2024-12-06 16:49:57,805 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 16:49:58,135 Running on GPU
2024-12-06 16:50:02,707 Found 6 citations for tools or databases
2024-12-06 16:50:02,707 Query 1/1: KBTBD7_ZNF574 (length 1580)
2024-12-06 16:50:03,049 Sleeping for 5s. Reason: PENDING
2024-12-06 16:50:08,307 Sleeping for 5s. Reason: RUNNING
2024-12-06 16:50:13,566 Sleeping for 10s. Reason: RUNNING
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2024-12-06 16:53:16,653 Sleeping for 5s. Reason: RUNNING
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2024-12-06 16:53:32,167 Sleeping for 7s. Reason: RUNNING
2024-12-06 16:53:39,429 Sleeping for 5s. Reason: RUNNING
2024-12-06 16:53:44,834 Sleeping for 8s. Reason: RUNNING
2024-12-06 16:53:54,736 Sleeping for 8s. Reason: PENDING
2024-12-06 16:54:02,999 Sleeping for 7s. Reason: RUNNING
2024-12-06 16:54:10,260 Sleeping for 9s. Reason: RUNNING
2024-12-06 16:54:19,522 Sleeping for 8s. Reason: RUNNING
2024-12-06 16:54:27,783 Sleeping for 9s. Reason: RUNNING
2024-12-06 16:54:37,038 Sleeping for 7s. Reason: RUNNING
2024-12-06 16:54:44,298 Sleeping for 9s. Reason: RUNNING
2024-12-06 16:54:53,556 Sleeping for 9s. Reason: RUNNING
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2024-12-06 16:55:11,219 Sleeping for 7s. Reason: RUNNING
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2024-12-06 16:55:32,988 Sleeping for 7s. Reason: RUNNING
2024-12-06 16:55:40,250 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:55:50,514 Sleeping for 10s. Reason: RUNNING
2024-12-06 16:56:00,772 Sleeping for 5s. Reason: RUNNING
2024-12-06 16:56:06,029 Sleeping for 5s. Reason: RUNNING
2024-12-06 16:56:11,281 Sleeping for 7s. Reason: RUNNING
2024-12-06 16:56:18,539 Sleeping for 8s. Reason: RUNNING
2024-12-06 16:56:26,806 Sleeping for 6s. Reason: RUNNING
2024-12-06 16:56:33,064 Sleeping for 7s. Reason: RUNNING
2024-12-06 16:56:40,323 Sleeping for 8s. Reason: RUNNING
2024-12-06 16:56:53,373 Setting max_seq=508, max_extra_seq=2048
2024-12-06 17:00:21,741 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.6 pTM=0.427 ipTM=0.223
2024-12-06 17:01:37,692 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.2 pTM=0.433 ipTM=0.209 tol=12.9
2024-12-06 17:02:53,739 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56 pTM=0.438 ipTM=0.205 tol=9.18
2024-12-06 17:04:09,762 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.2 pTM=0.437 ipTM=0.211 tol=6.68
2024-12-06 17:05:25,774 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.8 pTM=0.436 ipTM=0.214 tol=4.29
2024-12-06 17:06:41,824 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.1 pTM=0.439 ipTM=0.219 tol=4.12
2024-12-06 17:07:57,868 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56 pTM=0.437 ipTM=0.219 tol=3.33
2024-12-06 17:09:13,953 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.4 pTM=0.44 ipTM=0.224 tol=2.46
2024-12-06 17:10:30,016 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.3 pTM=0.437 ipTM=0.219 tol=4.09
2024-12-06 17:11:46,091 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.7 pTM=0.442 ipTM=0.228 tol=2.6
2024-12-06 17:13:02,165 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.6 pTM=0.441 ipTM=0.229 tol=4.21
2024-12-06 17:14:18,238 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.3 pTM=0.441 ipTM=0.234 tol=2.81
2024-12-06 17:15:34,284 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.5 pTM=0.442 ipTM=0.231 tol=2.25
2024-12-06 17:16:50,377 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.4 pTM=0.441 ipTM=0.234 tol=4.59
2024-12-06 17:18:06,451 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.3 pTM=0.438 ipTM=0.237 tol=4.8
2024-12-06 17:19:22,556 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.3 pTM=0.439 ipTM=0.238 tol=5.58
2024-12-06 17:20:38,605 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.4 pTM=0.439 ipTM=0.246 tol=4.88
2024-12-06 17:21:54,685 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.5 pTM=0.44 ipTM=0.245 tol=5.18
2024-12-06 17:23:10,750 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.4 pTM=0.435 ipTM=0.243 tol=3.15
2024-12-06 17:24:26,807 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.5 pTM=0.434 ipTM=0.244 tol=2.57
2024-12-06 17:25:42,882 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.2 pTM=0.429 ipTM=0.241 tol=4.45
2024-12-06 17:26:58,955 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.4 pTM=0.428 ipTM=0.237 tol=5.67
2024-12-06 17:28:15,041 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.4 pTM=0.432 ipTM=0.234 tol=3.86
2024-12-06 17:29:31,106 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.3 pTM=0.43 ipTM=0.231 tol=3.57
2024-12-06 17:30:47,178 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.2 pTM=0.431 ipTM=0.236 tol=3.7
2024-12-06 17:32:03,246 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.4 pTM=0.433 ipTM=0.238 tol=1.93
2024-12-06 17:33:19,309 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.4 pTM=0.427 ipTM=0.228 tol=2.99
2024-12-06 17:34:35,388 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.3 pTM=0.429 ipTM=0.226 tol=2.7
2024-12-06 17:35:51,464 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56 pTM=0.428 ipTM=0.228 tol=2.39
2024-12-06 17:37:07,514 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.2 pTM=0.431 ipTM=0.227 tol=2.03
2024-12-06 17:38:23,592 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.3 pTM=0.43 ipTM=0.235 tol=1.99
2024-12-06 17:38:23,594 alphafold2_multimer_v3_model_1_seed_000 took 2484.7s (30 recycles)
2024-12-06 17:39:41,288 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.9 pTM=0.451 ipTM=0.63
2024-12-06 17:40:57,539 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.9 pTM=0.461 ipTM=0.397 tol=11.1
2024-12-06 17:42:13,798 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.5 pTM=0.461 ipTM=0.251 tol=6.73
2024-12-06 17:43:30,108 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=56.8 pTM=0.457 ipTM=0.359 tol=4.61
2024-12-06 17:44:46,447 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.8 pTM=0.455 ipTM=0.249 tol=2.96
2024-12-06 17:46:02,782 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.7 pTM=0.453 ipTM=0.234 tol=3.35
2024-12-06 17:47:19,112 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.2 pTM=0.452 ipTM=0.285 tol=7.72
2024-12-06 17:48:35,451 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.5 pTM=0.452 ipTM=0.243 tol=3.78
2024-12-06 17:49:51,743 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.2 pTM=0.449 ipTM=0.204 tol=2.83
2024-12-06 17:51:07,945 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.6 pTM=0.453 ipTM=0.251 tol=2.21
2024-12-06 17:52:24,141 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.5 pTM=0.454 ipTM=0.269 tol=2.12
2024-12-06 17:53:40,338 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.4 pTM=0.452 ipTM=0.276 tol=1.81
2024-12-06 17:54:56,547 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.4 pTM=0.454 ipTM=0.282 tol=2.24
2024-12-06 17:56:12,798 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.3 pTM=0.451 ipTM=0.252 tol=2.11
2024-12-06 17:57:29,042 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.2 pTM=0.45 ipTM=0.258 tol=1.29
2024-12-06 17:58:45,261 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.3 pTM=0.449 ipTM=0.251 tol=1.5
2024-12-06 18:00:01,448 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.4 pTM=0.453 ipTM=0.264 tol=1.25
2024-12-06 18:01:17,634 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.5 pTM=0.452 ipTM=0.255 tol=1.49
2024-12-06 18:02:33,930 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.3 pTM=0.451 ipTM=0.235 tol=1.15
2024-12-06 18:03:50,271 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.4 pTM=0.45 ipTM=0.241 tol=1.27
2024-12-06 18:05:06,580 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57 pTM=0.448 ipTM=0.23 tol=1.39
2024-12-06 18:06:22,874 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.4 pTM=0.446 ipTM=0.22 tol=1.28
2024-12-06 18:07:39,197 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.3 pTM=0.447 ipTM=0.238 tol=1.36
2024-12-06 18:08:55,521 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.4 pTM=0.45 ipTM=0.25 tol=1.85
2024-12-06 18:10:11,867 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57 pTM=0.448 ipTM=0.229 tol=2.62
2024-12-06 18:11:28,248 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.3 pTM=0.449 ipTM=0.205 tol=1.84
2024-12-06 18:12:44,540 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.2 pTM=0.447 ipTM=0.207 tol=1.41
2024-12-06 18:14:00,891 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.3 pTM=0.447 ipTM=0.205 tol=2.64
2024-12-06 18:15:17,267 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.1 pTM=0.445 ipTM=0.207 tol=3.06
2024-12-06 18:16:33,673 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.1 pTM=0.446 ipTM=0.209 tol=3.78
2024-12-06 18:17:50,054 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.1 pTM=0.445 ipTM=0.208 tol=2.64
2024-12-06 18:17:50,055 alphafold2_multimer_v3_model_2_seed_000 took 2365.0s (30 recycles)
2024-12-06 18:19:08,079 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.8 pTM=0.436 ipTM=0.194
2024-12-06 18:20:24,605 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.8 pTM=0.452 ipTM=0.198 tol=13.6
2024-12-06 18:21:41,159 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.5 pTM=0.46 ipTM=0.236 tol=15.3
2024-12-06 18:22:57,757 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.2 pTM=0.456 ipTM=0.203 tol=8.39
2024-12-06 18:24:14,362 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.9 pTM=0.454 ipTM=0.213 tol=5.49
2024-12-06 18:25:31,032 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55 pTM=0.451 ipTM=0.218 tol=7.88
2024-12-06 18:26:47,644 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.8 pTM=0.451 ipTM=0.207 tol=8.2
2024-12-06 18:28:04,212 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.5 pTM=0.457 ipTM=0.332 tol=16.3
2024-12-06 18:29:20,799 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.7 pTM=0.453 ipTM=0.195 tol=6.75
2024-12-06 18:30:37,356 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.8 pTM=0.451 ipTM=0.224 tol=8.07
2024-12-06 18:31:53,909 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=55.1 pTM=0.45 ipTM=0.195 tol=10.3
2024-12-06 18:33:10,457 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.1 pTM=0.454 ipTM=0.224 tol=7.7
2024-12-06 18:34:27,012 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55.1 pTM=0.452 ipTM=0.193 tol=5.35
2024-12-06 18:35:43,559 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55 pTM=0.452 ipTM=0.231 tol=5.04
2024-12-06 18:37:00,151 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.8 pTM=0.451 ipTM=0.2 tol=4.14
2024-12-06 18:38:16,764 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55 pTM=0.453 ipTM=0.209 tol=3.52
2024-12-06 18:39:33,385 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=55 pTM=0.452 ipTM=0.199 tol=2.81
2024-12-06 18:40:50,024 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.1 pTM=0.452 ipTM=0.235 tol=2.71
2024-12-06 18:42:06,656 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=55 pTM=0.449 ipTM=0.192 tol=3.73
2024-12-06 18:43:23,300 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55 pTM=0.452 ipTM=0.234 tol=4.66
2024-12-06 18:44:39,976 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55 pTM=0.448 ipTM=0.183 tol=10.5
2024-12-06 18:45:56,601 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.6 pTM=0.449 ipTM=0.222 tol=6.27
2024-12-06 18:47:13,242 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55.3 pTM=0.447 ipTM=0.182 tol=4.88
2024-12-06 18:48:29,842 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.8 pTM=0.452 ipTM=0.228 tol=5.28
2024-12-06 18:49:46,451 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=55 pTM=0.448 ipTM=0.184 tol=9.02
2024-12-06 18:51:03,038 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.8 pTM=0.451 ipTM=0.213 tol=7.18
2024-12-06 18:52:19,573 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.8 pTM=0.45 ipTM=0.213 tol=12.3
2024-12-06 18:53:36,137 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.7 pTM=0.45 ipTM=0.206 tol=11.1
2024-12-06 18:54:52,678 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.4 pTM=0.448 ipTM=0.186 tol=5.18
2024-12-06 18:56:09,221 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.8 pTM=0.449 ipTM=0.219 tol=4.17
2024-12-06 18:57:25,834 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=55.1 pTM=0.447 ipTM=0.188 tol=11.5
2024-12-06 18:57:25,836 alphafold2_multimer_v3_model_3_seed_000 took 2374.3s (30 recycles)
2024-12-06 18:58:43,809 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.8 pTM=0.436 ipTM=0.247
2024-12-06 19:00:00,339 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.9 pTM=0.439 ipTM=0.271 tol=20.2
2024-12-06 19:01:16,795 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.7 pTM=0.448 ipTM=0.224 tol=8.92
2024-12-06 19:02:33,268 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.8 pTM=0.45 ipTM=0.277 tol=11.4
2024-12-06 19:03:49,692 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.9 pTM=0.449 ipTM=0.289 tol=6.86
2024-12-06 19:05:06,160 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.8 pTM=0.449 ipTM=0.292 tol=5.51
2024-12-06 19:06:22,602 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=54.1 pTM=0.457 ipTM=0.379 tol=5.94
2024-12-06 19:07:39,094 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.8 pTM=0.456 ipTM=0.416 tol=8.27
2024-12-06 19:08:55,579 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.4 pTM=0.448 ipTM=0.344 tol=5.12
2024-12-06 19:10:12,102 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=54.7 pTM=0.453 ipTM=0.406 tol=4.21
2024-12-06 19:11:28,588 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=54.7 pTM=0.455 ipTM=0.501 tol=4.46
2024-12-06 19:12:45,045 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.5 pTM=0.46 ipTM=0.457 tol=6.37
2024-12-06 19:14:01,607 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.7 pTM=0.454 ipTM=0.41 tol=5.27
2024-12-06 19:15:18,068 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.7 pTM=0.45 ipTM=0.377 tol=4.08
2024-12-06 19:16:34,509 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.4 pTM=0.454 ipTM=0.417 tol=3.81
2024-12-06 19:17:50,978 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54.6 pTM=0.454 ipTM=0.438 tol=2.61
2024-12-06 19:19:07,460 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.3 pTM=0.455 ipTM=0.389 tol=3.21
2024-12-06 19:20:23,915 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=54.4 pTM=0.454 ipTM=0.397 tol=4.34
2024-12-06 19:21:40,372 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54.6 pTM=0.459 ipTM=0.454 tol=3.64
2024-12-06 19:22:56,824 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54.6 pTM=0.458 ipTM=0.457 tol=3.2
2024-12-06 19:24:13,259 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=54.2 pTM=0.457 ipTM=0.406 tol=2.52
2024-12-06 19:25:29,676 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=54.4 pTM=0.451 ipTM=0.34 tol=3.02
2024-12-06 19:26:46,073 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.4 pTM=0.452 ipTM=0.342 tol=3.98
2024-12-06 19:28:02,407 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54.4 pTM=0.461 ipTM=0.529 tol=6.1
2024-12-06 19:29:18,726 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=54.2 pTM=0.459 ipTM=0.459 tol=4.27
2024-12-06 19:30:35,084 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=54.5 pTM=0.456 ipTM=0.352 tol=3.22
2024-12-06 19:31:51,505 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=54.5 pTM=0.452 ipTM=0.378 tol=3.13
2024-12-06 19:33:07,876 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=54.4 pTM=0.46 ipTM=0.417 tol=8.05
2024-12-06 19:34:24,210 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.3 pTM=0.459 ipTM=0.44 tol=6.23
2024-12-06 19:35:40,521 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=54.8 pTM=0.461 ipTM=0.437 tol=8.1
2024-12-06 19:36:56,865 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.9 pTM=0.464 ipTM=0.404 tol=4.03
2024-12-06 19:36:56,867 alphafold2_multimer_v3_model_4_seed_000 took 2369.5s (30 recycles)
2024-12-06 19:38:14,850 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.2 pTM=0.44 ipTM=0.57
2024-12-06 19:39:31,355 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.8 pTM=0.451 ipTM=0.426 tol=12.9
2024-12-06 19:40:47,844 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.3 pTM=0.461 ipTM=0.254 tol=10.3
2024-12-06 19:42:04,354 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.4 pTM=0.452 ipTM=0.199 tol=6.57
2024-12-06 19:43:20,825 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.8 pTM=0.454 ipTM=0.222 tol=10.4
2024-12-06 19:44:37,326 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55 pTM=0.458 ipTM=0.309 tol=6.13
2024-12-06 19:45:53,843 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55 pTM=0.456 ipTM=0.252 tol=4.42
2024-12-06 19:47:10,326 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55 pTM=0.455 ipTM=0.26 tol=6.55
2024-12-06 19:48:26,823 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55 pTM=0.455 ipTM=0.269 tol=4.23
2024-12-06 19:49:43,292 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55 pTM=0.454 ipTM=0.26 tol=3.21
2024-12-06 19:50:59,736 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55 pTM=0.456 ipTM=0.306 tol=3.04
2024-12-06 19:52:16,196 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55 pTM=0.453 ipTM=0.234 tol=2.87
2024-12-06 19:53:32,698 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.1 pTM=0.453 ipTM=0.262 tol=3.38
2024-12-06 19:54:49,184 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.9 pTM=0.453 ipTM=0.237 tol=3.27
2024-12-06 19:56:05,681 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.9 pTM=0.453 ipTM=0.231 tol=3.04
2024-12-06 19:57:22,138 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55 pTM=0.455 ipTM=0.294 tol=1.86
2024-12-06 19:58:38,616 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54.9 pTM=0.455 ipTM=0.247 tol=1.83
2024-12-06 19:59:55,088 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.2 pTM=0.453 ipTM=0.236 tol=1.94
2024-12-06 20:01:11,542 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55.1 pTM=0.455 ipTM=0.321 tol=2.68
2024-12-06 20:02:28,032 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55 pTM=0.453 ipTM=0.226 tol=2.44
2024-12-06 20:03:44,522 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.7 pTM=0.45 ipTM=0.21 tol=4.12
2024-12-06 20:05:01,005 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.2 pTM=0.453 ipTM=0.257 tol=3.28
2024-12-06 20:06:17,476 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.1 pTM=0.451 ipTM=0.221 tol=2.8
2024-12-06 20:07:33,951 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55 pTM=0.45 ipTM=0.205 tol=2.92
2024-12-06 20:08:50,385 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55 pTM=0.451 ipTM=0.216 tol=2.62
2024-12-06 20:10:06,801 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55.2 pTM=0.454 ipTM=0.241 tol=4.35
2024-12-06 20:11:23,209 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55 pTM=0.45 ipTM=0.245 tol=7.29
2024-12-06 20:12:39,657 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55 pTM=0.452 ipTM=0.267 tol=2.25
2024-12-06 20:13:56,150 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55.1 pTM=0.45 ipTM=0.233 tol=2.27
2024-12-06 20:15:12,613 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.1 pTM=0.45 ipTM=0.228 tol=2.97
2024-12-06 20:16:28,999 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55 pTM=0.452 ipTM=0.229 tol=2.44
2024-12-06 20:16:29,001 alphafold2_multimer_v3_model_5_seed_000 took 2370.6s (30 recycles)
2024-12-06 20:16:30,489 reranking models by 'multimer' metric
2024-12-06 20:16:34,368 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 20:20:27,330 Relaxation took 236.8s
2024-12-06 20:20:27,330 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.9 pTM=0.464 ipTM=0.404
2024-12-06 20:24:13,721 Relaxation took 226.4s
2024-12-06 20:24:13,722 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.3 pTM=0.43 ipTM=0.235
2024-12-06 20:28:23,114 Relaxation took 249.4s
2024-12-06 20:28:23,114 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55 pTM=0.452 ipTM=0.229
2024-12-06 20:33:04,633 Relaxation took 281.5s
2024-12-06 20:33:04,634 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.1 pTM=0.445 ipTM=0.208
2024-12-06 20:37:34,824 Relaxation took 270.2s
2024-12-06 20:37:34,825 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=55.1 pTM=0.447 ipTM=0.188
2024-12-06 20:37:38,408 Done