2024-12-06 15:19:38,823 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 15:19:39,138 Running on GPU
2024-12-06 15:19:43,060 Found 6 citations for tools or databases
2024-12-06 15:19:43,060 Query 1/1: KBTBD7_AGAP3 (length 1559)
2024-12-06 15:19:43,344 Sleeping for 10s. Reason: PENDING
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2024-12-06 15:22:34,215 Sleeping for 6s. Reason: PENDING
2024-12-06 15:22:40,478 Sleeping for 7s. Reason: RUNNING
2024-12-06 15:22:47,741 Sleeping for 6s. Reason: RUNNING
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2024-12-06 15:22:59,255 Sleeping for 5s. Reason: RUNNING
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2024-12-06 15:23:12,799 Sleeping for 8s. Reason: RUNNING
2024-12-06 15:23:21,077 Sleeping for 7s. Reason: RUNNING
2024-12-06 15:23:28,337 Sleeping for 6s. Reason: RUNNING
2024-12-06 15:23:34,594 Sleeping for 6s. Reason: RUNNING
2024-12-06 15:23:40,859 Sleeping for 10s. Reason: RUNNING
2024-12-06 15:23:51,131 Sleeping for 9s. Reason: RUNNING
2024-12-06 15:24:00,391 Sleeping for 10s. Reason: RUNNING
2024-12-06 15:24:10,660 Sleeping for 8s. Reason: RUNNING
2024-12-06 15:24:18,921 Sleeping for 9s. Reason: RUNNING
2024-12-06 15:24:28,181 Sleeping for 7s. Reason: RUNNING
2024-12-06 15:24:35,446 Sleeping for 10s. Reason: RUNNING
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2024-12-06 15:24:50,964 Sleeping for 9s. Reason: RUNNING
2024-12-06 15:25:06,371 Setting max_seq=508, max_extra_seq=2048
2024-12-06 15:29:06,463 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.8 pTM=0.442 ipTM=0.209
2024-12-06 15:30:19,334 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.3 pTM=0.459 ipTM=0.505 tol=10.3
2024-12-06 15:31:32,297 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.4 pTM=0.455 ipTM=0.496 tol=6.82
2024-12-06 15:32:45,325 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.4 pTM=0.454 ipTM=0.499 tol=3.01
2024-12-06 15:33:58,403 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.4 pTM=0.45 ipTM=0.487 tol=4
2024-12-06 15:35:11,534 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.1 pTM=0.448 ipTM=0.485 tol=3.25
2024-12-06 15:36:24,713 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.2 pTM=0.444 ipTM=0.471 tol=2.01
2024-12-06 15:37:37,858 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.3 pTM=0.441 ipTM=0.463 tol=1.97
2024-12-06 15:38:50,987 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.4 pTM=0.443 ipTM=0.461 tol=2.76
2024-12-06 15:40:04,103 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.6 pTM=0.441 ipTM=0.475 tol=1.95
2024-12-06 15:41:17,243 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.8 pTM=0.444 ipTM=0.478 tol=3.1
2024-12-06 15:42:30,388 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.5 pTM=0.443 ipTM=0.483 tol=4.76
2024-12-06 15:43:43,553 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64 pTM=0.448 ipTM=0.48 tol=5.11
2024-12-06 15:44:56,729 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.8 pTM=0.44 ipTM=0.478 tol=8.68
2024-12-06 15:46:09,836 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64 pTM=0.435 ipTM=0.469 tol=4.95
2024-12-06 15:47:22,926 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.9 pTM=0.432 ipTM=0.458 tol=4.7
2024-12-06 15:48:36,046 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64 pTM=0.433 ipTM=0.447 tol=4.38
2024-12-06 15:49:49,209 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.4 pTM=0.432 ipTM=0.461 tol=4.39
2024-12-06 15:51:02,330 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.8 pTM=0.437 ipTM=0.458 tol=3.7
2024-12-06 15:52:15,424 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.2 pTM=0.433 ipTM=0.458 tol=2.97
2024-12-06 15:53:28,562 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.8 pTM=0.429 ipTM=0.446 tol=3.58
2024-12-06 15:54:41,782 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.4 pTM=0.432 ipTM=0.449 tol=3.94
2024-12-06 15:55:54,946 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64 pTM=0.434 ipTM=0.464 tol=2.89
2024-12-06 15:57:08,070 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.1 pTM=0.435 ipTM=0.461 tol=4.66
2024-12-06 15:58:21,156 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.2 pTM=0.435 ipTM=0.468 tol=4.23
2024-12-06 15:59:34,310 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.4 pTM=0.432 ipTM=0.462 tol=4.16
2024-12-06 16:00:47,451 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.2 pTM=0.432 ipTM=0.47 tol=4.69
2024-12-06 16:02:00,597 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.1 pTM=0.429 ipTM=0.454 tol=3.6
2024-12-06 16:03:13,746 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.9 pTM=0.43 ipTM=0.451 tol=3.07
2024-12-06 16:04:26,929 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.1 pTM=0.427 ipTM=0.438 tol=2.55
2024-12-06 16:05:40,097 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.9 pTM=0.435 ipTM=0.458 tol=4.12
2024-12-06 16:05:40,098 alphafold2_multimer_v3_model_1_seed_000 took 2428.5s (30 recycles)
2024-12-06 16:06:54,748 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.3 pTM=0.433 ipTM=0.285
2024-12-06 16:08:07,887 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.8 pTM=0.457 ipTM=0.46 tol=13.3
2024-12-06 16:09:21,079 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.6 pTM=0.447 ipTM=0.429 tol=7.07
2024-12-06 16:10:34,348 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.1 pTM=0.445 ipTM=0.415 tol=3.69
2024-12-06 16:11:47,591 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.1 pTM=0.44 ipTM=0.391 tol=5.19
2024-12-06 16:13:00,771 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.9 pTM=0.441 ipTM=0.362 tol=3.55
2024-12-06 16:14:13,962 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.9 pTM=0.435 ipTM=0.32 tol=4.21
2024-12-06 16:15:27,160 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.9 pTM=0.436 ipTM=0.273 tol=3.15
2024-12-06 16:16:40,424 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.9 pTM=0.435 ipTM=0.193 tol=3.09
2024-12-06 16:17:53,683 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65 pTM=0.435 ipTM=0.175 tol=5.14
2024-12-06 16:19:06,960 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.3 pTM=0.436 ipTM=0.233 tol=4.88
2024-12-06 16:20:20,231 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.1 pTM=0.436 ipTM=0.227 tol=2.76
2024-12-06 16:21:33,518 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.2 pTM=0.435 ipTM=0.18 tol=2.69
2024-12-06 16:22:46,813 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.2 pTM=0.435 ipTM=0.215 tol=2.44
2024-12-06 16:24:00,088 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.1 pTM=0.433 ipTM=0.244 tol=3.06
2024-12-06 16:25:13,370 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.1 pTM=0.436 ipTM=0.263 tol=2.81
2024-12-06 16:26:26,666 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.2 pTM=0.434 ipTM=0.201 tol=2.48
2024-12-06 16:27:39,882 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.2 pTM=0.436 ipTM=0.19 tol=2.2
2024-12-06 16:28:53,124 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.9 pTM=0.437 ipTM=0.179 tol=1.72
2024-12-06 16:30:06,367 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.9 pTM=0.434 ipTM=0.202 tol=2.07
2024-12-06 16:31:19,627 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.2 pTM=0.432 ipTM=0.218 tol=2.95
2024-12-06 16:32:32,809 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.1 pTM=0.431 ipTM=0.227 tol=3.25
2024-12-06 16:33:46,020 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.2 pTM=0.435 ipTM=0.247 tol=3.76
2024-12-06 16:34:59,231 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.2 pTM=0.436 ipTM=0.287 tol=2.95
2024-12-06 16:36:12,522 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.4 pTM=0.432 ipTM=0.281 tol=2.26
2024-12-06 16:37:25,719 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.4 pTM=0.431 ipTM=0.269 tol=3
2024-12-06 16:38:38,911 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.2 pTM=0.434 ipTM=0.294 tol=3.12
2024-12-06 16:39:52,038 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.2 pTM=0.433 ipTM=0.298 tol=3.03
2024-12-06 16:41:05,238 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.4 pTM=0.432 ipTM=0.28 tol=2.42
2024-12-06 16:42:18,470 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.2 pTM=0.431 ipTM=0.255 tol=2.11
2024-12-06 16:43:31,714 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65 pTM=0.432 ipTM=0.246 tol=2.08
2024-12-06 16:43:31,715 alphafold2_multimer_v3_model_2_seed_000 took 2270.2s (30 recycles)
2024-12-06 16:44:46,515 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.5 pTM=0.439 ipTM=0.336
2024-12-06 16:45:59,886 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.8 pTM=0.45 ipTM=0.457 tol=20.6
2024-12-06 16:47:13,209 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.9 pTM=0.454 ipTM=0.416 tol=13.6
2024-12-06 16:48:26,629 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.2 pTM=0.444 ipTM=0.407 tol=10.6
2024-12-06 16:49:39,955 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65 pTM=0.455 ipTM=0.373 tol=14.4
2024-12-06 16:50:53,275 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.7 pTM=0.445 ipTM=0.329 tol=18.3
2024-12-06 16:52:06,560 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.3 pTM=0.455 ipTM=0.359 tol=18
2024-12-06 16:53:19,753 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.5 pTM=0.458 ipTM=0.324 tol=8.45
2024-12-06 16:54:32,992 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.6 pTM=0.457 ipTM=0.284 tol=7.63
2024-12-06 16:55:46,194 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.1 pTM=0.469 ipTM=0.343 tol=19.9
2024-12-06 16:56:59,488 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.1 pTM=0.448 ipTM=0.323 tol=19.4
2024-12-06 16:58:12,691 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.1 pTM=0.453 ipTM=0.319 tol=8.32
2024-12-06 16:59:25,994 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.8 pTM=0.454 ipTM=0.229 tol=6.79
2024-12-06 17:00:39,375 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.2 pTM=0.446 ipTM=0.339 tol=16.7
2024-12-06 17:01:52,751 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.6 pTM=0.45 ipTM=0.305 tol=18.1
2024-12-06 17:03:06,058 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.1 pTM=0.453 ipTM=0.284 tol=13
2024-12-06 17:04:19,413 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.3 pTM=0.449 ipTM=0.214 tol=7.95
2024-12-06 17:05:32,767 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.9 pTM=0.442 ipTM=0.296 tol=15.5
2024-12-06 17:06:46,129 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.5 pTM=0.449 ipTM=0.307 tol=19.2
2024-12-06 17:07:59,368 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.6 pTM=0.485 ipTM=0.377 tol=20.2
2024-12-06 17:09:12,805 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.2 pTM=0.442 ipTM=0.367 tol=17.8
2024-12-06 17:10:26,132 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.9 pTM=0.453 ipTM=0.325 tol=14.3
2024-12-06 17:11:39,453 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.5 pTM=0.452 ipTM=0.254 tol=6.83
2024-12-06 17:12:52,751 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.2 pTM=0.451 ipTM=0.288 tol=4.09
2024-12-06 17:14:06,109 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.7 pTM=0.455 ipTM=0.214 tol=10.8
2024-12-06 17:15:19,427 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.9 pTM=0.443 ipTM=0.327 tol=17.1
2024-12-06 17:16:32,750 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.9 pTM=0.451 ipTM=0.305 tol=17.1
2024-12-06 17:17:46,003 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.6 pTM=0.466 ipTM=0.353 tol=20.5
2024-12-06 17:18:59,366 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.2 pTM=0.441 ipTM=0.338 tol=11.9
2024-12-06 17:20:12,694 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.4 pTM=0.447 ipTM=0.279 tol=14.3
2024-12-06 17:21:25,903 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.5 pTM=0.487 ipTM=0.385 tol=19.3
2024-12-06 17:21:25,905 alphafold2_multimer_v3_model_3_seed_000 took 2272.7s (30 recycles)
2024-12-06 17:22:40,544 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.2 pTM=0.444 ipTM=0.253
2024-12-06 17:23:53,797 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63 pTM=0.453 ipTM=0.485 tol=16.9
2024-12-06 17:25:07,101 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.7 pTM=0.446 ipTM=0.209 tol=8.84
2024-12-06 17:26:20,359 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.8 pTM=0.461 ipTM=0.244 tol=9.52
2024-12-06 17:27:33,654 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.9 pTM=0.451 ipTM=0.214 tol=7.14
2024-12-06 17:28:46,920 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63 pTM=0.459 ipTM=0.216 tol=8.12
2024-12-06 17:30:00,229 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.3 pTM=0.451 ipTM=0.211 tol=7.87
2024-12-06 17:31:13,529 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.2 pTM=0.458 ipTM=0.241 tol=6.33
2024-12-06 17:32:26,813 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.8 pTM=0.46 ipTM=0.227 tol=8.88
2024-12-06 17:33:40,075 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.6 pTM=0.458 ipTM=0.218 tol=10.5
2024-12-06 17:34:53,430 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.1 pTM=0.456 ipTM=0.213 tol=9.67
2024-12-06 17:36:06,758 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64 pTM=0.455 ipTM=0.217 tol=8.3
2024-12-06 17:37:19,954 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.9 pTM=0.47 ipTM=0.288 tol=17.7
2024-12-06 17:38:33,251 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63 pTM=0.449 ipTM=0.186 tol=12.1
2024-12-06 17:39:46,513 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.6 pTM=0.451 ipTM=0.219 tol=10.1
2024-12-06 17:40:59,829 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64 pTM=0.455 ipTM=0.23 tol=7.67
2024-12-06 17:42:13,131 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.1 pTM=0.449 ipTM=0.192 tol=12.8
2024-12-06 17:43:26,456 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.5 pTM=0.46 ipTM=0.22 tol=7.12
2024-12-06 17:44:39,736 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.1 pTM=0.458 ipTM=0.244 tol=7.6
2024-12-06 17:45:53,069 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.2 pTM=0.457 ipTM=0.239 tol=5.61
2024-12-06 17:47:06,382 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.1 pTM=0.453 ipTM=0.227 tol=6.17
2024-12-06 17:48:19,683 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.5 pTM=0.45 ipTM=0.205 tol=8.2
2024-12-06 17:49:32,968 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.9 pTM=0.451 ipTM=0.199 tol=7.93
2024-12-06 17:50:46,251 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.6 pTM=0.451 ipTM=0.192 tol=8.99
2024-12-06 17:51:59,510 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.8 pTM=0.448 ipTM=0.19 tol=6.42
2024-12-06 17:53:12,753 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.8 pTM=0.453 ipTM=0.202 tol=6.42
2024-12-06 17:54:26,078 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.3 pTM=0.454 ipTM=0.218 tol=8.84
2024-12-06 17:55:39,378 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.7 pTM=0.452 ipTM=0.223 tol=8.8
2024-12-06 17:56:52,699 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.1 pTM=0.448 ipTM=0.2 tol=8.12
2024-12-06 17:58:06,008 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.7 pTM=0.448 ipTM=0.204 tol=8.45
2024-12-06 17:59:19,328 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.1 pTM=0.45 ipTM=0.205 tol=7.31
2024-12-06 17:59:19,330 alphafold2_multimer_v3_model_4_seed_000 took 2272.0s (30 recycles)
2024-12-06 18:00:34,037 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.4 pTM=0.432 ipTM=0.246
2024-12-06 18:01:47,420 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.7 pTM=0.443 ipTM=0.433 tol=19
2024-12-06 18:03:00,828 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.5 pTM=0.446 ipTM=0.397 tol=19.9
2024-12-06 18:04:14,228 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.9 pTM=0.454 ipTM=0.328 tol=10
2024-12-06 18:05:27,553 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.1 pTM=0.461 ipTM=0.356 tol=7.4
2024-12-06 18:06:40,935 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.2 pTM=0.454 ipTM=0.386 tol=5.02
2024-12-06 18:07:54,218 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.4 pTM=0.455 ipTM=0.366 tol=8.38
2024-12-06 18:09:07,533 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.1 pTM=0.455 ipTM=0.406 tol=14.9
2024-12-06 18:10:20,939 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.2 pTM=0.455 ipTM=0.405 tol=14.5
2024-12-06 18:11:34,293 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.8 pTM=0.458 ipTM=0.4 tol=6.07
2024-12-06 18:12:47,555 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.6 pTM=0.457 ipTM=0.399 tol=6.54
2024-12-06 18:14:00,759 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.8 pTM=0.47 ipTM=0.422 tol=4.86
2024-12-06 18:15:13,957 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.6 pTM=0.458 ipTM=0.41 tol=7.78
2024-12-06 18:16:27,264 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.8 pTM=0.45 ipTM=0.387 tol=7.89
2024-12-06 18:17:40,612 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.4 pTM=0.444 ipTM=0.386 tol=6.31
2024-12-06 18:18:54,037 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.3 pTM=0.442 ipTM=0.394 tol=12.6
2024-12-06 18:20:07,431 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.1 pTM=0.445 ipTM=0.386 tol=10.8
2024-12-06 18:21:20,764 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.7 pTM=0.446 ipTM=0.386 tol=7.06
2024-12-06 18:22:34,078 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.3 pTM=0.45 ipTM=0.376 tol=5.64
2024-12-06 18:23:47,316 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.7 pTM=0.461 ipTM=0.384 tol=9.65
2024-12-06 18:25:00,535 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.6 pTM=0.451 ipTM=0.382 tol=8.62
2024-12-06 18:26:13,739 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.8 pTM=0.467 ipTM=0.41 tol=5.47
2024-12-06 18:27:26,882 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.9 pTM=0.484 ipTM=0.411 tol=5.59
2024-12-06 18:28:40,069 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.7 pTM=0.474 ipTM=0.372 tol=2.37
2024-12-06 18:29:53,309 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.8 pTM=0.462 ipTM=0.401 tol=7.06
2024-12-06 18:31:06,548 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.4 pTM=0.45 ipTM=0.358 tol=6.57
2024-12-06 18:32:19,816 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.9 pTM=0.451 ipTM=0.438 tol=17.2
2024-12-06 18:33:33,129 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.5 pTM=0.448 ipTM=0.411 tol=9.73
2024-12-06 18:34:46,532 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.5 pTM=0.448 ipTM=0.418 tol=8.01
2024-12-06 18:35:59,913 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.9 pTM=0.449 ipTM=0.404 tol=5.17
2024-12-06 18:37:13,285 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65 pTM=0.459 ipTM=0.422 tol=10.6
2024-12-06 18:37:13,286 alphafold2_multimer_v3_model_5_seed_000 took 2272.5s (30 recycles)
2024-12-06 18:37:14,708 reranking models by 'multimer' metric
2024-12-06 18:37:18,977 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 18:39:56,901 Relaxation took 162.2s
2024-12-06 18:39:56,901 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.9 pTM=0.435 ipTM=0.458
2024-12-06 18:44:45,049 Relaxation took 288.1s
2024-12-06 18:44:45,049 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65 pTM=0.459 ipTM=0.422
2024-12-06 18:48:18,905 Relaxation took 213.9s
2024-12-06 18:48:18,905 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.5 pTM=0.487 ipTM=0.385
2024-12-06 18:52:04,732 Relaxation took 225.8s
2024-12-06 18:52:04,733 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65 pTM=0.432 ipTM=0.246
2024-12-06 18:56:11,104 Relaxation took 246.4s
2024-12-06 18:56:11,105 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.1 pTM=0.45 ipTM=0.205
2024-12-06 18:56:15,135 Done