2024-12-06 20:13:51,293 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 20:13:51,606 Running on GPU
2024-12-06 20:13:55,304 Found 6 citations for tools or databases
2024-12-06 20:13:55,305 Query 1/1: KLHL1_NUDCD3 (length 1109)
2024-12-06 20:13:55,613 Sleeping for 9s. Reason: PENDING
2024-12-06 20:14:04,871 Sleeping for 6s. Reason: RUNNING
2024-12-06 20:14:11,130 Sleeping for 9s. Reason: RUNNING
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2024-12-06 20:15:05,979 Sleeping for 7s. Reason: RUNNING
2024-12-06 20:15:13,238 Sleeping for 8s. Reason: RUNNING
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2024-12-06 20:15:31,763 Sleeping for 10s. Reason: RUNNING
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2024-12-06 20:15:59,557 Sleeping for 6s. Reason: RUNNING
2024-12-06 20:16:05,814 Sleeping for 8s. Reason: RUNNING
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2024-12-06 20:16:24,340 Sleeping for 6s. Reason: RUNNING
2024-12-06 20:16:32,296 Sleeping for 9s. Reason: PENDING
2024-12-06 20:16:41,552 Sleeping for 8s. Reason: RUNNING
2024-12-06 20:16:49,816 Sleeping for 6s. Reason: RUNNING
2024-12-06 20:16:56,068 Sleeping for 10s. Reason: RUNNING
2024-12-06 20:17:06,331 Sleeping for 8s. Reason: RUNNING
2024-12-06 20:17:14,589 Sleeping for 5s. Reason: RUNNING
2024-12-06 20:17:19,848 Sleeping for 8s. Reason: RUNNING
2024-12-06 20:17:28,101 Sleeping for 8s. Reason: RUNNING
2024-12-06 20:17:36,356 Sleeping for 9s. Reason: RUNNING
2024-12-06 20:17:45,620 Sleeping for 8s. Reason: RUNNING
2024-12-06 20:17:53,883 Sleeping for 10s. Reason: RUNNING
2024-12-06 20:18:04,145 Sleeping for 8s. Reason: RUNNING
2024-12-06 20:18:12,404 Sleeping for 9s. Reason: RUNNING
2024-12-06 20:18:21,665 Sleeping for 9s. Reason: RUNNING
2024-12-06 20:18:30,920 Sleeping for 5s. Reason: RUNNING
2024-12-06 20:18:36,173 Sleeping for 8s. Reason: RUNNING
2024-12-06 20:18:49,325 Setting max_seq=508, max_extra_seq=2048
2024-12-06 20:22:03,322 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.2 pTM=0.527 ipTM=0.197
2024-12-06 20:22:31,354 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.1 pTM=0.525 ipTM=0.17 tol=10.4
2024-12-06 20:22:59,524 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.8 pTM=0.531 ipTM=0.193 tol=18.5
2024-12-06 20:23:27,856 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.8 pTM=0.528 ipTM=0.173 tol=10.3
2024-12-06 20:23:56,294 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.7 pTM=0.531 ipTM=0.202 tol=6.16
2024-12-06 20:24:24,773 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.2 pTM=0.532 ipTM=0.19 tol=14
2024-12-06 20:24:53,285 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.8 pTM=0.535 ipTM=0.207 tol=14.4
2024-12-06 20:25:21,824 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.2 pTM=0.536 ipTM=0.203 tol=6.31
2024-12-06 20:25:50,333 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.5 pTM=0.554 ipTM=0.305 tol=5.43
2024-12-06 20:26:18,865 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.9 pTM=0.557 ipTM=0.335 tol=11.4
2024-12-06 20:26:47,427 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.5 pTM=0.555 ipTM=0.33 tol=11
2024-12-06 20:27:16,009 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69 pTM=0.563 ipTM=0.352 tol=2.93
2024-12-06 20:27:44,544 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.6 pTM=0.557 ipTM=0.326 tol=1.51
2024-12-06 20:28:13,055 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.1 pTM=0.562 ipTM=0.348 tol=4.93
2024-12-06 20:28:41,548 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.8 pTM=0.56 ipTM=0.333 tol=4.38
2024-12-06 20:29:10,060 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.9 pTM=0.56 ipTM=0.341 tol=13
2024-12-06 20:29:38,543 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.5 pTM=0.559 ipTM=0.337 tol=12.4
2024-12-06 20:30:07,015 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.1 pTM=0.563 ipTM=0.35 tol=7.93
2024-12-06 20:30:35,471 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.4 pTM=0.556 ipTM=0.33 tol=10
2024-12-06 20:31:03,881 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.9 pTM=0.564 ipTM=0.346 tol=2.42
2024-12-06 20:31:32,271 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.1 pTM=0.551 ipTM=0.296 tol=3.84
2024-12-06 20:32:00,692 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.8 pTM=0.56 ipTM=0.33 tol=4.63
2024-12-06 20:32:29,114 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.4 pTM=0.555 ipTM=0.323 tol=3.64
2024-12-06 20:32:57,512 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.8 pTM=0.556 ipTM=0.332 tol=6.01
2024-12-06 20:33:25,986 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.4 pTM=0.555 ipTM=0.32 tol=4.51
2024-12-06 20:33:54,470 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.9 pTM=0.559 ipTM=0.337 tol=11.8
2024-12-06 20:34:22,961 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.7 pTM=0.559 ipTM=0.33 tol=9.38
2024-12-06 20:34:51,463 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.9 pTM=0.56 ipTM=0.345 tol=9.34
2024-12-06 20:35:19,948 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.9 pTM=0.563 ipTM=0.34 tol=9.44
2024-12-06 20:35:48,464 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69 pTM=0.567 ipTM=0.366 tol=10.4
2024-12-06 20:36:16,997 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.8 pTM=0.565 ipTM=0.345 tol=11.2
2024-12-06 20:36:16,998 alphafold2_multimer_v3_model_1_seed_000 took 1042.8s (30 recycles)
2024-12-06 20:36:46,344 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.7 pTM=0.528 ipTM=0.193
2024-12-06 20:37:14,909 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68 pTM=0.533 ipTM=0.176 tol=13
2024-12-06 20:37:43,463 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.4 pTM=0.528 ipTM=0.17 tol=8.12
2024-12-06 20:38:12,012 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.6 pTM=0.529 ipTM=0.171 tol=5.17
2024-12-06 20:38:40,515 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.6 pTM=0.532 ipTM=0.185 tol=7.15
2024-12-06 20:39:09,046 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.8 pTM=0.536 ipTM=0.192 tol=5.05
2024-12-06 20:39:37,610 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.8 pTM=0.532 ipTM=0.186 tol=4.73
2024-12-06 20:40:06,147 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.8 pTM=0.53 ipTM=0.183 tol=3.68
2024-12-06 20:40:34,684 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.6 pTM=0.528 ipTM=0.18 tol=3.22
2024-12-06 20:41:03,229 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.6 pTM=0.531 ipTM=0.184 tol=2.66
2024-12-06 20:41:31,804 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.4 pTM=0.529 ipTM=0.186 tol=3.57
2024-12-06 20:42:00,353 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.8 pTM=0.532 ipTM=0.188 tol=4.11
2024-12-06 20:42:28,881 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.7 pTM=0.531 ipTM=0.191 tol=3.68
2024-12-06 20:42:57,397 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.7 pTM=0.529 ipTM=0.184 tol=2.26
2024-12-06 20:43:25,935 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.5 pTM=0.527 ipTM=0.177 tol=2.68
2024-12-06 20:43:54,478 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.4 pTM=0.53 ipTM=0.184 tol=2.7
2024-12-06 20:44:22,999 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.3 pTM=0.525 ipTM=0.178 tol=2.56
2024-12-06 20:44:51,583 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.6 pTM=0.531 ipTM=0.187 tol=2.08
2024-12-06 20:45:20,165 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.5 pTM=0.528 ipTM=0.182 tol=1.83
2024-12-06 20:45:48,750 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.5 pTM=0.529 ipTM=0.182 tol=1.69
2024-12-06 20:46:17,369 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.6 pTM=0.532 ipTM=0.191 tol=1.67
2024-12-06 20:46:45,979 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.8 pTM=0.535 ipTM=0.198 tol=2.21
2024-12-06 20:47:14,580 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.7 pTM=0.532 ipTM=0.192 tol=1.75
2024-12-06 20:47:43,152 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.5 pTM=0.529 ipTM=0.188 tol=2.56
2024-12-06 20:48:11,702 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.6 pTM=0.53 ipTM=0.189 tol=1.61
2024-12-06 20:48:40,214 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.6 pTM=0.53 ipTM=0.188 tol=1.57
2024-12-06 20:49:08,696 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.6 pTM=0.527 ipTM=0.185 tol=1.96
2024-12-06 20:49:37,157 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.6 pTM=0.53 ipTM=0.191 tol=1.73
2024-12-06 20:50:05,601 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.7 pTM=0.534 ipTM=0.202 tol=1.38
2024-12-06 20:50:34,047 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.7 pTM=0.533 ipTM=0.193 tol=1.66
2024-12-06 20:51:02,516 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.6 pTM=0.534 ipTM=0.192 tol=1.63
2024-12-06 20:51:02,517 alphafold2_multimer_v3_model_2_seed_000 took 884.8s (30 recycles)
2024-12-06 20:51:31,692 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.8 pTM=0.592 ipTM=0.443
2024-12-06 20:52:00,220 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69 pTM=0.551 ipTM=0.247 tol=14.6
2024-12-06 20:52:28,770 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69 pTM=0.543 ipTM=0.234 tol=11.7
2024-12-06 20:52:57,379 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.4 pTM=0.539 ipTM=0.205 tol=10.3
2024-12-06 20:53:26,003 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=69 pTM=0.538 ipTM=0.205 tol=7.49
2024-12-06 20:53:54,607 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.5 pTM=0.55 ipTM=0.271 tol=9.6
2024-12-06 20:54:23,175 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.7 pTM=0.561 ipTM=0.34 tol=10.3
2024-12-06 20:54:51,774 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.4 pTM=0.544 ipTM=0.234 tol=5.03
2024-12-06 20:55:20,356 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.9 pTM=0.539 ipTM=0.195 tol=7.19
2024-12-06 20:55:48,924 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.4 pTM=0.559 ipTM=0.34 tol=6.17
2024-12-06 20:56:17,490 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.2 pTM=0.57 ipTM=0.378 tol=10.9
2024-12-06 20:56:46,028 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.1 pTM=0.559 ipTM=0.295 tol=6.5
2024-12-06 20:57:14,591 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.8 pTM=0.542 ipTM=0.209 tol=4.73
2024-12-06 20:57:43,140 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.3 pTM=0.571 ipTM=0.375 tol=5.98
2024-12-06 20:58:11,698 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.2 pTM=0.574 ipTM=0.38 tol=4.29
2024-12-06 20:58:40,217 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.6 pTM=0.551 ipTM=0.254 tol=6.49
2024-12-06 20:59:08,773 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68 pTM=0.54 ipTM=0.202 tol=3.25
2024-12-06 20:59:37,336 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.4 pTM=0.565 ipTM=0.338 tol=6.48
2024-12-06 21:00:05,913 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.6 pTM=0.567 ipTM=0.348 tol=2.13
2024-12-06 21:00:34,517 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.9 pTM=0.548 ipTM=0.242 tol=2.07
2024-12-06 21:01:03,117 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.7 pTM=0.551 ipTM=0.256 tol=1.65
2024-12-06 21:01:31,715 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.9 pTM=0.553 ipTM=0.262 tol=2.71
2024-12-06 21:02:00,331 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.3 pTM=0.566 ipTM=0.343 tol=1.79
2024-12-06 21:02:28,922 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.1 pTM=0.556 ipTM=0.284 tol=1.17
2024-12-06 21:02:57,577 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.8 pTM=0.552 ipTM=0.273 tol=1.94
2024-12-06 21:03:26,242 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.9 pTM=0.551 ipTM=0.253 tol=1.71
2024-12-06 21:03:54,935 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.1 pTM=0.561 ipTM=0.317 tol=1.55
2024-12-06 21:04:23,562 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.2 pTM=0.561 ipTM=0.323 tol=1.46
2024-12-06 21:04:52,179 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68.4 pTM=0.566 ipTM=0.344 tol=1.89
2024-12-06 21:05:20,796 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68 pTM=0.553 ipTM=0.274 tol=2.24
2024-12-06 21:05:49,398 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=68.2 pTM=0.562 ipTM=0.322 tol=1.92
2024-12-06 21:05:49,399 alphafold2_multimer_v3_model_3_seed_000 took 886.1s (30 recycles)
2024-12-06 21:06:18,681 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.5 pTM=0.534 ipTM=0.185
2024-12-06 21:06:47,270 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.7 pTM=0.536 ipTM=0.196 tol=16.5
2024-12-06 21:07:15,843 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.2 pTM=0.531 ipTM=0.162 tol=17.5
2024-12-06 21:07:44,380 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67 pTM=0.545 ipTM=0.213 tol=5.86
2024-12-06 21:08:12,919 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.5 pTM=0.544 ipTM=0.221 tol=2.76
2024-12-06 21:08:41,459 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.2 pTM=0.567 ipTM=0.33 tol=4
2024-12-06 21:09:10,007 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.5 pTM=0.566 ipTM=0.332 tol=1.95
2024-12-06 21:09:38,590 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.6 pTM=0.569 ipTM=0.345 tol=3.59
2024-12-06 21:10:07,155 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.8 pTM=0.571 ipTM=0.353 tol=3.03
2024-12-06 21:10:35,682 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.6 pTM=0.571 ipTM=0.361 tol=1.61
2024-12-06 21:11:04,250 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.6 pTM=0.549 ipTM=0.224 tol=2.55
2024-12-06 21:11:32,794 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.4 pTM=0.546 ipTM=0.208 tol=2.36
2024-12-06 21:12:01,345 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.9 pTM=0.551 ipTM=0.242 tol=2.64
2024-12-06 21:12:29,870 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67.4 pTM=0.567 ipTM=0.329 tol=3.23
2024-12-06 21:12:58,423 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.9 pTM=0.551 ipTM=0.246 tol=2.38
2024-12-06 21:13:26,901 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.7 pTM=0.552 ipTM=0.253 tol=3.67
2024-12-06 21:13:55,388 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.7 pTM=0.554 ipTM=0.273 tol=1.82
2024-12-06 21:14:23,823 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67.3 pTM=0.567 ipTM=0.332 tol=1.86
2024-12-06 21:14:52,298 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.7 pTM=0.55 ipTM=0.254 tol=2.74
2024-12-06 21:15:20,803 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.3 pTM=0.564 ipTM=0.309 tol=3.15
2024-12-06 21:15:49,318 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.9 pTM=0.555 ipTM=0.281 tol=2.65
2024-12-06 21:16:17,866 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.4 pTM=0.568 ipTM=0.33 tol=2.41
2024-12-06 21:16:46,450 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.8 pTM=0.549 ipTM=0.216 tol=4.11
2024-12-06 21:17:15,021 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66 pTM=0.537 ipTM=0.172 tol=2.69
2024-12-06 21:17:43,557 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.9 pTM=0.542 ipTM=0.19 tol=6.77
2024-12-06 21:18:12,094 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.7 pTM=0.553 ipTM=0.244 tol=5.45
2024-12-06 21:18:40,603 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.9 pTM=0.559 ipTM=0.292 tol=4.98
2024-12-06 21:19:09,133 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.1 pTM=0.561 ipTM=0.301 tol=3.35
2024-12-06 21:19:37,694 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.6 pTM=0.574 ipTM=0.366 tol=2.46
2024-12-06 21:20:06,223 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.2 pTM=0.564 ipTM=0.328 tol=2.11
2024-12-06 21:20:34,772 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.9 pTM=0.576 ipTM=0.371 tol=2.36
2024-12-06 21:20:34,773 alphafold2_multimer_v3_model_4_seed_000 took 884.6s (30 recycles)
2024-12-06 21:21:04,065 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.9 pTM=0.535 ipTM=0.206
2024-12-06 21:21:32,704 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.1 pTM=0.534 ipTM=0.166 tol=12.1
2024-12-06 21:22:01,328 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.2 pTM=0.535 ipTM=0.172 tol=4.11
2024-12-06 21:22:29,935 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.4 pTM=0.538 ipTM=0.177 tol=5.69
2024-12-06 21:22:58,572 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68 pTM=0.535 ipTM=0.17 tol=4.86
2024-12-06 21:23:27,232 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68 pTM=0.533 ipTM=0.163 tol=3.54
2024-12-06 21:23:55,905 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.2 pTM=0.532 ipTM=0.16 tol=2.54
2024-12-06 21:24:24,595 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.2 pTM=0.532 ipTM=0.16 tol=5.35
2024-12-06 21:24:53,273 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.2 pTM=0.532 ipTM=0.16 tol=4.73
2024-12-06 21:25:21,926 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.1 pTM=0.529 ipTM=0.159 tol=3.61
2024-12-06 21:25:50,581 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.2 pTM=0.531 ipTM=0.162 tol=3.04
2024-12-06 21:26:19,247 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.3 pTM=0.53 ipTM=0.158 tol=2.62
2024-12-06 21:26:47,911 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.2 pTM=0.531 ipTM=0.163 tol=4.27
2024-12-06 21:27:16,586 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.5 pTM=0.531 ipTM=0.167 tol=1.33
2024-12-06 21:27:45,263 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.3 pTM=0.537 ipTM=0.189 tol=3.07
2024-12-06 21:28:13,934 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.2 pTM=0.538 ipTM=0.208 tol=3.19
2024-12-06 21:28:42,605 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.7 pTM=0.549 ipTM=0.267 tol=1.8
2024-12-06 21:29:11,223 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.6 pTM=0.548 ipTM=0.266 tol=1.16
2024-12-06 21:29:39,809 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.8 pTM=0.55 ipTM=0.258 tol=3.09
2024-12-06 21:30:08,377 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.8 pTM=0.548 ipTM=0.263 tol=3.51
2024-12-06 21:30:36,900 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.8 pTM=0.548 ipTM=0.256 tol=2.22
2024-12-06 21:31:05,428 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.6 pTM=0.547 ipTM=0.257 tol=2.01
2024-12-06 21:31:33,945 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.8 pTM=0.55 ipTM=0.267 tol=3.09
2024-12-06 21:32:02,482 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.6 pTM=0.542 ipTM=0.197 tol=3.62
2024-12-06 21:32:31,047 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68 pTM=0.527 ipTM=0.156 tol=4.43
2024-12-06 21:32:59,597 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.2 pTM=0.533 ipTM=0.17 tol=3.36
2024-12-06 21:33:28,080 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.7 pTM=0.555 ipTM=0.302 tol=3.25
2024-12-06 21:33:56,539 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.6 pTM=0.554 ipTM=0.299 tol=3.27
2024-12-06 21:34:25,045 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.9 pTM=0.559 ipTM=0.319 tol=3.43
2024-12-06 21:34:53,548 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.7 pTM=0.554 ipTM=0.301 tol=1.53
2024-12-06 21:35:22,102 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.8 pTM=0.55 ipTM=0.256 tol=3.26
2024-12-06 21:35:22,103 alphafold2_multimer_v3_model_5_seed_000 took 886.6s (30 recycles)
2024-12-06 21:35:22,855 reranking models by 'multimer' metric
2024-12-06 21:35:23,918 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 21:36:53,784 Relaxation took 90.9s
2024-12-06 21:36:53,784 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.9 pTM=0.576 ipTM=0.371
2024-12-06 21:38:13,855 Relaxation took 80.1s
2024-12-06 21:38:13,855 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.8 pTM=0.565 ipTM=0.345
2024-12-06 21:39:54,166 Relaxation took 100.3s
2024-12-06 21:39:54,166 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=68.2 pTM=0.562 ipTM=0.322
2024-12-06 21:41:19,326 Relaxation took 85.2s
2024-12-06 21:41:19,326 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.8 pTM=0.55 ipTM=0.256
2024-12-06 21:43:50,493 Relaxation took 151.2s
2024-12-06 21:43:50,494 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.6 pTM=0.534 ipTM=0.192
2024-12-06 21:43:52,679 Done