2024-12-06 18:42:07,639 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 18:42:07,964 Running on GPU
2024-12-06 18:42:11,550 Found 6 citations for tools or databases
2024-12-06 18:42:11,551 Query 1/1: KCTD5_SLC9A3R1 (length 592)
2024-12-06 18:42:11,867 Sleeping for 7s. Reason: PENDING
2024-12-06 18:42:19,129 Sleeping for 5s. Reason: RUNNING
2024-12-06 18:42:24,385 Sleeping for 5s. Reason: RUNNING
2024-12-06 18:42:29,653 Sleeping for 9s. Reason: RUNNING
2024-12-06 18:42:38,911 Sleeping for 10s. Reason: RUNNING
2024-12-06 18:42:49,171 Sleeping for 6s. Reason: RUNNING
2024-12-06 18:42:55,422 Sleeping for 5s. Reason: RUNNING
2024-12-06 18:43:00,673 Sleeping for 9s. Reason: RUNNING
2024-12-06 18:43:09,931 Sleeping for 6s. Reason: RUNNING
2024-12-06 18:43:16,184 Sleeping for 8s. Reason: RUNNING
2024-12-06 18:43:24,448 Sleeping for 10s. Reason: RUNNING
2024-12-06 18:43:34,714 Sleeping for 8s. Reason: RUNNING
2024-12-06 18:43:42,977 Sleeping for 7s. Reason: RUNNING
2024-12-06 18:43:50,232 Sleeping for 6s. Reason: RUNNING
2024-12-06 18:43:56,495 Sleeping for 6s. Reason: RUNNING
2024-12-06 18:44:02,755 Sleeping for 10s. Reason: RUNNING
2024-12-06 18:44:13,013 Sleeping for 6s. Reason: RUNNING
2024-12-06 18:44:19,265 Sleeping for 5s. Reason: RUNNING
2024-12-06 18:44:24,527 Sleeping for 8s. Reason: RUNNING
2024-12-06 18:44:34,391 Sleeping for 5s. Reason: PENDING
2024-12-06 18:44:39,646 Sleeping for 9s. Reason: RUNNING
2024-12-06 18:44:48,899 Sleeping for 10s. Reason: RUNNING
2024-12-06 18:44:59,172 Sleeping for 5s. Reason: RUNNING
2024-12-06 18:45:04,426 Sleeping for 7s. Reason: RUNNING
2024-12-06 18:45:11,690 Sleeping for 9s. Reason: RUNNING
2024-12-06 18:45:20,948 Sleeping for 8s. Reason: RUNNING
2024-12-06 18:45:29,216 Sleeping for 6s. Reason: RUNNING
2024-12-06 18:45:35,470 Sleeping for 5s. Reason: RUNNING
2024-12-06 18:45:40,720 Sleeping for 5s. Reason: RUNNING
2024-12-06 18:45:45,979 Sleeping for 5s. Reason: RUNNING
2024-12-06 18:45:51,239 Sleeping for 8s. Reason: RUNNING
2024-12-06 18:46:02,068 Setting max_seq=508, max_extra_seq=2048
2024-12-06 18:48:01,044 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.9 pTM=0.273 ipTM=0.133
2024-12-06 18:48:07,880 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54 pTM=0.27 ipTM=0.121 tol=10
2024-12-06 18:48:14,729 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.3 pTM=0.267 ipTM=0.126 tol=7.41
2024-12-06 18:48:21,581 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.1 pTM=0.27 ipTM=0.134 tol=3.71
2024-12-06 18:48:28,435 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55 pTM=0.266 ipTM=0.147 tol=3.58
2024-12-06 18:48:35,291 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.5 pTM=0.271 ipTM=0.173 tol=3.11
2024-12-06 18:48:42,153 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56 pTM=0.271 ipTM=0.175 tol=2.04
2024-12-06 18:48:49,020 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.7 pTM=0.27 ipTM=0.165 tol=3.94
2024-12-06 18:48:55,895 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55.7 pTM=0.271 ipTM=0.161 tol=2.82
2024-12-06 18:49:02,769 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.9 pTM=0.271 ipTM=0.166 tol=3.46
2024-12-06 18:49:09,646 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.2 pTM=0.271 ipTM=0.167 tol=4.85
2024-12-06 18:49:16,533 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.7 pTM=0.272 ipTM=0.183 tol=2.91
2024-12-06 18:49:23,416 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.5 pTM=0.274 ipTM=0.205 tol=3.6
2024-12-06 18:49:30,303 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.9 pTM=0.275 ipTM=0.204 tol=2.8
2024-12-06 18:49:37,201 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.6 pTM=0.274 ipTM=0.199 tol=2.1
2024-12-06 18:49:44,098 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.3 pTM=0.273 ipTM=0.205 tol=2.75
2024-12-06 18:49:50,991 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.6 pTM=0.272 ipTM=0.211 tol=2.53
2024-12-06 18:49:57,893 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.6 pTM=0.272 ipTM=0.21 tol=2.97
2024-12-06 18:50:04,797 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.7 pTM=0.273 ipTM=0.212 tol=1.41
2024-12-06 18:50:11,704 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.5 pTM=0.273 ipTM=0.217 tol=2.57
2024-12-06 18:50:18,612 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.5 pTM=0.273 ipTM=0.198 tol=2.28
2024-12-06 18:50:25,519 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.3 pTM=0.272 ipTM=0.195 tol=1.91
2024-12-06 18:50:32,432 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.3 pTM=0.274 ipTM=0.206 tol=1.9
2024-12-06 18:50:39,351 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.4 pTM=0.271 ipTM=0.195 tol=1.6
2024-12-06 18:50:46,266 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.3 pTM=0.271 ipTM=0.19 tol=3.2
2024-12-06 18:50:53,188 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.3 pTM=0.271 ipTM=0.205 tol=1.81
2024-12-06 18:51:00,106 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.4 pTM=0.27 ipTM=0.199 tol=3.33
2024-12-06 18:51:07,028 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.2 pTM=0.271 ipTM=0.192 tol=3.47
2024-12-06 18:51:13,946 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.2 pTM=0.271 ipTM=0.177 tol=2.91
2024-12-06 18:51:20,865 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.2 pTM=0.271 ipTM=0.171 tol=3.83
2024-12-06 18:51:27,784 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.3 pTM=0.27 ipTM=0.166 tol=2.98
2024-12-06 18:51:27,784 alphafold2_multimer_v3_model_1_seed_000 took 320.7s (30 recycles)
2024-12-06 18:51:34,933 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.4 pTM=0.271 ipTM=0.124
2024-12-06 18:51:41,871 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.5 pTM=0.269 ipTM=0.146 tol=8.7
2024-12-06 18:51:48,813 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59 pTM=0.266 ipTM=0.154 tol=4.42
2024-12-06 18:51:55,755 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.9 pTM=0.27 ipTM=0.177 tol=3.18
2024-12-06 18:52:02,690 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.1 pTM=0.271 ipTM=0.244 tol=3.68
2024-12-06 18:52:09,625 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.3 pTM=0.273 ipTM=0.272 tol=2.07
2024-12-06 18:52:16,569 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.6 pTM=0.274 ipTM=0.274 tol=1.95
2024-12-06 18:52:23,506 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.6 pTM=0.274 ipTM=0.284 tol=6.09
2024-12-06 18:52:30,438 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=59.6 pTM=0.274 ipTM=0.295 tol=6.6
2024-12-06 18:52:37,385 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.5 pTM=0.274 ipTM=0.303 tol=2.1
2024-12-06 18:52:44,314 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59.7 pTM=0.273 ipTM=0.307 tol=3.1
2024-12-06 18:52:51,255 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.4 pTM=0.274 ipTM=0.303 tol=2.66
2024-12-06 18:52:58,189 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.8 pTM=0.276 ipTM=0.306 tol=2.01
2024-12-06 18:53:05,121 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.9 pTM=0.277 ipTM=0.309 tol=3.16
2024-12-06 18:53:12,067 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59.8 pTM=0.276 ipTM=0.306 tol=3.57
2024-12-06 18:53:19,007 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.9 pTM=0.276 ipTM=0.306 tol=3.21
2024-12-06 18:53:25,940 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.9 pTM=0.274 ipTM=0.306 tol=2.9
2024-12-06 18:53:32,881 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.9 pTM=0.277 ipTM=0.308 tol=1.38
2024-12-06 18:53:39,812 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59.8 pTM=0.276 ipTM=0.309 tol=1.37
2024-12-06 18:53:46,746 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60 pTM=0.278 ipTM=0.313 tol=1.25
2024-12-06 18:53:53,681 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=59.9 pTM=0.276 ipTM=0.308 tol=2.33
2024-12-06 18:54:00,613 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59.8 pTM=0.277 ipTM=0.311 tol=2.14
2024-12-06 18:54:07,557 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.8 pTM=0.278 ipTM=0.31 tol=1.36
2024-12-06 18:54:14,498 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60 pTM=0.275 ipTM=0.309 tol=3.14
2024-12-06 18:54:21,436 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.9 pTM=0.276 ipTM=0.309 tol=2.02
2024-12-06 18:54:28,372 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=59.8 pTM=0.277 ipTM=0.312 tol=2.68
2024-12-06 18:54:35,313 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59.6 pTM=0.274 ipTM=0.31 tol=2.9
2024-12-06 18:54:42,257 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.7 pTM=0.275 ipTM=0.31 tol=1.34
2024-12-06 18:54:49,202 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59.7 pTM=0.276 ipTM=0.305 tol=1.93
2024-12-06 18:54:56,134 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.6 pTM=0.276 ipTM=0.306 tol=1.14
2024-12-06 18:55:03,082 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.1 pTM=0.274 ipTM=0.306 tol=1.24
2024-12-06 18:55:03,083 alphafold2_multimer_v3_model_2_seed_000 took 215.1s (30 recycles)
2024-12-06 18:55:10,278 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.1 pTM=0.268 ipTM=0.155
2024-12-06 18:55:17,228 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57.2 pTM=0.262 ipTM=0.119 tol=10
2024-12-06 18:55:24,189 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.8 pTM=0.268 ipTM=0.163 tol=8.83
2024-12-06 18:55:31,139 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.7 pTM=0.272 ipTM=0.187 tol=5.32
2024-12-06 18:55:38,094 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.3 pTM=0.275 ipTM=0.205 tol=2.31
2024-12-06 18:55:45,046 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.8 pTM=0.273 ipTM=0.186 tol=1.77
2024-12-06 18:55:52,000 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.7 pTM=0.271 ipTM=0.164 tol=3.29
2024-12-06 18:55:58,959 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.2 pTM=0.275 ipTM=0.156 tol=3.58
2024-12-06 18:56:05,906 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.2 pTM=0.271 ipTM=0.122 tol=4.37
2024-12-06 18:56:12,865 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.2 pTM=0.269 ipTM=0.12 tol=5.33
2024-12-06 18:56:19,816 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.1 pTM=0.272 ipTM=0.163 tol=3.49
2024-12-06 18:56:26,768 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.7 pTM=0.273 ipTM=0.157 tol=2.85
2024-12-06 18:56:33,716 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.5 pTM=0.275 ipTM=0.146 tol=4.68
2024-12-06 18:56:40,661 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58 pTM=0.276 ipTM=0.167 tol=2.9
2024-12-06 18:56:47,613 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.2 pTM=0.274 ipTM=0.14 tol=7.24
2024-12-06 18:56:54,565 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.5 pTM=0.274 ipTM=0.154 tol=5.04
2024-12-06 18:57:01,507 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.5 pTM=0.272 ipTM=0.145 tol=3.67
2024-12-06 18:57:08,452 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.2 pTM=0.275 ipTM=0.161 tol=2.53
2024-12-06 18:57:15,404 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.1 pTM=0.27 ipTM=0.127 tol=2.37
2024-12-06 18:57:22,347 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.3 pTM=0.274 ipTM=0.132 tol=4.62
2024-12-06 18:57:29,295 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.4 pTM=0.271 ipTM=0.124 tol=4.59
2024-12-06 18:57:36,246 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.5 pTM=0.275 ipTM=0.152 tol=2.42
2024-12-06 18:57:43,200 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.9 pTM=0.269 ipTM=0.124 tol=5.99
2024-12-06 18:57:50,160 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.3 pTM=0.271 ipTM=0.124 tol=4.52
2024-12-06 18:57:57,118 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.2 pTM=0.274 ipTM=0.129 tol=3.43
2024-12-06 18:58:04,074 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.3 pTM=0.273 ipTM=0.162 tol=3.02
2024-12-06 18:58:11,031 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.4 pTM=0.269 ipTM=0.137 tol=6.16
2024-12-06 18:58:17,985 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55 pTM=0.274 ipTM=0.137 tol=11.1
2024-12-06 18:58:24,933 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.2 pTM=0.272 ipTM=0.134 tol=9.21
2024-12-06 18:58:31,889 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56.1 pTM=0.271 ipTM=0.148 tol=5.35
2024-12-06 18:58:38,845 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57 pTM=0.27 ipTM=0.124 tol=5.14
2024-12-06 18:58:38,845 alphafold2_multimer_v3_model_3_seed_000 took 215.5s (30 recycles)
2024-12-06 18:58:45,996 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.9 pTM=0.273 ipTM=0.167
2024-12-06 18:58:52,935 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.6 pTM=0.267 ipTM=0.14 tol=11.5
2024-12-06 18:58:59,866 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.2 pTM=0.266 ipTM=0.128 tol=5.7
2024-12-06 18:59:06,788 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.2 pTM=0.268 ipTM=0.161 tol=6.27
2024-12-06 18:59:13,709 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.2 pTM=0.268 ipTM=0.175 tol=4.63
2024-12-06 18:59:20,644 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57 pTM=0.267 ipTM=0.193 tol=3.56
2024-12-06 18:59:27,580 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.7 pTM=0.268 ipTM=0.188 tol=3.71
2024-12-06 18:59:34,516 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.1 pTM=0.267 ipTM=0.17 tol=4.39
2024-12-06 18:59:41,459 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57 pTM=0.264 ipTM=0.123 tol=4.33
2024-12-06 18:59:48,402 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.2 pTM=0.265 ipTM=0.132 tol=3.03
2024-12-06 18:59:55,353 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.1 pTM=0.264 ipTM=0.135 tol=2.24
2024-12-06 19:00:02,296 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.1 pTM=0.264 ipTM=0.148 tol=2.16
2024-12-06 19:00:09,241 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.2 pTM=0.265 ipTM=0.148 tol=3
2024-12-06 19:00:16,177 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.6 pTM=0.263 ipTM=0.122 tol=3.47
2024-12-06 19:00:23,116 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57 pTM=0.265 ipTM=0.125 tol=5.51
2024-12-06 19:00:30,053 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.8 pTM=0.263 ipTM=0.114 tol=3.84
2024-12-06 19:00:37,007 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.3 pTM=0.262 ipTM=0.132 tol=3.91
2024-12-06 19:00:43,950 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.4 pTM=0.263 ipTM=0.121 tol=5.29
2024-12-06 19:00:50,894 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57 pTM=0.263 ipTM=0.12 tol=4.67
2024-12-06 19:00:57,835 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.1 pTM=0.265 ipTM=0.139 tol=3.12
2024-12-06 19:01:04,775 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57 pTM=0.262 ipTM=0.124 tol=6.72
2024-12-06 19:01:11,720 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57 pTM=0.265 ipTM=0.12 tol=6.31
2024-12-06 19:01:18,659 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.3 pTM=0.264 ipTM=0.139 tol=6.32
2024-12-06 19:01:25,604 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.6 pTM=0.261 ipTM=0.165 tol=4.67
2024-12-06 19:01:32,550 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.3 pTM=0.261 ipTM=0.147 tol=7.56
2024-12-06 19:01:39,487 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57 pTM=0.261 ipTM=0.134 tol=2.63
2024-12-06 19:01:46,432 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.8 pTM=0.26 ipTM=0.114 tol=3.62
2024-12-06 19:01:53,364 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.9 pTM=0.261 ipTM=0.118 tol=3.74
2024-12-06 19:02:00,306 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.2 pTM=0.263 ipTM=0.114 tol=1.45
2024-12-06 19:02:07,238 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.1 pTM=0.262 ipTM=0.12 tol=1.46
2024-12-06 19:02:14,185 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.5 pTM=0.261 ipTM=0.137 tol=2.82
2024-12-06 19:02:14,186 alphafold2_multimer_v3_model_4_seed_000 took 215.1s (30 recycles)
2024-12-06 19:02:21,366 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.3 pTM=0.266 ipTM=0.11
2024-12-06 19:02:28,320 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.7 pTM=0.259 ipTM=0.14 tol=9.93
2024-12-06 19:02:35,272 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.9 pTM=0.26 ipTM=0.15 tol=5.22
2024-12-06 19:02:42,221 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.1 pTM=0.262 ipTM=0.146 tol=4.25
2024-12-06 19:02:49,169 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.3 pTM=0.262 ipTM=0.172 tol=3.81
2024-12-06 19:02:56,112 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.7 pTM=0.264 ipTM=0.182 tol=0.783
2024-12-06 19:03:03,056 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.8 pTM=0.263 ipTM=0.179 tol=2.39
2024-12-06 19:03:10,003 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.7 pTM=0.263 ipTM=0.173 tol=1.84
2024-12-06 19:03:16,941 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59 pTM=0.265 ipTM=0.182 tol=2.87
2024-12-06 19:03:23,893 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.6 pTM=0.262 ipTM=0.183 tol=2.74
2024-12-06 19:03:30,843 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.6 pTM=0.263 ipTM=0.177 tol=3.28
2024-12-06 19:03:37,794 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.5 pTM=0.264 ipTM=0.168 tol=2.65
2024-12-06 19:03:44,738 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.5 pTM=0.264 ipTM=0.167 tol=2.77
2024-12-06 19:03:51,684 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.8 pTM=0.264 ipTM=0.188 tol=3.88
2024-12-06 19:03:58,631 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.2 pTM=0.263 ipTM=0.172 tol=2.69
2024-12-06 19:04:05,583 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.3 pTM=0.262 ipTM=0.16 tol=3.62
2024-12-06 19:04:12,550 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.5 pTM=0.263 ipTM=0.16 tol=2.96
2024-12-06 19:04:19,488 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58 pTM=0.263 ipTM=0.159 tol=3.16
2024-12-06 19:04:26,437 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.3 pTM=0.264 ipTM=0.161 tol=3.83
2024-12-06 19:04:33,397 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.3 pTM=0.263 ipTM=0.152 tol=3.84
2024-12-06 19:04:40,348 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.5 pTM=0.264 ipTM=0.154 tol=3.46
2024-12-06 19:04:47,295 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.5 pTM=0.265 ipTM=0.14 tol=2.25
2024-12-06 19:04:54,249 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.2 pTM=0.265 ipTM=0.136 tol=3.3
2024-12-06 19:05:01,208 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.3 pTM=0.263 ipTM=0.121 tol=3.28
2024-12-06 19:05:08,162 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.5 pTM=0.268 ipTM=0.136 tol=3.95
2024-12-06 19:05:15,119 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.3 pTM=0.272 ipTM=0.19 tol=4.42
2024-12-06 19:05:22,087 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.1 pTM=0.268 ipTM=0.167 tol=5.86
2024-12-06 19:05:29,030 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.6 pTM=0.269 ipTM=0.156 tol=5.73
2024-12-06 19:05:35,988 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.6 pTM=0.269 ipTM=0.152 tol=5.32
2024-12-06 19:05:42,942 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.5 pTM=0.271 ipTM=0.175 tol=4.61
2024-12-06 19:05:49,893 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.5 pTM=0.27 ipTM=0.179 tol=4.86
2024-12-06 19:05:49,893 alphafold2_multimer_v3_model_5_seed_000 took 215.5s (30 recycles)
2024-12-06 19:05:50,126 reranking models by 'multimer' metric
2024-12-06 19:05:53,110 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 19:06:25,813 Relaxation took 35.7s
2024-12-06 19:06:25,813 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.1 pTM=0.274 ipTM=0.306
2024-12-06 19:06:54,214 Relaxation took 28.4s
2024-12-06 19:06:54,215 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.5 pTM=0.27 ipTM=0.179
2024-12-06 19:10:09,681 Relaxation took 195.5s
2024-12-06 19:10:09,682 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.3 pTM=0.27 ipTM=0.166
2024-12-06 19:10:40,766 Relaxation took 31.1s
2024-12-06 19:10:40,766 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.5 pTM=0.261 ipTM=0.137
2024-12-06 19:11:29,572 Relaxation took 48.8s
2024-12-06 19:11:29,572 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57 pTM=0.27 ipTM=0.124
2024-12-06 19:11:30,694 Done