2024-12-06 14:41:34,767 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 14:41:35,216 Running on GPU
2024-12-06 14:41:39,273 Found 6 citations for tools or databases
2024-12-06 14:41:39,273 Query 1/1: KATNB1_PFDN2 (length 809)
2024-12-06 14:41:39,570 Sleeping for 9s. Reason: PENDING
2024-12-06 14:41:48,832 Sleeping for 9s. Reason: RUNNING
2024-12-06 14:41:58,093 Sleeping for 10s. Reason: RUNNING
2024-12-06 14:42:08,360 Sleeping for 5s. Reason: RUNNING
2024-12-06 14:42:13,620 Sleeping for 9s. Reason: RUNNING
2024-12-06 14:42:22,883 Sleeping for 7s. Reason: RUNNING
2024-12-06 14:42:30,148 Sleeping for 10s. Reason: RUNNING
2024-12-06 14:42:40,409 Sleeping for 7s. Reason: RUNNING
2024-12-06 14:42:47,817 Sleeping for 8s. Reason: RUNNING
2024-12-06 14:42:56,081 Sleeping for 5s. Reason: RUNNING
2024-12-06 14:43:01,349 Sleeping for 7s. Reason: RUNNING
2024-12-06 14:43:08,609 Sleeping for 6s. Reason: RUNNING
2024-12-06 14:43:14,864 Sleeping for 10s. Reason: RUNNING
2024-12-06 14:43:25,124 Sleeping for 10s. Reason: RUNNING
2024-12-06 14:43:35,387 Sleeping for 5s. Reason: RUNNING
2024-12-06 14:43:42,162 Sleeping for 7s. Reason: PENDING
2024-12-06 14:43:49,795 Sleeping for 6s. Reason: RUNNING
2024-12-06 14:43:56,059 Sleeping for 8s. Reason: RUNNING
2024-12-06 14:44:04,323 Sleeping for 5s. Reason: RUNNING
2024-12-06 14:44:09,575 Sleeping for 6s. Reason: RUNNING
2024-12-06 14:44:15,835 Sleeping for 8s. Reason: RUNNING
2024-12-06 14:44:24,100 Sleeping for 10s. Reason: RUNNING
2024-12-06 14:44:34,356 Sleeping for 6s. Reason: RUNNING
2024-12-06 14:44:40,611 Sleeping for 8s. Reason: RUNNING
2024-12-06 14:44:48,868 Sleeping for 7s. Reason: RUNNING
2024-12-06 14:44:56,125 Sleeping for 5s. Reason: RUNNING
2024-12-06 14:45:01,378 Sleeping for 10s. Reason: RUNNING
2024-12-06 14:45:11,647 Sleeping for 10s. Reason: RUNNING
2024-12-06 14:45:25,211 Setting max_seq=508, max_extra_seq=2048
2024-12-06 14:48:23,177 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.4 pTM=0.49 ipTM=0.146
2024-12-06 14:48:36,542 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.5 pTM=0.497 ipTM=0.147 tol=6.69
2024-12-06 14:48:49,951 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.9 pTM=0.496 ipTM=0.161 tol=3.32
2024-12-06 14:49:03,386 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.1 pTM=0.493 ipTM=0.149 tol=2.78
2024-12-06 14:49:16,833 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.2 pTM=0.492 ipTM=0.154 tol=1.41
2024-12-06 14:49:30,332 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.4 pTM=0.492 ipTM=0.155 tol=1.16
2024-12-06 14:49:43,837 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.1 pTM=0.49 ipTM=0.158 tol=1.21
2024-12-06 14:49:57,345 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.1 pTM=0.491 ipTM=0.168 tol=1.27
2024-12-06 14:50:10,884 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.4 pTM=0.491 ipTM=0.167 tol=0.908
2024-12-06 14:50:24,419 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.2 pTM=0.492 ipTM=0.177 tol=0.918
2024-12-06 14:50:37,971 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.1 pTM=0.49 ipTM=0.158 tol=1.43
2024-12-06 14:50:51,536 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.2 pTM=0.491 ipTM=0.165 tol=1.05
2024-12-06 14:51:05,117 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.4 pTM=0.49 ipTM=0.156 tol=1.26
2024-12-06 14:51:18,684 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.1 pTM=0.489 ipTM=0.169 tol=1.11
2024-12-06 14:51:32,261 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70.2 pTM=0.489 ipTM=0.155 tol=1.12
2024-12-06 14:51:45,844 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.3 pTM=0.489 ipTM=0.166 tol=1.42
2024-12-06 14:51:59,436 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.1 pTM=0.488 ipTM=0.157 tol=1.37
2024-12-06 14:52:13,018 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70 pTM=0.489 ipTM=0.168 tol=1.67
2024-12-06 14:52:26,616 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=70.1 pTM=0.488 ipTM=0.156 tol=1.33
2024-12-06 14:52:40,210 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.1 pTM=0.49 ipTM=0.167 tol=1.21
2024-12-06 14:52:53,796 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.9 pTM=0.488 ipTM=0.161 tol=1.01
2024-12-06 14:53:07,383 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.1 pTM=0.492 ipTM=0.18 tol=2.02
2024-12-06 14:53:20,998 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.1 pTM=0.49 ipTM=0.162 tol=2.02
2024-12-06 14:53:34,594 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.1 pTM=0.491 ipTM=0.178 tol=1.76
2024-12-06 14:53:48,193 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.1 pTM=0.489 ipTM=0.16 tol=1.3
2024-12-06 14:54:01,792 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.9 pTM=0.489 ipTM=0.165 tol=0.839
2024-12-06 14:54:15,413 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.1 pTM=0.489 ipTM=0.159 tol=1.29
2024-12-06 14:54:29,013 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.9 pTM=0.49 ipTM=0.175 tol=1.61
2024-12-06 14:54:42,627 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70 pTM=0.491 ipTM=0.165 tol=1.07
2024-12-06 14:54:56,223 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.8 pTM=0.488 ipTM=0.167 tol=0.71
2024-12-06 14:55:09,826 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.7 pTM=0.491 ipTM=0.17 tol=0.788
2024-12-06 14:55:09,826 alphafold2_multimer_v3_model_1_seed_000 took 581.0s (30 recycles)
2024-12-06 14:55:23,906 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.6 pTM=0.489 ipTM=0.134
2024-12-06 14:55:37,552 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.8 pTM=0.497 ipTM=0.141 tol=6.16
2024-12-06 14:55:51,204 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.2 pTM=0.497 ipTM=0.136 tol=4.43
2024-12-06 14:56:04,837 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.2 pTM=0.495 ipTM=0.137 tol=3.4
2024-12-06 14:56:18,461 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.4 pTM=0.498 ipTM=0.145 tol=3.78
2024-12-06 14:56:32,084 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.4 pTM=0.497 ipTM=0.145 tol=2.36
2024-12-06 14:56:45,714 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.2 pTM=0.496 ipTM=0.146 tol=1.73
2024-12-06 14:56:59,343 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.2 pTM=0.494 ipTM=0.142 tol=1.1
2024-12-06 14:57:12,982 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.4 pTM=0.495 ipTM=0.146 tol=1.41
2024-12-06 14:57:26,605 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.4 pTM=0.494 ipTM=0.146 tol=1.47
2024-12-06 14:57:40,230 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.2 pTM=0.495 ipTM=0.145 tol=1.17
2024-12-06 14:57:53,874 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.5 pTM=0.496 ipTM=0.148 tol=1.83
2024-12-06 14:58:07,499 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.4 pTM=0.495 ipTM=0.148 tol=1.83
2024-12-06 14:58:21,136 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.1 pTM=0.494 ipTM=0.145 tol=1.12
2024-12-06 14:58:34,775 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.2 pTM=0.496 ipTM=0.147 tol=0.966
2024-12-06 14:58:48,409 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.6 pTM=0.496 ipTM=0.147 tol=1.46
2024-12-06 14:59:02,033 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.3 pTM=0.496 ipTM=0.149 tol=0.959
2024-12-06 14:59:15,647 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.4 pTM=0.496 ipTM=0.146 tol=1.44
2024-12-06 14:59:29,277 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.4 pTM=0.495 ipTM=0.144 tol=1.46
2024-12-06 14:59:42,890 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.7 pTM=0.496 ipTM=0.145 tol=0.758
2024-12-06 14:59:56,515 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.4 pTM=0.495 ipTM=0.148 tol=1.04
2024-12-06 15:00:10,138 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.7 pTM=0.496 ipTM=0.149 tol=0.809
2024-12-06 15:00:23,773 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.9 pTM=0.497 ipTM=0.149 tol=0.92
2024-12-06 15:00:37,405 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.2 pTM=0.497 ipTM=0.155 tol=1.02
2024-12-06 15:00:51,036 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.8 pTM=0.497 ipTM=0.152 tol=1.08
2024-12-06 15:01:04,668 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.4 pTM=0.494 ipTM=0.151 tol=1.29
2024-12-06 15:01:18,327 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.3 pTM=0.495 ipTM=0.151 tol=3.6
2024-12-06 15:01:31,974 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.5 pTM=0.495 ipTM=0.151 tol=1.66
2024-12-06 15:01:45,632 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.2 pTM=0.498 ipTM=0.151 tol=4.01
2024-12-06 15:01:59,273 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.6 pTM=0.497 ipTM=0.148 tol=2.97
2024-12-06 15:02:12,912 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.3 pTM=0.498 ipTM=0.148 tol=2.59
2024-12-06 15:02:12,913 alphafold2_multimer_v3_model_2_seed_000 took 422.7s (30 recycles)
2024-12-06 15:02:27,017 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.7 pTM=0.49 ipTM=0.135
2024-12-06 15:02:40,665 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.7 pTM=0.497 ipTM=0.152 tol=5.81
2024-12-06 15:02:54,286 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.7 pTM=0.493 ipTM=0.147 tol=5.48
2024-12-06 15:03:07,881 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.6 pTM=0.492 ipTM=0.152 tol=4.33
2024-12-06 15:03:21,505 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.8 pTM=0.495 ipTM=0.158 tol=4.23
2024-12-06 15:03:35,126 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.4 pTM=0.491 ipTM=0.147 tol=2.94
2024-12-06 15:03:48,770 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.7 pTM=0.491 ipTM=0.144 tol=3.82
2024-12-06 15:04:02,391 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.6 pTM=0.486 ipTM=0.215 tol=11
2024-12-06 15:04:16,016 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.7 pTM=0.485 ipTM=0.136 tol=4.81
2024-12-06 15:04:29,638 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.2 pTM=0.489 ipTM=0.152 tol=9.26
2024-12-06 15:04:43,254 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70 pTM=0.49 ipTM=0.151 tol=2.31
2024-12-06 15:04:56,885 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.1 pTM=0.492 ipTM=0.154 tol=1.83
2024-12-06 15:05:10,513 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.1 pTM=0.489 ipTM=0.146 tol=4.35
2024-12-06 15:05:24,145 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.4 pTM=0.488 ipTM=0.144 tol=2.5
2024-12-06 15:05:37,776 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.8 pTM=0.492 ipTM=0.158 tol=3.07
2024-12-06 15:05:51,390 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.5 pTM=0.486 ipTM=0.325 tol=11.4
2024-12-06 15:06:05,029 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.8 pTM=0.485 ipTM=0.14 tol=5.55
2024-12-06 15:06:18,666 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.7 pTM=0.49 ipTM=0.158 tol=7.73
2024-12-06 15:06:32,315 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.4 pTM=0.489 ipTM=0.148 tol=1.7
2024-12-06 15:06:45,965 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.8 pTM=0.485 ipTM=0.255 tol=11.1
2024-12-06 15:06:59,623 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.6 pTM=0.489 ipTM=0.151 tol=9.83
2024-12-06 15:07:13,272 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.3 pTM=0.489 ipTM=0.143 tol=3.92
2024-12-06 15:07:26,916 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.8 pTM=0.489 ipTM=0.202 tol=10.6
2024-12-06 15:07:40,570 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.1 pTM=0.488 ipTM=0.144 tol=9.16
2024-12-06 15:07:54,220 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.9 pTM=0.491 ipTM=0.157 tol=5.13
2024-12-06 15:08:07,865 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.9 pTM=0.488 ipTM=0.174 tol=6.49
2024-12-06 15:08:21,532 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.6 pTM=0.489 ipTM=0.155 tol=5.09
2024-12-06 15:08:35,193 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.4 pTM=0.489 ipTM=0.137 tol=2.28
2024-12-06 15:08:48,852 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.4 pTM=0.491 ipTM=0.153 tol=2.7
2024-12-06 15:09:02,509 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.1 pTM=0.49 ipTM=0.147 tol=2.33
2024-12-06 15:09:16,171 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.9 pTM=0.492 ipTM=0.149 tol=2.66
2024-12-06 15:09:16,172 alphafold2_multimer_v3_model_3_seed_000 took 422.8s (30 recycles)
2024-12-06 15:09:30,251 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.6 pTM=0.489 ipTM=0.13
2024-12-06 15:09:43,883 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.6 pTM=0.486 ipTM=0.145 tol=8.48
2024-12-06 15:09:57,512 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.4 pTM=0.485 ipTM=0.146 tol=3.42
2024-12-06 15:10:11,141 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69 pTM=0.485 ipTM=0.145 tol=1.8
2024-12-06 15:10:24,762 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.9 pTM=0.485 ipTM=0.146 tol=1.96
2024-12-06 15:10:38,388 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.8 pTM=0.483 ipTM=0.146 tol=1.62
2024-12-06 15:10:52,024 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.7 pTM=0.485 ipTM=0.149 tol=2
2024-12-06 15:11:05,642 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.8 pTM=0.482 ipTM=0.152 tol=1.87
2024-12-06 15:11:19,274 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.9 pTM=0.481 ipTM=0.151 tol=1.64
2024-12-06 15:11:32,887 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.6 pTM=0.479 ipTM=0.144 tol=1.7
2024-12-06 15:11:46,494 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.6 pTM=0.483 ipTM=0.157 tol=1.62
2024-12-06 15:12:00,123 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.8 pTM=0.483 ipTM=0.147 tol=1.84
2024-12-06 15:12:13,741 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.9 pTM=0.484 ipTM=0.157 tol=1.31
2024-12-06 15:12:27,355 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.4 pTM=0.48 ipTM=0.148 tol=1.59
2024-12-06 15:12:40,965 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.9 pTM=0.483 ipTM=0.154 tol=1.83
2024-12-06 15:12:54,587 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.9 pTM=0.48 ipTM=0.141 tol=1.9
2024-12-06 15:13:08,208 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69 pTM=0.483 ipTM=0.157 tol=1.68
2024-12-06 15:13:21,820 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.6 pTM=0.479 ipTM=0.141 tol=1.31
2024-12-06 15:13:35,438 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.8 pTM=0.484 ipTM=0.159 tol=1.52
2024-12-06 15:13:49,079 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.3 pTM=0.482 ipTM=0.141 tol=1.96
2024-12-06 15:14:02,693 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.7 pTM=0.482 ipTM=0.155 tol=2.05
2024-12-06 15:14:16,325 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.7 pTM=0.479 ipTM=0.145 tol=2.26
2024-12-06 15:14:29,956 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.8 pTM=0.485 ipTM=0.159 tol=2.06
2024-12-06 15:14:43,592 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.9 pTM=0.48 ipTM=0.143 tol=1.55
2024-12-06 15:14:57,205 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.6 pTM=0.482 ipTM=0.16 tol=1.3
2024-12-06 15:15:10,816 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.1 pTM=0.48 ipTM=0.149 tol=1.88
2024-12-06 15:15:24,440 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.6 pTM=0.484 ipTM=0.162 tol=1.83
2024-12-06 15:15:38,072 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.6 pTM=0.479 ipTM=0.142 tol=1.45
2024-12-06 15:15:51,712 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.8 pTM=0.483 ipTM=0.162 tol=1.5
2024-12-06 15:16:05,336 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.5 pTM=0.479 ipTM=0.142 tol=1.33
2024-12-06 15:16:18,913 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.4 pTM=0.484 ipTM=0.167 tol=1.65
2024-12-06 15:16:18,914 alphafold2_multimer_v3_model_4_seed_000 took 422.3s (30 recycles)
2024-12-06 15:16:32,965 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.6 pTM=0.49 ipTM=0.134
2024-12-06 15:16:46,589 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71.4 pTM=0.499 ipTM=0.145 tol=4.5
2024-12-06 15:17:00,220 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.7 pTM=0.498 ipTM=0.14 tol=2.45
2024-12-06 15:17:13,843 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.7 pTM=0.499 ipTM=0.142 tol=1.77
2024-12-06 15:17:27,463 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.8 pTM=0.499 ipTM=0.143 tol=1.27
2024-12-06 15:17:41,083 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=71.6 pTM=0.498 ipTM=0.145 tol=1.06
2024-12-06 15:17:54,689 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.4 pTM=0.498 ipTM=0.143 tol=0.607
2024-12-06 15:18:08,321 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.6 pTM=0.497 ipTM=0.141 tol=0.546
2024-12-06 15:18:21,939 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.6 pTM=0.495 ipTM=0.141 tol=0.558
2024-12-06 15:18:35,559 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.4 pTM=0.496 ipTM=0.141 tol=0.595
2024-12-06 15:18:49,190 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.2 pTM=0.497 ipTM=0.141 tol=0.667
2024-12-06 15:19:02,846 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.6 pTM=0.497 ipTM=0.142 tol=1.04
2024-12-06 15:19:16,472 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.4 pTM=0.496 ipTM=0.141 tol=1.29
2024-12-06 15:19:30,093 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.4 pTM=0.495 ipTM=0.142 tol=1.01
2024-12-06 15:19:43,719 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.4 pTM=0.496 ipTM=0.14 tol=0.811
2024-12-06 15:19:57,372 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.5 pTM=0.495 ipTM=0.143 tol=0.966
2024-12-06 15:20:11,026 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.5 pTM=0.496 ipTM=0.142 tol=0.849
2024-12-06 15:20:24,692 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.4 pTM=0.496 ipTM=0.145 tol=1.31
2024-12-06 15:20:38,339 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.4 pTM=0.495 ipTM=0.145 tol=0.716
2024-12-06 15:20:51,975 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.6 pTM=0.495 ipTM=0.144 tol=0.893
2024-12-06 15:21:05,612 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.4 pTM=0.498 ipTM=0.147 tol=1.07
2024-12-06 15:21:19,262 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.5 pTM=0.497 ipTM=0.144 tol=0.859
2024-12-06 15:21:32,899 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.4 pTM=0.498 ipTM=0.146 tol=1.15
2024-12-06 15:21:46,534 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.4 pTM=0.495 ipTM=0.145 tol=1.1
2024-12-06 15:22:00,182 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.2 pTM=0.496 ipTM=0.15 tol=1.05
2024-12-06 15:22:13,806 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.5 pTM=0.494 ipTM=0.145 tol=0.909
2024-12-06 15:22:27,442 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.4 pTM=0.496 ipTM=0.15 tol=0.867
2024-12-06 15:22:41,103 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.4 pTM=0.495 ipTM=0.144 tol=0.739
2024-12-06 15:22:54,754 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.5 pTM=0.499 ipTM=0.149 tol=1.34
2024-12-06 15:23:08,389 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.4 pTM=0.496 ipTM=0.144 tol=0.888
2024-12-06 15:23:22,030 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.4 pTM=0.497 ipTM=0.146 tol=0.979
2024-12-06 15:23:22,031 alphafold2_multimer_v3_model_5_seed_000 took 422.7s (30 recycles)
2024-12-06 15:23:22,448 reranking models by 'multimer' metric
2024-12-06 15:23:26,045 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 15:23:56,265 Relaxation took 33.8s
2024-12-06 15:23:56,265 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.7 pTM=0.491 ipTM=0.17
2024-12-06 15:24:59,329 Relaxation took 63.1s
2024-12-06 15:24:59,329 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.4 pTM=0.484 ipTM=0.167
2024-12-06 15:25:17,979 Relaxation took 18.6s
2024-12-06 15:25:17,980 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.3 pTM=0.498 ipTM=0.148
2024-12-06 15:26:09,097 Relaxation took 51.1s
2024-12-06 15:26:09,097 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.9 pTM=0.492 ipTM=0.149
2024-12-06 15:26:31,401 Relaxation took 22.3s
2024-12-06 15:26:31,401 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.4 pTM=0.497 ipTM=0.146
2024-12-06 15:26:33,003 Done