2024-12-06 20:33:03,140 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 20:33:03,452 Running on GPU 2024-12-06 20:33:07,088 Found 6 citations for tools or databases 2024-12-06 20:33:07,088 Query 1/1: KLHL20_GFER (length 814) 2024-12-06 20:33:07,380 Sleeping for 7s. Reason: PENDING 2024-12-06 20:33:14,634 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:33:22,892 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:33:29,143 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:33:38,399 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:33:43,660 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:33:49,919 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:34:00,183 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:34:09,592 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:34:16,853 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:34:22,112 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:34:31,392 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:34:41,683 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:34:50,962 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:34:56,220 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:35:06,483 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:35:12,747 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:35:19,004 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:35:26,266 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:35:31,523 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:35:40,786 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:35:50,052 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:35:59,305 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:36:08,565 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:36:21,270 Sleeping for 5s. Reason: PENDING 2024-12-06 20:36:26,526 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:36:36,785 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:36:44,041 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:36:53,302 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:37:00,560 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:37:06,820 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:37:12,075 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:37:22,345 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:37:27,599 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:37:35,862 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:37:44,116 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:37:51,383 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:37:59,641 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:38:06,897 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:38:18,756 Setting max_seq=508, max_extra_seq=2048 2024-12-06 20:40:58,208 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=79.2 pTM=0.436 ipTM=0.161 2024-12-06 20:41:11,730 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=78.8 pTM=0.44 ipTM=0.158 tol=11.7 2024-12-06 20:41:25,280 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=78.6 pTM=0.449 ipTM=0.195 tol=17.3 2024-12-06 20:41:38,831 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78.1 pTM=0.445 ipTM=0.196 tol=3.98 2024-12-06 20:41:52,413 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78.4 pTM=0.447 ipTM=0.197 tol=3.88 2024-12-06 20:42:06,003 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=78.5 pTM=0.446 ipTM=0.191 tol=3.49 2024-12-06 20:42:19,588 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78.5 pTM=0.444 ipTM=0.182 tol=3.51 2024-12-06 20:42:33,204 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=78.3 pTM=0.444 ipTM=0.175 tol=2.37 2024-12-06 20:42:46,810 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=78.6 pTM=0.441 ipTM=0.17 tol=8.49 2024-12-06 20:43:00,437 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=78.1 pTM=0.441 ipTM=0.164 tol=7.06 2024-12-06 20:43:14,079 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=78.7 pTM=0.441 ipTM=0.17 tol=8.09 2024-12-06 20:43:27,729 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.9 pTM=0.439 ipTM=0.167 tol=7.09 2024-12-06 20:43:41,387 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=79 pTM=0.44 ipTM=0.166 tol=4.17 2024-12-06 20:43:55,028 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=78.6 pTM=0.443 ipTM=0.167 tol=3.87 2024-12-06 20:44:08,652 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78.6 pTM=0.445 ipTM=0.169 tol=3.99 2024-12-06 20:44:22,281 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=77.9 pTM=0.448 ipTM=0.168 tol=3.76 2024-12-06 20:44:35,932 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=77.7 pTM=0.44 ipTM=0.161 tol=9.7 2024-12-06 20:44:49,607 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=78.1 pTM=0.443 ipTM=0.167 tol=5.59 2024-12-06 20:45:03,272 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.9 pTM=0.442 ipTM=0.179 tol=6.61 2024-12-06 20:45:16,919 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=78.4 pTM=0.447 ipTM=0.192 tol=10.1 2024-12-06 20:45:30,572 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=78.1 pTM=0.449 ipTM=0.181 tol=2.79 2024-12-06 20:45:44,223 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=78.4 pTM=0.449 ipTM=0.174 tol=1.87 2024-12-06 20:45:57,881 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=78.6 pTM=0.443 ipTM=0.174 tol=8.54 2024-12-06 20:46:11,564 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=78.3 pTM=0.441 ipTM=0.172 tol=2.51 2024-12-06 20:46:25,245 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=78.4 pTM=0.439 ipTM=0.168 tol=7.05 2024-12-06 20:46:38,938 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=77.8 pTM=0.44 ipTM=0.167 tol=5.98 2024-12-06 20:46:52,609 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=77.6 pTM=0.44 ipTM=0.18 tol=6.18 2024-12-06 20:47:06,297 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=77.5 pTM=0.44 ipTM=0.2 tol=2.25 2024-12-06 20:47:19,960 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=77.8 pTM=0.441 ipTM=0.184 tol=8.59 2024-12-06 20:47:33,624 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=78.6 pTM=0.443 ipTM=0.182 tol=5.34 2024-12-06 20:47:47,288 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=79.1 pTM=0.44 ipTM=0.171 tol=7.13 2024-12-06 20:47:47,288 alphafold2_multimer_v3_model_1_seed_000 took 563.5s (30 recycles) 2024-12-06 20:48:01,358 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=79.2 pTM=0.436 ipTM=0.15 2024-12-06 20:48:15,001 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=79.3 pTM=0.458 ipTM=0.218 tol=16.7 2024-12-06 20:48:28,673 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.9 pTM=0.455 ipTM=0.187 tol=3.31 2024-12-06 20:48:42,334 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.9 pTM=0.46 ipTM=0.228 tol=2.85 2024-12-06 20:48:56,000 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=79.9 pTM=0.46 ipTM=0.261 tol=2.79 2024-12-06 20:49:09,644 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=79.7 pTM=0.461 ipTM=0.26 tol=1.4 2024-12-06 20:49:23,295 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=79.8 pTM=0.46 ipTM=0.26 tol=1.2 2024-12-06 20:49:36,948 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79.8 pTM=0.461 ipTM=0.254 tol=1.03 2024-12-06 20:49:50,597 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=79.6 pTM=0.46 ipTM=0.249 tol=1.11 2024-12-06 20:50:04,263 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.6 pTM=0.462 ipTM=0.251 tol=1.04 2024-12-06 20:50:17,915 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79.7 pTM=0.463 ipTM=0.26 tol=0.807 2024-12-06 20:50:31,567 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=79.6 pTM=0.461 ipTM=0.254 tol=0.492 2024-12-06 20:50:31,568 alphafold2_multimer_v3_model_2_seed_000 took 163.9s (11 recycles) 2024-12-06 20:50:45,633 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78.3 pTM=0.439 ipTM=0.14 2024-12-06 20:50:59,326 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=80.1 pTM=0.44 ipTM=0.195 tol=15.9 2024-12-06 20:51:12,978 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=79.6 pTM=0.441 ipTM=0.13 tol=19.8 2024-12-06 20:51:26,652 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.1 pTM=0.447 ipTM=0.16 tol=9.73 2024-12-06 20:51:40,323 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78.9 pTM=0.453 ipTM=0.19 tol=3 2024-12-06 20:51:53,994 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=78.6 pTM=0.45 ipTM=0.174 tol=3.41 2024-12-06 20:52:07,646 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.9 pTM=0.452 ipTM=0.171 tol=3.79 2024-12-06 20:52:21,306 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79 pTM=0.455 ipTM=0.184 tol=3.57 2024-12-06 20:52:34,959 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=78.7 pTM=0.455 ipTM=0.189 tol=2.15 2024-12-06 20:52:48,629 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.7 pTM=0.455 ipTM=0.19 tol=1.54 2024-12-06 20:53:02,291 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=78.8 pTM=0.455 ipTM=0.185 tol=2.65 2024-12-06 20:53:15,973 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=78.8 pTM=0.457 ipTM=0.198 tol=1.94 2024-12-06 20:53:29,615 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.8 pTM=0.456 ipTM=0.191 tol=1.04 2024-12-06 20:53:43,289 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=78.9 pTM=0.456 ipTM=0.189 tol=1.2 2024-12-06 20:53:56,963 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=78.7 pTM=0.455 ipTM=0.188 tol=1.13 2024-12-06 20:54:10,631 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=78.7 pTM=0.455 ipTM=0.187 tol=1.13 2024-12-06 20:54:24,282 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=78.6 pTM=0.454 ipTM=0.183 tol=1.53 2024-12-06 20:54:37,944 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78.8 pTM=0.455 ipTM=0.196 tol=1.22 2024-12-06 20:54:51,608 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=78.7 pTM=0.453 ipTM=0.186 tol=0.989 2024-12-06 20:55:05,265 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=78.8 pTM=0.453 ipTM=0.185 tol=1.29 2024-12-06 20:55:18,933 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=78.5 pTM=0.453 ipTM=0.19 tol=2.15 2024-12-06 20:55:32,594 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=78.9 pTM=0.454 ipTM=0.188 tol=1.9 2024-12-06 20:55:46,280 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=78.6 pTM=0.454 ipTM=0.189 tol=1.54 2024-12-06 20:55:59,930 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=78.9 pTM=0.455 ipTM=0.186 tol=1.48 2024-12-06 20:56:13,607 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=78.7 pTM=0.455 ipTM=0.189 tol=1.33 2024-12-06 20:56:27,257 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=78.9 pTM=0.454 ipTM=0.182 tol=1.71 2024-12-06 20:56:40,916 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=78.8 pTM=0.456 ipTM=0.188 tol=2.1 2024-12-06 20:56:54,582 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=78.7 pTM=0.454 ipTM=0.185 tol=0.947 2024-12-06 20:57:08,239 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=78.6 pTM=0.454 ipTM=0.189 tol=1.4 2024-12-06 20:57:21,882 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=78.8 pTM=0.456 ipTM=0.187 tol=0.833 2024-12-06 20:57:35,517 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=78.6 pTM=0.455 ipTM=0.184 tol=1.01 2024-12-06 20:57:35,518 alphafold2_multimer_v3_model_3_seed_000 took 423.5s (30 recycles) 2024-12-06 20:57:49,613 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.6 pTM=0.46 ipTM=0.164 2024-12-06 20:58:03,300 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=79.8 pTM=0.448 ipTM=0.259 tol=12.8 2024-12-06 20:58:16,983 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=78.9 pTM=0.46 ipTM=0.206 tol=11.2 2024-12-06 20:58:30,676 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=77.9 pTM=0.454 ipTM=0.193 tol=2.86 2024-12-06 20:58:44,362 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=78.3 pTM=0.453 ipTM=0.195 tol=2.99 2024-12-06 20:58:58,063 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.6 pTM=0.455 ipTM=0.199 tol=3.32 2024-12-06 20:59:11,720 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78.2 pTM=0.456 ipTM=0.2 tol=2.93 2024-12-06 20:59:25,427 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.9 pTM=0.454 ipTM=0.194 tol=1.14 2024-12-06 20:59:39,115 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77.6 pTM=0.453 ipTM=0.188 tol=2.33 2024-12-06 20:59:52,790 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=78 pTM=0.454 ipTM=0.193 tol=2 2024-12-06 21:00:06,495 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.8 pTM=0.454 ipTM=0.193 tol=1.8 2024-12-06 21:00:20,203 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.7 pTM=0.453 ipTM=0.196 tol=2.32 2024-12-06 21:00:33,906 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.6 pTM=0.455 ipTM=0.195 tol=2.32 2024-12-06 21:00:47,593 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.8 pTM=0.454 ipTM=0.194 tol=1.78 2024-12-06 21:01:01,300 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77.9 pTM=0.453 ipTM=0.19 tol=1.73 2024-12-06 21:01:15,001 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=77.7 pTM=0.454 ipTM=0.194 tol=1.71 2024-12-06 21:01:28,693 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.7 pTM=0.454 ipTM=0.193 tol=1.97 2024-12-06 21:01:42,394 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.9 pTM=0.454 ipTM=0.199 tol=1.95 2024-12-06 21:01:56,080 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.9 pTM=0.454 ipTM=0.19 tol=1.24 2024-12-06 21:02:09,774 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.6 pTM=0.455 ipTM=0.2 tol=1.94 2024-12-06 21:02:23,461 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.9 pTM=0.454 ipTM=0.195 tol=2.5 2024-12-06 21:02:37,171 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.6 pTM=0.454 ipTM=0.197 tol=2.17 2024-12-06 21:02:50,882 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.9 pTM=0.454 ipTM=0.194 tol=2.15 2024-12-06 21:03:04,571 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78 pTM=0.455 ipTM=0.198 tol=2.11 2024-12-06 21:03:18,278 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=78.1 pTM=0.453 ipTM=0.192 tol=1.89 2024-12-06 21:03:31,989 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.9 pTM=0.454 ipTM=0.199 tol=2.49 2024-12-06 21:03:45,692 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=78.1 pTM=0.455 ipTM=0.198 tol=1.85 2024-12-06 21:03:59,381 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77.6 pTM=0.453 ipTM=0.196 tol=1.43 2024-12-06 21:04:13,078 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.6 pTM=0.453 ipTM=0.194 tol=1.16 2024-12-06 21:04:26,771 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.9 pTM=0.454 ipTM=0.196 tol=1.37 2024-12-06 21:04:40,446 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.6 pTM=0.453 ipTM=0.189 tol=2.1 2024-12-06 21:04:40,447 alphafold2_multimer_v3_model_4_seed_000 took 424.5s (30 recycles) 2024-12-06 21:04:54,552 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=78.5 pTM=0.448 ipTM=0.138 2024-12-06 21:05:08,255 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.4 pTM=0.448 ipTM=0.146 tol=9.86 2024-12-06 21:05:21,954 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.2 pTM=0.449 ipTM=0.158 tol=4.88 2024-12-06 21:05:35,664 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=78.7 pTM=0.452 ipTM=0.16 tol=2.84 2024-12-06 21:05:49,370 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=79 pTM=0.461 ipTM=0.176 tol=2.45 2024-12-06 21:06:03,073 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=78.7 pTM=0.464 ipTM=0.179 tol=2.35 2024-12-06 21:06:16,757 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.1 pTM=0.461 ipTM=0.167 tol=3.13 2024-12-06 21:06:30,463 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.1 pTM=0.466 ipTM=0.179 tol=2.62 2024-12-06 21:06:44,172 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78.9 pTM=0.463 ipTM=0.173 tol=1.48 2024-12-06 21:06:57,869 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.7 pTM=0.466 ipTM=0.183 tol=20.6 2024-12-06 21:07:11,589 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78.3 pTM=0.45 ipTM=0.171 tol=20.4 2024-12-06 21:07:25,289 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=78.4 pTM=0.454 ipTM=0.171 tol=6.17 2024-12-06 21:07:38,945 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=78.4 pTM=0.459 ipTM=0.173 tol=5.23 2024-12-06 21:07:52,619 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.4 pTM=0.461 ipTM=0.183 tol=2.79 2024-12-06 21:08:06,338 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78.5 pTM=0.458 ipTM=0.177 tol=1.71 2024-12-06 21:08:20,045 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.4 pTM=0.46 ipTM=0.179 tol=2.86 2024-12-06 21:08:33,735 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=78.4 pTM=0.46 ipTM=0.177 tol=3.05 2024-12-06 21:08:47,432 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.5 pTM=0.459 ipTM=0.179 tol=2.79 2024-12-06 21:09:01,150 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=78.6 pTM=0.461 ipTM=0.186 tol=1.02 2024-12-06 21:09:14,852 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=78.3 pTM=0.459 ipTM=0.184 tol=1.26 2024-12-06 21:09:28,554 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=78.3 pTM=0.461 ipTM=0.184 tol=2.44 2024-12-06 21:09:42,259 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=78.4 pTM=0.459 ipTM=0.18 tol=1.94 2024-12-06 21:09:55,969 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=78.3 pTM=0.46 ipTM=0.179 tol=1.57 2024-12-06 21:10:09,663 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=78.3 pTM=0.461 ipTM=0.179 tol=0.819 2024-12-06 21:10:23,351 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=78.4 pTM=0.462 ipTM=0.183 tol=2.19 2024-12-06 21:10:37,056 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=78.4 pTM=0.46 ipTM=0.184 tol=2.21 2024-12-06 21:10:50,765 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=78.4 pTM=0.461 ipTM=0.183 tol=2 2024-12-06 21:11:04,461 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=78.2 pTM=0.459 ipTM=0.179 tol=1.93 2024-12-06 21:11:18,159 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=78.2 pTM=0.46 ipTM=0.183 tol=0.956 2024-12-06 21:11:31,853 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=78.2 pTM=0.461 ipTM=0.186 tol=2.07 2024-12-06 21:11:45,525 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=78.1 pTM=0.46 ipTM=0.192 tol=2.08 2024-12-06 21:11:45,526 alphafold2_multimer_v3_model_5_seed_000 took 424.7s (30 recycles) 2024-12-06 21:11:45,949 reranking models by 'multimer' metric 2024-12-06 21:11:49,563 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 21:12:56,841 Relaxation took 70.9s 2024-12-06 21:12:56,842 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=79.6 pTM=0.461 ipTM=0.254 2024-12-06 21:13:48,592 Relaxation took 51.7s 2024-12-06 21:13:48,592 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.1 pTM=0.46 ipTM=0.192 2024-12-06 21:15:06,697 Relaxation took 78.1s 2024-12-06 21:15:06,697 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.6 pTM=0.453 ipTM=0.189 2024-12-06 21:21:54,144 Relaxation took 407.4s 2024-12-06 21:21:54,145 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.6 pTM=0.455 ipTM=0.184 2024-12-06 21:22:32,184 Relaxation took 38.0s 2024-12-06 21:22:32,184 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=79.1 pTM=0.44 ipTM=0.171 2024-12-06 21:22:33,650 Done