2024-12-06 13:13:05,571 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 13:13:05,892 Running on GPU
2024-12-06 13:13:09,909 Found 6 citations for tools or databases
2024-12-06 13:13:09,909 Query 1/1: ITCH_C18orf1 (length 1209)
2024-12-06 13:13:10,266 Sleeping for 10s. Reason: PENDING
2024-12-06 13:13:20,532 Sleeping for 8s. Reason: RUNNING
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2024-12-06 13:14:49,389 Sleeping for 10s. Reason: RUNNING
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2024-12-06 13:15:18,165 Sleeping for 5s. Reason: RUNNING
2024-12-06 13:15:23,429 Sleeping for 5s. Reason: RUNNING
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2024-12-06 13:15:42,192 Sleeping for 6s. Reason: RUNNING
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2024-12-06 13:15:56,719 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:16:04,975 Sleeping for 10s. Reason: RUNNING
2024-12-06 13:16:15,234 Sleeping for 7s. Reason: RUNNING
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2024-12-06 13:16:27,743 Sleeping for 5s. Reason: RUNNING
2024-12-06 13:16:33,001 Sleeping for 9s. Reason: RUNNING
2024-12-06 13:16:44,590 Sleeping for 10s. Reason: PENDING
2024-12-06 13:16:54,856 Sleeping for 5s. Reason: RUNNING
2024-12-06 13:17:00,104 Sleeping for 7s. Reason: RUNNING
2024-12-06 13:17:07,362 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:17:15,619 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:17:23,880 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:17:32,135 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:17:40,391 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:17:48,649 Sleeping for 6s. Reason: RUNNING
2024-12-06 13:17:54,912 Sleeping for 9s. Reason: RUNNING
2024-12-06 13:18:04,170 Sleeping for 10s. Reason: RUNNING
2024-12-06 13:18:14,591 Sleeping for 9s. Reason: RUNNING
2024-12-06 13:18:23,847 Sleeping for 5s. Reason: RUNNING
2024-12-06 13:18:29,103 Sleeping for 7s. Reason: RUNNING
2024-12-06 13:18:36,374 Sleeping for 7s. Reason: RUNNING
2024-12-06 13:18:43,637 Sleeping for 7s. Reason: RUNNING
2024-12-06 13:18:50,897 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:18:59,159 Sleeping for 7s. Reason: RUNNING
2024-12-06 13:19:06,412 Sleeping for 10s. Reason: RUNNING
2024-12-06 13:19:22,944 Setting max_seq=508, max_extra_seq=2048
2024-12-06 13:22:46,401 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48.6 pTM=0.345 ipTM=0.177
2024-12-06 13:23:22,052 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.3 pTM=0.409 ipTM=0.217 tol=13.1
2024-12-06 13:23:57,795 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52.8 pTM=0.399 ipTM=0.216 tol=11.9
2024-12-06 13:24:33,637 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.7 pTM=0.401 ipTM=0.237 tol=8.7
2024-12-06 13:25:09,505 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.4 pTM=0.42 ipTM=0.326 tol=9.37
2024-12-06 13:25:45,383 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.4 pTM=0.412 ipTM=0.295 tol=5.83
2024-12-06 13:26:21,304 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53.6 pTM=0.403 ipTM=0.205 tol=6.82
2024-12-06 13:26:57,177 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.6 pTM=0.403 ipTM=0.189 tol=3.67
2024-12-06 13:27:33,070 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54 pTM=0.41 ipTM=0.193 tol=3.91
2024-12-06 13:28:08,984 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.9 pTM=0.407 ipTM=0.183 tol=2.5
2024-12-06 13:28:44,913 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.6 pTM=0.405 ipTM=0.198 tol=3.08
2024-12-06 13:29:20,834 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.8 pTM=0.405 ipTM=0.186 tol=2.5
2024-12-06 13:29:56,757 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54 pTM=0.409 ipTM=0.212 tol=1.77
2024-12-06 13:30:32,696 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.1 pTM=0.409 ipTM=0.197 tol=2.25
2024-12-06 13:31:08,606 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.4 pTM=0.408 ipTM=0.186 tol=1.44
2024-12-06 13:31:44,528 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54 pTM=0.407 ipTM=0.198 tol=2.47
2024-12-06 13:32:20,423 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.2 pTM=0.406 ipTM=0.198 tol=1.55
2024-12-06 13:32:56,312 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.2 pTM=0.409 ipTM=0.192 tol=2.49
2024-12-06 13:33:32,200 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.1 pTM=0.418 ipTM=0.213 tol=4.27
2024-12-06 13:34:08,075 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54 pTM=0.415 ipTM=0.186 tol=4.23
2024-12-06 13:34:43,965 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.2 pTM=0.416 ipTM=0.185 tol=4.84
2024-12-06 13:35:19,835 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.2 pTM=0.418 ipTM=0.185 tol=3.95
2024-12-06 13:35:55,701 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54 pTM=0.417 ipTM=0.187 tol=2.22
2024-12-06 13:36:31,570 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.3 pTM=0.419 ipTM=0.186 tol=4.19
2024-12-06 13:37:07,447 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.3 pTM=0.421 ipTM=0.19 tol=3.53
2024-12-06 13:37:43,320 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54 pTM=0.416 ipTM=0.188 tol=1.56
2024-12-06 13:38:19,202 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.2 pTM=0.418 ipTM=0.188 tol=1.16
2024-12-06 13:38:55,079 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.9 pTM=0.418 ipTM=0.185 tol=3.86
2024-12-06 13:39:30,982 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.5 pTM=0.42 ipTM=0.198 tol=3.81
2024-12-06 13:40:06,868 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54 pTM=0.417 ipTM=0.186 tol=1.89
2024-12-06 13:40:42,763 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.1 pTM=0.415 ipTM=0.187 tol=1.34
2024-12-06 13:40:42,764 alphafold2_multimer_v3_model_1_seed_000 took 1274.8s (30 recycles)
2024-12-06 13:41:19,581 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.8 pTM=0.332 ipTM=0.183
2024-12-06 13:41:55,606 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54.3 pTM=0.417 ipTM=0.255 tol=19.4
2024-12-06 13:42:31,654 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.5 pTM=0.425 ipTM=0.246 tol=12.6
2024-12-06 13:43:07,670 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.4 pTM=0.423 ipTM=0.332 tol=13.8
2024-12-06 13:43:43,690 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.9 pTM=0.419 ipTM=0.179 tol=11
2024-12-06 13:44:19,695 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=55.2 pTM=0.408 ipTM=0.175 tol=5.7
2024-12-06 13:44:55,763 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55.7 pTM=0.416 ipTM=0.168 tol=12.1
2024-12-06 13:45:31,823 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55.9 pTM=0.417 ipTM=0.17 tol=12
2024-12-06 13:46:07,884 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.8 pTM=0.42 ipTM=0.176 tol=6.63
2024-12-06 13:46:43,917 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.1 pTM=0.42 ipTM=0.174 tol=6.8
2024-12-06 13:47:19,950 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.8 pTM=0.421 ipTM=0.18 tol=4.11
2024-12-06 13:47:55,970 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55.9 pTM=0.421 ipTM=0.182 tol=3.42
2024-12-06 13:48:31,975 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.9 pTM=0.42 ipTM=0.179 tol=3.54
2024-12-06 13:49:07,937 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56 pTM=0.429 ipTM=0.271 tol=6.01
2024-12-06 13:49:43,908 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55.6 pTM=0.423 ipTM=0.228 tol=4.19
2024-12-06 13:50:19,897 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.2 pTM=0.416 ipTM=0.178 tol=5.78
2024-12-06 13:50:55,903 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.2 pTM=0.421 ipTM=0.231 tol=4.04
2024-12-06 13:51:31,897 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.3 pTM=0.421 ipTM=0.196 tol=3.97
2024-12-06 13:52:07,927 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.6 pTM=0.42 ipTM=0.178 tol=4.27
2024-12-06 13:52:43,953 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.6 pTM=0.421 ipTM=0.229 tol=4.91
2024-12-06 13:53:19,976 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.9 pTM=0.422 ipTM=0.19 tol=3.44
2024-12-06 13:53:55,968 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.5 pTM=0.415 ipTM=0.166 tol=3.03
2024-12-06 13:54:31,949 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.7 pTM=0.422 ipTM=0.227 tol=4.34
2024-12-06 13:55:07,950 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.6 pTM=0.421 ipTM=0.169 tol=3.8
2024-12-06 13:55:43,963 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.8 pTM=0.42 ipTM=0.164 tol=4.38
2024-12-06 13:56:19,957 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.9 pTM=0.419 ipTM=0.19 tol=6.4
2024-12-06 13:56:55,951 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.1 pTM=0.419 ipTM=0.171 tol=4.14
2024-12-06 13:57:31,920 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.8 pTM=0.421 ipTM=0.176 tol=3.41
2024-12-06 13:58:07,927 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.1 pTM=0.42 ipTM=0.173 tol=4.17
2024-12-06 13:58:43,901 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.1 pTM=0.418 ipTM=0.176 tol=3.43
2024-12-06 13:59:19,879 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56 pTM=0.419 ipTM=0.175 tol=3
2024-12-06 13:59:19,880 alphafold2_multimer_v3_model_2_seed_000 took 1116.2s (30 recycles)
2024-12-06 13:59:56,868 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49.2 pTM=0.364 ipTM=0.175
2024-12-06 14:00:32,952 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.3 pTM=0.406 ipTM=0.29 tol=17.2
2024-12-06 14:01:09,065 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.6 pTM=0.404 ipTM=0.321 tol=13.3
2024-12-06 14:01:45,188 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.6 pTM=0.398 ipTM=0.199 tol=11.5
2024-12-06 14:02:21,286 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.4 pTM=0.41 ipTM=0.332 tol=14.2
2024-12-06 14:02:57,373 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.6 pTM=0.398 ipTM=0.187 tol=12
2024-12-06 14:03:33,424 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.5 pTM=0.402 ipTM=0.247 tol=4.63
2024-12-06 14:04:09,470 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.7 pTM=0.402 ipTM=0.187 tol=8.27
2024-12-06 14:04:45,504 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.8 pTM=0.404 ipTM=0.246 tol=5.47
2024-12-06 14:05:21,546 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.6 pTM=0.402 ipTM=0.189 tol=8.2
2024-12-06 14:05:57,553 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.2 pTM=0.405 ipTM=0.268 tol=7.13
2024-12-06 14:06:33,578 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.8 pTM=0.403 ipTM=0.189 tol=7.46
2024-12-06 14:07:09,578 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.9 pTM=0.403 ipTM=0.227 tol=7.63
2024-12-06 14:07:45,587 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.8 pTM=0.403 ipTM=0.195 tol=5.56
2024-12-06 14:08:21,586 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.2 pTM=0.405 ipTM=0.249 tol=6.55
2024-12-06 14:08:57,592 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.7 pTM=0.406 ipTM=0.226 tol=6.01
2024-12-06 14:09:33,574 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.2 pTM=0.405 ipTM=0.271 tol=5.74
2024-12-06 14:10:09,547 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.9 pTM=0.402 ipTM=0.198 tol=6.28
2024-12-06 14:10:45,529 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.6 pTM=0.408 ipTM=0.265 tol=4.49
2024-12-06 14:11:21,495 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.8 pTM=0.402 ipTM=0.214 tol=4.11
2024-12-06 14:11:57,468 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.3 pTM=0.405 ipTM=0.245 tol=4.76
2024-12-06 14:12:33,422 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.7 pTM=0.402 ipTM=0.206 tol=2.63
2024-12-06 14:13:09,375 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.5 pTM=0.409 ipTM=0.257 tol=3.52
2024-12-06 14:13:45,339 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.7 pTM=0.402 ipTM=0.198 tol=2.52
2024-12-06 14:14:21,289 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54 pTM=0.403 ipTM=0.188 tol=2.74
2024-12-06 14:14:57,268 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.7 pTM=0.403 ipTM=0.197 tol=3.24
2024-12-06 14:15:33,240 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.2 pTM=0.407 ipTM=0.274 tol=2.67
2024-12-06 14:16:09,258 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.5 pTM=0.401 ipTM=0.198 tol=5.9
2024-12-06 14:16:45,312 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.5 pTM=0.408 ipTM=0.281 tol=5.29
2024-12-06 14:17:21,365 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.8 pTM=0.401 ipTM=0.195 tol=3.69
2024-12-06 14:17:57,418 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.8 pTM=0.402 ipTM=0.182 tol=4.37
2024-12-06 14:17:57,420 alphafold2_multimer_v3_model_3_seed_000 took 1116.6s (30 recycles)
2024-12-06 14:18:34,392 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48 pTM=0.342 ipTM=0.18
2024-12-06 14:19:10,463 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.1 pTM=0.401 ipTM=0.22 tol=19.9
2024-12-06 14:19:46,514 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.2 pTM=0.406 ipTM=0.251 tol=12
2024-12-06 14:20:22,566 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.7 pTM=0.399 ipTM=0.264 tol=7.52
2024-12-06 14:20:58,630 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.3 pTM=0.395 ipTM=0.268 tol=11.9
2024-12-06 14:21:34,691 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.3 pTM=0.396 ipTM=0.293 tol=9.71
2024-12-06 14:22:10,765 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.4 pTM=0.399 ipTM=0.197 tol=7.71
2024-12-06 14:22:46,784 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.2 pTM=0.399 ipTM=0.193 tol=8.7
2024-12-06 14:23:22,785 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.3 pTM=0.4 ipTM=0.232 tol=8.25
2024-12-06 14:23:58,786 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.3 pTM=0.401 ipTM=0.249 tol=5.87
2024-12-06 14:24:34,796 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.8 pTM=0.396 ipTM=0.194 tol=7.83
2024-12-06 14:25:10,776 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.5 pTM=0.405 ipTM=0.251 tol=9.89
2024-12-06 14:25:46,771 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52 pTM=0.395 ipTM=0.195 tol=11.3
2024-12-06 14:26:22,750 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52 pTM=0.4 ipTM=0.236 tol=4.59
2024-12-06 14:26:58,762 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52 pTM=0.396 ipTM=0.183 tol=5.28
2024-12-06 14:27:34,776 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.3 pTM=0.402 ipTM=0.217 tol=4.29
2024-12-06 14:28:10,808 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.5 pTM=0.411 ipTM=0.354 tol=4.3
2024-12-06 14:28:46,825 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.2 pTM=0.409 ipTM=0.301 tol=7.86
2024-12-06 14:29:22,859 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.6 pTM=0.401 ipTM=0.286 tol=9.57
2024-12-06 14:29:58,890 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.5 pTM=0.403 ipTM=0.246 tol=3.79
2024-12-06 14:30:34,924 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53 pTM=0.404 ipTM=0.308 tol=3.48
2024-12-06 14:31:10,992 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.6 pTM=0.403 ipTM=0.252 tol=3.79
2024-12-06 14:31:47,013 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.4 pTM=0.401 ipTM=0.22 tol=3.36
2024-12-06 14:32:23,028 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.4 pTM=0.399 ipTM=0.208 tol=4.84
2024-12-06 14:32:59,061 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.2 pTM=0.398 ipTM=0.198 tol=6.31
2024-12-06 14:33:35,095 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.3 pTM=0.396 ipTM=0.195 tol=4.89
2024-12-06 14:34:11,110 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.5 pTM=0.401 ipTM=0.226 tol=8.4
2024-12-06 14:34:47,157 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.4 pTM=0.396 ipTM=0.198 tol=7.64
2024-12-06 14:35:23,180 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.5 pTM=0.4 ipTM=0.207 tol=6.32
2024-12-06 14:35:59,178 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.8 pTM=0.406 ipTM=0.296 tol=8.21
2024-12-06 14:36:35,228 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.9 pTM=0.405 ipTM=0.253 tol=6.11
2024-12-06 14:36:35,229 alphafold2_multimer_v3_model_4_seed_000 took 1116.9s (30 recycles)
2024-12-06 14:37:12,264 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.6 pTM=0.345 ipTM=0.18
2024-12-06 14:37:48,403 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.8 pTM=0.398 ipTM=0.264 tol=14
2024-12-06 14:38:24,479 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.9 pTM=0.39 ipTM=0.204 tol=10.8
2024-12-06 14:39:00,560 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.2 pTM=0.395 ipTM=0.178 tol=5.81
2024-12-06 14:39:36,648 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.6 pTM=0.421 ipTM=0.416 tol=8.59
2024-12-06 14:40:12,689 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.7 pTM=0.415 ipTM=0.358 tol=8.23
2024-12-06 14:40:48,721 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.8 pTM=0.418 ipTM=0.324 tol=5.53
2024-12-06 14:41:24,720 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.2 pTM=0.422 ipTM=0.364 tol=6.48
2024-12-06 14:42:00,717 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.9 pTM=0.406 ipTM=0.229 tol=5.03
2024-12-06 14:42:36,715 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.8 pTM=0.404 ipTM=0.209 tol=4.91
2024-12-06 14:43:12,680 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.5 pTM=0.4 ipTM=0.199 tol=7.88
2024-12-06 14:43:48,692 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.8 pTM=0.399 ipTM=0.198 tol=5.7
2024-12-06 14:44:24,684 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54 pTM=0.406 ipTM=0.219 tol=3.55
2024-12-06 14:45:00,676 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.8 pTM=0.405 ipTM=0.18 tol=6.48
2024-12-06 14:45:36,676 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.5 pTM=0.413 ipTM=0.299 tol=5.89
2024-12-06 14:46:12,675 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.1 pTM=0.409 ipTM=0.197 tol=5.48
2024-12-06 14:46:48,683 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.2 pTM=0.427 ipTM=0.396 tol=7.18
2024-12-06 14:47:24,640 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.3 pTM=0.425 ipTM=0.279 tol=3.17
2024-12-06 14:48:00,646 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.1 pTM=0.41 ipTM=0.204 tol=6.65
2024-12-06 14:48:36,641 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.1 pTM=0.403 ipTM=0.176 tol=5.11
2024-12-06 14:49:12,623 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.8 pTM=0.421 ipTM=0.27 tol=5.52
2024-12-06 14:49:48,628 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.1 pTM=0.408 ipTM=0.178 tol=6.99
2024-12-06 14:50:24,676 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.1 pTM=0.406 ipTM=0.177 tol=2.52
2024-12-06 14:51:00,704 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.6 pTM=0.424 ipTM=0.352 tol=7.64
2024-12-06 14:51:36,747 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.2 pTM=0.416 ipTM=0.233 tol=6.14
2024-12-06 14:52:12,793 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54 pTM=0.405 ipTM=0.176 tol=7.16
2024-12-06 14:52:48,847 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.7 pTM=0.405 ipTM=0.18 tol=7.42
2024-12-06 14:53:24,892 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55 pTM=0.428 ipTM=0.413 tol=6.39
2024-12-06 14:54:00,891 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.2 pTM=0.418 ipTM=0.319 tol=4.07
2024-12-06 14:54:36,916 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.4 pTM=0.412 ipTM=0.274 tol=3.52
2024-12-06 14:55:12,905 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54 pTM=0.408 ipTM=0.245 tol=7.79
2024-12-06 14:55:12,906 alphafold2_multimer_v3_model_5_seed_000 took 1116.8s (30 recycles)
2024-12-06 14:55:13,806 reranking models by 'multimer' metric
2024-12-06 14:55:17,271 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 14:57:21,082 Relaxation took 127.3s
2024-12-06 14:57:21,082 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.9 pTM=0.405 ipTM=0.253
2024-12-06 14:59:29,412 Relaxation took 128.3s
2024-12-06 14:59:29,412 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54 pTM=0.408 ipTM=0.245
2024-12-06 15:01:57,361 Relaxation took 147.9s
2024-12-06 15:01:57,361 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.1 pTM=0.415 ipTM=0.187
2024-12-06 15:03:54,737 Relaxation took 117.4s
2024-12-06 15:03:54,737 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.8 pTM=0.402 ipTM=0.182
2024-12-06 15:05:37,853 Relaxation took 103.1s
2024-12-06 15:05:37,853 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56 pTM=0.419 ipTM=0.175
2024-12-06 15:05:40,135 Done