2024-12-06 20:44:14,111 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 20:44:14,440 Running on GPU 2024-12-06 20:44:18,272 Found 6 citations for tools or databases 2024-12-06 20:44:18,273 Query 1/1: KLHL22_CIZ1 (length 1532) 2024-12-06 20:44:18,544 Sleeping for 7s. Reason: PENDING 2024-12-06 20:44:25,800 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:44:33,065 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:44:41,326 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:44:46,580 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:44:52,836 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:44:59,103 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:45:08,365 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:45:13,625 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:45:23,885 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:45:29,135 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:45:39,401 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:45:46,670 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:45:53,930 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:46:04,196 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:46:12,468 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:46:17,723 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:46:23,985 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:46:30,240 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:46:37,503 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:46:45,297 Sleeping for 5s. Reason: PENDING 2024-12-06 20:46:50,902 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:47:01,168 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:47:11,425 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:47:21,693 Sleeping for 9s. Reason: RUNNING 2024-12-06 20:47:30,958 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:47:39,212 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:47:44,473 Sleeping for 5s. Reason: RUNNING 2024-12-06 20:47:49,730 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:47:55,984 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:48:03,240 Sleeping for 8s. Reason: RUNNING 2024-12-06 20:48:11,504 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:48:21,761 Sleeping for 6s. Reason: RUNNING 2024-12-06 20:48:28,011 Sleeping for 7s. Reason: RUNNING 2024-12-06 20:48:35,267 Sleeping for 10s. Reason: RUNNING 2024-12-06 20:48:48,650 Setting max_seq=508, max_extra_seq=2048 2024-12-06 20:52:11,128 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.3 pTM=0.444 ipTM=0.288 2024-12-06 20:53:20,469 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.9 pTM=0.473 ipTM=0.582 tol=17.5 2024-12-06 20:54:29,847 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.6 pTM=0.472 ipTM=0.618 tol=11.6 2024-12-06 20:55:39,286 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51 pTM=0.47 ipTM=0.598 tol=7.12 2024-12-06 20:56:48,781 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.8 pTM=0.469 ipTM=0.562 tol=5 2024-12-06 20:57:58,301 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.8 pTM=0.469 ipTM=0.543 tol=6.71 2024-12-06 20:59:07,845 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=51.1 pTM=0.47 ipTM=0.579 tol=4.03 2024-12-06 21:00:17,410 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.8 pTM=0.469 ipTM=0.535 tol=5.87 2024-12-06 21:01:26,936 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.9 pTM=0.469 ipTM=0.523 tol=5.53 2024-12-06 21:02:36,476 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51.1 pTM=0.472 ipTM=0.559 tol=5.33 2024-12-06 21:03:46,000 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.9 pTM=0.472 ipTM=0.55 tol=5.18 2024-12-06 21:04:55,515 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.7 pTM=0.472 ipTM=0.531 tol=4.3 2024-12-06 21:06:05,034 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50.9 pTM=0.473 ipTM=0.525 tol=3.08 2024-12-06 21:07:14,536 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=50.6 pTM=0.472 ipTM=0.517 tol=3.56 2024-12-06 21:08:24,039 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.6 pTM=0.471 ipTM=0.491 tol=2.73 2024-12-06 21:09:33,551 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=50.8 pTM=0.471 ipTM=0.527 tol=3.15 2024-12-06 21:10:43,066 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.8 pTM=0.473 ipTM=0.539 tol=3.24 2024-12-06 21:11:52,550 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=50.5 pTM=0.471 ipTM=0.502 tol=2.87 2024-12-06 21:13:02,019 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=50.5 pTM=0.471 ipTM=0.486 tol=2.97 2024-12-06 21:14:11,533 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=50.5 pTM=0.471 ipTM=0.501 tol=1.64 2024-12-06 21:15:21,038 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=50.8 pTM=0.473 ipTM=0.53 tol=2.77 2024-12-06 21:16:30,523 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=50.9 pTM=0.474 ipTM=0.538 tol=4.68 2024-12-06 21:17:39,967 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=50.7 pTM=0.472 ipTM=0.511 tol=3.99 2024-12-06 21:18:49,427 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=50.5 pTM=0.473 ipTM=0.493 tol=5.32 2024-12-06 21:19:58,840 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=50.6 pTM=0.472 ipTM=0.502 tol=3.56 2024-12-06 21:21:08,237 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=50.4 pTM=0.47 ipTM=0.498 tol=2.79 2024-12-06 21:22:17,662 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=50.5 pTM=0.469 ipTM=0.463 tol=4.38 2024-12-06 21:23:27,062 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=50.4 pTM=0.469 ipTM=0.48 tol=4.28 2024-12-06 21:24:36,507 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=50.6 pTM=0.47 ipTM=0.47 tol=3.39 2024-12-06 21:25:45,955 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.3 pTM=0.47 ipTM=0.454 tol=4.41 2024-12-06 21:26:55,457 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.8 pTM=0.472 ipTM=0.511 tol=5.25 2024-12-06 21:26:55,459 alphafold2_multimer_v3_model_1_seed_000 took 2281.2s (30 recycles) 2024-12-06 21:28:06,449 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.4 pTM=0.45 ipTM=0.294 2024-12-06 21:29:16,140 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.4 pTM=0.459 ipTM=0.279 tol=19.8 2024-12-06 21:30:25,818 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.8 pTM=0.461 ipTM=0.315 tol=10 2024-12-06 21:31:35,528 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.8 pTM=0.458 ipTM=0.3 tol=7.84 2024-12-06 21:32:45,230 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.8 pTM=0.458 ipTM=0.297 tol=8 2024-12-06 21:33:54,940 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.7 pTM=0.457 ipTM=0.299 tol=7.74 2024-12-06 21:35:04,635 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.8 pTM=0.458 ipTM=0.309 tol=7.27 2024-12-06 21:36:14,304 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=51.8 pTM=0.459 ipTM=0.314 tol=7.61 2024-12-06 21:37:23,982 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.9 pTM=0.46 ipTM=0.328 tol=9.06 2024-12-06 21:38:33,649 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.9 pTM=0.462 ipTM=0.329 tol=9.24 2024-12-06 21:39:43,310 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=51.9 pTM=0.46 ipTM=0.312 tol=8.23 2024-12-06 21:40:52,967 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.8 pTM=0.458 ipTM=0.308 tol=6.38 2024-12-06 21:42:02,606 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52 pTM=0.458 ipTM=0.309 tol=8.54 2024-12-06 21:43:12,270 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51.8 pTM=0.457 ipTM=0.299 tol=6.31 2024-12-06 21:44:21,963 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52 pTM=0.459 ipTM=0.314 tol=9.57 2024-12-06 21:45:31,598 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=51.9 pTM=0.459 ipTM=0.316 tol=6.96 2024-12-06 21:46:41,240 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=51.8 pTM=0.458 ipTM=0.295 tol=3.63 2024-12-06 21:47:50,898 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=51.9 pTM=0.459 ipTM=0.311 tol=3.37 2024-12-06 21:49:00,536 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=51.8 pTM=0.457 ipTM=0.3 tol=2.91 2024-12-06 21:50:10,141 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=51.8 pTM=0.459 ipTM=0.319 tol=3.43 2024-12-06 21:51:19,750 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=51.8 pTM=0.457 ipTM=0.293 tol=3.09 2024-12-06 21:52:29,373 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.8 pTM=0.456 ipTM=0.296 tol=2.4 2024-12-06 21:53:38,982 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=51.9 pTM=0.458 ipTM=0.313 tol=2.49 2024-12-06 21:54:48,606 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51.8 pTM=0.458 ipTM=0.306 tol=2.96 2024-12-06 21:55:58,176 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=51.9 pTM=0.458 ipTM=0.316 tol=2.75 2024-12-06 21:57:07,739 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.8 pTM=0.459 ipTM=0.33 tol=2.55 2024-12-06 21:58:17,326 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.1 pTM=0.461 ipTM=0.327 tol=2.69 2024-12-06 21:59:26,875 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52 pTM=0.46 ipTM=0.321 tol=2.73 2024-12-06 22:00:36,407 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52 pTM=0.458 ipTM=0.314 tol=2.46 2024-12-06 22:01:45,996 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52 pTM=0.461 ipTM=0.332 tol=2.44 2024-12-06 22:02:55,594 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52 pTM=0.459 ipTM=0.324 tol=2.42 2024-12-06 22:02:55,595 alphafold2_multimer_v3_model_2_seed_000 took 2158.8s (30 recycles) 2024-12-06 22:04:06,712 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=50.2 pTM=0.46 ipTM=0.252 2024-12-06 22:05:16,553 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=50.5 pTM=0.465 ipTM=0.244 tol=17.7 2024-12-06 22:06:26,397 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.9 pTM=0.461 ipTM=0.474 tol=12.8 2024-12-06 22:07:36,255 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.9 pTM=0.458 ipTM=0.321 tol=17.8 2024-12-06 22:08:46,147 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.9 pTM=0.47 ipTM=0.498 tol=18.2 2024-12-06 22:09:56,037 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50.1 pTM=0.471 ipTM=0.472 tol=11.5 2024-12-06 22:11:05,897 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.9 pTM=0.47 ipTM=0.454 tol=9.98 2024-12-06 22:12:15,779 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.8 pTM=0.467 ipTM=0.371 tol=5.69 2024-12-06 22:13:25,641 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=50.2 pTM=0.468 ipTM=0.426 tol=6.47 2024-12-06 22:14:35,555 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=50.1 pTM=0.47 ipTM=0.452 tol=10.4 2024-12-06 22:15:45,412 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=50.3 pTM=0.471 ipTM=0.499 tol=11.5 2024-12-06 22:16:55,285 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.1 pTM=0.468 ipTM=0.435 tol=4.58 2024-12-06 22:18:05,198 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=50.3 pTM=0.472 ipTM=0.514 tol=10.8 2024-12-06 22:19:15,129 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50.5 pTM=0.472 ipTM=0.53 tol=13.5 2024-12-06 22:20:25,031 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.8 pTM=0.469 ipTM=0.467 tol=19.2 2024-12-06 22:21:34,930 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.8 pTM=0.465 ipTM=0.425 tol=20.2 2024-12-06 22:22:44,819 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.1 pTM=0.47 ipTM=0.444 tol=12.3 2024-12-06 22:23:54,718 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.1 pTM=0.465 ipTM=0.408 tol=11 2024-12-06 22:25:04,557 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.3 pTM=0.475 ipTM=0.523 tol=8.52 2024-12-06 22:26:14,366 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.6 pTM=0.471 ipTM=0.516 tol=6.08 2024-12-06 22:27:24,153 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.2 pTM=0.469 ipTM=0.479 tol=4.48 2024-12-06 22:28:33,996 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.1 pTM=0.467 ipTM=0.421 tol=3.7 2024-12-06 22:29:43,863 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.1 pTM=0.468 ipTM=0.468 tol=3.25 2024-12-06 22:30:53,771 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.1 pTM=0.469 ipTM=0.434 tol=7.85 2024-12-06 22:32:03,664 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50.5 pTM=0.471 ipTM=0.544 tol=8.52 2024-12-06 22:33:13,536 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.6 pTM=0.472 ipTM=0.535 tol=3.77 2024-12-06 22:34:23,386 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50.6 pTM=0.471 ipTM=0.515 tol=9.52 2024-12-06 22:35:33,251 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.2 pTM=0.469 ipTM=0.479 tol=9.2 2024-12-06 22:36:43,181 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.2 pTM=0.467 ipTM=0.466 tol=4.51 2024-12-06 22:37:53,094 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50 pTM=0.467 ipTM=0.413 tol=3.55 2024-12-06 22:39:03,024 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.4 pTM=0.471 ipTM=0.505 tol=7.85 2024-12-06 22:39:03,026 alphafold2_multimer_v3_model_3_seed_000 took 2166.0s (30 recycles) 2024-12-06 22:40:14,301 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.1 pTM=0.461 ipTM=0.27 2024-12-06 22:41:24,212 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.1 pTM=0.479 ipTM=0.648 tol=23.4 2024-12-06 22:42:34,046 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50 pTM=0.482 ipTM=0.677 tol=15.3 2024-12-06 22:43:43,915 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49.8 pTM=0.484 ipTM=0.634 tol=10.7 2024-12-06 22:44:53,767 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.8 pTM=0.483 ipTM=0.598 tol=6.75 2024-12-06 22:46:03,597 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.7 pTM=0.484 ipTM=0.596 tol=5.2 2024-12-06 22:47:13,366 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.9 pTM=0.482 ipTM=0.589 tol=5.05 2024-12-06 22:48:23,134 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.9 pTM=0.484 ipTM=0.577 tol=5.1 2024-12-06 22:49:32,922 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50 pTM=0.483 ipTM=0.571 tol=4.84 2024-12-06 22:50:42,758 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.8 pTM=0.482 ipTM=0.576 tol=4.01 2024-12-06 22:51:52,571 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.9 pTM=0.481 ipTM=0.579 tol=3.33 2024-12-06 22:53:02,413 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.8 pTM=0.484 ipTM=0.586 tol=3.08 2024-12-06 22:54:12,215 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.7 pTM=0.481 ipTM=0.572 tol=3.9 2024-12-06 22:55:21,999 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.8 pTM=0.484 ipTM=0.579 tol=4.73 2024-12-06 22:56:31,792 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.7 pTM=0.479 ipTM=0.565 tol=4.29 2024-12-06 22:57:41,629 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.4 pTM=0.479 ipTM=0.549 tol=2.62 2024-12-06 22:58:51,436 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.8 pTM=0.48 ipTM=0.561 tol=4.7 2024-12-06 23:00:01,236 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.8 pTM=0.479 ipTM=0.562 tol=3.02 2024-12-06 23:01:11,012 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.6 pTM=0.479 ipTM=0.547 tol=2.83 2024-12-06 23:02:20,775 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.8 pTM=0.48 ipTM=0.56 tol=2.54 2024-12-06 23:03:30,553 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.7 pTM=0.48 ipTM=0.567 tol=2.48 2024-12-06 23:04:40,382 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.6 pTM=0.479 ipTM=0.549 tol=3.14 2024-12-06 23:05:50,212 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.7 pTM=0.479 ipTM=0.551 tol=3.42 2024-12-06 23:07:00,021 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.6 pTM=0.479 ipTM=0.54 tol=2.98 2024-12-06 23:08:09,814 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.7 pTM=0.479 ipTM=0.553 tol=7.05 2024-12-06 23:09:19,613 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.7 pTM=0.48 ipTM=0.56 tol=8.7 2024-12-06 23:10:29,417 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.8 pTM=0.479 ipTM=0.552 tol=8.75 2024-12-06 23:11:39,203 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49.9 pTM=0.481 ipTM=0.567 tol=8.22 2024-12-06 23:12:48,961 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49.8 pTM=0.48 ipTM=0.552 tol=2.91 2024-12-06 23:13:58,750 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.7 pTM=0.479 ipTM=0.538 tol=3.82 2024-12-06 23:15:08,560 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.7 pTM=0.479 ipTM=0.563 tol=2.26 2024-12-06 23:15:08,561 alphafold2_multimer_v3_model_4_seed_000 took 2164.1s (30 recycles) 2024-12-06 23:16:19,901 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.2 pTM=0.445 ipTM=0.189 2024-12-06 23:17:29,798 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50 pTM=0.477 ipTM=0.599 tol=22.4 2024-12-06 23:18:39,657 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.1 pTM=0.473 ipTM=0.629 tol=16.3 2024-12-06 23:19:49,483 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.1 pTM=0.476 ipTM=0.594 tol=11.8 2024-12-06 23:20:59,365 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.8 pTM=0.47 ipTM=0.548 tol=10.6 2024-12-06 23:22:09,246 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=49.8 pTM=0.474 ipTM=0.546 tol=9.77 2024-12-06 23:23:19,117 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.6 pTM=0.469 ipTM=0.517 tol=6.71 2024-12-06 23:24:28,976 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.5 pTM=0.472 ipTM=0.498 tol=12.4 2024-12-06 23:25:38,841 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.4 pTM=0.468 ipTM=0.47 tol=8.37 2024-12-06 23:26:48,671 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.6 pTM=0.471 ipTM=0.497 tol=9.55 2024-12-06 23:27:58,528 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.6 pTM=0.469 ipTM=0.511 tol=6.33 2024-12-06 23:29:08,375 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.8 pTM=0.471 ipTM=0.515 tol=8.42 2024-12-06 23:30:18,250 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.5 pTM=0.47 ipTM=0.492 tol=9.84 2024-12-06 23:31:28,144 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.5 pTM=0.47 ipTM=0.501 tol=10.7 2024-12-06 23:32:38,049 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.4 pTM=0.466 ipTM=0.464 tol=4.92 2024-12-06 23:33:47,917 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.8 pTM=0.469 ipTM=0.513 tol=5.12 2024-12-06 23:34:57,760 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.8 pTM=0.471 ipTM=0.545 tol=10.8 2024-12-06 23:36:07,634 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49.8 pTM=0.469 ipTM=0.537 tol=10.1 2024-12-06 23:37:17,524 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.7 pTM=0.469 ipTM=0.51 tol=5.49 2024-12-06 23:38:27,396 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.8 pTM=0.469 ipTM=0.533 tol=9.22 2024-12-06 23:39:37,297 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.7 pTM=0.469 ipTM=0.515 tol=8.77 2024-12-06 23:40:47,191 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.6 pTM=0.468 ipTM=0.49 tol=5.61 2024-12-06 23:41:57,119 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.6 pTM=0.468 ipTM=0.491 tol=4.43 2024-12-06 23:43:07,077 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.5 pTM=0.469 ipTM=0.494 tol=7.64 2024-12-06 23:44:16,965 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.7 pTM=0.471 ipTM=0.519 tol=8.91 2024-12-06 23:45:26,880 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=49.6 pTM=0.47 ipTM=0.532 tol=6.11 2024-12-06 23:46:36,754 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.7 pTM=0.469 ipTM=0.49 tol=7.89 2024-12-06 23:47:46,609 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.4 pTM=0.469 ipTM=0.494 tol=7.68 2024-12-06 23:48:56,451 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49.4 pTM=0.468 ipTM=0.476 tol=6.65 2024-12-06 23:50:06,287 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49.4 pTM=0.469 ipTM=0.474 tol=4.41 2024-12-06 23:51:16,168 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.5 pTM=0.468 ipTM=0.462 tol=8.12 2024-12-06 23:51:16,169 alphafold2_multimer_v3_model_5_seed_000 took 2166.2s (30 recycles) 2024-12-06 23:51:17,541 reranking models by 'multimer' metric 2024-12-06 23:51:21,286 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-06 23:54:24,431 Relaxation took 186.9s 2024-12-06 23:54:24,431 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.7 pTM=0.479 ipTM=0.563 2024-12-06 23:56:44,968 Relaxation took 140.5s 2024-12-06 23:56:44,968 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.8 pTM=0.472 ipTM=0.511 2024-12-07 00:00:24,158 Relaxation took 219.2s 2024-12-07 00:00:24,159 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.4 pTM=0.471 ipTM=0.505 2024-12-07 00:03:43,180 Relaxation took 199.0s 2024-12-07 00:03:43,180 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.5 pTM=0.468 ipTM=0.462 2024-12-07 00:06:15,422 Relaxation took 152.2s 2024-12-07 00:06:15,422 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52 pTM=0.459 ipTM=0.324 2024-12-07 00:06:18,722 Done