2024-12-06 16:24:28,090 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 16:24:28,451 Running on GPU
2024-12-06 16:24:32,549 Found 6 citations for tools or databases
2024-12-06 16:24:32,550 Query 1/1: KBTBD7_MRPS26 (length 889)
2024-12-06 16:24:32,848 Sleeping for 8s. Reason: PENDING
2024-12-06 16:24:41,106 Sleeping for 8s. Reason: RUNNING
2024-12-06 16:24:49,363 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:24:59,628 Sleeping for 5s. Reason: RUNNING
2024-12-06 16:25:04,889 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:25:15,143 Sleeping for 7s. Reason: RUNNING
2024-12-06 16:25:22,396 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:25:32,659 Sleeping for 8s. Reason: RUNNING
2024-12-06 16:25:40,913 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:25:51,174 Sleeping for 8s. Reason: RUNNING
2024-12-06 16:25:59,429 Sleeping for 6s. Reason: RUNNING
2024-12-06 16:26:07,146 Sleeping for 8s. Reason: PENDING
2024-12-06 16:26:15,398 Sleeping for 6s. Reason: RUNNING
2024-12-06 16:26:21,661 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:26:31,924 Sleeping for 7s. Reason: RUNNING
2024-12-06 16:26:39,194 Sleeping for 5s. Reason: RUNNING
2024-12-06 16:26:44,595 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:26:54,852 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:27:05,111 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:27:15,370 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:27:28,499 Setting max_seq=508, max_extra_seq=2048
2024-12-06 16:31:17,744 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.2 pTM=0.599 ipTM=0.258
2024-12-06 16:31:38,118 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.8 pTM=0.6 ipTM=0.141 tol=14.4
2024-12-06 16:31:58,521 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.1 pTM=0.605 ipTM=0.145 tol=7.65
2024-12-06 16:32:18,977 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.1 pTM=0.603 ipTM=0.156 tol=4.33
2024-12-06 16:32:39,456 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.2 pTM=0.604 ipTM=0.157 tol=3.36
2024-12-06 16:32:59,971 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.1 pTM=0.598 ipTM=0.154 tol=3.94
2024-12-06 16:33:20,502 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70 pTM=0.602 ipTM=0.156 tol=3.45
2024-12-06 16:33:41,069 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.6 pTM=0.604 ipTM=0.154 tol=4.45
2024-12-06 16:34:01,605 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.8 pTM=0.601 ipTM=0.16 tol=3.15
2024-12-06 16:34:22,161 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.3 pTM=0.604 ipTM=0.162 tol=2.85
2024-12-06 16:34:42,743 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70 pTM=0.6 ipTM=0.158 tol=2.76
2024-12-06 16:35:03,297 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.4 pTM=0.601 ipTM=0.15 tol=2.93
2024-12-06 16:35:23,848 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.4 pTM=0.601 ipTM=0.157 tol=4.43
2024-12-06 16:35:44,411 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70 pTM=0.602 ipTM=0.153 tol=3.47
2024-12-06 16:36:04,992 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.9 pTM=0.6 ipTM=0.155 tol=3.5
2024-12-06 16:36:25,552 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.2 pTM=0.598 ipTM=0.153 tol=4.83
2024-12-06 16:36:46,114 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.8 pTM=0.599 ipTM=0.154 tol=4.2
2024-12-06 16:37:06,672 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.1 pTM=0.603 ipTM=0.155 tol=3.67
2024-12-06 16:37:27,220 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.8 pTM=0.596 ipTM=0.153 tol=2.82
2024-12-06 16:37:47,774 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.1 pTM=0.6 ipTM=0.157 tol=3.38
2024-12-06 16:38:08,342 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.9 pTM=0.596 ipTM=0.154 tol=3.79
2024-12-06 16:38:28,896 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.9 pTM=0.598 ipTM=0.156 tol=2.98
2024-12-06 16:38:49,443 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.8 pTM=0.601 ipTM=0.153 tol=2.88
2024-12-06 16:39:09,993 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.9 pTM=0.601 ipTM=0.158 tol=2.93
2024-12-06 16:39:30,550 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.9 pTM=0.604 ipTM=0.152 tol=4.23
2024-12-06 16:39:51,105 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.1 pTM=0.604 ipTM=0.157 tol=2.54
2024-12-06 16:40:11,667 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.9 pTM=0.606 ipTM=0.161 tol=2.7
2024-12-06 16:40:32,220 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.2 pTM=0.604 ipTM=0.157 tol=3.12
2024-12-06 16:40:52,764 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.9 pTM=0.603 ipTM=0.156 tol=3.05
2024-12-06 16:41:13,316 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.8 pTM=0.602 ipTM=0.164 tol=3.37
2024-12-06 16:41:33,861 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.1 pTM=0.599 ipTM=0.153 tol=3.03
2024-12-06 16:41:33,861 alphafold2_multimer_v3_model_1_seed_000 took 838.4s (30 recycles)
2024-12-06 16:41:55,048 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.4 pTM=0.574 ipTM=0.175
2024-12-06 16:42:15,637 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.1 pTM=0.607 ipTM=0.15 tol=9.39
2024-12-06 16:42:36,226 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.1 pTM=0.601 ipTM=0.161 tol=14.7
2024-12-06 16:42:56,788 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.8 pTM=0.609 ipTM=0.189 tol=16.1
2024-12-06 16:43:17,384 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.1 pTM=0.609 ipTM=0.139 tol=8.41
2024-12-06 16:43:37,976 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.5 pTM=0.611 ipTM=0.14 tol=6.59
2024-12-06 16:43:58,579 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.4 pTM=0.613 ipTM=0.127 tol=15.2
2024-12-06 16:44:19,171 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.2 pTM=0.615 ipTM=0.136 tol=6.54
2024-12-06 16:44:39,750 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=72.6 pTM=0.614 ipTM=0.139 tol=3.12
2024-12-06 16:45:00,330 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=72.4 pTM=0.614 ipTM=0.145 tol=2
2024-12-06 16:45:20,893 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.6 pTM=0.611 ipTM=0.146 tol=3.6
2024-12-06 16:45:41,478 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.5 pTM=0.613 ipTM=0.142 tol=2.82
2024-12-06 16:46:02,054 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.4 pTM=0.614 ipTM=0.143 tol=2.41
2024-12-06 16:46:22,617 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.2 pTM=0.614 ipTM=0.142 tol=1.99
2024-12-06 16:46:43,199 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.4 pTM=0.611 ipTM=0.145 tol=4.64
2024-12-06 16:47:03,780 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.2 pTM=0.609 ipTM=0.14 tol=2.97
2024-12-06 16:47:24,367 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.4 pTM=0.614 ipTM=0.144 tol=1.65
2024-12-06 16:47:44,927 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.2 pTM=0.614 ipTM=0.144 tol=3.85
2024-12-06 16:48:05,485 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.4 pTM=0.614 ipTM=0.145 tol=1.88
2024-12-06 16:48:26,049 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.1 pTM=0.616 ipTM=0.143 tol=4.42
2024-12-06 16:48:46,612 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.8 pTM=0.613 ipTM=0.148 tol=3.44
2024-12-06 16:49:07,174 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.6 pTM=0.612 ipTM=0.145 tol=2.8
2024-12-06 16:49:27,739 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.6 pTM=0.608 ipTM=0.137 tol=2.55
2024-12-06 16:49:48,307 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.7 pTM=0.61 ipTM=0.13 tol=5.29
2024-12-06 16:50:08,892 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.4 pTM=0.614 ipTM=0.138 tol=15.2
2024-12-06 16:50:29,467 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.5 pTM=0.612 ipTM=0.134 tol=5.86
2024-12-06 16:50:50,044 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.8 pTM=0.612 ipTM=0.133 tol=9.11
2024-12-06 16:51:10,632 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.2 pTM=0.611 ipTM=0.132 tol=5.76
2024-12-06 16:51:31,202 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.9 pTM=0.611 ipTM=0.142 tol=3.22
2024-12-06 16:51:51,768 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.2 pTM=0.612 ipTM=0.147 tol=6.28
2024-12-06 16:52:12,342 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.6 pTM=0.608 ipTM=0.137 tol=8.91
2024-12-06 16:52:12,343 alphafold2_multimer_v3_model_2_seed_000 took 637.9s (30 recycles)
2024-12-06 16:52:33,623 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.6 pTM=0.604 ipTM=0.119
2024-12-06 16:52:54,254 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70.4 pTM=0.625 ipTM=0.145 tol=15.7
2024-12-06 16:53:14,856 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.4 pTM=0.635 ipTM=0.157 tol=7.92
2024-12-06 16:53:35,452 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.3 pTM=0.632 ipTM=0.147 tol=3.08
2024-12-06 16:53:56,064 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.5 pTM=0.639 ipTM=0.151 tol=3.31
2024-12-06 16:54:16,653 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70 pTM=0.636 ipTM=0.153 tol=2.51
2024-12-06 16:54:37,290 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.5 pTM=0.642 ipTM=0.159 tol=2.79
2024-12-06 16:54:57,906 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.6 pTM=0.641 ipTM=0.154 tol=2.73
2024-12-06 16:55:18,503 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.5 pTM=0.638 ipTM=0.151 tol=2.64
2024-12-06 16:55:39,115 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.5 pTM=0.637 ipTM=0.151 tol=1.8
2024-12-06 16:55:59,709 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.4 pTM=0.634 ipTM=0.152 tol=2.34
2024-12-06 16:56:20,318 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.5 pTM=0.637 ipTM=0.15 tol=2.53
2024-12-06 16:56:40,942 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.6 pTM=0.639 ipTM=0.157 tol=1.5
2024-12-06 16:57:01,558 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.6 pTM=0.638 ipTM=0.147 tol=1.42
2024-12-06 16:57:22,159 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.4 pTM=0.637 ipTM=0.152 tol=1.69
2024-12-06 16:57:42,772 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.4 pTM=0.638 ipTM=0.149 tol=1.68
2024-12-06 16:58:03,381 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.8 pTM=0.639 ipTM=0.145 tol=1.64
2024-12-06 16:58:23,991 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.5 pTM=0.639 ipTM=0.142 tol=1.47
2024-12-06 16:58:44,584 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.3 pTM=0.637 ipTM=0.143 tol=1.75
2024-12-06 16:59:05,212 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.4 pTM=0.639 ipTM=0.137 tol=1.5
2024-12-06 16:59:25,798 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70 pTM=0.635 ipTM=0.147 tol=3.01
2024-12-06 16:59:46,396 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.3 pTM=0.635 ipTM=0.142 tol=2.32
2024-12-06 17:00:07,013 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.4 pTM=0.637 ipTM=0.142 tol=2.21
2024-12-06 17:00:27,612 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.4 pTM=0.635 ipTM=0.138 tol=1.36
2024-12-06 17:00:48,226 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.6 pTM=0.638 ipTM=0.138 tol=0.963
2024-12-06 17:01:08,837 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.6 pTM=0.638 ipTM=0.139 tol=2.58
2024-12-06 17:01:29,459 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.5 pTM=0.639 ipTM=0.144 tol=2.86
2024-12-06 17:01:50,061 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.3 pTM=0.635 ipTM=0.145 tol=1.7
2024-12-06 17:02:10,653 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.5 pTM=0.634 ipTM=0.143 tol=2.23
2024-12-06 17:02:31,250 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.5 pTM=0.635 ipTM=0.139 tol=1.44
2024-12-06 17:02:51,847 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.3 pTM=0.635 ipTM=0.145 tol=2.41
2024-12-06 17:02:51,847 alphafold2_multimer_v3_model_3_seed_000 took 638.9s (30 recycles)
2024-12-06 17:03:13,102 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.9 pTM=0.604 ipTM=0.143
2024-12-06 17:03:33,686 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.4 pTM=0.623 ipTM=0.144 tol=9.35
2024-12-06 17:03:54,292 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.9 pTM=0.626 ipTM=0.139 tol=6.68
2024-12-06 17:04:14,872 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.1 pTM=0.629 ipTM=0.152 tol=5.52
2024-12-06 17:04:35,465 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.3 pTM=0.633 ipTM=0.148 tol=4.14
2024-12-06 17:04:56,054 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.9 pTM=0.631 ipTM=0.153 tol=2.16
2024-12-06 17:05:16,647 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69 pTM=0.635 ipTM=0.155 tol=3.3
2024-12-06 17:05:37,238 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.2 pTM=0.636 ipTM=0.158 tol=4.2
2024-12-06 17:05:57,810 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.6 pTM=0.63 ipTM=0.157 tol=3.64
2024-12-06 17:06:18,394 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69 pTM=0.634 ipTM=0.155 tol=2.17
2024-12-06 17:06:38,964 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.8 pTM=0.629 ipTM=0.158 tol=2.19
2024-12-06 17:06:59,548 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.2 pTM=0.635 ipTM=0.161 tol=3.92
2024-12-06 17:07:20,122 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.6 pTM=0.634 ipTM=0.154 tol=2.58
2024-12-06 17:07:40,703 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.3 pTM=0.634 ipTM=0.15 tol=7.41
2024-12-06 17:08:01,264 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.8 pTM=0.639 ipTM=0.185 tol=10.4
2024-12-06 17:08:21,825 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.9 pTM=0.632 ipTM=0.164 tol=3.96
2024-12-06 17:08:42,403 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.1 pTM=0.634 ipTM=0.152 tol=5.03
2024-12-06 17:09:02,971 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.4 pTM=0.636 ipTM=0.153 tol=3.16
2024-12-06 17:09:23,544 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.9 pTM=0.633 ipTM=0.157 tol=3.12
2024-12-06 17:09:44,125 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.1 pTM=0.638 ipTM=0.158 tol=2.22
2024-12-06 17:10:04,705 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.1 pTM=0.634 ipTM=0.153 tol=2.72
2024-12-06 17:10:25,276 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69 pTM=0.634 ipTM=0.155 tol=2.44
2024-12-06 17:10:45,866 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.1 pTM=0.633 ipTM=0.15 tol=2.1
2024-12-06 17:11:06,448 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.6 pTM=0.633 ipTM=0.153 tol=2.43
2024-12-06 17:11:27,053 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.2 pTM=0.638 ipTM=0.154 tol=2.96
2024-12-06 17:11:47,663 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.1 pTM=0.635 ipTM=0.151 tol=1.92
2024-12-06 17:12:08,265 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.3 pTM=0.639 ipTM=0.157 tol=2.85
2024-12-06 17:12:28,860 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69 pTM=0.639 ipTM=0.16 tol=3.03
2024-12-06 17:12:49,463 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.3 pTM=0.635 ipTM=0.159 tol=2.76
2024-12-06 17:13:10,051 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69 pTM=0.635 ipTM=0.159 tol=4.22
2024-12-06 17:13:30,640 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.1 pTM=0.635 ipTM=0.154 tol=3.76
2024-12-06 17:13:30,641 alphafold2_multimer_v3_model_4_seed_000 took 638.2s (30 recycles)
2024-12-06 17:13:51,934 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.8 pTM=0.577 ipTM=0.178
2024-12-06 17:14:12,595 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.3 pTM=0.606 ipTM=0.146 tol=14.1
2024-12-06 17:14:33,226 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.2 pTM=0.617 ipTM=0.171 tol=5.47
2024-12-06 17:14:53,888 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.7 pTM=0.617 ipTM=0.145 tol=7.13
2024-12-06 17:15:14,541 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.9 pTM=0.62 ipTM=0.149 tol=3.38
2024-12-06 17:15:35,184 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.9 pTM=0.62 ipTM=0.146 tol=3.48
2024-12-06 17:15:55,842 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.4 pTM=0.623 ipTM=0.139 tol=3.42
2024-12-06 17:16:16,512 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.4 pTM=0.627 ipTM=0.145 tol=2.82
2024-12-06 17:16:37,173 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.3 pTM=0.622 ipTM=0.141 tol=4.5
2024-12-06 17:16:57,825 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.4 pTM=0.624 ipTM=0.142 tol=4.09
2024-12-06 17:17:18,466 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.6 pTM=0.62 ipTM=0.134 tol=4.17
2024-12-06 17:17:39,111 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.4 pTM=0.625 ipTM=0.145 tol=2.52
2024-12-06 17:17:59,769 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.8 pTM=0.625 ipTM=0.125 tol=13.3
2024-12-06 17:18:20,450 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.6 pTM=0.627 ipTM=0.12 tol=9.22
2024-12-06 17:18:41,105 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69 pTM=0.628 ipTM=0.145 tol=8.1
2024-12-06 17:19:01,777 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69 pTM=0.624 ipTM=0.128 tol=13.1
2024-12-06 17:19:22,441 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.1 pTM=0.629 ipTM=0.17 tol=5.06
2024-12-06 17:19:43,096 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.4 pTM=0.629 ipTM=0.144 tol=8.47
2024-12-06 17:20:03,757 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.7 pTM=0.626 ipTM=0.148 tol=15.1
2024-12-06 17:20:24,442 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.5 pTM=0.628 ipTM=0.133 tol=13.8
2024-12-06 17:20:45,105 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.1 pTM=0.625 ipTM=0.135 tol=5.76
2024-12-06 17:21:05,752 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.8 pTM=0.625 ipTM=0.143 tol=6.7
2024-12-06 17:21:26,388 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.9 pTM=0.625 ipTM=0.157 tol=3.31
2024-12-06 17:21:47,025 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.3 pTM=0.624 ipTM=0.153 tol=2.27
2024-12-06 17:22:07,669 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.5 pTM=0.624 ipTM=0.134 tol=13.8
2024-12-06 17:22:28,336 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.1 pTM=0.624 ipTM=0.124 tol=13.8
2024-12-06 17:22:48,980 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.6 pTM=0.625 ipTM=0.163 tol=8.89
2024-12-06 17:23:09,632 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.2 pTM=0.625 ipTM=0.142 tol=5.21
2024-12-06 17:23:30,273 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.4 pTM=0.624 ipTM=0.151 tol=16.6
2024-12-06 17:23:50,915 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.6 pTM=0.622 ipTM=0.133 tol=15.5
2024-12-06 17:24:11,565 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.2 pTM=0.619 ipTM=0.12 tol=7.46
2024-12-06 17:24:11,566 alphafold2_multimer_v3_model_5_seed_000 took 640.3s (30 recycles)
2024-12-06 17:24:12,196 reranking models by 'multimer' metric
2024-12-06 17:24:15,904 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 17:25:26,625 Relaxation took 74.4s
2024-12-06 17:25:26,625 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.1 pTM=0.635 ipTM=0.154
2024-12-06 17:27:10,906 Relaxation took 104.3s
2024-12-06 17:27:10,906 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.3 pTM=0.635 ipTM=0.145
2024-12-06 17:28:46,230 Relaxation took 95.3s
2024-12-06 17:28:46,230 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.1 pTM=0.599 ipTM=0.153
2024-12-06 17:30:02,247 Relaxation took 76.0s
2024-12-06 17:30:02,247 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.6 pTM=0.608 ipTM=0.137
2024-12-06 17:32:02,208 Relaxation took 120.0s
2024-12-06 17:32:02,208 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.2 pTM=0.619 ipTM=0.12
2024-12-06 17:32:04,095 Done