2024-12-06 13:27:45,960 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 13:27:46,272 Running on GPU
2024-12-06 13:27:49,817 Found 6 citations for tools or databases
2024-12-06 13:27:49,817 Query 1/1: KAT2B_DR1 (length 1008)
2024-12-06 13:27:50,131 Sleeping for 9s. Reason: PENDING
2024-12-06 13:27:59,391 Sleeping for 9s. Reason: RUNNING
2024-12-06 13:28:08,665 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:28:16,933 Sleeping for 5s. Reason: RUNNING
2024-12-06 13:28:22,194 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:28:30,454 Sleeping for 9s. Reason: RUNNING
2024-12-06 13:28:39,713 Sleeping for 10s. Reason: RUNNING
2024-12-06 13:28:49,977 Sleeping for 9s. Reason: RUNNING
2024-12-06 13:28:59,250 Sleeping for 6s. Reason: RUNNING
2024-12-06 13:29:05,507 Sleeping for 6s. Reason: RUNNING
2024-12-06 13:29:11,765 Sleeping for 10s. Reason: RUNNING
2024-12-06 13:29:22,027 Sleeping for 7s. Reason: RUNNING
2024-12-06 13:29:29,283 Sleeping for 5s. Reason: RUNNING
2024-12-06 13:29:34,708 Sleeping for 7s. Reason: RUNNING
2024-12-06 13:29:41,968 Sleeping for 9s. Reason: RUNNING
2024-12-06 13:29:51,231 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:30:01,264 Sleeping for 6s. Reason: PENDING
2024-12-06 13:30:07,523 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:30:15,785 Sleeping for 8s. Reason: RUNNING
2024-12-06 13:30:24,048 Sleeping for 6s. Reason: RUNNING
2024-12-06 13:30:30,303 Sleeping for 7s. Reason: RUNNING
2024-12-06 13:30:37,573 Sleeping for 10s. Reason: RUNNING
2024-12-06 13:30:47,838 Sleeping for 7s. Reason: RUNNING
2024-12-06 13:30:55,099 Sleeping for 6s. Reason: RUNNING
2024-12-06 13:31:01,361 Sleeping for 5s. Reason: RUNNING
2024-12-06 13:31:06,620 Sleeping for 10s. Reason: RUNNING
2024-12-06 13:31:20,455 Setting max_seq=508, max_extra_seq=2048
2024-12-06 13:33:32,533 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.1 pTM=0.365 ipTM=0.196
2024-12-06 13:33:52,379 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.8 pTM=0.363 ipTM=0.18 tol=7.29
2024-12-06 13:34:12,256 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.9 pTM=0.363 ipTM=0.179 tol=7.38
2024-12-06 13:34:32,188 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.9 pTM=0.364 ipTM=0.167 tol=3.6
2024-12-06 13:34:52,144 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.8 pTM=0.364 ipTM=0.171 tol=5.66
2024-12-06 13:35:12,103 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.8 pTM=0.364 ipTM=0.169 tol=4.9
2024-12-06 13:35:32,077 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.1 pTM=0.366 ipTM=0.169 tol=1.94
2024-12-06 13:35:52,063 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.1 pTM=0.366 ipTM=0.165 tol=1.39
2024-12-06 13:36:12,030 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.2 pTM=0.366 ipTM=0.166 tol=1.55
2024-12-06 13:36:31,981 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.5 pTM=0.365 ipTM=0.165 tol=2.43
2024-12-06 13:36:51,980 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.5 pTM=0.365 ipTM=0.169 tol=2.87
2024-12-06 13:37:11,954 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.5 pTM=0.366 ipTM=0.164 tol=1.69
2024-12-06 13:37:31,921 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.9 pTM=0.366 ipTM=0.167 tol=0.996
2024-12-06 13:37:51,897 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.2 pTM=0.365 ipTM=0.164 tol=2.22
2024-12-06 13:38:11,885 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.8 pTM=0.365 ipTM=0.166 tol=1.04
2024-12-06 13:38:31,874 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.8 pTM=0.364 ipTM=0.159 tol=3.78
2024-12-06 13:38:51,848 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65 pTM=0.365 ipTM=0.162 tol=4.09
2024-12-06 13:39:11,855 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.2 pTM=0.365 ipTM=0.155 tol=5.07
2024-12-06 13:39:31,848 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.9 pTM=0.366 ipTM=0.157 tol=3.84
2024-12-06 13:39:51,835 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.9 pTM=0.366 ipTM=0.159 tol=1.95
2024-12-06 13:40:11,829 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.9 pTM=0.366 ipTM=0.166 tol=4.23
2024-12-06 13:40:31,839 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.3 pTM=0.365 ipTM=0.168 tol=7.27
2024-12-06 13:40:51,838 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.1 pTM=0.365 ipTM=0.17 tol=3.07
2024-12-06 13:41:11,824 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.2 pTM=0.366 ipTM=0.168 tol=1.95
2024-12-06 13:41:31,816 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.4 pTM=0.364 ipTM=0.167 tol=1.77
2024-12-06 13:41:51,820 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.2 pTM=0.365 ipTM=0.164 tol=4.05
2024-12-06 13:42:11,797 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.2 pTM=0.364 ipTM=0.171 tol=3.38
2024-12-06 13:42:31,758 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.1 pTM=0.364 ipTM=0.162 tol=2.07
2024-12-06 13:42:51,740 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.9 pTM=0.364 ipTM=0.17 tol=1.78
2024-12-06 13:43:11,718 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65 pTM=0.363 ipTM=0.161 tol=3.87
2024-12-06 13:43:31,649 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.9 pTM=0.363 ipTM=0.169 tol=3.77
2024-12-06 13:43:31,650 alphafold2_multimer_v3_model_1_seed_000 took 726.0s (30 recycles)
2024-12-06 13:43:52,395 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.7 pTM=0.363 ipTM=0.197
2024-12-06 13:44:12,514 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.364 ipTM=0.192 tol=13.9
2024-12-06 13:44:32,601 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.6 pTM=0.367 ipTM=0.159 tol=7.46
2024-12-06 13:44:52,686 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.2 pTM=0.366 ipTM=0.157 tol=7.21
2024-12-06 13:45:12,742 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.9 pTM=0.366 ipTM=0.156 tol=5.15
2024-12-06 13:45:32,801 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.1 pTM=0.368 ipTM=0.156 tol=5
2024-12-06 13:45:52,859 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.6 pTM=0.368 ipTM=0.153 tol=3.61
2024-12-06 13:46:12,925 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.6 pTM=0.368 ipTM=0.15 tol=2.54
2024-12-06 13:46:32,987 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.8 pTM=0.367 ipTM=0.148 tol=1.97
2024-12-06 13:46:53,029 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67 pTM=0.368 ipTM=0.15 tol=1.37
2024-12-06 13:47:13,066 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67 pTM=0.368 ipTM=0.148 tol=1.17
2024-12-06 13:47:33,123 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.1 pTM=0.367 ipTM=0.146 tol=1.51
2024-12-06 13:47:53,195 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.8 pTM=0.366 ipTM=0.147 tol=1.35
2024-12-06 13:48:13,241 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.9 pTM=0.367 ipTM=0.146 tol=1.02
2024-12-06 13:48:33,296 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.6 pTM=0.367 ipTM=0.147 tol=1.09
2024-12-06 13:48:53,361 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.7 pTM=0.366 ipTM=0.148 tol=1.29
2024-12-06 13:49:13,414 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.8 pTM=0.366 ipTM=0.15 tol=1.15
2024-12-06 13:49:33,462 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.9 pTM=0.368 ipTM=0.152 tol=1.61
2024-12-06 13:49:53,536 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.8 pTM=0.368 ipTM=0.152 tol=1.19
2024-12-06 13:50:13,586 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.6 pTM=0.368 ipTM=0.152 tol=1.02
2024-12-06 13:50:33,610 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.7 pTM=0.368 ipTM=0.151 tol=1.41
2024-12-06 13:50:53,687 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.6 pTM=0.367 ipTM=0.151 tol=1.41
2024-12-06 13:51:13,747 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.6 pTM=0.366 ipTM=0.147 tol=1.12
2024-12-06 13:51:33,805 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.6 pTM=0.367 ipTM=0.148 tol=1.11
2024-12-06 13:51:53,871 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.7 pTM=0.366 ipTM=0.148 tol=1.29
2024-12-06 13:52:13,920 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.6 pTM=0.366 ipTM=0.148 tol=1.07
2024-12-06 13:52:33,985 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.6 pTM=0.366 ipTM=0.148 tol=1.27
2024-12-06 13:52:54,026 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.4 pTM=0.367 ipTM=0.15 tol=1.36
2024-12-06 13:53:14,086 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.8 pTM=0.367 ipTM=0.15 tol=1.21
2024-12-06 13:53:34,153 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.7 pTM=0.367 ipTM=0.148 tol=1.15
2024-12-06 13:53:54,193 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.9 pTM=0.367 ipTM=0.149 tol=1.48
2024-12-06 13:53:54,194 alphafold2_multimer_v3_model_2_seed_000 took 621.9s (30 recycles)
2024-12-06 13:54:14,973 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.1 pTM=0.356 ipTM=0.15
2024-12-06 13:54:35,078 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.9 pTM=0.354 ipTM=0.147 tol=12.2
2024-12-06 13:54:55,158 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.8 pTM=0.357 ipTM=0.148 tol=5.68
2024-12-06 13:55:15,225 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.5 pTM=0.358 ipTM=0.139 tol=5.38
2024-12-06 13:55:35,303 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.4 pTM=0.357 ipTM=0.145 tol=4
2024-12-06 13:55:55,387 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.6 pTM=0.359 ipTM=0.144 tol=3.28
2024-12-06 13:56:15,467 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.7 pTM=0.358 ipTM=0.138 tol=2.54
2024-12-06 13:56:35,533 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.4 pTM=0.357 ipTM=0.138 tol=3.02
2024-12-06 13:56:55,621 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.8 pTM=0.357 ipTM=0.138 tol=8.02
2024-12-06 13:57:15,683 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.9 pTM=0.357 ipTM=0.145 tol=2.8
2024-12-06 13:57:35,719 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.2 pTM=0.356 ipTM=0.161 tol=4.84
2024-12-06 13:57:55,781 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.4 pTM=0.356 ipTM=0.168 tol=2.7
2024-12-06 13:58:15,820 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.7 pTM=0.357 ipTM=0.174 tol=6.26
2024-12-06 13:58:35,881 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.4 pTM=0.355 ipTM=0.201 tol=7.55
2024-12-06 13:58:55,927 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.4 pTM=0.355 ipTM=0.191 tol=2.82
2024-12-06 13:59:15,974 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.6 pTM=0.354 ipTM=0.204 tol=3.24
2024-12-06 13:59:36,039 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.6 pTM=0.354 ipTM=0.208 tol=1.58
2024-12-06 13:59:56,098 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.8 pTM=0.354 ipTM=0.203 tol=2.79
2024-12-06 14:00:16,147 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.8 pTM=0.354 ipTM=0.214 tol=3.39
2024-12-06 14:00:36,180 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.6 pTM=0.354 ipTM=0.219 tol=2.66
2024-12-06 14:00:56,224 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.9 pTM=0.354 ipTM=0.222 tol=1.76
2024-12-06 14:01:16,240 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.9 pTM=0.354 ipTM=0.215 tol=2.57
2024-12-06 14:01:36,299 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.7 pTM=0.353 ipTM=0.207 tol=0.856
2024-12-06 14:01:56,352 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.6 pTM=0.353 ipTM=0.21 tol=1.1
2024-12-06 14:02:16,398 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.5 pTM=0.353 ipTM=0.206 tol=11.4
2024-12-06 14:02:36,491 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.6 pTM=0.352 ipTM=0.18 tol=10.2
2024-12-06 14:02:56,591 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.4 pTM=0.353 ipTM=0.176 tol=5.72
2024-12-06 14:03:16,670 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.3 pTM=0.353 ipTM=0.194 tol=4.62
2024-12-06 14:03:36,715 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.2 pTM=0.353 ipTM=0.173 tol=5.49
2024-12-06 14:03:56,782 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.2 pTM=0.354 ipTM=0.164 tol=3.63
2024-12-06 14:04:16,826 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.3 pTM=0.353 ipTM=0.192 tol=3.32
2024-12-06 14:04:16,827 alphafold2_multimer_v3_model_3_seed_000 took 622.0s (30 recycles)
2024-12-06 14:04:37,550 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.7 pTM=0.35 ipTM=0.191
2024-12-06 14:04:57,642 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65 pTM=0.351 ipTM=0.151 tol=11.2
2024-12-06 14:05:17,684 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.4 pTM=0.351 ipTM=0.15 tol=4.11
2024-12-06 14:05:37,706 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.2 pTM=0.353 ipTM=0.146 tol=6.29
2024-12-06 14:05:57,688 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.2 pTM=0.351 ipTM=0.153 tol=4.46
2024-12-06 14:06:17,697 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65 pTM=0.352 ipTM=0.154 tol=3.64
2024-12-06 14:06:37,686 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.2 pTM=0.351 ipTM=0.151 tol=3.35
2024-12-06 14:06:57,704 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.8 pTM=0.351 ipTM=0.156 tol=2.63
2024-12-06 14:07:17,749 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.3 pTM=0.352 ipTM=0.153 tol=4.37
2024-12-06 14:07:37,725 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.6 pTM=0.352 ipTM=0.155 tol=3.97
2024-12-06 14:07:57,698 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.4 pTM=0.351 ipTM=0.149 tol=4.35
2024-12-06 14:08:17,699 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.3 pTM=0.35 ipTM=0.146 tol=4.14
2024-12-06 14:08:37,716 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.1 pTM=0.35 ipTM=0.148 tol=4.71
2024-12-06 14:08:57,742 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.4 pTM=0.351 ipTM=0.148 tol=3.12
2024-12-06 14:09:17,743 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65 pTM=0.35 ipTM=0.148 tol=2.15
2024-12-06 14:09:37,756 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.9 pTM=0.349 ipTM=0.149 tol=2.04
2024-12-06 14:09:57,769 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.9 pTM=0.35 ipTM=0.15 tol=2.25
2024-12-06 14:10:17,749 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.1 pTM=0.351 ipTM=0.15 tol=2.74
2024-12-06 14:10:37,741 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.2 pTM=0.352 ipTM=0.153 tol=1.37
2024-12-06 14:10:57,713 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.7 pTM=0.35 ipTM=0.152 tol=1.41
2024-12-06 14:11:17,754 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.2 pTM=0.35 ipTM=0.15 tol=2.79
2024-12-06 14:11:37,769 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65 pTM=0.35 ipTM=0.148 tol=1.71
2024-12-06 14:11:57,806 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.1 pTM=0.349 ipTM=0.147 tol=2.25
2024-12-06 14:12:17,849 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.8 pTM=0.349 ipTM=0.146 tol=2.79
2024-12-06 14:12:37,898 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.8 pTM=0.348 ipTM=0.15 tol=3.02
2024-12-06 14:12:57,906 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.9 pTM=0.348 ipTM=0.147 tol=1.59
2024-12-06 14:13:17,908 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.2 pTM=0.351 ipTM=0.15 tol=2.75
2024-12-06 14:13:37,908 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.8 pTM=0.348 ipTM=0.146 tol=2.15
2024-12-06 14:13:57,917 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.9 pTM=0.349 ipTM=0.144 tol=2
2024-12-06 14:14:17,918 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65 pTM=0.349 ipTM=0.148 tol=1.44
2024-12-06 14:14:37,920 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.1 pTM=0.349 ipTM=0.15 tol=2.57
2024-12-06 14:14:37,921 alphafold2_multimer_v3_model_4_seed_000 took 620.5s (30 recycles)
2024-12-06 14:14:58,606 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.9 pTM=0.369 ipTM=0.192
2024-12-06 14:15:18,628 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.8 pTM=0.369 ipTM=0.186 tol=11.1
2024-12-06 14:15:38,668 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.6 pTM=0.366 ipTM=0.165 tol=7.24
2024-12-06 14:15:58,694 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.8 pTM=0.366 ipTM=0.155 tol=5.71
2024-12-06 14:16:18,702 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.7 pTM=0.364 ipTM=0.143 tol=5.2
2024-12-06 14:16:38,716 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.5 pTM=0.363 ipTM=0.139 tol=3.51
2024-12-06 14:16:58,721 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.5 pTM=0.364 ipTM=0.141 tol=1.49
2024-12-06 14:17:18,719 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.6 pTM=0.364 ipTM=0.138 tol=1.54
2024-12-06 14:17:38,724 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.8 pTM=0.363 ipTM=0.136 tol=4.11
2024-12-06 14:17:58,715 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67 pTM=0.362 ipTM=0.138 tol=4.3
2024-12-06 14:18:18,711 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.1 pTM=0.362 ipTM=0.137 tol=2.52
2024-12-06 14:18:38,692 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.9 pTM=0.362 ipTM=0.132 tol=5.05
2024-12-06 14:18:58,696 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.8 pTM=0.362 ipTM=0.134 tol=4.57
2024-12-06 14:19:18,681 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.1 pTM=0.362 ipTM=0.135 tol=3.81
2024-12-06 14:19:38,700 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.9 pTM=0.361 ipTM=0.135 tol=5.43
2024-12-06 14:19:58,701 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.9 pTM=0.36 ipTM=0.136 tol=3.73
2024-12-06 14:20:18,681 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.9 pTM=0.361 ipTM=0.135 tol=6.07
2024-12-06 14:20:38,660 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67 pTM=0.361 ipTM=0.132 tol=3.07
2024-12-06 14:20:58,634 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.9 pTM=0.361 ipTM=0.133 tol=2.89
2024-12-06 14:21:18,620 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.8 pTM=0.362 ipTM=0.135 tol=2.72
2024-12-06 14:21:38,596 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.2 pTM=0.362 ipTM=0.136 tol=2.7
2024-12-06 14:21:58,570 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67 pTM=0.361 ipTM=0.136 tol=2.06
2024-12-06 14:22:18,552 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67 pTM=0.361 ipTM=0.134 tol=2.4
2024-12-06 14:22:38,539 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.8 pTM=0.36 ipTM=0.133 tol=2.1
2024-12-06 14:22:58,522 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67 pTM=0.36 ipTM=0.133 tol=2.38
2024-12-06 14:23:18,540 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67 pTM=0.359 ipTM=0.134 tol=3.07
2024-12-06 14:23:38,562 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67 pTM=0.361 ipTM=0.134 tol=1.95
2024-12-06 14:23:58,550 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.8 pTM=0.361 ipTM=0.134 tol=1.79
2024-12-06 14:24:18,542 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.8 pTM=0.36 ipTM=0.135 tol=2.15
2024-12-06 14:24:38,525 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.9 pTM=0.36 ipTM=0.135 tol=2
2024-12-06 14:24:58,500 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.1 pTM=0.361 ipTM=0.136 tol=2.72
2024-12-06 14:24:58,500 alphafold2_multimer_v3_model_5_seed_000 took 619.9s (30 recycles)
2024-12-06 14:24:59,129 reranking models by 'multimer' metric
2024-12-06 14:25:00,364 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 14:26:27,746 Relaxation took 88.6s
2024-12-06 14:26:27,746 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.3 pTM=0.353 ipTM=0.192
2024-12-06 14:27:39,312 Relaxation took 71.6s
2024-12-06 14:27:39,312 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.9 pTM=0.363 ipTM=0.169
2024-12-06 14:28:43,931 Relaxation took 64.6s
2024-12-06 14:28:43,932 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.9 pTM=0.367 ipTM=0.149
2024-12-06 14:39:40,652 Relaxation took 656.7s
2024-12-06 14:39:40,652 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.1 pTM=0.349 ipTM=0.15
2024-12-06 14:41:05,417 Relaxation took 84.8s
2024-12-06 14:41:05,418 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.1 pTM=0.361 ipTM=0.136
2024-12-06 14:41:07,378 Done