2024-12-06 20:42:31,869 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 20:42:32,191 Running on GPU 2024-12-06 20:42:35,997 Found 6 citations for tools or databases 2024-12-06 20:42:35,997 Query 1/1: KLHL22_ATG4C (length 1092) 2024-12-06 20:42:38,005 Sleeping for 7s. Reason: PENDING 2024-12-06 20:42:45,266 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:42:53,523 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:43:00,781 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:43:06,032 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:43:14,297 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:43:22,558 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:43:32,823 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:43:38,078 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:43:48,334 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:43:55,595 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:44:02,856 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:44:08,130 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:44:15,385 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:44:23,642 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:44:30,898 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:44:44,659 Setting max_seq=508, max_extra_seq=2048 2024-12-06 20:47:17,257 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=77.3 pTM=0.546 ipTM=0.243 2024-12-06 20:47:43,666 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=78.8 pTM=0.541 ipTM=0.313 tol=9.11 2024-12-06 20:48:10,201 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=78.7 pTM=0.538 ipTM=0.233 tol=5.29 2024-12-06 20:48:36,796 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78.8 pTM=0.534 ipTM=0.238 tol=3.54 2024-12-06 20:49:03,450 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78.4 pTM=0.546 ipTM=0.252 tol=15.7 2024-12-06 20:49:30,097 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=78.8 pTM=0.558 ipTM=0.281 tol=2.41 2024-12-06 20:49:56,798 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78.2 pTM=0.547 ipTM=0.278 tol=2.34 2024-12-06 20:50:23,522 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=78.2 pTM=0.549 ipTM=0.283 tol=1.32 2024-12-06 20:50:50,268 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=78.1 pTM=0.543 ipTM=0.25 tol=2.48 2024-12-06 20:51:17,025 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=78.2 pTM=0.545 ipTM=0.304 tol=1.02 2024-12-06 20:51:43,810 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=78.2 pTM=0.546 ipTM=0.273 tol=1.19 2024-12-06 20:52:10,591 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=78.2 pTM=0.545 ipTM=0.28 tol=1.2 2024-12-06 20:52:37,354 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=78 pTM=0.545 ipTM=0.257 tol=0.998 2024-12-06 20:53:04,123 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=78.2 pTM=0.546 ipTM=0.28 tol=0.733 2024-12-06 20:53:30,920 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78.2 pTM=0.542 ipTM=0.264 tol=1.75 2024-12-06 20:53:57,716 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=78 pTM=0.542 ipTM=0.297 tol=1.43 2024-12-06 20:54:24,493 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=78 pTM=0.543 ipTM=0.255 tol=0.885 2024-12-06 20:54:51,299 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=78.4 pTM=0.544 ipTM=0.301 tol=0.946 2024-12-06 20:55:18,118 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.1 pTM=0.542 ipTM=0.256 tol=1.75 2024-12-06 20:55:44,933 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=78 pTM=0.542 ipTM=0.308 tol=1.42 2024-12-06 20:56:11,761 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=78 pTM=0.544 ipTM=0.292 tol=1.05 2024-12-06 20:56:38,571 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=78 pTM=0.544 ipTM=0.303 tol=1.21 2024-12-06 20:57:05,391 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=77.9 pTM=0.542 ipTM=0.26 tol=1.28 2024-12-06 20:57:32,205 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=78.1 pTM=0.542 ipTM=0.272 tol=0.709 2024-12-06 20:57:59,035 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=77.9 pTM=0.542 ipTM=0.257 tol=0.533 2024-12-06 20:58:25,856 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=78 pTM=0.541 ipTM=0.301 tol=1.69 2024-12-06 20:58:52,693 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=78.1 pTM=0.546 ipTM=0.288 tol=1.41 2024-12-06 20:59:19,506 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=77.9 pTM=0.543 ipTM=0.29 tol=1.02 2024-12-06 20:59:46,330 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=78.1 pTM=0.545 ipTM=0.269 tol=1.51 2024-12-06 21:00:13,102 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=78 pTM=0.539 ipTM=0.273 tol=1.48 2024-12-06 21:00:39,866 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=77.9 pTM=0.541 ipTM=0.262 tol=0.885 2024-12-06 21:00:39,867 alphafold2_multimer_v3_model_1_seed_000 took 950.1s (30 recycles) 2024-12-06 21:01:07,419 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=78.1 pTM=0.533 ipTM=0.435 2024-12-06 21:01:34,244 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=79.1 pTM=0.572 ipTM=0.333 tol=12.7 2024-12-06 21:02:01,059 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=79.1 pTM=0.565 ipTM=0.21 tol=3.33 2024-12-06 21:02:27,842 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.2 pTM=0.566 ipTM=0.373 tol=1.44 2024-12-06 21:02:54,635 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=79.5 pTM=0.566 ipTM=0.383 tol=1.41 2024-12-06 21:03:21,419 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=79.4 pTM=0.567 ipTM=0.345 tol=0.999 2024-12-06 21:03:48,209 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=79.2 pTM=0.562 ipTM=0.294 tol=1.03 2024-12-06 21:04:14,996 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79.2 pTM=0.565 ipTM=0.294 tol=0.918 2024-12-06 21:04:41,812 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=79.4 pTM=0.562 ipTM=0.275 tol=0.854 2024-12-06 21:05:08,644 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.3 pTM=0.567 ipTM=0.288 tol=1.21 2024-12-06 21:05:35,439 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79.3 pTM=0.564 ipTM=0.27 tol=0.707 2024-12-06 21:06:02,267 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=79.2 pTM=0.566 ipTM=0.255 tol=0.652 2024-12-06 21:06:29,099 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=79.2 pTM=0.562 ipTM=0.27 tol=0.975 2024-12-06 21:06:55,913 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=79.4 pTM=0.562 ipTM=0.327 tol=1.1 2024-12-06 21:07:22,737 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=79.2 pTM=0.546 ipTM=0.324 tol=1.92 2024-12-06 21:07:49,594 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=79.6 pTM=0.56 ipTM=0.296 tol=1.78 2024-12-06 21:08:16,449 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=79.4 pTM=0.557 ipTM=0.241 tol=0.995 2024-12-06 21:08:43,328 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=79.1 pTM=0.545 ipTM=0.254 tol=2.28 2024-12-06 21:09:10,158 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=79.5 pTM=0.554 ipTM=0.259 tol=1.35 2024-12-06 21:09:36,981 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=79.3 pTM=0.561 ipTM=0.266 tol=1.11 2024-12-06 21:10:03,783 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=79.4 pTM=0.562 ipTM=0.266 tol=0.555 2024-12-06 21:10:30,597 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=79.2 pTM=0.555 ipTM=0.271 tol=1.11 2024-12-06 21:10:57,463 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.8 pTM=0.536 ipTM=0.23 tol=5.99 2024-12-06 21:11:24,297 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=79.5 pTM=0.556 ipTM=0.252 tol=5.33 2024-12-06 21:11:51,122 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=79.1 pTM=0.552 ipTM=0.218 tol=1.26 2024-12-06 21:12:17,968 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=79.3 pTM=0.554 ipTM=0.252 tol=0.718 2024-12-06 21:12:44,802 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=79.4 pTM=0.554 ipTM=0.253 tol=1.3 2024-12-06 21:13:11,605 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=79.1 pTM=0.542 ipTM=0.244 tol=2.21 2024-12-06 21:13:38,433 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=79.4 pTM=0.559 ipTM=0.199 tol=2.69 2024-12-06 21:14:05,228 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=79.4 pTM=0.558 ipTM=0.277 tol=0.834 2024-12-06 21:14:32,039 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=79.5 pTM=0.552 ipTM=0.288 tol=1.42 2024-12-06 21:14:32,040 alphafold2_multimer_v3_model_2_seed_000 took 831.5s (30 recycles) 2024-12-06 21:14:59,646 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78 pTM=0.539 ipTM=0.181 2024-12-06 21:15:26,534 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=78.4 pTM=0.556 ipTM=0.183 tol=8.8 2024-12-06 21:15:53,408 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.2 pTM=0.561 ipTM=0.196 tol=5.18 2024-12-06 21:16:20,274 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=78 pTM=0.549 ipTM=0.187 tol=5.11 2024-12-06 21:16:47,124 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78 pTM=0.556 ipTM=0.184 tol=2.21 2024-12-06 21:17:13,980 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.9 pTM=0.562 ipTM=0.202 tol=2.64 2024-12-06 21:17:40,877 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.8 pTM=0.531 ipTM=0.185 tol=20.2 2024-12-06 21:18:07,753 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=78.4 pTM=0.54 ipTM=0.189 tol=14.5 2024-12-06 21:18:34,657 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=78.8 pTM=0.53 ipTM=0.188 tol=7.87 2024-12-06 21:19:01,518 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.2 pTM=0.543 ipTM=0.193 tol=9.71 2024-12-06 21:19:28,438 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=78.8 pTM=0.53 ipTM=0.161 tol=12.7 2024-12-06 21:19:55,331 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=78.2 pTM=0.548 ipTM=0.245 tol=14.8 2024-12-06 21:20:22,246 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.7 pTM=0.53 ipTM=0.182 tol=15.6 2024-12-06 21:20:49,152 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=78.2 pTM=0.547 ipTM=0.201 tol=15.2 2024-12-06 21:21:16,082 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=78.1 pTM=0.546 ipTM=0.178 tol=4.05 2024-12-06 21:21:42,955 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.8 pTM=0.56 ipTM=0.203 tol=4.07 2024-12-06 21:22:09,821 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.6 pTM=0.548 ipTM=0.185 tol=6.28 2024-12-06 21:22:36,691 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77.9 pTM=0.562 ipTM=0.222 tol=3.89 2024-12-06 21:23:03,580 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=77.9 pTM=0.554 ipTM=0.188 tol=3.61 2024-12-06 21:23:30,455 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.8 pTM=0.562 ipTM=0.208 tol=1.51 2024-12-06 21:23:57,325 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.9 pTM=0.56 ipTM=0.223 tol=2.85 2024-12-06 21:24:24,193 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.8 pTM=0.559 ipTM=0.206 tol=1.62 2024-12-06 21:24:51,103 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.9 pTM=0.551 ipTM=0.18 tol=2.25 2024-12-06 21:25:17,984 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=78.1 pTM=0.562 ipTM=0.209 tol=6.68 2024-12-06 21:25:44,860 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=78.1 pTM=0.555 ipTM=0.195 tol=3.49 2024-12-06 21:26:11,789 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=78 pTM=0.54 ipTM=0.155 tol=8.25 2024-12-06 21:26:38,713 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=78.1 pTM=0.55 ipTM=0.18 tol=4.27 2024-12-06 21:27:05,627 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=78 pTM=0.554 ipTM=0.186 tol=3.8 2024-12-06 21:27:32,528 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=78.1 pTM=0.555 ipTM=0.188 tol=1.54 2024-12-06 21:27:59,454 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.8 pTM=0.544 ipTM=0.168 tol=7.13 2024-12-06 21:28:26,393 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=78.5 pTM=0.534 ipTM=0.188 tol=11.8 2024-12-06 21:28:26,394 alphafold2_multimer_v3_model_3_seed_000 took 833.6s (30 recycles) 2024-12-06 21:28:54,034 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.5 pTM=0.554 ipTM=0.184 2024-12-06 21:29:20,951 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=79.1 pTM=0.542 ipTM=0.266 tol=9.16 2024-12-06 21:29:47,859 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=79.4 pTM=0.554 ipTM=0.229 tol=3.8 2024-12-06 21:30:14,772 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=79.7 pTM=0.539 ipTM=0.229 tol=7.02 2024-12-06 21:30:41,725 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=79.4 pTM=0.55 ipTM=0.216 tol=18 2024-12-06 21:31:08,683 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=79.2 pTM=0.55 ipTM=0.243 tol=4.02 2024-12-06 21:31:35,618 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=79.4 pTM=0.551 ipTM=0.209 tol=4.11 2024-12-06 21:32:02,576 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=80.1 pTM=0.533 ipTM=0.255 tol=21.1 2024-12-06 21:32:29,482 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=79.9 pTM=0.538 ipTM=0.215 tol=5.07 2024-12-06 21:32:56,415 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=79.3 pTM=0.544 ipTM=0.254 tol=12.8 2024-12-06 21:33:23,340 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=79.1 pTM=0.552 ipTM=0.244 tol=4.87 2024-12-06 21:33:50,255 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=79.2 pTM=0.557 ipTM=0.221 tol=3.33 2024-12-06 21:34:17,172 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=79 pTM=0.555 ipTM=0.225 tol=2.45 2024-12-06 21:34:44,096 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=78.9 pTM=0.558 ipTM=0.232 tol=1.91 2024-12-06 21:35:11,056 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=79.2 pTM=0.547 ipTM=0.225 tol=4.42 2024-12-06 21:35:37,984 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.9 pTM=0.55 ipTM=0.225 tol=2.39 2024-12-06 21:36:04,872 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.6 pTM=0.559 ipTM=0.229 tol=4.03 2024-12-06 21:36:31,780 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=78.9 pTM=0.554 ipTM=0.234 tol=3.08 2024-12-06 21:36:58,702 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=79 pTM=0.549 ipTM=0.21 tol=4.27 2024-12-06 21:37:25,588 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=78.7 pTM=0.556 ipTM=0.21 tol=3.96 2024-12-06 21:37:52,486 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78.5 pTM=0.558 ipTM=0.213 tol=1.48 2024-12-06 21:38:19,391 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=78.6 pTM=0.555 ipTM=0.202 tol=2.46 2024-12-06 21:38:46,293 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=78.7 pTM=0.554 ipTM=0.222 tol=3.12 2024-12-06 21:39:13,208 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78.8 pTM=0.561 ipTM=0.21 tol=4.43 2024-12-06 21:39:40,131 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=78.6 pTM=0.559 ipTM=0.279 tol=2.27 2024-12-06 21:40:07,047 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=78.8 pTM=0.562 ipTM=0.231 tol=2.41 2024-12-06 21:40:33,971 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=78.9 pTM=0.556 ipTM=0.242 tol=2.93 2024-12-06 21:41:00,883 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78.9 pTM=0.561 ipTM=0.224 tol=3.03 2024-12-06 21:41:27,807 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=78.7 pTM=0.559 ipTM=0.25 tol=1.98 2024-12-06 21:41:54,755 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=78.9 pTM=0.56 ipTM=0.245 tol=1.56 2024-12-06 21:42:21,672 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=78.6 pTM=0.558 ipTM=0.236 tol=1.93 2024-12-06 21:42:21,673 alphafold2_multimer_v3_model_4_seed_000 took 834.6s (30 recycles) 2024-12-06 21:42:49,162 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.7 pTM=0.554 ipTM=0.37 2024-12-06 21:43:16,020 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.2 pTM=0.555 ipTM=0.286 tol=9.24 2024-12-06 21:43:42,880 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.3 pTM=0.559 ipTM=0.198 tol=8.34 2024-12-06 21:44:09,723 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=78.6 pTM=0.558 ipTM=0.265 tol=3.16 2024-12-06 21:44:36,598 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=78.8 pTM=0.554 ipTM=0.293 tol=1.59 2024-12-06 21:45:03,475 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=78.8 pTM=0.544 ipTM=0.239 tol=2.26 2024-12-06 21:45:30,393 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=78.3 pTM=0.533 ipTM=0.178 tol=6.81 2024-12-06 21:45:57,299 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=78.1 pTM=0.544 ipTM=0.184 tol=14.1 2024-12-06 21:46:24,201 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78 pTM=0.553 ipTM=0.19 tol=4.5 2024-12-06 21:46:51,073 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=77.8 pTM=0.541 ipTM=0.162 tol=3.28 2024-12-06 21:47:17,988 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78.2 pTM=0.542 ipTM=0.151 tol=3.69 2024-12-06 21:47:44,868 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=78.1 pTM=0.536 ipTM=0.19 tol=19.2 2024-12-06 21:48:11,753 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=78 pTM=0.531 ipTM=0.159 tol=8.66 2024-12-06 21:48:38,653 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.1 pTM=0.538 ipTM=0.181 tol=10.1 2024-12-06 21:49:05,533 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78.2 pTM=0.536 ipTM=0.172 tol=3.19 2024-12-06 21:49:32,401 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.2 pTM=0.534 ipTM=0.172 tol=4.7 2024-12-06 21:49:59,303 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=77.8 pTM=0.531 ipTM=0.182 tol=10 2024-12-06 21:50:26,203 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.1 pTM=0.536 ipTM=0.191 tol=10.1 2024-12-06 21:50:53,115 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=77.9 pTM=0.532 ipTM=0.192 tol=6.66 2024-12-06 21:51:20,035 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=77.9 pTM=0.538 ipTM=0.176 tol=8.78 2024-12-06 21:51:46,926 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=77.8 pTM=0.55 ipTM=0.2 tol=6.79 2024-12-06 21:52:13,842 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=77.8 pTM=0.545 ipTM=0.182 tol=3.18 2024-12-06 21:52:40,753 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=77.9 pTM=0.546 ipTM=0.165 tol=2.56 2024-12-06 21:53:07,689 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=78.1 pTM=0.542 ipTM=0.154 tol=3.58 2024-12-06 21:53:34,615 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=77.8 pTM=0.544 ipTM=0.184 tol=2.61 2024-12-06 21:54:01,544 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=77.9 pTM=0.548 ipTM=0.171 tol=2.76 2024-12-06 21:54:28,469 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=78 pTM=0.544 ipTM=0.186 tol=2.72 2024-12-06 21:54:55,385 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=78 pTM=0.549 ipTM=0.226 tol=3.32 2024-12-06 21:55:22,300 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=77.8 pTM=0.548 ipTM=0.22 tol=2.49 2024-12-06 21:55:49,188 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=77.9 pTM=0.542 ipTM=0.179 tol=2.1 2024-12-06 21:56:16,086 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=77.9 pTM=0.55 ipTM=0.18 tol=2.2 2024-12-06 21:56:16,087 alphafold2_multimer_v3_model_5_seed_000 took 833.7s (30 recycles) 2024-12-06 21:56:16,807 reranking models by 'multimer' metric 2024-12-06 21:56:19,412 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 21:58:21,212 Relaxation took 124.4s 2024-12-06 21:58:21,212 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=79.5 pTM=0.552 ipTM=0.288 2024-12-06 22:11:24,699 Relaxation took 783.5s 2024-12-06 22:11:24,700 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=77.9 pTM=0.541 ipTM=0.262 2024-12-06 22:13:05,302 Relaxation took 100.6s 2024-12-06 22:13:05,302 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=78.6 pTM=0.558 ipTM=0.236 2024-12-06 22:14:12,353 Relaxation took 67.0s 2024-12-06 22:14:12,354 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.5 pTM=0.534 ipTM=0.188 2024-12-06 22:15:29,685 Relaxation took 77.3s 2024-12-06 22:15:29,685 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=77.9 pTM=0.55 ipTM=0.18 2024-12-06 22:15:31,872 Done