2024-12-06 16:43:55,011 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 16:43:55,328 Running on GPU
2024-12-06 16:43:59,256 Found 6 citations for tools or databases
2024-12-06 16:43:59,256 Query 1/1: KBTBD7_TNIK (length 2044)
2024-12-06 16:43:59,597 Sleeping for 8s. Reason: PENDING
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2024-12-06 16:48:42,444 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:48:54,988 Sleeping for 9s. Reason: PENDING
2024-12-06 16:49:04,250 Sleeping for 10s. Reason: RUNNING
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2024-12-06 16:50:32,212 Sleeping for 8s. Reason: RUNNING
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2024-12-06 16:50:51,989 Sleeping for 7s. Reason: RUNNING
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2024-12-06 16:51:59,559 Sleeping for 7s. Reason: RUNNING
2024-12-06 16:52:06,823 Sleeping for 6s. Reason: RUNNING
2024-12-06 16:52:13,081 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:52:23,340 Sleeping for 8s. Reason: RUNNING
2024-12-06 16:52:31,601 Sleeping for 8s. Reason: RUNNING
2024-12-06 16:52:39,858 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:52:50,117 Sleeping for 6s. Reason: RUNNING
2024-12-06 16:52:56,376 Sleeping for 6s. Reason: RUNNING
2024-12-06 16:53:02,627 Sleeping for 9s. Reason: RUNNING
2024-12-06 16:53:11,885 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:53:31,439 Setting max_seq=508, max_extra_seq=2048
2024-12-06 16:58:38,595 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.3 pTM=0.385 ipTM=0.253
2024-12-06 17:01:26,261 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.6 pTM=0.389 ipTM=0.23 tol=19.1
2024-12-06 17:04:13,877 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.7 pTM=0.378 ipTM=0.25 tol=17.4
2024-12-06 17:07:01,426 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.5 pTM=0.376 ipTM=0.274 tol=15.6
2024-12-06 17:09:48,933 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.5 pTM=0.384 ipTM=0.285 tol=9.62
2024-12-06 17:12:36,473 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56 pTM=0.377 ipTM=0.279 tol=7.81
2024-12-06 17:15:24,088 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.8 pTM=0.37 ipTM=0.28 tol=5.59
2024-12-06 17:18:11,755 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.9 pTM=0.369 ipTM=0.288 tol=7.61
2024-12-06 17:20:59,344 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.6 pTM=0.372 ipTM=0.284 tol=5.95
2024-12-06 17:23:46,924 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.1 pTM=0.373 ipTM=0.291 tol=5.79
2024-12-06 17:26:34,496 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.4 pTM=0.376 ipTM=0.284 tol=7.45
2024-12-06 17:29:22,079 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.2 pTM=0.375 ipTM=0.284 tol=8.47
2024-12-06 17:32:09,669 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.5 pTM=0.376 ipTM=0.289 tol=5.01
2024-12-06 17:34:57,245 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.2 pTM=0.374 ipTM=0.29 tol=3.81
2024-12-06 17:37:44,827 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.3 pTM=0.373 ipTM=0.289 tol=4.29
2024-12-06 17:40:32,439 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.2 pTM=0.371 ipTM=0.294 tol=4.76
2024-12-06 17:43:20,055 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.6 pTM=0.376 ipTM=0.293 tol=4.65
2024-12-06 17:46:07,678 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.7 pTM=0.378 ipTM=0.295 tol=9.14
2024-12-06 17:48:55,258 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.7 pTM=0.376 ipTM=0.293 tol=8.34
2024-12-06 17:51:42,860 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.8 pTM=0.379 ipTM=0.293 tol=4.45
2024-12-06 17:54:30,434 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.6 pTM=0.378 ipTM=0.29 tol=3.55
2024-12-06 17:57:18,057 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.5 pTM=0.378 ipTM=0.292 tol=4.68
2024-12-06 18:00:05,628 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.7 pTM=0.377 ipTM=0.288 tol=4.8
2024-12-06 18:02:53,203 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.5 pTM=0.379 ipTM=0.291 tol=4.79
2024-12-06 18:05:40,780 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.8 pTM=0.381 ipTM=0.29 tol=4.56
2024-12-06 18:08:28,319 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.7 pTM=0.383 ipTM=0.29 tol=3.78
2024-12-06 18:11:15,884 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.8 pTM=0.379 ipTM=0.289 tol=4.57
2024-12-06 18:14:03,423 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.7 pTM=0.38 ipTM=0.292 tol=3.83
2024-12-06 18:16:50,946 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.7 pTM=0.375 ipTM=0.294 tol=3.44
2024-12-06 18:19:38,502 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.2 pTM=0.372 ipTM=0.291 tol=14.5
2024-12-06 18:22:25,954 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.4 pTM=0.371 ipTM=0.292 tol=9.22
2024-12-06 18:22:25,957 alphafold2_multimer_v3_model_1_seed_000 took 5329.5s (30 recycles)
2024-12-06 18:25:15,765 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.5 pTM=0.394 ipTM=0.282
2024-12-06 18:28:03,358 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.6 pTM=0.406 ipTM=0.233 tol=16.6
2024-12-06 18:30:50,962 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.3 pTM=0.394 ipTM=0.245 tol=13.3
2024-12-06 18:33:38,573 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.7 pTM=0.394 ipTM=0.273 tol=6.84
2024-12-06 18:36:26,259 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.7 pTM=0.39 ipTM=0.268 tol=6.86
2024-12-06 18:39:13,933 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.7 pTM=0.387 ipTM=0.275 tol=14.9
2024-12-06 18:42:01,603 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.2 pTM=0.382 ipTM=0.26 tol=13.9
2024-12-06 18:44:49,344 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.4 pTM=0.381 ipTM=0.25 tol=9.34
2024-12-06 18:47:37,064 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.5 pTM=0.382 ipTM=0.237 tol=12.4
2024-12-06 18:50:24,859 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.8 pTM=0.385 ipTM=0.241 tol=12.5
2024-12-06 18:53:12,566 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.8 pTM=0.388 ipTM=0.256 tol=6.89
2024-12-06 18:56:00,226 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.8 pTM=0.387 ipTM=0.251 tol=6.06
2024-12-06 18:58:47,902 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.8 pTM=0.388 ipTM=0.265 tol=17
2024-12-06 19:01:35,421 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57 pTM=0.386 ipTM=0.265 tol=10.4
2024-12-06 19:04:23,009 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.7 pTM=0.382 ipTM=0.275 tol=8.1
2024-12-06 19:07:10,649 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.8 pTM=0.38 ipTM=0.271 tol=8.23
2024-12-06 19:09:58,254 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.7 pTM=0.382 ipTM=0.279 tol=10.2
2024-12-06 19:12:45,970 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.8 pTM=0.384 ipTM=0.274 tol=10.8
2024-12-06 19:15:33,706 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.6 pTM=0.382 ipTM=0.261 tol=4.62
2024-12-06 19:18:21,468 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.6 pTM=0.383 ipTM=0.259 tol=8.12
2024-12-06 19:21:09,215 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.5 pTM=0.382 ipTM=0.26 tol=6.31
2024-12-06 19:23:56,967 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.7 pTM=0.381 ipTM=0.258 tol=7.84
2024-12-06 19:26:44,767 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.7 pTM=0.383 ipTM=0.262 tol=7.59
2024-12-06 19:29:32,525 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.8 pTM=0.384 ipTM=0.26 tol=10.1
2024-12-06 19:32:20,307 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.9 pTM=0.387 ipTM=0.265 tol=15.7
2024-12-06 19:35:07,962 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.7 pTM=0.383 ipTM=0.256 tol=10
2024-12-06 19:37:55,674 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.9 pTM=0.382 ipTM=0.26 tol=7.62
2024-12-06 19:40:43,450 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.7 pTM=0.381 ipTM=0.266 tol=7.02
2024-12-06 19:43:31,362 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.4 pTM=0.383 ipTM=0.265 tol=11.3
2024-12-06 19:46:19,279 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.7 pTM=0.381 ipTM=0.259 tol=8.88
2024-12-06 19:49:07,205 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.1 pTM=0.381 ipTM=0.266 tol=10.7
2024-12-06 19:49:07,207 alphafold2_multimer_v3_model_2_seed_000 took 5198.8s (30 recycles)
2024-12-06 19:51:57,521 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.9 pTM=0.397 ipTM=0.258
2024-12-06 19:54:45,450 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.9 pTM=0.399 ipTM=0.217 tol=21.1
2024-12-06 19:57:33,370 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.5 pTM=0.399 ipTM=0.235 tol=25.3
2024-12-06 20:00:21,225 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.1 pTM=0.395 ipTM=0.244 tol=19.9
2024-12-06 20:03:08,983 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.6 pTM=0.397 ipTM=0.259 tol=16
2024-12-06 20:05:56,861 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.2 pTM=0.396 ipTM=0.264 tol=21.9
2024-12-06 20:08:44,816 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55.9 pTM=0.395 ipTM=0.25 tol=14.2
2024-12-06 20:11:32,635 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55.9 pTM=0.396 ipTM=0.252 tol=12.7
2024-12-06 20:14:20,487 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.2 pTM=0.396 ipTM=0.258 tol=15.2
2024-12-06 20:17:08,467 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.8 pTM=0.395 ipTM=0.248 tol=10.5
2024-12-06 20:19:56,386 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.6 pTM=0.396 ipTM=0.259 tol=10.7
2024-12-06 20:22:44,321 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.8 pTM=0.399 ipTM=0.252 tol=13.1
2024-12-06 20:25:32,382 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.1 pTM=0.396 ipTM=0.254 tol=17.7
2024-12-06 20:28:20,296 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56 pTM=0.396 ipTM=0.26 tol=22.6
2024-12-06 20:31:08,130 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.1 pTM=0.395 ipTM=0.26 tol=20.9
2024-12-06 20:33:55,902 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.4 pTM=0.398 ipTM=0.259 tol=10.3
2024-12-06 20:36:43,784 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.4 pTM=0.394 ipTM=0.259 tol=14.4
2024-12-06 20:39:31,587 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56.9 pTM=0.4 ipTM=0.25 tol=13.1
2024-12-06 20:42:19,426 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57 pTM=0.396 ipTM=0.265 tol=18.2
2024-12-06 20:45:07,276 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.1 pTM=0.398 ipTM=0.271 tol=24.5
2024-12-06 20:47:55,213 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56 pTM=0.393 ipTM=0.272 tol=13.5
2024-12-06 20:50:43,065 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56 pTM=0.393 ipTM=0.266 tol=15
2024-12-06 20:53:31,006 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.7 pTM=0.397 ipTM=0.268 tol=16.4
2024-12-06 20:56:18,927 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.1 pTM=0.397 ipTM=0.258 tol=19
2024-12-06 20:59:06,764 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.3 pTM=0.4 ipTM=0.266 tol=14.4
2024-12-06 21:01:54,615 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.6 pTM=0.398 ipTM=0.26 tol=21.9
2024-12-06 21:04:42,554 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.4 pTM=0.399 ipTM=0.255 tol=17.5
2024-12-06 21:07:30,497 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55.8 pTM=0.399 ipTM=0.264 tol=27.2
2024-12-06 21:10:18,370 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.5 pTM=0.401 ipTM=0.27 tol=28
2024-12-06 21:13:06,229 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.8 pTM=0.397 ipTM=0.252 tol=24.8
2024-12-06 21:15:53,932 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=55.6 pTM=0.396 ipTM=0.246 tol=20.3
2024-12-06 21:15:53,934 alphafold2_multimer_v3_model_3_seed_000 took 5204.3s (30 recycles)
2024-12-06 21:18:44,155 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51 pTM=0.398 ipTM=0.275
2024-12-06 21:21:31,917 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.8 pTM=0.393 ipTM=0.213 tol=22
2024-12-06 21:24:19,788 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.4 pTM=0.393 ipTM=0.202 tol=27
2024-12-06 21:27:07,397 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=54.1 pTM=0.407 ipTM=0.252 tol=16
2024-12-06 21:29:55,175 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.3 pTM=0.395 ipTM=0.225 tol=16.5
2024-12-06 21:32:42,881 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.2 pTM=0.397 ipTM=0.271 tol=15.2
2024-12-06 21:35:30,651 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.3 pTM=0.394 ipTM=0.274 tol=17
2024-12-06 21:38:18,644 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55.3 pTM=0.399 ipTM=0.29 tol=17
2024-12-06 21:41:06,657 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.4 pTM=0.395 ipTM=0.279 tol=11.8
2024-12-06 21:43:54,727 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.5 pTM=0.397 ipTM=0.28 tol=14.8
2024-12-06 21:46:42,693 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.1 pTM=0.397 ipTM=0.279 tol=13.9
2024-12-06 21:49:30,681 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.2 pTM=0.398 ipTM=0.283 tol=12.4
2024-12-06 21:52:18,736 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.9 pTM=0.398 ipTM=0.286 tol=9.09
2024-12-06 21:55:06,631 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.2 pTM=0.398 ipTM=0.29 tol=16.4
2024-12-06 21:57:54,555 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.6 pTM=0.396 ipTM=0.284 tol=17.9
2024-12-06 22:00:42,417 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55 pTM=0.398 ipTM=0.291 tol=14.2
2024-12-06 22:03:30,234 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.5 pTM=0.394 ipTM=0.28 tol=12.5
2024-12-06 22:06:18,012 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55.2 pTM=0.397 ipTM=0.292 tol=11
2024-12-06 22:09:05,818 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.5 pTM=0.395 ipTM=0.284 tol=13.1
2024-12-06 22:11:53,598 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.3 pTM=0.398 ipTM=0.292 tol=12.9
2024-12-06 22:14:41,435 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.4 pTM=0.393 ipTM=0.285 tol=12.6
2024-12-06 22:17:29,224 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55.6 pTM=0.397 ipTM=0.292 tol=9.85
2024-12-06 22:20:16,962 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.6 pTM=0.394 ipTM=0.288 tol=13.6
2024-12-06 22:23:04,599 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.4 pTM=0.399 ipTM=0.291 tol=12.5
2024-12-06 22:25:52,363 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.7 pTM=0.396 ipTM=0.288 tol=13.1
2024-12-06 22:28:40,144 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.6 pTM=0.398 ipTM=0.285 tol=14.2
2024-12-06 22:31:27,930 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.8 pTM=0.395 ipTM=0.281 tol=13.2
2024-12-06 22:34:15,745 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.4 pTM=0.396 ipTM=0.288 tol=11.1
2024-12-06 22:37:03,605 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.7 pTM=0.395 ipTM=0.286 tol=11.5
2024-12-06 22:39:51,461 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.4 pTM=0.395 ipTM=0.285 tol=11.3
2024-12-06 22:42:39,380 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.8 pTM=0.394 ipTM=0.281 tol=11.5
2024-12-06 22:42:39,383 alphafold2_multimer_v3_model_4_seed_000 took 5203.0s (30 recycles)
2024-12-06 22:45:29,572 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51.7 pTM=0.4 ipTM=0.284
2024-12-06 22:48:17,381 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.8 pTM=0.399 ipTM=0.253 tol=22.6
2024-12-06 22:51:05,339 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.8 pTM=0.391 ipTM=0.214 tol=18.5
2024-12-06 22:53:53,170 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.3 pTM=0.396 ipTM=0.272 tol=15.5
2024-12-06 22:56:41,014 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.8 pTM=0.396 ipTM=0.274 tol=13.3
2024-12-06 22:59:28,807 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.3 pTM=0.398 ipTM=0.293 tol=11.5
2024-12-06 23:02:16,566 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.1 pTM=0.398 ipTM=0.286 tol=11.4
2024-12-06 23:05:04,372 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.3 pTM=0.4 ipTM=0.288 tol=10.7
2024-12-06 23:07:52,028 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.6 pTM=0.402 ipTM=0.3 tol=6.85
2024-12-06 23:10:39,703 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.3 pTM=0.401 ipTM=0.296 tol=6.5
2024-12-06 23:13:27,419 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.1 pTM=0.401 ipTM=0.29 tol=11.3
2024-12-06 23:16:15,186 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.3 pTM=0.402 ipTM=0.289 tol=7.81
2024-12-06 23:19:02,998 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56 pTM=0.399 ipTM=0.286 tol=6.49
2024-12-06 23:21:50,818 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.3 pTM=0.4 ipTM=0.283 tol=7.86
2024-12-06 23:24:38,562 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.8 pTM=0.401 ipTM=0.288 tol=8.43
2024-12-06 23:27:26,358 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.8 pTM=0.4 ipTM=0.295 tol=6.78
2024-12-06 23:30:14,121 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.3 pTM=0.4 ipTM=0.293 tol=8.95
2024-12-06 23:33:01,926 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.1 pTM=0.401 ipTM=0.297 tol=9.88
2024-12-06 23:35:49,778 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56 pTM=0.399 ipTM=0.291 tol=13.2
2024-12-06 23:38:37,622 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56 pTM=0.402 ipTM=0.29 tol=12.4
2024-12-06 23:41:25,388 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.1 pTM=0.402 ipTM=0.285 tol=12.7
2024-12-06 23:44:13,146 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.5 pTM=0.401 ipTM=0.289 tol=7.88
2024-12-06 23:47:00,961 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.4 pTM=0.398 ipTM=0.283 tol=9.88
2024-12-06 23:49:48,811 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.2 pTM=0.399 ipTM=0.282 tol=8.29
2024-12-06 23:52:36,562 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.3 pTM=0.401 ipTM=0.279 tol=9.32
2024-12-06 23:55:24,321 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.5 pTM=0.399 ipTM=0.276 tol=6.41
2024-12-06 23:58:12,118 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.3 pTM=0.398 ipTM=0.269 tol=9.03
2024-12-07 00:00:59,858 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.1 pTM=0.397 ipTM=0.271 tol=8.13
2024-12-07 00:03:47,491 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55.9 pTM=0.399 ipTM=0.274 tol=7.82
2024-12-07 00:06:35,230 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.9 pTM=0.398 ipTM=0.271 tol=12.1
2024-12-07 00:09:23,000 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56.1 pTM=0.398 ipTM=0.268 tol=10.4
2024-12-07 00:09:23,003 alphafold2_multimer_v3_model_5_seed_000 took 5201.2s (30 recycles)
2024-12-07 00:09:25,425 reranking models by 'multimer' metric
2024-12-07 00:09:29,662 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 00:15:34,772 Relaxation took 369.3s
2024-12-07 00:15:34,773 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.4 pTM=0.371 ipTM=0.292
2024-12-07 00:22:39,221 Relaxation took 424.4s
2024-12-07 00:22:39,221 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.8 pTM=0.394 ipTM=0.281
2024-12-07 00:32:21,881 Relaxation took 582.7s
2024-12-07 00:32:21,911 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56.1 pTM=0.398 ipTM=0.268
2024-12-07 00:53:27,092 Relaxation took 1265.2s
2024-12-07 00:53:27,093 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.1 pTM=0.381 ipTM=0.266
2024-12-07 01:03:07,151 Relaxation took 580.1s
2024-12-07 01:03:07,152 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=55.6 pTM=0.396 ipTM=0.246
2024-12-07 01:03:12,465 Done