2024-12-06 15:06:15,322 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 15:06:15,632 Running on GPU
2024-12-06 15:06:19,229 Found 6 citations for tools or databases
2024-12-06 15:06:19,229 Query 1/1: KBTBD6_DOK4 (length 1000)
2024-12-06 15:06:19,507 Sleeping for 7s. Reason: PENDING
2024-12-06 15:06:26,765 Sleeping for 6s. Reason: RUNNING
2024-12-06 15:06:33,025 Sleeping for 5s. Reason: RUNNING
2024-12-06 15:06:38,280 Sleeping for 10s. Reason: RUNNING
2024-12-06 15:06:48,700 Sleeping for 9s. Reason: RUNNING
2024-12-06 15:06:57,962 Sleeping for 7s. Reason: RUNNING
2024-12-06 15:07:05,222 Sleeping for 7s. Reason: RUNNING
2024-12-06 15:07:12,495 Sleeping for 9s. Reason: RUNNING
2024-12-06 15:07:21,761 Sleeping for 6s. Reason: RUNNING
2024-12-06 15:07:28,017 Sleeping for 5s. Reason: RUNNING
2024-12-06 15:07:33,274 Sleeping for 10s. Reason: RUNNING
2024-12-06 15:07:43,553 Sleeping for 6s. Reason: RUNNING
2024-12-06 15:07:49,809 Sleeping for 7s. Reason: RUNNING
2024-12-06 15:07:57,062 Sleeping for 6s. Reason: RUNNING
2024-12-06 15:08:03,329 Sleeping for 8s. Reason: RUNNING
2024-12-06 15:08:11,588 Sleeping for 8s. Reason: RUNNING
2024-12-06 15:08:19,845 Sleeping for 8s. Reason: RUNNING
2024-12-06 15:08:30,091 Sleeping for 9s. Reason: PENDING
2024-12-06 15:08:39,359 Sleeping for 6s. Reason: RUNNING
2024-12-06 15:08:45,613 Sleeping for 10s. Reason: RUNNING
2024-12-06 15:08:55,871 Sleeping for 5s. Reason: RUNNING
2024-12-06 15:09:01,136 Sleeping for 8s. Reason: RUNNING
2024-12-06 15:09:09,388 Sleeping for 9s. Reason: RUNNING
2024-12-06 15:09:18,649 Sleeping for 8s. Reason: RUNNING
2024-12-06 15:09:26,907 Sleeping for 8s. Reason: RUNNING
2024-12-06 15:09:35,161 Sleeping for 7s. Reason: RUNNING
2024-12-06 15:09:42,427 Sleeping for 6s. Reason: RUNNING
2024-12-06 15:09:48,677 Sleeping for 7s. Reason: RUNNING
2024-12-06 15:09:58,635 Setting max_seq=508, max_extra_seq=2048
2024-12-06 15:12:11,309 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.6 pTM=0.55 ipTM=0.154
2024-12-06 15:12:31,084 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.9 pTM=0.568 ipTM=0.185 tol=17.6
2024-12-06 15:12:50,843 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.6 pTM=0.569 ipTM=0.234 tol=17.7
2024-12-06 15:13:10,615 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.4 pTM=0.578 ipTM=0.288 tol=4.16
2024-12-06 15:13:30,403 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.9 pTM=0.573 ipTM=0.364 tol=1.83
2024-12-06 15:13:50,204 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.1 pTM=0.571 ipTM=0.396 tol=1.92
2024-12-06 15:14:10,018 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.3 pTM=0.575 ipTM=0.402 tol=2.25
2024-12-06 15:14:29,841 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.1 pTM=0.573 ipTM=0.41 tol=2.02
2024-12-06 15:14:49,670 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68 pTM=0.572 ipTM=0.403 tol=4.86
2024-12-06 15:15:09,511 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.2 pTM=0.581 ipTM=0.416 tol=3.57
2024-12-06 15:15:29,320 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.9 pTM=0.58 ipTM=0.41 tol=2.65
2024-12-06 15:15:49,165 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.2 pTM=0.566 ipTM=0.406 tol=7.74
2024-12-06 15:16:08,999 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.6 pTM=0.576 ipTM=0.429 tol=6.23
2024-12-06 15:16:28,832 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=68.7 pTM=0.575 ipTM=0.421 tol=4.13
2024-12-06 15:16:48,674 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.1 pTM=0.565 ipTM=0.406 tol=10.8
2024-12-06 15:17:08,502 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.6 pTM=0.61 ipTM=0.367 tol=10.9
2024-12-06 15:17:28,335 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.6 pTM=0.654 ipTM=0.596 tol=3.73
2024-12-06 15:17:48,184 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.2 pTM=0.658 ipTM=0.632 tol=7.12
2024-12-06 15:18:08,025 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.5 pTM=0.656 ipTM=0.635 tol=3.8
2024-12-06 15:18:27,882 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.6 pTM=0.655 ipTM=0.643 tol=4.79
2024-12-06 15:18:47,731 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.6 pTM=0.654 ipTM=0.643 tol=3.35
2024-12-06 15:19:07,565 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.2 pTM=0.661 ipTM=0.648 tol=4.91
2024-12-06 15:19:27,402 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.6 pTM=0.667 ipTM=0.648 tol=2.39
2024-12-06 15:19:47,226 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.6 pTM=0.667 ipTM=0.649 tol=1.81
2024-12-06 15:20:07,044 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.7 pTM=0.67 ipTM=0.651 tol=1.02
2024-12-06 15:20:26,870 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.9 pTM=0.673 ipTM=0.65 tol=0.874
2024-12-06 15:20:46,687 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.9 pTM=0.673 ipTM=0.648 tol=1.31
2024-12-06 15:21:06,506 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.6 pTM=0.668 ipTM=0.644 tol=1.39
2024-12-06 15:21:26,327 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.1 pTM=0.674 ipTM=0.65 tol=1.08
2024-12-06 15:21:46,142 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.6 pTM=0.669 ipTM=0.647 tol=1.27
2024-12-06 15:22:05,976 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74 pTM=0.676 ipTM=0.649 tol=1.23
2024-12-06 15:22:05,977 alphafold2_multimer_v3_model_1_seed_000 took 721.9s (30 recycles)
2024-12-06 15:22:26,482 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.9 pTM=0.545 ipTM=0.205
2024-12-06 15:22:46,387 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.7 pTM=0.564 ipTM=0.211 tol=6.03
2024-12-06 15:23:06,290 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.4 pTM=0.582 ipTM=0.222 tol=5.67
2024-12-06 15:23:26,197 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.6 pTM=0.574 ipTM=0.215 tol=4.1
2024-12-06 15:23:46,087 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.1 pTM=0.587 ipTM=0.22 tol=1.97
2024-12-06 15:24:05,987 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.9 pTM=0.584 ipTM=0.221 tol=1.63
2024-12-06 15:24:25,890 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.9 pTM=0.583 ipTM=0.215 tol=1.94
2024-12-06 15:24:45,789 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.8 pTM=0.583 ipTM=0.218 tol=2.86
2024-12-06 15:25:05,696 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.9 pTM=0.583 ipTM=0.215 tol=1.88
2024-12-06 15:25:25,605 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.6 pTM=0.585 ipTM=0.225 tol=8.4
2024-12-06 15:25:45,502 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.5 pTM=0.578 ipTM=0.204 tol=2.08
2024-12-06 15:26:05,385 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.8 pTM=0.576 ipTM=0.208 tol=6.43
2024-12-06 15:26:25,288 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.6 pTM=0.58 ipTM=0.209 tol=4.93
2024-12-06 15:26:45,181 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69 pTM=0.578 ipTM=0.215 tol=4.76
2024-12-06 15:27:05,068 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69 pTM=0.577 ipTM=0.214 tol=4.11
2024-12-06 15:27:24,947 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.8 pTM=0.576 ipTM=0.212 tol=3.76
2024-12-06 15:27:44,840 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.6 pTM=0.582 ipTM=0.219 tol=2.26
2024-12-06 15:28:04,726 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69 pTM=0.584 ipTM=0.226 tol=3.18
2024-12-06 15:28:24,594 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.9 pTM=0.58 ipTM=0.216 tol=1.8
2024-12-06 15:28:44,463 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.9 pTM=0.583 ipTM=0.225 tol=2.17
2024-12-06 15:29:04,339 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.7 pTM=0.583 ipTM=0.22 tol=1.33
2024-12-06 15:29:24,224 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.9 pTM=0.582 ipTM=0.226 tol=1.35
2024-12-06 15:29:44,100 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69 pTM=0.581 ipTM=0.219 tol=2.25
2024-12-06 15:30:03,977 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69 pTM=0.583 ipTM=0.228 tol=2.31
2024-12-06 15:30:23,848 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.9 pTM=0.579 ipTM=0.222 tol=2.34
2024-12-06 15:30:43,721 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69 pTM=0.581 ipTM=0.222 tol=2.17
2024-12-06 15:31:03,585 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.1 pTM=0.58 ipTM=0.225 tol=3.15
2024-12-06 15:31:23,467 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.9 pTM=0.582 ipTM=0.232 tol=2.35
2024-12-06 15:31:43,329 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.2 pTM=0.584 ipTM=0.237 tol=2.16
2024-12-06 15:32:03,196 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.1 pTM=0.582 ipTM=0.228 tol=2.74
2024-12-06 15:32:23,057 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.3 pTM=0.59 ipTM=0.248 tol=2.29
2024-12-06 15:32:23,058 alphafold2_multimer_v3_model_2_seed_000 took 616.5s (30 recycles)
2024-12-06 15:32:43,684 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.6 pTM=0.562 ipTM=0.139
2024-12-06 15:33:03,638 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71 pTM=0.58 ipTM=0.256 tol=19.8
2024-12-06 15:33:23,559 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.3 pTM=0.602 ipTM=0.489 tol=12.2
2024-12-06 15:33:43,434 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.4 pTM=0.621 ipTM=0.519 tol=4.61
2024-12-06 15:34:03,393 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72 pTM=0.586 ipTM=0.516 tol=8.3
2024-12-06 15:34:23,325 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.9 pTM=0.595 ipTM=0.521 tol=11.9
2024-12-06 15:34:43,229 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.8 pTM=0.599 ipTM=0.521 tol=8.48
2024-12-06 15:35:03,145 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.1 pTM=0.593 ipTM=0.515 tol=3.81
2024-12-06 15:35:23,039 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.1 pTM=0.596 ipTM=0.509 tol=6.91
2024-12-06 15:35:42,952 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.7 pTM=0.595 ipTM=0.517 tol=5.13
2024-12-06 15:36:02,854 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.2 pTM=0.594 ipTM=0.526 tol=3.48
2024-12-06 15:36:22,753 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.4 pTM=0.584 ipTM=0.503 tol=5.47
2024-12-06 15:36:42,672 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.4 pTM=0.586 ipTM=0.509 tol=5.97
2024-12-06 15:37:02,580 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.4 pTM=0.589 ipTM=0.491 tol=6.44
2024-12-06 15:37:22,496 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.9 pTM=0.597 ipTM=0.499 tol=3.54
2024-12-06 15:37:42,377 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.4 pTM=0.595 ipTM=0.487 tol=2.57
2024-12-06 15:38:02,278 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.6 pTM=0.596 ipTM=0.484 tol=1.97
2024-12-06 15:38:22,164 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.7 pTM=0.601 ipTM=0.491 tol=1.65
2024-12-06 15:38:42,079 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.9 pTM=0.594 ipTM=0.489 tol=1.55
2024-12-06 15:39:01,963 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.6 pTM=0.6 ipTM=0.455 tol=1.58
2024-12-06 15:39:21,870 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.6 pTM=0.586 ipTM=0.455 tol=3.86
2024-12-06 15:39:41,753 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.4 pTM=0.596 ipTM=0.448 tol=3.76
2024-12-06 15:40:01,669 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.8 pTM=0.598 ipTM=0.454 tol=2.94
2024-12-06 15:40:21,550 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.3 pTM=0.6 ipTM=0.438 tol=4.14
2024-12-06 15:40:41,455 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.6 pTM=0.595 ipTM=0.435 tol=4.03
2024-12-06 15:41:01,355 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.2 pTM=0.606 ipTM=0.423 tol=3.19
2024-12-06 15:41:21,269 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.5 pTM=0.604 ipTM=0.406 tol=4.48
2024-12-06 15:41:41,180 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70 pTM=0.614 ipTM=0.399 tol=3.66
2024-12-06 15:42:01,085 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.2 pTM=0.622 ipTM=0.418 tol=1.92
2024-12-06 15:42:20,995 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70 pTM=0.612 ipTM=0.384 tol=3.63
2024-12-06 15:42:40,906 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.3 pTM=0.622 ipTM=0.394 tol=3.02
2024-12-06 15:42:40,907 alphafold2_multimer_v3_model_3_seed_000 took 617.2s (30 recycles)
2024-12-06 15:43:01,442 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.9 pTM=0.572 ipTM=0.207
2024-12-06 15:43:21,370 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.7 pTM=0.596 ipTM=0.231 tol=9.18
2024-12-06 15:43:41,297 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.4 pTM=0.601 ipTM=0.233 tol=8.36
2024-12-06 15:44:01,213 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.7 pTM=0.601 ipTM=0.228 tol=4.34
2024-12-06 15:44:21,117 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.8 pTM=0.604 ipTM=0.231 tol=4.19
2024-12-06 15:44:41,053 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.8 pTM=0.603 ipTM=0.224 tol=4.73
2024-12-06 15:45:00,957 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.8 pTM=0.603 ipTM=0.23 tol=3.95
2024-12-06 15:45:20,869 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.8 pTM=0.602 ipTM=0.227 tol=3.66
2024-12-06 15:45:40,748 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.8 pTM=0.603 ipTM=0.235 tol=2.76
2024-12-06 15:46:00,661 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.7 pTM=0.603 ipTM=0.232 tol=2.94
2024-12-06 15:46:20,570 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.6 pTM=0.604 ipTM=0.232 tol=3.55
2024-12-06 15:46:40,479 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.7 pTM=0.599 ipTM=0.226 tol=4.55
2024-12-06 15:47:00,381 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.6 pTM=0.603 ipTM=0.23 tol=3.57
2024-12-06 15:47:20,264 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67.9 pTM=0.601 ipTM=0.232 tol=5.26
2024-12-06 15:47:40,125 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.5 pTM=0.598 ipTM=0.238 tol=2.61
2024-12-06 15:47:59,994 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.8 pTM=0.594 ipTM=0.233 tol=3.47
2024-12-06 15:48:19,878 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.4 pTM=0.597 ipTM=0.24 tol=2.49
2024-12-06 15:48:39,770 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67.9 pTM=0.597 ipTM=0.232 tol=3.32
2024-12-06 15:48:59,655 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.2 pTM=0.598 ipTM=0.23 tol=3.77
2024-12-06 15:49:19,532 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.6 pTM=0.598 ipTM=0.236 tol=3.39
2024-12-06 15:49:39,420 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.4 pTM=0.596 ipTM=0.232 tol=2.07
2024-12-06 15:49:59,316 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.4 pTM=0.597 ipTM=0.234 tol=4.08
2024-12-06 15:50:19,209 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.8 pTM=0.6 ipTM=0.236 tol=2.95
2024-12-06 15:50:39,100 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.4 pTM=0.599 ipTM=0.234 tol=2.87
2024-12-06 15:50:58,992 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67.3 pTM=0.596 ipTM=0.229 tol=4.63
2024-12-06 15:51:18,879 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.6 pTM=0.598 ipTM=0.234 tol=4.68
2024-12-06 15:51:38,760 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.6 pTM=0.595 ipTM=0.233 tol=2.54
2024-12-06 15:51:58,642 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.6 pTM=0.598 ipTM=0.238 tol=2.62
2024-12-06 15:52:18,539 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.9 pTM=0.602 ipTM=0.238 tol=2.37
2024-12-06 15:52:38,440 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.3 pTM=0.598 ipTM=0.238 tol=2.6
2024-12-06 15:52:58,343 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68 pTM=0.597 ipTM=0.224 tol=5.5
2024-12-06 15:52:58,344 alphafold2_multimer_v3_model_4_seed_000 took 616.8s (30 recycles)
2024-12-06 15:53:18,931 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.8 pTM=0.55 ipTM=0.162
2024-12-06 15:53:38,924 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69 pTM=0.577 ipTM=0.178 tol=20.1
2024-12-06 15:53:58,885 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.7 pTM=0.588 ipTM=0.431 tol=5.66
2024-12-06 15:54:18,830 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.4 pTM=0.604 ipTM=0.464 tol=3.74
2024-12-06 15:54:38,759 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.1 pTM=0.607 ipTM=0.49 tol=2.26
2024-12-06 15:54:58,696 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70 pTM=0.614 ipTM=0.498 tol=1.81
2024-12-06 15:55:18,624 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.3 pTM=0.607 ipTM=0.48 tol=1.88
2024-12-06 15:55:38,542 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.8 pTM=0.609 ipTM=0.485 tol=1.36
2024-12-06 15:55:58,477 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.9 pTM=0.606 ipTM=0.472 tol=1.86
2024-12-06 15:56:18,405 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.8 pTM=0.609 ipTM=0.46 tol=1.75
2024-12-06 15:56:38,350 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70 pTM=0.603 ipTM=0.446 tol=1.19
2024-12-06 15:56:58,296 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.4 pTM=0.607 ipTM=0.462 tol=1.47
2024-12-06 15:57:18,234 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.8 pTM=0.606 ipTM=0.471 tol=1.35
2024-12-06 15:57:38,177 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.9 pTM=0.612 ipTM=0.478 tol=1.56
2024-12-06 15:57:58,120 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.3 pTM=0.606 ipTM=0.455 tol=1.49
2024-12-06 15:58:18,052 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.8 pTM=0.604 ipTM=0.463 tol=1.66
2024-12-06 15:58:37,983 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70 pTM=0.606 ipTM=0.455 tol=1.21
2024-12-06 15:58:57,911 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.9 pTM=0.604 ipTM=0.468 tol=1.43
2024-12-06 15:59:17,847 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.4 pTM=0.601 ipTM=0.465 tol=1.33
2024-12-06 15:59:37,803 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.4 pTM=0.602 ipTM=0.458 tol=1.55
2024-12-06 15:59:57,743 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.1 pTM=0.602 ipTM=0.458 tol=1.87
2024-12-06 16:00:17,679 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.1 pTM=0.596 ipTM=0.444 tol=1.7
2024-12-06 16:00:37,618 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.9 pTM=0.597 ipTM=0.437 tol=1.93
2024-12-06 16:00:57,541 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.9 pTM=0.6 ipTM=0.451 tol=1.06
2024-12-06 16:01:17,458 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.1 pTM=0.599 ipTM=0.45 tol=1.08
2024-12-06 16:01:37,378 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.8 pTM=0.596 ipTM=0.438 tol=1.93
2024-12-06 16:01:57,310 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.2 pTM=0.599 ipTM=0.451 tol=1.49
2024-12-06 16:02:17,252 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.4 pTM=0.598 ipTM=0.447 tol=1.39
2024-12-06 16:02:37,174 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.7 pTM=0.6 ipTM=0.464 tol=3.07
2024-12-06 16:02:57,108 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.1 pTM=0.598 ipTM=0.456 tol=2.74
2024-12-06 16:03:17,035 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.1 pTM=0.604 ipTM=0.455 tol=1.81
2024-12-06 16:03:17,036 alphafold2_multimer_v3_model_5_seed_000 took 618.1s (30 recycles)
2024-12-06 16:03:17,645 reranking models by 'multimer' metric
2024-12-06 16:03:20,798 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 16:03:52,907 Relaxation took 35.3s
2024-12-06 16:03:52,907 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74 pTM=0.676 ipTM=0.649
2024-12-06 16:06:00,141 Relaxation took 127.2s
2024-12-06 16:06:00,141 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.1 pTM=0.604 ipTM=0.455
2024-12-06 16:08:05,635 Relaxation took 125.5s
2024-12-06 16:08:05,635 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.3 pTM=0.622 ipTM=0.394
2024-12-06 16:09:46,813 Relaxation took 101.2s
2024-12-06 16:09:46,813 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.3 pTM=0.59 ipTM=0.248
2024-12-06 16:11:26,074 Relaxation took 99.3s
2024-12-06 16:11:26,074 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68 pTM=0.597 ipTM=0.224
2024-12-06 16:11:27,930 Done