06 13:12:23,148 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=87.2 pTM=0.499 ipTM=0.188
2024-12-06 13:12:24,916 Done