2024-12-06 21:43:06,464 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 21:43:06,787 Running on GPU
2024-12-06 21:43:11,009 Found 6 citations for tools or databases
2024-12-06 21:43:11,009 Query 1/1: KLHL24_KLRAQ1 (length 1380)
2024-12-06 21:43:11,310 Sleeping for 8s. Reason: PENDING
2024-12-06 21:43:19,565 Sleeping for 5s. Reason: RUNNING
2024-12-06 21:43:24,823 Sleeping for 6s. Reason: RUNNING
2024-12-06 21:43:31,075 Sleeping for 5s. Reason: RUNNING
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2024-12-06 21:43:52,859 Sleeping for 6s. Reason: RUNNING
2024-12-06 21:43:59,123 Sleeping for 5s. Reason: RUNNING
2024-12-06 21:44:04,389 Sleeping for 8s. Reason: RUNNING
2024-12-06 21:44:12,662 Sleeping for 7s. Reason: RUNNING
2024-12-06 21:44:19,918 Sleeping for 6s. Reason: RUNNING
2024-12-06 21:44:26,184 Sleeping for 7s. Reason: RUNNING
2024-12-06 21:44:33,442 Sleeping for 10s. Reason: RUNNING
2024-12-06 21:44:43,702 Sleeping for 6s. Reason: RUNNING
2024-12-06 21:44:49,957 Sleeping for 10s. Reason: RUNNING
2024-12-06 21:45:00,213 Sleeping for 7s. Reason: RUNNING
2024-12-06 21:45:07,476 Sleeping for 8s. Reason: RUNNING
2024-12-06 21:45:15,744 Sleeping for 10s. Reason: RUNNING
2024-12-06 21:45:26,002 Sleeping for 10s. Reason: RUNNING
2024-12-06 21:45:36,268 Sleeping for 8s. Reason: RUNNING
2024-12-06 21:45:44,524 Sleeping for 8s. Reason: RUNNING
2024-12-06 21:45:54,585 Sleeping for 10s. Reason: PENDING
2024-12-06 21:46:04,846 Sleeping for 10s. Reason: RUNNING
2024-12-06 21:46:15,108 Sleeping for 9s. Reason: RUNNING
2024-12-06 21:46:24,369 Sleeping for 8s. Reason: RUNNING
2024-12-06 21:46:32,625 Sleeping for 8s. Reason: RUNNING
2024-12-06 21:46:40,888 Sleeping for 5s. Reason: RUNNING
2024-12-06 21:46:46,144 Sleeping for 7s. Reason: RUNNING
2024-12-06 21:46:53,397 Sleeping for 6s. Reason: RUNNING
2024-12-06 21:46:59,668 Sleeping for 9s. Reason: RUNNING
2024-12-06 21:47:08,934 Sleeping for 9s. Reason: RUNNING
2024-12-06 21:47:18,192 Sleeping for 10s. Reason: RUNNING
2024-12-06 21:47:28,451 Sleeping for 7s. Reason: RUNNING
2024-12-06 21:47:39,277 Setting max_seq=508, max_extra_seq=2048
2024-12-06 21:50:40,909 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.2 pTM=0.424 ipTM=0.159
2024-12-06 21:51:32,162 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.3 pTM=0.417 ipTM=0.199 tol=24.9
2024-12-06 21:52:23,405 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.7 pTM=0.528 ipTM=0.559 tol=19.1
2024-12-06 21:53:14,681 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.4 pTM=0.542 ipTM=0.586 tol=10.4
2024-12-06 21:54:06,020 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.9 pTM=0.537 ipTM=0.581 tol=8.02
2024-12-06 21:54:57,316 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.1 pTM=0.538 ipTM=0.564 tol=5.09
2024-12-06 21:55:48,610 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.2 pTM=0.536 ipTM=0.559 tol=2.99
2024-12-06 21:56:39,883 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.1 pTM=0.534 ipTM=0.551 tol=3.94
2024-12-06 21:57:31,141 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.2 pTM=0.539 ipTM=0.562 tol=2.4
2024-12-06 21:58:22,423 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.1 pTM=0.544 ipTM=0.583 tol=3.16
2024-12-06 21:59:13,720 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.2 pTM=0.542 ipTM=0.583 tol=3.34
2024-12-06 22:00:05,033 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.2 pTM=0.541 ipTM=0.568 tol=3.14
2024-12-06 22:00:56,314 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.1 pTM=0.536 ipTM=0.56 tol=1.82
2024-12-06 22:01:47,587 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.6 pTM=0.533 ipTM=0.557 tol=1.98
2024-12-06 22:02:38,849 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.1 pTM=0.542 ipTM=0.581 tol=2.2
2024-12-06 22:03:30,104 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.2 pTM=0.548 ipTM=0.6 tol=1.44
2024-12-06 22:04:21,366 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.1 pTM=0.549 ipTM=0.604 tol=2.05
2024-12-06 22:05:12,648 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.1 pTM=0.546 ipTM=0.594 tol=2.84
2024-12-06 22:06:03,924 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.9 pTM=0.542 ipTM=0.574 tol=2.86
2024-12-06 22:06:55,232 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.6 pTM=0.537 ipTM=0.563 tol=2.74
2024-12-06 22:07:46,535 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.1 pTM=0.544 ipTM=0.59 tol=3.06
2024-12-06 22:08:37,808 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71.9 pTM=0.543 ipTM=0.59 tol=1.5
2024-12-06 22:09:29,052 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72 pTM=0.542 ipTM=0.579 tol=2.15
2024-12-06 22:10:20,328 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.9 pTM=0.542 ipTM=0.587 tol=2.67
2024-12-06 22:11:11,600 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.9 pTM=0.541 ipTM=0.573 tol=2.12
2024-12-06 22:12:02,872 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.1 pTM=0.543 ipTM=0.586 tol=2.06
2024-12-06 22:12:54,143 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.1 pTM=0.548 ipTM=0.604 tol=1.8
2024-12-06 22:13:45,396 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=71.8 pTM=0.546 ipTM=0.602 tol=1.52
2024-12-06 22:14:36,655 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.2 pTM=0.547 ipTM=0.597 tol=1.71
2024-12-06 22:15:27,963 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.1 pTM=0.543 ipTM=0.588 tol=1.71
2024-12-06 22:16:19,243 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.4 pTM=0.554 ipTM=0.622 tol=1.3
2024-12-06 22:16:19,244 alphafold2_multimer_v3_model_1_seed_000 took 1714.7s (30 recycles)
2024-12-06 22:17:11,928 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69 pTM=0.427 ipTM=0.152
2024-12-06 22:18:03,405 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.2 pTM=0.432 ipTM=0.184 tol=19.5
2024-12-06 22:18:54,905 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70 pTM=0.43 ipTM=0.19 tol=7.98
2024-12-06 22:19:46,436 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.8 pTM=0.427 ipTM=0.177 tol=12.8
2024-12-06 22:20:37,966 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69 pTM=0.419 ipTM=0.154 tol=9.03
2024-12-06 22:21:29,523 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.8 pTM=0.419 ipTM=0.146 tol=8.57
2024-12-06 22:22:21,057 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.2 pTM=0.415 ipTM=0.149 tol=9.05
2024-12-06 22:23:12,629 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.5 pTM=0.418 ipTM=0.146 tol=10.4
2024-12-06 22:24:04,175 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.5 pTM=0.416 ipTM=0.146 tol=8.76
2024-12-06 22:24:55,668 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.6 pTM=0.417 ipTM=0.148 tol=9.89
2024-12-06 22:25:47,161 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.8 pTM=0.418 ipTM=0.149 tol=7.43
2024-12-06 22:26:38,631 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.1 pTM=0.419 ipTM=0.149 tol=4.07
2024-12-06 22:27:30,137 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.2 pTM=0.419 ipTM=0.149 tol=4.14
2024-12-06 22:28:21,613 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.9 pTM=0.416 ipTM=0.149 tol=3.14
2024-12-06 22:29:13,086 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.6 pTM=0.416 ipTM=0.146 tol=4.3
2024-12-06 22:30:04,549 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.1 pTM=0.417 ipTM=0.148 tol=2.95
2024-12-06 22:30:56,061 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.2 pTM=0.416 ipTM=0.147 tol=6.51
2024-12-06 22:31:47,538 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70 pTM=0.416 ipTM=0.148 tol=5.66
2024-12-06 22:32:39,020 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.8 pTM=0.418 ipTM=0.147 tol=4.64
2024-12-06 22:33:30,536 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.9 pTM=0.417 ipTM=0.148 tol=12.4
2024-12-06 22:34:22,026 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.4 pTM=0.417 ipTM=0.147 tol=9.23
2024-12-06 22:35:13,507 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.6 pTM=0.415 ipTM=0.148 tol=4.74
2024-12-06 22:36:04,991 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.9 pTM=0.416 ipTM=0.149 tol=4.68
2024-12-06 22:36:56,484 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.7 pTM=0.414 ipTM=0.147 tol=3.88
2024-12-06 22:37:47,976 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.5 pTM=0.414 ipTM=0.149 tol=4.22
2024-12-06 22:38:39,438 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.8 pTM=0.417 ipTM=0.152 tol=4.47
2024-12-06 22:39:30,932 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.1 pTM=0.419 ipTM=0.148 tol=3.88
2024-12-06 22:40:22,417 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.9 pTM=0.418 ipTM=0.148 tol=3.89
2024-12-06 22:41:13,884 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.8 pTM=0.417 ipTM=0.147 tol=4.8
2024-12-06 22:42:05,288 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=70.3 pTM=0.419 ipTM=0.149 tol=3.78
2024-12-06 22:42:56,720 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.6 pTM=0.42 ipTM=0.152 tol=4.79
2024-12-06 22:42:56,721 alphafold2_multimer_v3_model_2_seed_000 took 1596.3s (30 recycles)
2024-12-06 22:43:49,418 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.2 pTM=0.417 ipTM=0.149
2024-12-06 22:44:40,966 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.6 pTM=0.434 ipTM=0.149 tol=20.5
2024-12-06 22:45:32,503 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.9 pTM=0.436 ipTM=0.149 tol=14.9
2024-12-06 22:46:23,963 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.2 pTM=0.44 ipTM=0.162 tol=10.4
2024-12-06 22:47:15,446 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.1 pTM=0.438 ipTM=0.155 tol=7.95
2024-12-06 22:48:06,945 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.9 pTM=0.437 ipTM=0.153 tol=8.29
2024-12-06 22:48:58,446 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.9 pTM=0.439 ipTM=0.151 tol=5.94
2024-12-06 22:49:49,929 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.6 pTM=0.442 ipTM=0.154 tol=5.42
2024-12-06 22:50:41,423 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.5 pTM=0.444 ipTM=0.166 tol=7.11
2024-12-06 22:51:32,893 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.4 pTM=0.444 ipTM=0.162 tol=7.13
2024-12-06 22:52:24,352 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.6 pTM=0.445 ipTM=0.166 tol=4.84
2024-12-06 22:53:15,831 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.9 pTM=0.442 ipTM=0.164 tol=5.66
2024-12-06 22:54:07,294 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.2 pTM=0.443 ipTM=0.158 tol=4.58
2024-12-06 22:54:58,761 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.1 pTM=0.44 ipTM=0.154 tol=4.19
2024-12-06 22:55:50,171 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.4 pTM=0.441 ipTM=0.154 tol=7.41
2024-12-06 22:56:41,631 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.1 pTM=0.442 ipTM=0.161 tol=8.9
2024-12-06 22:57:33,082 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.8 pTM=0.442 ipTM=0.161 tol=5.65
2024-12-06 22:58:24,547 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.2 pTM=0.44 ipTM=0.156 tol=4.43
2024-12-06 22:59:16,006 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.1 pTM=0.443 ipTM=0.157 tol=4.11
2024-12-06 23:00:07,484 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.4 pTM=0.441 ipTM=0.157 tol=4.34
2024-12-06 23:00:58,944 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68 pTM=0.444 ipTM=0.16 tol=5.6
2024-12-06 23:01:50,420 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.6 pTM=0.441 ipTM=0.16 tol=4.68
2024-12-06 23:02:41,914 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.1 pTM=0.446 ipTM=0.167 tol=10.5
2024-12-06 23:03:33,333 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.6 pTM=0.47 ipTM=0.32 tol=13.8
2024-12-06 23:04:24,702 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.5 pTM=0.512 ipTM=0.45 tol=10.3
2024-12-06 23:05:16,041 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.7 pTM=0.529 ipTM=0.497 tol=14.4
2024-12-06 23:06:07,366 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.8 pTM=0.55 ipTM=0.554 tol=6.42
2024-12-06 23:06:58,696 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.6 pTM=0.531 ipTM=0.493 tol=4.97
2024-12-06 23:07:50,020 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.5 pTM=0.523 ipTM=0.474 tol=3.98
2024-12-06 23:08:41,316 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.9 pTM=0.534 ipTM=0.502 tol=4.16
2024-12-06 23:09:32,630 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.7 pTM=0.521 ipTM=0.469 tol=4.9
2024-12-06 23:09:32,632 alphafold2_multimer_v3_model_3_seed_000 took 1594.8s (30 recycles)
2024-12-06 23:10:25,333 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67 pTM=0.451 ipTM=0.253
2024-12-06 23:11:16,863 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.9 pTM=0.529 ipTM=0.49 tol=22.4
2024-12-06 23:12:08,338 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71 pTM=0.555 ipTM=0.57 tol=6.68
2024-12-06 23:12:59,831 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.9 pTM=0.533 ipTM=0.491 tol=8.75
2024-12-06 23:13:51,298 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.1 pTM=0.515 ipTM=0.437 tol=7.4
2024-12-06 23:14:42,705 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.6 pTM=0.528 ipTM=0.475 tol=5.91
2024-12-06 23:15:34,118 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.8 pTM=0.518 ipTM=0.442 tol=3.82
2024-12-06 23:16:25,499 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.5 pTM=0.507 ipTM=0.414 tol=3.3
2024-12-06 23:17:16,915 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.8 pTM=0.505 ipTM=0.405 tol=2.49
2024-12-06 23:18:08,349 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.7 pTM=0.488 ipTM=0.347 tol=2.36
2024-12-06 23:18:59,858 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.1 pTM=0.46 ipTM=0.255 tol=3.39
2024-12-06 23:19:51,421 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.2 pTM=0.447 ipTM=0.207 tol=4.05
2024-12-06 23:20:43,082 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.2 pTM=0.437 ipTM=0.174 tol=5.48
2024-12-06 23:21:34,769 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.1 pTM=0.433 ipTM=0.165 tol=5.67
2024-12-06 23:22:26,415 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.4 pTM=0.439 ipTM=0.173 tol=5.05
2024-12-06 23:23:18,089 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.2 pTM=0.438 ipTM=0.171 tol=3.38
2024-12-06 23:24:09,750 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=71.2 pTM=0.438 ipTM=0.16 tol=5.77
2024-12-06 23:25:01,407 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.9 pTM=0.437 ipTM=0.16 tol=4.69
2024-12-06 23:25:53,073 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.1 pTM=0.437 ipTM=0.157 tol=6.52
2024-12-06 23:26:44,748 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.2 pTM=0.437 ipTM=0.153 tol=5.62
2024-12-06 23:27:36,432 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.9 pTM=0.438 ipTM=0.158 tol=3.82
2024-12-06 23:28:28,116 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71 pTM=0.435 ipTM=0.158 tol=2.67
2024-12-06 23:29:19,745 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.2 pTM=0.439 ipTM=0.16 tol=4.67
2024-12-06 23:30:11,411 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.1 pTM=0.437 ipTM=0.16 tol=4.01
2024-12-06 23:31:03,011 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.4 pTM=0.441 ipTM=0.161 tol=3.86
2024-12-06 23:31:54,650 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.5 pTM=0.439 ipTM=0.165 tol=5.18
2024-12-06 23:32:46,260 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.1 pTM=0.441 ipTM=0.163 tol=4.32
2024-12-06 23:33:37,937 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.1 pTM=0.438 ipTM=0.158 tol=4.66
2024-12-06 23:34:29,553 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.4 pTM=0.442 ipTM=0.159 tol=5.75
2024-12-06 23:35:21,169 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.9 pTM=0.44 ipTM=0.154 tol=4.7
2024-12-06 23:36:12,801 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.1 pTM=0.441 ipTM=0.156 tol=2.36
2024-12-06 23:36:12,802 alphafold2_multimer_v3_model_4_seed_000 took 1599.0s (30 recycles)
2024-12-06 23:37:05,592 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.8 pTM=0.394 ipTM=0.15
2024-12-06 23:37:57,074 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.9 pTM=0.441 ipTM=0.244 tol=22.9
2024-12-06 23:38:48,492 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.8 pTM=0.442 ipTM=0.23 tol=10.3
2024-12-06 23:39:39,938 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.2 pTM=0.438 ipTM=0.205 tol=8.16
2024-12-06 23:40:31,345 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.6 pTM=0.443 ipTM=0.22 tol=6.11
2024-12-06 23:41:22,782 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69 pTM=0.443 ipTM=0.203 tol=3.52
2024-12-06 23:42:14,297 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.9 pTM=0.436 ipTM=0.173 tol=6.34
2024-12-06 23:43:05,810 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.9 pTM=0.438 ipTM=0.163 tol=5.34
2024-12-06 23:43:57,314 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.7 pTM=0.439 ipTM=0.162 tol=5.89
2024-12-06 23:44:48,847 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.7 pTM=0.441 ipTM=0.165 tol=5.8
2024-12-06 23:45:40,366 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.6 pTM=0.439 ipTM=0.164 tol=7.05
2024-12-06 23:46:31,851 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.8 pTM=0.44 ipTM=0.163 tol=3.49
2024-12-06 23:47:23,326 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.4 pTM=0.439 ipTM=0.162 tol=4.96
2024-12-06 23:48:14,810 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.5 pTM=0.436 ipTM=0.163 tol=4.31
2024-12-06 23:49:06,292 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.4 pTM=0.437 ipTM=0.166 tol=2.54
2024-12-06 23:49:57,774 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.3 pTM=0.438 ipTM=0.173 tol=2.39
2024-12-06 23:50:49,259 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.2 pTM=0.438 ipTM=0.167 tol=3.59
2024-12-06 23:51:40,733 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.4 pTM=0.439 ipTM=0.165 tol=3.06
2024-12-06 23:52:32,248 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.5 pTM=0.441 ipTM=0.164 tol=3.96
2024-12-06 23:53:23,736 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.5 pTM=0.442 ipTM=0.169 tol=4.8
2024-12-06 23:54:15,219 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.6 pTM=0.441 ipTM=0.175 tol=7.55
2024-12-06 23:55:06,645 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.8 pTM=0.451 ipTM=0.22 tol=4.84
2024-12-06 23:55:58,008 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.5 pTM=0.489 ipTM=0.38 tol=4.23
2024-12-06 23:56:49,368 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.7 pTM=0.499 ipTM=0.401 tol=4.66
2024-12-06 23:57:40,758 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.5 pTM=0.491 ipTM=0.369 tol=4.15
2024-12-06 23:58:32,146 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.4 pTM=0.482 ipTM=0.341 tol=2.86
2024-12-06 23:59:23,530 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.2 pTM=0.477 ipTM=0.314 tol=3.44
2024-12-07 00:00:14,914 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.4 pTM=0.478 ipTM=0.326 tol=2.14
2024-12-07 00:01:06,293 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.4 pTM=0.472 ipTM=0.288 tol=3.72
2024-12-07 00:01:57,671 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.2 pTM=0.476 ipTM=0.309 tol=3.45
2024-12-07 00:02:49,035 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.4 pTM=0.48 ipTM=0.325 tol=2.32
2024-12-07 00:02:49,036 alphafold2_multimer_v3_model_5_seed_000 took 1595.1s (30 recycles)
2024-12-07 00:02:50,171 reranking models by 'multimer' metric
2024-12-07 00:02:53,761 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 00:04:14,067 Relaxation took 83.9s
2024-12-07 00:04:14,067 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.4 pTM=0.554 ipTM=0.622
2024-12-07 00:06:06,325 Relaxation took 112.3s
2024-12-07 00:06:06,325 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.7 pTM=0.521 ipTM=0.469
2024-12-07 00:08:18,439 Relaxation took 132.1s
2024-12-07 00:08:18,439 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.4 pTM=0.48 ipTM=0.325
2024-12-07 00:09:45,015 Relaxation took 86.6s
2024-12-07 00:09:45,015 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.1 pTM=0.441 ipTM=0.156
2024-12-07 00:12:04,315 Relaxation took 139.3s
2024-12-07 00:12:04,315 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.6 pTM=0.42 ipTM=0.152
2024-12-07 00:12:07,177 Done