2024-12-06 17:23:25,038 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 17:23:25,346 Running on GPU
2024-12-06 17:23:28,789 Found 6 citations for tools or databases
2024-12-06 17:23:28,789 Query 1/1: KCMF1_C15orf27 (length 912)
2024-12-06 17:23:29,087 Sleeping for 6s. Reason: PENDING
2024-12-06 17:23:35,339 Sleeping for 6s. Reason: RUNNING
2024-12-06 17:23:41,595 Sleeping for 7s. Reason: RUNNING
2024-12-06 17:23:48,856 Sleeping for 6s. Reason: RUNNING
2024-12-06 17:23:55,116 Sleeping for 7s. Reason: RUNNING
2024-12-06 17:24:02,372 Sleeping for 10s. Reason: RUNNING
2024-12-06 17:24:12,628 Sleeping for 8s. Reason: RUNNING
2024-12-06 17:24:20,895 Sleeping for 6s. Reason: RUNNING
2024-12-06 17:24:27,144 Sleeping for 7s. Reason: RUNNING
2024-12-06 17:24:34,403 Sleeping for 9s. Reason: RUNNING
2024-12-06 17:24:43,665 Sleeping for 9s. Reason: RUNNING
2024-12-06 17:24:53,961 Sleeping for 5s. Reason: PENDING
2024-12-06 17:24:59,216 Sleeping for 9s. Reason: RUNNING
2024-12-06 17:25:08,472 Sleeping for 10s. Reason: RUNNING
2024-12-06 17:25:18,729 Sleeping for 7s. Reason: RUNNING
2024-12-06 17:25:25,990 Sleeping for 10s. Reason: RUNNING
2024-12-06 17:25:38,350 Setting max_seq=508, max_extra_seq=2048
2024-12-06 17:27:44,992 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=42.4 pTM=0.24 ipTM=0.122
2024-12-06 17:28:00,906 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=44.4 pTM=0.254 ipTM=0.128 tol=14.6
2024-12-06 17:28:16,844 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.1 pTM=0.264 ipTM=0.137 tol=8.77
2024-12-06 17:28:32,819 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.1 pTM=0.273 ipTM=0.135 tol=3.83
2024-12-06 17:28:48,814 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.9 pTM=0.275 ipTM=0.127 tol=6.82
2024-12-06 17:29:04,854 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47 pTM=0.273 ipTM=0.124 tol=5.04
2024-12-06 17:29:20,924 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.9 pTM=0.271 ipTM=0.122 tol=2.23
2024-12-06 17:29:37,011 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.8 pTM=0.27 ipTM=0.122 tol=3.59
2024-12-06 17:29:53,107 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.1 pTM=0.269 ipTM=0.12 tol=5.15
2024-12-06 17:30:09,176 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=46.9 pTM=0.272 ipTM=0.123 tol=14.9
2024-12-06 17:30:25,222 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.7 pTM=0.272 ipTM=0.134 tol=11.2
2024-12-06 17:30:41,262 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=46.7 pTM=0.272 ipTM=0.136 tol=8
2024-12-06 17:30:57,308 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=46.6 pTM=0.273 ipTM=0.141 tol=8.39
2024-12-06 17:31:13,346 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=46.6 pTM=0.273 ipTM=0.144 tol=8.35
2024-12-06 17:31:29,393 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.7 pTM=0.274 ipTM=0.148 tol=3.99
2024-12-06 17:31:45,444 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.8 pTM=0.275 ipTM=0.149 tol=4.04
2024-12-06 17:32:01,484 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.6 pTM=0.278 ipTM=0.153 tol=6.36
2024-12-06 17:32:17,528 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.4 pTM=0.276 ipTM=0.15 tol=4.96
2024-12-06 17:32:33,563 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46.6 pTM=0.277 ipTM=0.154 tol=6.02
2024-12-06 17:32:49,614 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.9 pTM=0.278 ipTM=0.156 tol=4.83
2024-12-06 17:33:05,647 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=46.8 pTM=0.277 ipTM=0.154 tol=2.24
2024-12-06 17:33:21,672 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.8 pTM=0.278 ipTM=0.16 tol=4.79
2024-12-06 17:33:37,684 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.6 pTM=0.279 ipTM=0.162 tol=3.8
2024-12-06 17:33:53,716 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.1 pTM=0.279 ipTM=0.164 tol=3.92
2024-12-06 17:34:09,745 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46.7 pTM=0.28 ipTM=0.162 tol=5
2024-12-06 17:34:25,759 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.7 pTM=0.28 ipTM=0.164 tol=5.2
2024-12-06 17:34:41,789 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.8 pTM=0.28 ipTM=0.161 tol=3.03
2024-12-06 17:34:57,820 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.7 pTM=0.28 ipTM=0.162 tol=3.22
2024-12-06 17:35:13,834 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46.7 pTM=0.281 ipTM=0.164 tol=2.51
2024-12-06 17:35:29,845 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=46.8 pTM=0.282 ipTM=0.165 tol=2.6
2024-12-06 17:35:45,877 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=46.8 pTM=0.28 ipTM=0.164 tol=4.3
2024-12-06 17:35:45,878 alphafold2_multimer_v3_model_1_seed_000 took 602.9s (30 recycles)
2024-12-06 17:36:02,432 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=42.2 pTM=0.255 ipTM=0.128
2024-12-06 17:36:18,486 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.3 pTM=0.272 ipTM=0.143 tol=13.5
2024-12-06 17:36:34,568 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.5 pTM=0.274 ipTM=0.14 tol=9.02
2024-12-06 17:36:50,642 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45.2 pTM=0.275 ipTM=0.141 tol=6.2
2024-12-06 17:37:06,716 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=45.2 pTM=0.273 ipTM=0.141 tol=7.03
2024-12-06 17:37:22,802 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=45.3 pTM=0.274 ipTM=0.141 tol=6.13
2024-12-06 17:37:38,879 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=45.1 pTM=0.27 ipTM=0.137 tol=6.37
2024-12-06 17:37:54,955 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=45.2 pTM=0.271 ipTM=0.14 tol=7.05
2024-12-06 17:38:11,033 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=45.6 pTM=0.271 ipTM=0.143 tol=6.83
2024-12-06 17:38:27,096 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=45.7 pTM=0.273 ipTM=0.144 tol=4.46
2024-12-06 17:38:43,159 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=45.8 pTM=0.274 ipTM=0.146 tol=3.46
2024-12-06 17:38:59,222 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=45.6 pTM=0.272 ipTM=0.143 tol=2.87
2024-12-06 17:39:15,282 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=45.5 pTM=0.273 ipTM=0.146 tol=2.19
2024-12-06 17:39:31,336 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=45.5 pTM=0.273 ipTM=0.149 tol=2.97
2024-12-06 17:39:47,387 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=45.5 pTM=0.273 ipTM=0.149 tol=2.46
2024-12-06 17:40:03,445 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=45.5 pTM=0.276 ipTM=0.151 tol=2.69
2024-12-06 17:40:19,493 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=45.6 pTM=0.277 ipTM=0.155 tol=3.19
2024-12-06 17:40:35,555 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=45.4 pTM=0.276 ipTM=0.15 tol=2.53
2024-12-06 17:40:51,606 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=45.7 pTM=0.278 ipTM=0.154 tol=2.01
2024-12-06 17:41:07,663 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=45.7 pTM=0.279 ipTM=0.155 tol=2.49
2024-12-06 17:41:23,713 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=45.6 pTM=0.277 ipTM=0.152 tol=2.51
2024-12-06 17:41:39,757 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=45.6 pTM=0.278 ipTM=0.155 tol=1.71
2024-12-06 17:41:55,811 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=45.7 pTM=0.278 ipTM=0.152 tol=2.25
2024-12-06 17:42:11,865 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=45.9 pTM=0.277 ipTM=0.151 tol=3.39
2024-12-06 17:42:27,914 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=45.7 pTM=0.276 ipTM=0.15 tol=3.59
2024-12-06 17:42:43,973 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=45.8 pTM=0.275 ipTM=0.15 tol=4.69
2024-12-06 17:43:00,026 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=45.6 pTM=0.275 ipTM=0.149 tol=3.3
2024-12-06 17:43:16,082 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=45.5 pTM=0.275 ipTM=0.15 tol=3.34
2024-12-06 17:43:32,150 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=45.5 pTM=0.276 ipTM=0.153 tol=2.56
2024-12-06 17:43:48,213 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=45.8 pTM=0.279 ipTM=0.157 tol=1.76
2024-12-06 17:44:04,260 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=45.8 pTM=0.277 ipTM=0.153 tol=2.79
2024-12-06 17:44:04,261 alphafold2_multimer_v3_model_2_seed_000 took 497.9s (30 recycles)
2024-12-06 17:44:20,955 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=41.7 pTM=0.246 ipTM=0.142
2024-12-06 17:44:37,194 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=40.8 pTM=0.24 ipTM=0.117 tol=25.5
2024-12-06 17:44:53,449 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=40.7 pTM=0.246 ipTM=0.142 tol=20.3
2024-12-06 17:45:09,691 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.6 pTM=0.249 ipTM=0.141 tol=13.4
2024-12-06 17:45:25,919 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=43.2 pTM=0.269 ipTM=0.152 tol=6.58
2024-12-06 17:45:42,153 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43.1 pTM=0.27 ipTM=0.152 tol=10.7
2024-12-06 17:45:58,396 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.1 pTM=0.268 ipTM=0.146 tol=4.68
2024-12-06 17:46:14,617 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=43.4 pTM=0.271 ipTM=0.152 tol=7.94
2024-12-06 17:46:30,846 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=43.5 pTM=0.268 ipTM=0.141 tol=4.32
2024-12-06 17:46:47,062 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=43.2 pTM=0.267 ipTM=0.135 tol=7.52
2024-12-06 17:47:03,295 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=43.6 pTM=0.269 ipTM=0.138 tol=7.91
2024-12-06 17:47:19,499 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=43.3 pTM=0.272 ipTM=0.145 tol=7.93
2024-12-06 17:47:35,746 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=43.3 pTM=0.271 ipTM=0.142 tol=4.38
2024-12-06 17:47:51,970 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=43.4 pTM=0.271 ipTM=0.144 tol=5.57
2024-12-06 17:48:08,215 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=43.5 pTM=0.271 ipTM=0.143 tol=9.48
2024-12-06 17:48:24,459 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=43.5 pTM=0.27 ipTM=0.142 tol=2.92
2024-12-06 17:48:40,693 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=43.6 pTM=0.274 ipTM=0.146 tol=4.5
2024-12-06 17:48:56,928 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=43.4 pTM=0.272 ipTM=0.144 tol=2.82
2024-12-06 17:49:13,156 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=43.6 pTM=0.271 ipTM=0.139 tol=3.35
2024-12-06 17:49:29,387 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=43.7 pTM=0.273 ipTM=0.144 tol=3.34
2024-12-06 17:49:45,611 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=43.4 pTM=0.273 ipTM=0.144 tol=9.14
2024-12-06 17:50:01,827 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=43.6 pTM=0.276 ipTM=0.15 tol=6.42
2024-12-06 17:50:18,055 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=43.4 pTM=0.275 ipTM=0.147 tol=8.66
2024-12-06 17:50:34,260 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=43.8 pTM=0.276 ipTM=0.149 tol=5.98
2024-12-06 17:50:50,478 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=43.7 pTM=0.274 ipTM=0.144 tol=3.57
2024-12-06 17:51:06,697 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=43.7 pTM=0.277 ipTM=0.149 tol=8.27
2024-12-06 17:51:22,917 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=43.6 pTM=0.276 ipTM=0.148 tol=3.23
2024-12-06 17:51:39,136 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=43.7 pTM=0.276 ipTM=0.151 tol=3.43
2024-12-06 17:51:55,344 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=43.5 pTM=0.274 ipTM=0.147 tol=4.08
2024-12-06 17:52:11,555 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=43.6 pTM=0.274 ipTM=0.147 tol=6.42
2024-12-06 17:52:27,759 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=43.8 pTM=0.278 ipTM=0.154 tol=4.52
2024-12-06 17:52:27,760 alphafold2_multimer_v3_model_3_seed_000 took 503.0s (30 recycles)
2024-12-06 17:52:44,488 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=40.6 pTM=0.243 ipTM=0.134
2024-12-06 17:53:00,661 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=41.8 pTM=0.245 ipTM=0.142 tol=18.3
2024-12-06 17:53:16,811 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=42.7 pTM=0.247 ipTM=0.151 tol=11.1
2024-12-06 17:53:32,947 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.8 pTM=0.255 ipTM=0.151 tol=6.82
2024-12-06 17:53:49,083 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=44.1 pTM=0.256 ipTM=0.157 tol=4.31
2024-12-06 17:54:05,214 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.4 pTM=0.257 ipTM=0.156 tol=3.82
2024-12-06 17:54:21,339 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=44.3 pTM=0.255 ipTM=0.151 tol=3.96
2024-12-06 17:54:37,470 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44.5 pTM=0.254 ipTM=0.151 tol=2.78
2024-12-06 17:54:53,599 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=44.7 pTM=0.256 ipTM=0.15 tol=3.87
2024-12-06 17:55:09,735 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44.5 pTM=0.257 ipTM=0.149 tol=3.64
2024-12-06 17:55:25,872 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.6 pTM=0.257 ipTM=0.147 tol=2.8
2024-12-06 17:55:42,009 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=44.4 pTM=0.255 ipTM=0.147 tol=4.09
2024-12-06 17:55:58,156 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=44.5 pTM=0.255 ipTM=0.145 tol=3.52
2024-12-06 17:56:14,296 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.4 pTM=0.255 ipTM=0.15 tol=4.78
2024-12-06 17:56:30,438 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=44.5 pTM=0.255 ipTM=0.148 tol=2.9
2024-12-06 17:56:46,569 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=44.7 pTM=0.256 ipTM=0.149 tol=2.44
2024-12-06 17:57:02,698 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=44.6 pTM=0.257 ipTM=0.15 tol=4.23
2024-12-06 17:57:18,830 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44.6 pTM=0.258 ipTM=0.15 tol=2.19
2024-12-06 17:57:34,958 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=44.6 pTM=0.258 ipTM=0.153 tol=1.91
2024-12-06 17:57:51,086 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=44.8 pTM=0.258 ipTM=0.15 tol=2.13
2024-12-06 17:58:07,225 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=44.6 pTM=0.256 ipTM=0.149 tol=2.85
2024-12-06 17:58:23,348 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=44.5 pTM=0.255 ipTM=0.149 tol=2.19
2024-12-06 17:58:39,481 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=44.5 pTM=0.257 ipTM=0.147 tol=2.75
2024-12-06 17:58:55,607 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=44.7 pTM=0.257 ipTM=0.148 tol=2.86
2024-12-06 17:59:11,749 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=44.5 pTM=0.257 ipTM=0.148 tol=2.59
2024-12-06 17:59:27,870 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=44.6 pTM=0.258 ipTM=0.15 tol=2.13
2024-12-06 17:59:43,988 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=44.5 pTM=0.257 ipTM=0.149 tol=3.43
2024-12-06 18:00:00,120 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=44.5 pTM=0.258 ipTM=0.15 tol=2.49
2024-12-06 18:00:16,244 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=44.4 pTM=0.256 ipTM=0.151 tol=5.63
2024-12-06 18:00:32,364 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=44.5 pTM=0.259 ipTM=0.15 tol=6.6
2024-12-06 18:00:48,505 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=44.5 pTM=0.257 ipTM=0.15 tol=2.8
2024-12-06 18:00:48,506 alphafold2_multimer_v3_model_4_seed_000 took 500.2s (30 recycles)
2024-12-06 18:01:05,259 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=40.9 pTM=0.243 ipTM=0.128
2024-12-06 18:01:21,493 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=42 pTM=0.241 ipTM=0.118 tol=20.4
2024-12-06 18:01:37,738 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=43.5 pTM=0.25 ipTM=0.123 tol=9
2024-12-06 18:01:53,974 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=43.8 pTM=0.253 ipTM=0.127 tol=12.5
2024-12-06 18:02:10,204 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=44 pTM=0.254 ipTM=0.126 tol=10.3
2024-12-06 18:02:26,431 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=44.2 pTM=0.256 ipTM=0.129 tol=11.7
2024-12-06 18:02:42,657 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=44.2 pTM=0.253 ipTM=0.13 tol=6
2024-12-06 18:02:58,887 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.2 pTM=0.254 ipTM=0.137 tol=4.42
2024-12-06 18:03:15,118 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.4 pTM=0.254 ipTM=0.135 tol=7.12
2024-12-06 18:03:31,357 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44.1 pTM=0.255 ipTM=0.138 tol=7.61
2024-12-06 18:03:47,592 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=44.4 pTM=0.256 ipTM=0.132 tol=8.77
2024-12-06 18:04:03,838 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=44.1 pTM=0.256 ipTM=0.129 tol=7.07
2024-12-06 18:04:20,078 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=44 pTM=0.254 ipTM=0.125 tol=5.86
2024-12-06 18:04:36,309 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=44.2 pTM=0.253 ipTM=0.132 tol=10.6
2024-12-06 18:04:52,555 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=44.2 pTM=0.252 ipTM=0.128 tol=11.1
2024-12-06 18:05:08,799 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=44.2 pTM=0.252 ipTM=0.126 tol=11.1
2024-12-06 18:05:25,038 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=44.3 pTM=0.253 ipTM=0.132 tol=6.53
2024-12-06 18:05:41,291 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=44.4 pTM=0.253 ipTM=0.138 tol=3.95
2024-12-06 18:05:57,523 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=44.5 pTM=0.253 ipTM=0.133 tol=5.01
2024-12-06 18:06:13,765 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=44.4 pTM=0.253 ipTM=0.132 tol=4.44
2024-12-06 18:06:30,006 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=44.4 pTM=0.251 ipTM=0.128 tol=4.55
2024-12-06 18:06:46,251 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=44.1 pTM=0.252 ipTM=0.132 tol=7.8
2024-12-06 18:07:02,494 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=44.2 pTM=0.254 ipTM=0.13 tol=8.26
2024-12-06 18:07:18,734 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=44.4 pTM=0.253 ipTM=0.13 tol=2.56
2024-12-06 18:07:34,984 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=44.3 pTM=0.254 ipTM=0.132 tol=6.97
2024-12-06 18:07:51,209 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=44.2 pTM=0.255 ipTM=0.141 tol=6.12
2024-12-06 18:08:07,443 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=44.1 pTM=0.255 ipTM=0.14 tol=3.42
2024-12-06 18:08:23,683 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=44.2 pTM=0.254 ipTM=0.145 tol=7.86
2024-12-06 18:08:39,939 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=44.3 pTM=0.254 ipTM=0.144 tol=7.43
2024-12-06 18:08:56,196 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=44.5 pTM=0.254 ipTM=0.144 tol=3.75
2024-12-06 18:09:12,438 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=44.4 pTM=0.254 ipTM=0.137 tol=6.35
2024-12-06 18:09:12,439 alphafold2_multimer_v3_model_5_seed_000 took 503.4s (30 recycles)
2024-12-06 18:09:12,960 reranking models by 'multimer' metric
2024-12-06 18:09:16,556 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 18:10:12,404 Relaxation took 59.4s
2024-12-06 18:10:12,404 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=46.8 pTM=0.28 ipTM=0.164
2024-12-06 18:11:11,243 Relaxation took 58.8s
2024-12-06 18:11:11,243 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=43.8 pTM=0.278 ipTM=0.154
2024-12-06 18:12:03,986 Relaxation took 52.7s
2024-12-06 18:12:03,986 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=45.8 pTM=0.277 ipTM=0.153
2024-12-06 18:13:07,493 Relaxation took 63.5s
2024-12-06 18:13:07,493 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=44.5 pTM=0.257 ipTM=0.15
2024-12-06 18:14:00,758 Relaxation took 53.3s
2024-12-06 18:14:00,758 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=44.4 pTM=0.254 ipTM=0.137
2024-12-06 18:14:02,335 Done