2024-12-11 13:24:12,969 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-11 13:24:14,596 Running on GPU
2024-12-11 13:24:18,964 Found 6 citations for tools or databases
2024-12-11 13:24:18,964 Query 1/1: KIAA1984_RABGEF1 (length 1025)
2024-12-11 13:24:19,404 Sleeping for 8s. Reason: PENDING
2024-12-11 13:24:27,659 Sleeping for 8s. Reason: PENDING
2024-12-11 13:24:35,912 Sleeping for 5s. Reason: PENDING
2024-12-11 13:24:41,177 Sleeping for 9s. Reason: PENDING
2024-12-11 13:24:50,437 Sleeping for 6s. Reason: PENDING
2024-12-11 13:24:56,692 Sleeping for 6s. Reason: PENDING
2024-12-11 13:25:02,958 Sleeping for 10s. Reason: PENDING
2024-12-11 13:25:13,225 Sleeping for 10s. Reason: PENDING
2024-12-11 13:25:23,643 Sleeping for 7s. Reason: PENDING
2024-12-11 13:25:30,896 Sleeping for 8s. Reason: PENDING
2024-12-11 13:25:39,149 Sleeping for 5s. Reason: PENDING
2024-12-11 13:25:44,400 Sleeping for 6s. Reason: PENDING
2024-12-11 13:25:50,667 Sleeping for 9s. Reason: PENDING
2024-12-11 13:25:59,927 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:26:09,187 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:26:16,442 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:26:22,706 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:26:28,958 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:26:37,220 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:26:47,477 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:26:56,055 Sleeping for 5s. Reason: PENDING
2024-12-11 13:27:01,311 Sleeping for 9s. Reason: PENDING
2024-12-11 13:27:10,566 Sleeping for 9s. Reason: PENDING
2024-12-11 13:27:19,830 Sleeping for 9s. Reason: PENDING
2024-12-11 13:27:29,091 Sleeping for 10s. Reason: PENDING
2024-12-11 13:27:39,355 Sleeping for 6s. Reason: PENDING
2024-12-11 13:27:45,612 Sleeping for 6s. Reason: PENDING
2024-12-11 13:27:51,865 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:28:00,122 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:28:07,390 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:28:12,646 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:28:20,905 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:28:28,169 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:28:37,281 Setting max_seq=508, max_extra_seq=1985
2024-12-11 13:31:57,537 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.5 pTM=0.409 ipTM=0.333
2024-12-11 13:32:20,241 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.4 pTM=0.419 ipTM=0.354 tol=15.2
2024-12-11 13:32:43,061 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59 pTM=0.415 ipTM=0.319 tol=13.3
2024-12-11 13:33:05,930 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.5 pTM=0.42 ipTM=0.38 tol=7.62
2024-12-11 13:33:28,867 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.9 pTM=0.412 ipTM=0.357 tol=4.61
2024-12-11 13:33:51,848 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.8 pTM=0.412 ipTM=0.407 tol=6.22
2024-12-11 13:34:14,876 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.8 pTM=0.409 ipTM=0.402 tol=5.79
2024-12-11 13:34:37,894 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.5 pTM=0.41 ipTM=0.397 tol=4.75
2024-12-11 13:35:00,952 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.6 pTM=0.409 ipTM=0.388 tol=2.99
2024-12-11 13:35:24,022 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59 pTM=0.415 ipTM=0.416 tol=3.24
2024-12-11 13:35:47,099 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.6 pTM=0.414 ipTM=0.404 tol=4.12
2024-12-11 13:36:10,175 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.2 pTM=0.419 ipTM=0.422 tol=3.17
2024-12-11 13:36:33,259 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.3 pTM=0.417 ipTM=0.417 tol=4.13
2024-12-11 13:36:56,354 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.3 pTM=0.415 ipTM=0.407 tol=2.79
2024-12-11 13:37:19,443 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.9 pTM=0.413 ipTM=0.403 tol=2.44
2024-12-11 13:37:42,542 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.3 pTM=0.416 ipTM=0.433 tol=2.8
2024-12-11 13:38:05,636 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60 pTM=0.413 ipTM=0.436 tol=2.72
2024-12-11 13:38:28,721 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.2 pTM=0.414 ipTM=0.432 tol=4.09
2024-12-11 13:38:51,827 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.9 pTM=0.41 ipTM=0.438 tol=3.2
2024-12-11 13:39:14,916 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58 pTM=0.413 ipTM=0.449 tol=5.24
2024-12-11 13:39:38,012 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.1 pTM=0.406 ipTM=0.438 tol=3.98
2024-12-11 13:40:01,091 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58 pTM=0.413 ipTM=0.456 tol=4.04
2024-12-11 13:40:24,173 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.5 pTM=0.411 ipTM=0.45 tol=3.58
2024-12-11 13:40:47,233 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.9 pTM=0.41 ipTM=0.443 tol=3.91
2024-12-11 13:41:10,308 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.8 pTM=0.406 ipTM=0.427 tol=3.06
2024-12-11 13:41:33,359 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.7 pTM=0.41 ipTM=0.433 tol=3.53
2024-12-11 13:41:56,401 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.4 pTM=0.405 ipTM=0.425 tol=3.13
2024-12-11 13:42:19,449 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.2 pTM=0.407 ipTM=0.421 tol=3.54
2024-12-11 13:42:42,513 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=57.1 pTM=0.405 ipTM=0.424 tol=3.91
2024-12-11 13:43:05,568 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.2 pTM=0.409 ipTM=0.427 tol=2.9
2024-12-11 13:43:28,622 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57.3 pTM=0.407 ipTM=0.434 tol=2.79
2024-12-11 13:43:28,623 alphafold2_multimer_v3_model_1_seed_000 took 884.7s (30 recycles)
2024-12-11 13:43:52,361 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.9 pTM=0.398 ipTM=0.21
2024-12-11 13:44:15,482 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60 pTM=0.398 ipTM=0.2 tol=9.58
2024-12-11 13:44:38,603 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.3 pTM=0.394 ipTM=0.214 tol=7.46
2024-12-11 13:45:01,710 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.1 pTM=0.395 ipTM=0.189 tol=7.41
2024-12-11 13:45:24,805 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.9 pTM=0.402 ipTM=0.215 tol=8.39
2024-12-11 13:45:47,895 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.8 pTM=0.397 ipTM=0.25 tol=4.4
2024-12-11 13:46:11,015 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.4 pTM=0.394 ipTM=0.257 tol=3.26
2024-12-11 13:46:34,148 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.4 pTM=0.389 ipTM=0.212 tol=2.84
2024-12-11 13:46:57,322 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.9 pTM=0.387 ipTM=0.192 tol=6.14
2024-12-11 13:47:20,453 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.1 pTM=0.401 ipTM=0.241 tol=4.2
2024-12-11 13:47:43,565 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59.5 pTM=0.397 ipTM=0.197 tol=4.78
2024-12-11 13:48:06,702 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.7 pTM=0.393 ipTM=0.208 tol=3.83
2024-12-11 13:48:29,837 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.8 pTM=0.392 ipTM=0.209 tol=3.43
2024-12-11 13:48:52,968 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.5 pTM=0.396 ipTM=0.255 tol=4.75
2024-12-11 13:49:16,076 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.8 pTM=0.4 ipTM=0.282 tol=4.99
2024-12-11 13:49:39,154 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61 pTM=0.398 ipTM=0.279 tol=3.21
2024-12-11 13:50:02,244 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.9 pTM=0.392 ipTM=0.257 tol=3.26
2024-12-11 13:50:25,328 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61 pTM=0.4 ipTM=0.297 tol=4.26
2024-12-11 13:50:48,441 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.2 pTM=0.404 ipTM=0.304 tol=5.97
2024-12-11 13:51:11,584 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.8 pTM=0.404 ipTM=0.328 tol=2.94
2024-12-11 13:51:34,722 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.4 pTM=0.4 ipTM=0.321 tol=3.18
2024-12-11 13:51:57,860 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.2 pTM=0.396 ipTM=0.311 tol=10.5
2024-12-11 13:52:21,000 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.4 pTM=0.399 ipTM=0.328 tol=5.52
2024-12-11 13:52:44,139 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60 pTM=0.393 ipTM=0.304 tol=7.68
2024-12-11 13:53:07,268 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.8 pTM=0.391 ipTM=0.261 tol=4.15
2024-12-11 13:53:30,404 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.1 pTM=0.394 ipTM=0.288 tol=6.56
2024-12-11 13:53:53,540 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.2 pTM=0.388 ipTM=0.277 tol=5.71
2024-12-11 13:54:16,666 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.5 pTM=0.394 ipTM=0.286 tol=6.43
2024-12-11 13:54:39,803 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.6 pTM=0.391 ipTM=0.293 tol=6.05
2024-12-11 13:55:02,919 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.4 pTM=0.391 ipTM=0.282 tol=2.12
2024-12-11 13:55:26,035 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.7 pTM=0.393 ipTM=0.296 tol=2.4
2024-12-11 13:55:26,036 alphafold2_multimer_v3_model_2_seed_000 took 716.8s (30 recycles)
2024-12-11 13:55:49,790 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.1 pTM=0.383 ipTM=0.173
2024-12-11 13:56:12,896 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53 pTM=0.388 ipTM=0.148 tol=11.5
2024-12-11 13:56:36,000 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.1 pTM=0.386 ipTM=0.157 tol=7.42
2024-12-11 13:56:59,087 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.6 pTM=0.387 ipTM=0.163 tol=12.7
2024-12-11 13:57:22,153 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.5 pTM=0.387 ipTM=0.157 tol=6.48
2024-12-11 13:57:45,230 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51.3 pTM=0.386 ipTM=0.162 tol=5.27
2024-12-11 13:58:08,338 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.4 pTM=0.386 ipTM=0.17 tol=7.2
2024-12-11 13:58:31,440 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.4 pTM=0.389 ipTM=0.18 tol=3.07
2024-12-11 13:58:54,548 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.1 pTM=0.385 ipTM=0.172 tol=4.64
2024-12-11 13:59:17,659 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53 pTM=0.39 ipTM=0.195 tol=4.6
2024-12-11 13:59:40,789 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.9 pTM=0.384 ipTM=0.164 tol=3.49
2024-12-11 14:00:03,929 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.9 pTM=0.385 ipTM=0.175 tol=13.6
2024-12-11 14:00:27,075 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.2 pTM=0.38 ipTM=0.158 tol=8.88
2024-12-11 14:00:50,248 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.5 pTM=0.381 ipTM=0.186 tol=12.5
2024-12-11 14:01:13,417 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52 pTM=0.377 ipTM=0.155 tol=14.7
2024-12-11 14:01:36,578 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=51.3 pTM=0.384 ipTM=0.166 tol=5.84
2024-12-11 14:01:59,755 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=52.3 pTM=0.38 ipTM=0.178 tol=5.77
2024-12-11 14:02:22,905 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52.6 pTM=0.386 ipTM=0.175 tol=7.06
2024-12-11 14:02:46,088 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.4 pTM=0.38 ipTM=0.159 tol=8.53
2024-12-11 14:03:09,236 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51.5 pTM=0.379 ipTM=0.163 tol=7.83
2024-12-11 14:03:32,397 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.2 pTM=0.379 ipTM=0.221 tol=10.1
2024-12-11 14:03:55,530 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=51.1 pTM=0.385 ipTM=0.185 tol=7.73
2024-12-11 14:04:18,686 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.5 pTM=0.38 ipTM=0.179 tol=13.6
2024-12-11 14:04:41,860 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53 pTM=0.377 ipTM=0.206 tol=11
2024-12-11 14:05:05,005 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50.7 pTM=0.386 ipTM=0.185 tol=9.74
2024-12-11 14:05:28,179 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=51.5 pTM=0.384 ipTM=0.167 tol=5.07
2024-12-11 14:05:51,325 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.9 pTM=0.386 ipTM=0.239 tol=8.57
2024-12-11 14:06:14,471 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=51.9 pTM=0.386 ipTM=0.198 tol=4.87
2024-12-11 14:06:37,641 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.5 pTM=0.38 ipTM=0.174 tol=17
2024-12-11 14:07:00,866 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.1 pTM=0.378 ipTM=0.19 tol=10.5
2024-12-11 14:07:24,077 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=51.3 pTM=0.377 ipTM=0.157 tol=10.9
2024-12-11 14:07:24,078 alphafold2_multimer_v3_model_3_seed_000 took 717.4s (30 recycles)
2024-12-11 14:07:47,813 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.1 pTM=0.409 ipTM=0.332
2024-12-11 14:08:10,956 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.6 pTM=0.381 ipTM=0.18 tol=8.48
2024-12-11 14:08:34,096 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=49.6 pTM=0.381 ipTM=0.202 tol=12.8
2024-12-11 14:08:57,226 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49.2 pTM=0.378 ipTM=0.177 tol=9.91
2024-12-11 14:09:20,336 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.7 pTM=0.378 ipTM=0.161 tol=6.28
2024-12-11 14:09:43,465 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.4 pTM=0.374 ipTM=0.154 tol=5.67
2024-12-11 14:10:06,571 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.2 pTM=0.376 ipTM=0.155 tol=5.03
2024-12-11 14:10:29,727 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.9 pTM=0.375 ipTM=0.148 tol=5.78
2024-12-11 14:10:52,853 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49.7 pTM=0.374 ipTM=0.152 tol=5.08
2024-12-11 14:11:16,010 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.5 pTM=0.375 ipTM=0.191 tol=6.34
2024-12-11 14:11:39,151 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.4 pTM=0.376 ipTM=0.163 tol=5.11
2024-12-11 14:12:02,287 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.2 pTM=0.379 ipTM=0.156 tol=6.79
2024-12-11 14:12:25,420 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.2 pTM=0.377 ipTM=0.158 tol=3.23
2024-12-11 14:12:48,551 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.3 pTM=0.379 ipTM=0.158 tol=13.3
2024-12-11 14:13:11,691 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.7 pTM=0.377 ipTM=0.162 tol=4.8
2024-12-11 14:13:34,802 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.9 pTM=0.376 ipTM=0.158 tol=3.77
2024-12-11 14:13:57,934 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=50.4 pTM=0.373 ipTM=0.16 tol=4.4
2024-12-11 14:14:21,027 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.8 pTM=0.376 ipTM=0.154 tol=4.37
2024-12-11 14:14:44,169 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.1 pTM=0.374 ipTM=0.149 tol=4.54
2024-12-11 14:15:07,277 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.8 pTM=0.376 ipTM=0.153 tol=5.13
2024-12-11 14:15:30,418 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.7 pTM=0.375 ipTM=0.154 tol=5.21
2024-12-11 14:15:53,534 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.9 pTM=0.374 ipTM=0.151 tol=4.75
2024-12-11 14:16:16,684 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.7 pTM=0.375 ipTM=0.151 tol=4.51
2024-12-11 14:16:39,834 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.5 pTM=0.376 ipTM=0.199 tol=6.73
2024-12-11 14:17:02,976 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.2 pTM=0.375 ipTM=0.166 tol=4.64
2024-12-11 14:17:26,124 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.9 pTM=0.376 ipTM=0.172 tol=3.7
2024-12-11 14:17:49,262 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.3 pTM=0.375 ipTM=0.159 tol=3.65
2024-12-11 14:18:12,422 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50 pTM=0.376 ipTM=0.177 tol=4.65
2024-12-11 14:18:35,584 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49.8 pTM=0.375 ipTM=0.183 tol=2.93
2024-12-11 14:18:58,742 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.7 pTM=0.374 ipTM=0.175 tol=3.25
2024-12-11 14:19:21,924 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.3 pTM=0.377 ipTM=0.154 tol=3.71
2024-12-11 14:19:21,924 alphafold2_multimer_v3_model_4_seed_000 took 717.2s (30 recycles)
2024-12-11 14:19:45,799 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.5 pTM=0.393 ipTM=0.357
2024-12-11 14:20:09,033 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.5 pTM=0.4 ipTM=0.218 tol=18.6
2024-12-11 14:20:32,287 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.2 pTM=0.401 ipTM=0.242 tol=8.95
2024-12-11 14:20:55,550 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49 pTM=0.391 ipTM=0.176 tol=6.52
2024-12-11 14:21:18,809 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.7 pTM=0.389 ipTM=0.165 tol=6.48
2024-12-11 14:21:42,052 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.1 pTM=0.392 ipTM=0.209 tol=5.74
2024-12-11 14:22:05,257 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.2 pTM=0.398 ipTM=0.246 tol=6.92
2024-12-11 14:22:28,487 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.9 pTM=0.385 ipTM=0.186 tol=11.3
2024-12-11 14:22:51,725 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.4 pTM=0.385 ipTM=0.178 tol=6.61
2024-12-11 14:23:14,975 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52 pTM=0.395 ipTM=0.225 tol=6.59
2024-12-11 14:23:38,202 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=50.3 pTM=0.389 ipTM=0.196 tol=6.98
2024-12-11 14:24:01,442 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.7 pTM=0.385 ipTM=0.17 tol=6.08
2024-12-11 14:24:24,650 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50.7 pTM=0.383 ipTM=0.169 tol=5.86
2024-12-11 14:24:47,856 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.5 pTM=0.385 ipTM=0.182 tol=4.55
2024-12-11 14:25:11,087 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=50.7 pTM=0.383 ipTM=0.165 tol=3.84
2024-12-11 14:25:34,297 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.7 pTM=0.389 ipTM=0.207 tol=4.54
2024-12-11 14:25:57,457 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.2 pTM=0.382 ipTM=0.16 tol=9.06
2024-12-11 14:26:20,640 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=51.3 pTM=0.382 ipTM=0.172 tol=4.59
2024-12-11 14:26:43,850 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50 pTM=0.377 ipTM=0.159 tol=5.84
2024-12-11 14:27:07,038 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.9 pTM=0.376 ipTM=0.166 tol=7.04
2024-12-11 14:27:30,226 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.6 pTM=0.378 ipTM=0.165 tol=3.61
2024-12-11 14:27:53,395 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50 pTM=0.382 ipTM=0.168 tol=7.02
2024-12-11 14:28:16,592 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.8 pTM=0.386 ipTM=0.18 tol=5.36
2024-12-11 14:28:39,778 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.7 pTM=0.392 ipTM=0.228 tol=6.82
2024-12-11 14:29:03,011 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.5 pTM=0.386 ipTM=0.19 tol=4.58
2024-12-11 14:29:26,231 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.6 pTM=0.388 ipTM=0.206 tol=3.8
2024-12-11 14:29:49,437 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.7 pTM=0.388 ipTM=0.215 tol=6.25
2024-12-11 14:30:12,654 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51.3 pTM=0.386 ipTM=0.174 tol=7.26
2024-12-11 14:30:35,872 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.9 pTM=0.384 ipTM=0.169 tol=5.03
2024-12-11 14:30:59,085 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51 pTM=0.384 ipTM=0.177 tol=3.28
2024-12-11 14:31:22,280 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.3 pTM=0.396 ipTM=0.248 tol=7.3
2024-12-11 14:31:22,281 alphafold2_multimer_v3_model_5_seed_000 took 719.7s (30 recycles)
2024-12-11 14:31:22,931 reranking models by 'multimer' metric
2024-12-11 14:31:24,030 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-11 14:32:48,694 Relaxation took 85.7s
2024-12-11 14:32:48,694 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57.3 pTM=0.407 ipTM=0.434
2024-12-11 14:33:30,239 Relaxation took 41.5s
2024-12-11 14:33:30,239 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.7 pTM=0.393 ipTM=0.296
2024-12-11 14:35:10,952 Relaxation took 100.7s
2024-12-11 14:35:10,952 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.3 pTM=0.396 ipTM=0.248
2024-12-11 14:36:57,267 Relaxation took 106.3s
2024-12-11 14:36:57,267 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=51.3 pTM=0.377 ipTM=0.157
2024-12-11 14:38:13,108 Relaxation took 75.8s
2024-12-11 14:38:13,109 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.3 pTM=0.377 ipTM=0.154
2024-12-11 14:38:14,953 Done