2024-12-06 18:57:02,912 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 18:57:03,219 Running on GPU
2024-12-06 18:57:03,931 Found 6 citations for tools or databases
2024-12-06 18:57:03,931 Query 1/1: KCTD6_OTUB2 (length 471)
2024-12-06 18:57:04,191 Sleeping for 7s. Reason: PENDING
2024-12-06 18:57:11,447 Sleeping for 5s. Reason: RUNNING
2024-12-06 18:57:16,701 Sleeping for 8s. Reason: RUNNING
2024-12-06 18:57:24,962 Sleeping for 10s. Reason: RUNNING
2024-12-06 18:57:35,226 Sleeping for 7s. Reason: RUNNING
2024-12-06 18:57:42,480 Sleeping for 7s. Reason: RUNNING
2024-12-06 18:57:51,188 Sleeping for 10s. Reason: PENDING
2024-12-06 18:58:01,451 Sleeping for 8s. Reason: RUNNING
2024-12-06 18:58:09,717 Sleeping for 7s. Reason: RUNNING
2024-12-06 18:58:16,985 Sleeping for 7s. Reason: RUNNING
2024-12-06 18:58:24,261 Sleeping for 6s. Reason: RUNNING
2024-12-06 18:58:32,299 Setting max_seq=508, max_extra_seq=2048
2024-12-06 19:01:16,834 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.5 pTM=0.566 ipTM=0.234
2024-12-06 19:01:21,711 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.4 pTM=0.549 ipTM=0.177 tol=7.16
2024-12-06 19:01:26,595 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.8 pTM=0.549 ipTM=0.174 tol=2.37
2024-12-06 19:01:31,469 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.4 pTM=0.547 ipTM=0.172 tol=2.98
2024-12-06 19:01:36,347 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74.2 pTM=0.549 ipTM=0.179 tol=2.59
2024-12-06 19:01:41,220 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.9 pTM=0.548 ipTM=0.173 tol=0.753
2024-12-06 19:01:46,100 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.2 pTM=0.546 ipTM=0.17 tol=0.564
2024-12-06 19:01:50,967 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=74.8 pTM=0.559 ipTM=0.208 tol=0.96
2024-12-06 19:01:55,850 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=75.8 pTM=0.544 ipTM=0.193 tol=1.97
2024-12-06 19:02:00,730 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.4 pTM=0.547 ipTM=0.172 tol=2.18
2024-12-06 19:02:05,611 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.9 pTM=0.549 ipTM=0.177 tol=1.34
2024-12-06 19:02:10,490 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=75.2 pTM=0.546 ipTM=0.18 tol=1.49
2024-12-06 19:02:15,370 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.3 pTM=0.55 ipTM=0.177 tol=0.992
2024-12-06 19:02:20,250 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=75.2 pTM=0.549 ipTM=0.187 tol=1.51
2024-12-06 19:02:25,134 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74.8 pTM=0.555 ipTM=0.189 tol=2.57
2024-12-06 19:02:30,008 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.5 pTM=0.549 ipTM=0.176 tol=1.37
2024-12-06 19:02:34,895 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74.5 pTM=0.55 ipTM=0.177 tol=0.818
2024-12-06 19:02:39,786 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.6 pTM=0.554 ipTM=0.186 tol=1.62
2024-12-06 19:02:44,672 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.1 pTM=0.546 ipTM=0.169 tol=1.09
2024-12-06 19:02:49,553 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74 pTM=0.547 ipTM=0.172 tol=1.34
2024-12-06 19:02:54,438 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.6 pTM=0.545 ipTM=0.168 tol=0.758
2024-12-06 19:02:59,326 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.8 pTM=0.549 ipTM=0.178 tol=2.31
2024-12-06 19:03:04,223 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.4 pTM=0.546 ipTM=0.17 tol=2.57
2024-12-06 19:03:09,120 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.7 pTM=0.543 ipTM=0.165 tol=1.71
2024-12-06 19:03:14,012 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.3 pTM=0.543 ipTM=0.163 tol=2.39
2024-12-06 19:03:18,912 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.8 pTM=0.546 ipTM=0.17 tol=1.9
2024-12-06 19:03:23,812 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.8 pTM=0.549 ipTM=0.175 tol=1.63
2024-12-06 19:03:28,705 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.3 pTM=0.557 ipTM=0.2 tol=3.43
2024-12-06 19:03:33,604 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.8 pTM=0.545 ipTM=0.163 tol=1.82
2024-12-06 19:03:38,508 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.3 pTM=0.546 ipTM=0.17 tol=2.03
2024-12-06 19:03:43,408 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=75.2 pTM=0.561 ipTM=0.229 tol=1.97
2024-12-06 19:03:43,408 alphafold2_multimer_v3_model_1_seed_000 took 305.5s (30 recycles)
2024-12-06 19:03:48,455 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=73.8 pTM=0.524 ipTM=0.142
2024-12-06 19:03:53,357 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=77.6 pTM=0.55 ipTM=0.195 tol=8.18
2024-12-06 19:03:58,258 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.6 pTM=0.535 ipTM=0.15 tol=2.2
2024-12-06 19:04:03,159 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.3 pTM=0.538 ipTM=0.156 tol=3.36
2024-12-06 19:04:08,058 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.8 pTM=0.54 ipTM=0.157 tol=2.92
2024-12-06 19:04:12,950 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=77.2 pTM=0.538 ipTM=0.156 tol=3.12
2024-12-06 19:04:17,856 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=77 pTM=0.542 ipTM=0.159 tol=1.56
2024-12-06 19:04:22,758 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.6 pTM=0.54 ipTM=0.159 tol=3.49
2024-12-06 19:04:27,657 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=77.9 pTM=0.538 ipTM=0.157 tol=3.2
2024-12-06 19:04:32,553 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=76.8 pTM=0.544 ipTM=0.169 tol=2.05
2024-12-06 19:04:37,447 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.9 pTM=0.535 ipTM=0.15 tol=1.24
2024-12-06 19:04:42,346 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=76.8 pTM=0.54 ipTM=0.159 tol=1.45
2024-12-06 19:04:47,244 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=76.8 pTM=0.54 ipTM=0.155 tol=2.83
2024-12-06 19:04:52,148 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=76.8 pTM=0.539 ipTM=0.156 tol=1.84
2024-12-06 19:04:57,049 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=77.2 pTM=0.536 ipTM=0.151 tol=1.4
2024-12-06 19:05:01,949 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=76.8 pTM=0.537 ipTM=0.153 tol=1.66
2024-12-06 19:05:06,859 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=76.8 pTM=0.541 ipTM=0.159 tol=2.16
2024-12-06 19:05:11,760 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=77.1 pTM=0.539 ipTM=0.156 tol=1.93
2024-12-06 19:05:16,661 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=76.9 pTM=0.54 ipTM=0.158 tol=1.83
2024-12-06 19:05:21,570 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=77.4 pTM=0.543 ipTM=0.165 tol=2.59
2024-12-06 19:05:26,475 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=77.1 pTM=0.542 ipTM=0.163 tol=1.34
2024-12-06 19:05:31,388 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=76.9 pTM=0.54 ipTM=0.158 tol=3.33
2024-12-06 19:05:36,299 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=77.3 pTM=0.537 ipTM=0.154 tol=2.2
2024-12-06 19:05:41,202 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=77.6 pTM=0.541 ipTM=0.161 tol=2.62
2024-12-06 19:05:46,101 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=76.9 pTM=0.54 ipTM=0.157 tol=1.79
2024-12-06 19:05:51,003 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=76.8 pTM=0.546 ipTM=0.169 tol=2.74
2024-12-06 19:05:55,905 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=77.9 pTM=0.541 ipTM=0.162 tol=2.53
2024-12-06 19:06:00,809 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=76.8 pTM=0.541 ipTM=0.159 tol=1.21
2024-12-06 19:06:05,716 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=76.5 pTM=0.54 ipTM=0.159 tol=2.95
2024-12-06 19:06:10,620 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=77.1 pTM=0.542 ipTM=0.161 tol=1.8
2024-12-06 19:06:15,524 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=77.2 pTM=0.537 ipTM=0.155 tol=1.14
2024-12-06 19:06:15,524 alphafold2_multimer_v3_model_2_seed_000 took 152.0s (30 recycles)
2024-12-06 19:06:20,580 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=77 pTM=0.641 ipTM=0.504
2024-12-06 19:06:25,506 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=78 pTM=0.547 ipTM=0.189 tol=3.73
2024-12-06 19:06:30,419 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=77.9 pTM=0.542 ipTM=0.158 tol=7.7
2024-12-06 19:06:35,334 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.4 pTM=0.541 ipTM=0.157 tol=1.36
2024-12-06 19:06:40,253 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=77.3 pTM=0.538 ipTM=0.153 tol=3.11
2024-12-06 19:06:45,165 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.6 pTM=0.535 ipTM=0.148 tol=2.15
2024-12-06 19:06:50,073 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.1 pTM=0.535 ipTM=0.145 tol=1.6
2024-12-06 19:06:54,979 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=77.4 pTM=0.536 ipTM=0.148 tol=2.17
2024-12-06 19:06:59,874 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77.8 pTM=0.534 ipTM=0.149 tol=1.57
2024-12-06 19:07:04,783 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78 pTM=0.535 ipTM=0.143 tol=1.98
2024-12-06 19:07:09,684 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=77 pTM=0.536 ipTM=0.149 tol=3.72
2024-12-06 19:07:14,587 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.6 pTM=0.539 ipTM=0.15 tol=2.46
2024-12-06 19:07:19,485 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77.4 pTM=0.54 ipTM=0.159 tol=3.49
2024-12-06 19:07:24,384 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.2 pTM=0.541 ipTM=0.156 tol=1.81
2024-12-06 19:07:29,282 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.5 pTM=0.544 ipTM=0.167 tol=2.47
2024-12-06 19:07:34,187 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=76.9 pTM=0.542 ipTM=0.157 tol=2
2024-12-06 19:07:39,083 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.5 pTM=0.546 ipTM=0.173 tol=1.95
2024-12-06 19:07:43,985 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77.2 pTM=0.542 ipTM=0.154 tol=1.99
2024-12-06 19:07:48,884 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=77.1 pTM=0.544 ipTM=0.171 tol=2.06
2024-12-06 19:07:53,790 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.8 pTM=0.542 ipTM=0.158 tol=1.71
2024-12-06 19:07:58,688 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.1 pTM=0.543 ipTM=0.163 tol=1.54
2024-12-06 19:08:03,592 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77 pTM=0.544 ipTM=0.161 tol=1.16
2024-12-06 19:08:08,493 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.6 pTM=0.542 ipTM=0.163 tol=1.16
2024-12-06 19:08:13,396 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.8 pTM=0.538 ipTM=0.148 tol=2.96
2024-12-06 19:08:18,298 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.4 pTM=0.542 ipTM=0.165 tol=2.79
2024-12-06 19:08:23,199 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.7 pTM=0.542 ipTM=0.156 tol=1.97
2024-12-06 19:08:28,100 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.2 pTM=0.544 ipTM=0.168 tol=2.37
2024-12-06 19:08:33,008 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.3 pTM=0.54 ipTM=0.153 tol=2.39
2024-12-06 19:08:37,905 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.3 pTM=0.541 ipTM=0.158 tol=2.16
2024-12-06 19:08:42,809 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.2 pTM=0.54 ipTM=0.153 tol=2.02
2024-12-06 19:08:47,705 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.2 pTM=0.542 ipTM=0.163 tol=2.43
2024-12-06 19:08:47,705 alphafold2_multimer_v3_model_3_seed_000 took 152.0s (30 recycles)
2024-12-06 19:08:52,776 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=79.4 pTM=0.576 ipTM=0.29
2024-12-06 19:08:57,703 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=76.9 pTM=0.547 ipTM=0.172 tol=4.39
2024-12-06 19:09:02,622 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.5 pTM=0.533 ipTM=0.152 tol=2.14
2024-12-06 19:09:07,530 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.2 pTM=0.531 ipTM=0.145 tol=2.93
2024-12-06 19:09:12,436 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.2 pTM=0.531 ipTM=0.141 tol=2.56
2024-12-06 19:09:17,334 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.5 pTM=0.542 ipTM=0.166 tol=3
2024-12-06 19:09:22,244 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=77 pTM=0.534 ipTM=0.148 tol=3.36
2024-12-06 19:09:27,143 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=75.9 pTM=0.535 ipTM=0.151 tol=4.43
2024-12-06 19:09:32,047 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=76.6 pTM=0.537 ipTM=0.151 tol=3.75
2024-12-06 19:09:36,945 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=76.1 pTM=0.534 ipTM=0.145 tol=2.95
2024-12-06 19:09:41,844 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=76.8 pTM=0.535 ipTM=0.147 tol=3.52
2024-12-06 19:09:46,746 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=75.9 pTM=0.538 ipTM=0.156 tol=2.03
2024-12-06 19:09:51,652 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.1 pTM=0.537 ipTM=0.151 tol=2.29
2024-12-06 19:09:56,545 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.1 pTM=0.542 ipTM=0.163 tol=1.67
2024-12-06 19:10:01,460 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77 pTM=0.535 ipTM=0.148 tol=1.1
2024-12-06 19:10:06,361 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=76.2 pTM=0.537 ipTM=0.152 tol=1.24
2024-12-06 19:10:11,263 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=76.8 pTM=0.538 ipTM=0.155 tol=1.46
2024-12-06 19:10:16,166 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=76.4 pTM=0.536 ipTM=0.15 tol=2.15
2024-12-06 19:10:21,070 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=76.6 pTM=0.535 ipTM=0.148 tol=1.94
2024-12-06 19:10:25,967 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75.8 pTM=0.535 ipTM=0.151 tol=1.42
2024-12-06 19:10:30,869 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=76.6 pTM=0.535 ipTM=0.147 tol=1.45
2024-12-06 19:10:35,771 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=75.8 pTM=0.531 ipTM=0.142 tol=1.88
2024-12-06 19:10:40,683 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=76.1 pTM=0.533 ipTM=0.144 tol=1.56
2024-12-06 19:10:45,588 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=75.2 pTM=0.533 ipTM=0.145 tol=1.64
2024-12-06 19:10:50,489 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=76.4 pTM=0.535 ipTM=0.148 tol=1.83
2024-12-06 19:10:55,383 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=75.9 pTM=0.539 ipTM=0.156 tol=1.6
2024-12-06 19:11:00,283 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=76.9 pTM=0.533 ipTM=0.146 tol=1.51
2024-12-06 19:11:05,180 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=76.1 pTM=0.536 ipTM=0.151 tol=1.31
2024-12-06 19:11:10,089 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=76.6 pTM=0.535 ipTM=0.149 tol=1.22
2024-12-06 19:11:14,988 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=76.6 pTM=0.533 ipTM=0.146 tol=1.74
2024-12-06 19:11:19,891 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=76.8 pTM=0.533 ipTM=0.144 tol=1.83
2024-12-06 19:11:19,891 alphafold2_multimer_v3_model_4_seed_000 took 152.0s (30 recycles)
2024-12-06 19:11:24,948 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.1 pTM=0.622 ipTM=0.444
2024-12-06 19:11:29,876 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.2 pTM=0.56 ipTM=0.195 tol=4.44
2024-12-06 19:11:34,784 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.2 pTM=0.562 ipTM=0.206 tol=5.88
2024-12-06 19:11:39,697 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=74.8 pTM=0.546 ipTM=0.166 tol=2.49
2024-12-06 19:11:44,611 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=74.7 pTM=0.542 ipTM=0.158 tol=2.83
2024-12-06 19:11:49,520 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=74 pTM=0.542 ipTM=0.159 tol=1.72
2024-12-06 19:11:54,434 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.4 pTM=0.538 ipTM=0.152 tol=2.52
2024-12-06 19:11:59,340 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.1 pTM=0.539 ipTM=0.154 tol=1.35
2024-12-06 19:12:04,247 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.9 pTM=0.544 ipTM=0.164 tol=3.74
2024-12-06 19:12:09,158 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.6 pTM=0.542 ipTM=0.158 tol=5.28
2024-12-06 19:12:14,067 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75 pTM=0.537 ipTM=0.148 tol=3.01
2024-12-06 19:12:18,973 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.2 pTM=0.535 ipTM=0.148 tol=3.64
2024-12-06 19:12:23,878 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.2 pTM=0.542 ipTM=0.159 tol=1.87
2024-12-06 19:12:28,782 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.3 pTM=0.541 ipTM=0.157 tol=1.41
2024-12-06 19:12:33,689 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.2 pTM=0.567 ipTM=0.211 tol=3.24
2024-12-06 19:12:38,591 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=75.4 pTM=0.539 ipTM=0.158 tol=4.15
2024-12-06 19:12:43,494 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=75 pTM=0.54 ipTM=0.155 tol=2.07
2024-12-06 19:12:48,396 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.6 pTM=0.548 ipTM=0.175 tol=3.11
2024-12-06 19:12:53,296 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.9 pTM=0.549 ipTM=0.173 tol=5.2
2024-12-06 19:12:58,197 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.4 pTM=0.54 ipTM=0.153 tol=2.21
2024-12-06 19:13:03,099 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.7 pTM=0.537 ipTM=0.151 tol=3.12
2024-12-06 19:13:07,994 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.9 pTM=0.542 ipTM=0.159 tol=2.51
2024-12-06 19:13:12,891 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.8 pTM=0.538 ipTM=0.153 tol=3.91
2024-12-06 19:13:17,791 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.2 pTM=0.54 ipTM=0.154 tol=2.51
2024-12-06 19:13:22,689 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=73.8 pTM=0.542 ipTM=0.165 tol=2.61
2024-12-06 19:13:27,587 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.1 pTM=0.56 ipTM=0.197 tol=1.99
2024-12-06 19:13:32,484 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.1 pTM=0.542 ipTM=0.163 tol=2.11
2024-12-06 19:13:37,386 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.2 pTM=0.541 ipTM=0.16 tol=1.5
2024-12-06 19:13:42,287 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.4 pTM=0.537 ipTM=0.152 tol=2.54
2024-12-06 19:13:47,182 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.2 pTM=0.54 ipTM=0.155 tol=1.77
2024-12-06 19:13:52,078 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.2 pTM=0.536 ipTM=0.149 tol=1.98
2024-12-06 19:13:52,079 alphafold2_multimer_v3_model_5_seed_000 took 152.0s (30 recycles)
2024-12-06 19:13:52,233 reranking models by 'multimer' metric
2024-12-06 19:13:55,168 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 19:14:26,016 Relaxation took 33.8s
2024-12-06 19:14:26,016 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.2 pTM=0.561 ipTM=0.229
2024-12-06 19:14:52,821 Relaxation took 26.8s
2024-12-06 19:14:52,821 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.2 pTM=0.542 ipTM=0.163
2024-12-06 19:15:21,430 Relaxation took 28.6s
2024-12-06 19:15:21,430 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=77.2 pTM=0.537 ipTM=0.155
2024-12-06 19:15:55,409 Relaxation took 34.0s
2024-12-06 19:15:55,409 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.2 pTM=0.536 ipTM=0.149
2024-12-06 19:16:08,595 Relaxation took 13.2s
2024-12-06 19:16:08,595 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=76.8 pTM=0.533 ipTM=0.144
2024-12-06 19:16:09,605 Done