2024-12-06 19:51:35,739 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 19:51:36,107 Running on GPU 2024-12-06 19:51:40,408 Found 6 citations for tools or databases 2024-12-06 19:51:40,408 Query 1/1: KLHL15_CD72 (length 963) 2024-12-06 19:51:40,707 Sleeping for 6s. Reason: PENDING 2024-12-06 19:51:46,973 Sleeping for 5s. Reason: RUNNING 2024-12-06 19:51:52,233 Sleeping for 10s. Reason: RUNNING 2024-12-06 19:52:02,498 Sleeping for 8s. Reason: RUNNING 2024-12-06 19:52:10,756 Sleeping for 9s. Reason: RUNNING 2024-12-06 19:52:20,018 Sleeping for 7s. Reason: RUNNING 2024-12-06 19:52:27,276 Sleeping for 8s. Reason: RUNNING 2024-12-06 19:52:35,539 Sleeping for 9s. Reason: RUNNING 2024-12-06 19:52:44,797 Sleeping for 9s. Reason: RUNNING 2024-12-06 19:52:54,059 Sleeping for 8s. Reason: RUNNING 2024-12-06 19:53:02,318 Sleeping for 10s. Reason: RUNNING 2024-12-06 19:53:12,590 Sleeping for 9s. Reason: RUNNING 2024-12-06 19:53:21,849 Sleeping for 6s. Reason: RUNNING 2024-12-06 19:53:28,123 Sleeping for 8s. Reason: RUNNING 2024-12-06 19:53:36,381 Sleeping for 5s. Reason: RUNNING 2024-12-06 19:53:43,294 Sleeping for 8s. Reason: PENDING 2024-12-06 19:53:51,557 Sleeping for 9s. Reason: RUNNING 2024-12-06 19:54:00,821 Sleeping for 7s. Reason: RUNNING 2024-12-06 19:54:08,078 Sleeping for 7s. Reason: RUNNING 2024-12-06 19:54:15,340 Sleeping for 9s. Reason: RUNNING 2024-12-06 19:54:24,603 Sleeping for 7s. Reason: RUNNING 2024-12-06 19:54:31,869 Sleeping for 8s. Reason: RUNNING 2024-12-06 19:54:40,128 Sleeping for 8s. Reason: RUNNING 2024-12-06 19:54:48,393 Sleeping for 8s. Reason: RUNNING 2024-12-06 19:54:56,648 Sleeping for 5s. Reason: RUNNING 2024-12-06 19:55:01,910 Sleeping for 10s. Reason: RUNNING 2024-12-06 19:55:15,374 Setting max_seq=508, max_extra_seq=2048 2024-12-06 19:59:03,526 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.3 pTM=0.594 ipTM=0.205 2024-12-06 19:59:28,026 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.9 pTM=0.59 ipTM=0.19 tol=6.93 2024-12-06 19:59:52,592 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.1 pTM=0.582 ipTM=0.185 tol=7.47 2024-12-06 20:00:17,201 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.9 pTM=0.585 ipTM=0.182 tol=4.59 2024-12-06 20:00:41,851 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.9 pTM=0.588 ipTM=0.188 tol=2.37 2024-12-06 20:01:06,508 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70 pTM=0.588 ipTM=0.189 tol=2.74 2024-12-06 20:01:31,194 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.2 pTM=0.59 ipTM=0.192 tol=2.7 2024-12-06 20:01:55,898 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.1 pTM=0.589 ipTM=0.188 tol=2.38 2024-12-06 20:02:20,592 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.1 pTM=0.588 ipTM=0.19 tol=2.94 2024-12-06 20:02:45,302 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.1 pTM=0.589 ipTM=0.191 tol=4.48 2024-12-06 20:03:09,989 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.8 pTM=0.589 ipTM=0.194 tol=8.68 2024-12-06 20:03:34,682 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.9 pTM=0.592 ipTM=0.193 tol=4.15 2024-12-06 20:03:59,357 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.1 pTM=0.591 ipTM=0.2 tol=3.15 2024-12-06 20:04:24,036 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70 pTM=0.591 ipTM=0.199 tol=2.43 2024-12-06 20:04:48,711 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70 pTM=0.594 ipTM=0.21 tol=2.28 2024-12-06 20:05:13,366 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.8 pTM=0.59 ipTM=0.207 tol=1.39 2024-12-06 20:05:38,052 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.2 pTM=0.595 ipTM=0.215 tol=1.37 2024-12-06 20:06:02,718 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.2 pTM=0.593 ipTM=0.207 tol=1.64 2024-12-06 20:06:27,421 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=70.3 pTM=0.595 ipTM=0.217 tol=2.35 2024-12-06 20:06:52,089 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.2 pTM=0.595 ipTM=0.214 tol=2.93 2024-12-06 20:07:16,771 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.2 pTM=0.596 ipTM=0.226 tol=1.47 2024-12-06 20:07:41,439 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.3 pTM=0.593 ipTM=0.217 tol=1.14 2024-12-06 20:08:06,118 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.4 pTM=0.594 ipTM=0.218 tol=1.07 2024-12-06 20:08:30,798 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.6 pTM=0.594 ipTM=0.216 tol=3.48 2024-12-06 20:08:55,456 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.2 pTM=0.594 ipTM=0.22 tol=1.21 2024-12-06 20:09:20,111 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.4 pTM=0.595 ipTM=0.218 tol=3.32 2024-12-06 20:09:44,770 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.4 pTM=0.596 ipTM=0.232 tol=3.63 2024-12-06 20:10:09,481 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.3 pTM=0.596 ipTM=0.224 tol=2.02 2024-12-06 20:10:34,157 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.5 pTM=0.599 ipTM=0.234 tol=2.37 2024-12-06 20:10:58,855 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.6 pTM=0.594 ipTM=0.228 tol=2.85 2024-12-06 20:11:23,568 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.4 pTM=0.598 ipTM=0.234 tol=1.89 2024-12-06 20:11:23,569 alphafold2_multimer_v3_model_1_seed_000 took 960.8s (30 recycles) 2024-12-06 20:11:49,048 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.7 pTM=0.591 ipTM=0.174 2024-12-06 20:12:13,759 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.6 pTM=0.598 ipTM=0.197 tol=5.36 2024-12-06 20:12:38,496 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.2 pTM=0.595 ipTM=0.215 tol=3.98 2024-12-06 20:13:03,247 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.1 pTM=0.596 ipTM=0.21 tol=3.96 2024-12-06 20:13:28,001 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.9 pTM=0.594 ipTM=0.205 tol=2.25 2024-12-06 20:13:52,756 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.1 pTM=0.599 ipTM=0.22 tol=2.87 2024-12-06 20:14:17,504 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.2 pTM=0.6 ipTM=0.224 tol=1.79 2024-12-06 20:14:42,267 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.1 pTM=0.596 ipTM=0.218 tol=1.71 2024-12-06 20:15:07,029 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=72.3 pTM=0.602 ipTM=0.227 tol=2.57 2024-12-06 20:15:31,791 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=72.6 pTM=0.603 ipTM=0.238 tol=3.12 2024-12-06 20:15:56,536 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.4 pTM=0.603 ipTM=0.237 tol=1.59 2024-12-06 20:16:21,268 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.1 pTM=0.601 ipTM=0.231 tol=2.43 2024-12-06 20:16:46,007 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.2 pTM=0.603 ipTM=0.242 tol=2.46 2024-12-06 20:17:10,723 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.2 pTM=0.602 ipTM=0.239 tol=1.62 2024-12-06 20:17:35,445 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.2 pTM=0.601 ipTM=0.234 tol=2.52 2024-12-06 20:18:00,150 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72 pTM=0.601 ipTM=0.234 tol=3.53 2024-12-06 20:18:24,865 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.4 pTM=0.601 ipTM=0.235 tol=3.01 2024-12-06 20:18:49,589 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.4 pTM=0.602 ipTM=0.235 tol=1.77 2024-12-06 20:19:14,320 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.3 pTM=0.602 ipTM=0.233 tol=2.45 2024-12-06 20:19:39,036 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.5 pTM=0.603 ipTM=0.233 tol=0.968 2024-12-06 20:20:03,746 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.4 pTM=0.601 ipTM=0.237 tol=1.48 2024-12-06 20:20:28,462 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.4 pTM=0.601 ipTM=0.229 tol=2.14 2024-12-06 20:20:53,162 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.6 pTM=0.604 ipTM=0.24 tol=1.19 2024-12-06 20:21:17,849 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.4 pTM=0.602 ipTM=0.233 tol=0.915 2024-12-06 20:21:42,529 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=72.3 pTM=0.603 ipTM=0.238 tol=1.17 2024-12-06 20:22:07,237 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.4 pTM=0.605 ipTM=0.243 tol=2.15 2024-12-06 20:22:31,928 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.2 pTM=0.603 ipTM=0.243 tol=1.23 2024-12-06 20:22:56,610 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72 pTM=0.601 ipTM=0.231 tol=1.62 2024-12-06 20:23:21,285 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.2 pTM=0.604 ipTM=0.244 tol=1.19 2024-12-06 20:23:45,974 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.4 pTM=0.603 ipTM=0.241 tol=1.97 2024-12-06 20:24:10,670 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.4 pTM=0.605 ipTM=0.244 tol=0.881 2024-12-06 20:24:10,671 alphafold2_multimer_v3_model_2_seed_000 took 766.4s (30 recycles) 2024-12-06 20:24:36,203 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=71.8 pTM=0.588 ipTM=0.328 2024-12-06 20:25:01,113 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.9 pTM=0.608 ipTM=0.416 tol=8.73 2024-12-06 20:25:26,026 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.3 pTM=0.604 ipTM=0.404 tol=4.96 2024-12-06 20:25:50,938 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.9 pTM=0.607 ipTM=0.406 tol=4.6 2024-12-06 20:26:15,846 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.9 pTM=0.61 ipTM=0.417 tol=3.33 2024-12-06 20:26:40,679 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71 pTM=0.613 ipTM=0.418 tol=3.47 2024-12-06 20:27:05,520 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.2 pTM=0.612 ipTM=0.425 tol=2.93 2024-12-06 20:27:30,321 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.1 pTM=0.61 ipTM=0.417 tol=1.7 2024-12-06 20:27:55,135 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.5 pTM=0.611 ipTM=0.416 tol=3.2 2024-12-06 20:28:19,969 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.3 pTM=0.611 ipTM=0.415 tol=2.25 2024-12-06 20:28:44,837 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.6 pTM=0.611 ipTM=0.423 tol=2.22 2024-12-06 20:29:09,648 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.2 pTM=0.612 ipTM=0.421 tol=2.76 2024-12-06 20:29:34,440 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.2 pTM=0.609 ipTM=0.424 tol=3.38 2024-12-06 20:29:59,241 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.4 pTM=0.611 ipTM=0.423 tol=2.76 2024-12-06 20:30:24,046 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.7 pTM=0.61 ipTM=0.416 tol=1.38 2024-12-06 20:30:48,906 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.3 pTM=0.61 ipTM=0.419 tol=3.35 2024-12-06 20:31:13,710 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.4 pTM=0.607 ipTM=0.424 tol=2.04 2024-12-06 20:31:38,502 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.3 pTM=0.609 ipTM=0.429 tol=2.37 2024-12-06 20:32:03,282 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.4 pTM=0.61 ipTM=0.433 tol=2.38 2024-12-06 20:32:28,091 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.6 pTM=0.612 ipTM=0.422 tol=1.21 2024-12-06 20:32:52,943 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.3 pTM=0.609 ipTM=0.423 tol=1.28 2024-12-06 20:33:17,721 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.3 pTM=0.609 ipTM=0.426 tol=0.572 2024-12-06 20:33:42,503 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.5 pTM=0.608 ipTM=0.42 tol=0.79 2024-12-06 20:34:07,289 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.6 pTM=0.611 ipTM=0.431 tol=2.89 2024-12-06 20:34:32,121 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.5 pTM=0.609 ipTM=0.431 tol=1.58 2024-12-06 20:34:56,916 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.2 pTM=0.61 ipTM=0.418 tol=0.68 2024-12-06 20:35:21,683 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.4 pTM=0.608 ipTM=0.409 tol=2.94 2024-12-06 20:35:46,436 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.9 pTM=0.608 ipTM=0.422 tol=2.29 2024-12-06 20:36:11,242 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.2 pTM=0.608 ipTM=0.425 tol=1.7 2024-12-06 20:36:36,031 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.2 pTM=0.608 ipTM=0.431 tol=0.864 2024-12-06 20:37:00,834 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.4 pTM=0.609 ipTM=0.429 tol=1.35 2024-12-06 20:37:00,835 alphafold2_multimer_v3_model_3_seed_000 took 769.4s (30 recycles) 2024-12-06 20:37:26,457 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.2 pTM=0.601 ipTM=0.372 2024-12-06 20:37:51,328 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72.8 pTM=0.595 ipTM=0.392 tol=12.7 2024-12-06 20:38:16,203 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.1 pTM=0.586 ipTM=0.423 tol=8.11 2024-12-06 20:38:41,064 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.9 pTM=0.587 ipTM=0.409 tol=4.71 2024-12-06 20:39:05,928 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.3 pTM=0.587 ipTM=0.443 tol=2.68 2024-12-06 20:39:30,767 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72 pTM=0.588 ipTM=0.448 tol=2.18 2024-12-06 20:39:55,644 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.5 pTM=0.588 ipTM=0.462 tol=3.37 2024-12-06 20:40:20,482 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.2 pTM=0.588 ipTM=0.456 tol=2.75 2024-12-06 20:40:45,341 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=72.7 pTM=0.588 ipTM=0.463 tol=4.05 2024-12-06 20:41:10,185 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.3 pTM=0.588 ipTM=0.452 tol=3.37 2024-12-06 20:41:35,028 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.7 pTM=0.589 ipTM=0.466 tol=3.82 2024-12-06 20:41:59,861 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.2 pTM=0.589 ipTM=0.456 tol=3.67 2024-12-06 20:42:24,700 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.6 pTM=0.588 ipTM=0.46 tol=3.39 2024-12-06 20:42:49,543 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.2 pTM=0.591 ipTM=0.463 tol=3.83 2024-12-06 20:43:14,413 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.9 pTM=0.592 ipTM=0.47 tol=4.36 2024-12-06 20:43:39,255 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.2 pTM=0.59 ipTM=0.455 tol=4.31 2024-12-06 20:44:04,116 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.9 pTM=0.589 ipTM=0.463 tol=3.35 2024-12-06 20:44:28,972 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.4 pTM=0.591 ipTM=0.469 tol=3.42 2024-12-06 20:44:53,856 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73 pTM=0.591 ipTM=0.471 tol=3.41 2024-12-06 20:45:18,713 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.4 pTM=0.59 ipTM=0.456 tol=3.31 2024-12-06 20:45:43,567 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.9 pTM=0.589 ipTM=0.454 tol=3.09 2024-12-06 20:46:08,405 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.6 pTM=0.591 ipTM=0.47 tol=2.56 2024-12-06 20:46:33,258 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.9 pTM=0.589 ipTM=0.463 tol=2.22 2024-12-06 20:46:58,107 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.8 pTM=0.587 ipTM=0.453 tol=2.85 2024-12-06 20:47:22,954 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.4 pTM=0.591 ipTM=0.458 tol=3.57 2024-12-06 20:47:47,808 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.4 pTM=0.586 ipTM=0.446 tol=2.01 2024-12-06 20:48:12,649 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.2 pTM=0.588 ipTM=0.451 tol=2.93 2024-12-06 20:48:37,473 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=72.6 pTM=0.587 ipTM=0.457 tol=2.32 2024-12-06 20:49:02,323 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.3 pTM=0.591 ipTM=0.462 tol=2.59 2024-12-06 20:49:27,178 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=73.1 pTM=0.589 ipTM=0.466 tol=2.98 2024-12-06 20:49:52,049 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.5 pTM=0.593 ipTM=0.462 tol=2.63 2024-12-06 20:49:52,050 alphafold2_multimer_v3_model_4_seed_000 took 770.5s (30 recycles) 2024-12-06 20:50:17,685 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.6 pTM=0.579 ipTM=0.184 2024-12-06 20:50:42,588 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.4 pTM=0.594 ipTM=0.39 tol=6.21 2024-12-06 20:51:07,477 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.7 pTM=0.591 ipTM=0.446 tol=6.49 2024-12-06 20:51:32,380 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.4 pTM=0.593 ipTM=0.458 tol=4.05 2024-12-06 20:51:57,298 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.6 pTM=0.593 ipTM=0.471 tol=2.02 2024-12-06 20:52:22,196 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=71.7 pTM=0.594 ipTM=0.468 tol=3.12 2024-12-06 20:52:47,111 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.2 pTM=0.596 ipTM=0.479 tol=1.49 2024-12-06 20:53:11,976 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.2 pTM=0.595 ipTM=0.477 tol=2.87 2024-12-06 20:53:36,890 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72 pTM=0.597 ipTM=0.475 tol=2.67 2024-12-06 20:54:01,782 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.9 pTM=0.597 ipTM=0.475 tol=2.26 2024-12-06 20:54:26,671 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72 pTM=0.599 ipTM=0.484 tol=1.62 2024-12-06 20:54:51,570 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.9 pTM=0.6 ipTM=0.483 tol=2.98 2024-12-06 20:55:16,482 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.8 pTM=0.599 ipTM=0.477 tol=3.07 2024-12-06 20:55:41,404 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.8 pTM=0.6 ipTM=0.478 tol=2.3 2024-12-06 20:56:06,287 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72 pTM=0.601 ipTM=0.481 tol=3.24 2024-12-06 20:56:31,180 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.9 pTM=0.604 ipTM=0.478 tol=1.23 2024-12-06 20:56:56,039 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72 pTM=0.603 ipTM=0.476 tol=2.74 2024-12-06 20:57:20,883 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.2 pTM=0.603 ipTM=0.489 tol=2.33 2024-12-06 20:57:45,734 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72 pTM=0.603 ipTM=0.49 tol=1.34 2024-12-06 20:58:10,625 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.2 pTM=0.605 ipTM=0.484 tol=1.48 2024-12-06 20:58:35,543 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.1 pTM=0.603 ipTM=0.479 tol=2.69 2024-12-06 20:59:00,438 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.1 pTM=0.603 ipTM=0.495 tol=1.93 2024-12-06 20:59:25,328 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.1 pTM=0.601 ipTM=0.485 tol=2.51 2024-12-06 20:59:50,216 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.1 pTM=0.601 ipTM=0.485 tol=1.88 2024-12-06 21:00:15,102 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.2 pTM=0.601 ipTM=0.492 tol=2.89 2024-12-06 21:00:39,992 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.1 pTM=0.601 ipTM=0.479 tol=2.34 2024-12-06 21:01:04,839 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72 pTM=0.6 ipTM=0.469 tol=2.11 2024-12-06 21:01:29,715 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.8 pTM=0.602 ipTM=0.477 tol=1.94 2024-12-06 21:01:54,612 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.8 pTM=0.601 ipTM=0.473 tol=1.13 2024-12-06 21:02:19,473 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.1 pTM=0.6 ipTM=0.482 tol=1.73 2024-12-06 21:02:44,327 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.1 pTM=0.603 ipTM=0.479 tol=2.68 2024-12-06 21:02:44,328 alphafold2_multimer_v3_model_5_seed_000 took 771.5s (30 recycles) 2024-12-06 21:02:45,058 reranking models by 'multimer' metric 2024-12-06 21:02:46,397 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 21:04:30,953 Relaxation took 105.9s 2024-12-06 21:04:30,953 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.1 pTM=0.603 ipTM=0.479 2024-12-06 21:06:46,510 Relaxation took 135.6s 2024-12-06 21:06:46,510 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.5 pTM=0.593 ipTM=0.462 2024-12-06 21:08:27,266 Relaxation took 100.8s 2024-12-06 21:08:27,266 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.4 pTM=0.609 ipTM=0.429 2024-12-06 21:09:58,535 Relaxation took 91.3s 2024-12-06 21:09:58,535 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.4 pTM=0.605 ipTM=0.244 2024-12-06 21:11:28,839 Relaxation took 90.3s 2024-12-06 21:11:28,839 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.4 pTM=0.598 ipTM=0.234 2024-12-06 21:11:30,900 Done