2024-12-06 21:44:20,869 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 21:44:21,182 Running on GPU
2024-12-06 21:44:23,426 Found 6 citations for tools or databases
2024-12-06 21:44:23,427 Query 1/1: KLHL2_ARHGEF7 (length 1396)
2024-12-06 21:44:23,708 Sleeping for 8s. Reason: PENDING
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2024-12-06 21:49:32,333 Sleeping for 8s. Reason: PENDING
2024-12-06 21:49:40,598 Sleeping for 5s. Reason: RUNNING
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2024-12-06 21:51:06,222 Sleeping for 10s. Reason: RUNNING
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2024-12-06 21:51:30,013 Sleeping for 7s. Reason: RUNNING
2024-12-06 21:51:37,269 Sleeping for 5s. Reason: RUNNING
2024-12-06 21:51:42,520 Sleeping for 9s. Reason: RUNNING
2024-12-06 21:51:51,781 Sleeping for 8s. Reason: RUNNING
2024-12-06 21:52:00,041 Sleeping for 8s. Reason: RUNNING
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2024-12-06 21:52:13,564 Sleeping for 8s. Reason: RUNNING
2024-12-06 21:52:27,345 Setting max_seq=508, max_extra_seq=2048
2024-12-06 21:55:28,845 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.3 pTM=0.348 ipTM=0.258
2024-12-06 21:56:22,297 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.1 pTM=0.341 ipTM=0.195 tol=11.6
2024-12-06 21:57:15,877 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.1 pTM=0.34 ipTM=0.243 tol=7.1
2024-12-06 21:58:09,516 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.2 pTM=0.346 ipTM=0.289 tol=6
2024-12-06 21:59:03,246 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.6 pTM=0.342 ipTM=0.292 tol=7.32
2024-12-06 21:59:56,981 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.4 pTM=0.344 ipTM=0.252 tol=4.27
2024-12-06 22:00:50,686 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.5 pTM=0.34 ipTM=0.243 tol=3.25
2024-12-06 22:01:44,435 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.6 pTM=0.341 ipTM=0.256 tol=2.85
2024-12-06 22:02:38,177 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.6 pTM=0.341 ipTM=0.267 tol=2.43
2024-12-06 22:03:31,883 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.8 pTM=0.341 ipTM=0.248 tol=2.54
2024-12-06 22:04:25,613 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.5 pTM=0.34 ipTM=0.245 tol=1.92
2024-12-06 22:05:19,333 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.6 pTM=0.34 ipTM=0.233 tol=2.46
2024-12-06 22:06:13,071 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.8 pTM=0.341 ipTM=0.241 tol=2.93
2024-12-06 22:07:06,774 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.5 pTM=0.341 ipTM=0.255 tol=2.55
2024-12-06 22:08:00,444 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.8 pTM=0.341 ipTM=0.238 tol=3.47
2024-12-06 22:08:54,170 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.3 pTM=0.339 ipTM=0.237 tol=4.05
2024-12-06 22:09:47,892 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.8 pTM=0.341 ipTM=0.24 tol=3.72
2024-12-06 22:10:41,631 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.8 pTM=0.338 ipTM=0.24 tol=3.4
2024-12-06 22:11:35,311 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.5 pTM=0.341 ipTM=0.252 tol=2.83
2024-12-06 22:12:28,991 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.3 pTM=0.338 ipTM=0.258 tol=3.05
2024-12-06 22:13:22,661 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.5 pTM=0.34 ipTM=0.266 tol=2.49
2024-12-06 22:14:16,344 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.3 pTM=0.338 ipTM=0.261 tol=3.24
2024-12-06 22:15:10,058 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.2 pTM=0.341 ipTM=0.253 tol=3.24
2024-12-06 22:16:03,800 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.5 pTM=0.338 ipTM=0.26 tol=3.42
2024-12-06 22:16:57,530 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.6 pTM=0.341 ipTM=0.258 tol=2.21
2024-12-06 22:17:51,261 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.4 pTM=0.338 ipTM=0.267 tol=2.98
2024-12-06 22:18:44,949 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.6 pTM=0.34 ipTM=0.265 tol=3.5
2024-12-06 22:19:38,610 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.4 pTM=0.338 ipTM=0.271 tol=1.86
2024-12-06 22:20:32,218 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.6 pTM=0.341 ipTM=0.267 tol=2.8
2024-12-06 22:21:25,811 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.4 pTM=0.341 ipTM=0.264 tol=2.74
2024-12-06 22:22:19,437 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.4 pTM=0.341 ipTM=0.257 tol=2.81
2024-12-06 22:22:19,438 alphafold2_multimer_v3_model_1_seed_000 took 1788.6s (30 recycles)
2024-12-06 22:23:14,358 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68 pTM=0.348 ipTM=0.256
2024-12-06 22:24:08,146 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.6 pTM=0.345 ipTM=0.204 tol=12.3
2024-12-06 22:25:01,908 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.7 pTM=0.347 ipTM=0.265 tol=6.36
2024-12-06 22:25:55,686 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.1 pTM=0.355 ipTM=0.241 tol=9.44
2024-12-06 22:26:49,543 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.2 pTM=0.347 ipTM=0.236 tol=8.73
2024-12-06 22:27:43,364 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.2 pTM=0.351 ipTM=0.236 tol=4.36
2024-12-06 22:28:37,216 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.2 pTM=0.346 ipTM=0.241 tol=4.89
2024-12-06 22:29:31,013 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.3 pTM=0.347 ipTM=0.247 tol=3.1
2024-12-06 22:30:24,737 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.4 pTM=0.349 ipTM=0.279 tol=3.58
2024-12-06 22:31:18,471 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.4 pTM=0.347 ipTM=0.275 tol=2.79
2024-12-06 22:32:12,235 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.5 pTM=0.347 ipTM=0.252 tol=3.3
2024-12-06 22:33:06,009 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.6 pTM=0.347 ipTM=0.247 tol=3.15
2024-12-06 22:33:59,789 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.5 pTM=0.346 ipTM=0.26 tol=2.76
2024-12-06 22:34:53,598 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.4 pTM=0.346 ipTM=0.257 tol=3.17
2024-12-06 22:35:47,439 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.5 pTM=0.346 ipTM=0.232 tol=4.81
2024-12-06 22:36:41,282 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.4 pTM=0.349 ipTM=0.232 tol=8.12
2024-12-06 22:37:35,147 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.3 pTM=0.345 ipTM=0.238 tol=5.21
2024-12-06 22:38:29,048 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.5 pTM=0.346 ipTM=0.249 tol=3.73
2024-12-06 22:39:22,897 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.2 pTM=0.346 ipTM=0.248 tol=3.11
2024-12-06 22:40:16,788 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.3 pTM=0.345 ipTM=0.245 tol=4.85
2024-12-06 22:41:10,653 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.4 pTM=0.345 ipTM=0.242 tol=4.3
2024-12-06 22:42:04,514 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.4 pTM=0.344 ipTM=0.227 tol=3.26
2024-12-06 22:42:58,374 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.2 pTM=0.344 ipTM=0.205 tol=3.93
2024-12-06 22:43:52,292 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.2 pTM=0.344 ipTM=0.194 tol=4.19
2024-12-06 22:44:46,146 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.2 pTM=0.344 ipTM=0.2 tol=3.19
2024-12-06 22:45:40,021 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.2 pTM=0.344 ipTM=0.2 tol=3.39
2024-12-06 22:46:33,936 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.2 pTM=0.345 ipTM=0.191 tol=3.21
2024-12-06 22:47:27,858 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.1 pTM=0.343 ipTM=0.199 tol=3.03
2024-12-06 22:48:21,742 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69 pTM=0.343 ipTM=0.215 tol=3.08
2024-12-06 22:49:15,657 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69 pTM=0.345 ipTM=0.206 tol=5.56
2024-12-06 22:50:09,525 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69 pTM=0.345 ipTM=0.214 tol=5.5
2024-12-06 22:50:09,526 alphafold2_multimer_v3_model_2_seed_000 took 1668.9s (30 recycles)
2024-12-06 22:51:04,529 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.7 pTM=0.374 ipTM=0.223
2024-12-06 22:51:58,439 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.3 pTM=0.361 ipTM=0.283 tol=29.6
2024-12-06 22:52:52,240 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.2 pTM=0.357 ipTM=0.245 tol=9.23
2024-12-06 22:53:46,030 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.4 pTM=0.403 ipTM=0.363 tol=8.26
2024-12-06 22:54:39,865 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.4 pTM=0.355 ipTM=0.299 tol=5.36
2024-12-06 22:55:33,628 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.4 pTM=0.368 ipTM=0.289 tol=6.01
2024-12-06 22:56:27,465 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.1 pTM=0.348 ipTM=0.289 tol=5.38
2024-12-06 22:57:21,251 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.2 pTM=0.36 ipTM=0.295 tol=4.12
2024-12-06 22:58:15,026 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.8 pTM=0.351 ipTM=0.298 tol=4.02
2024-12-06 22:59:08,784 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68 pTM=0.362 ipTM=0.292 tol=3.38
2024-12-06 23:00:02,528 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.8 pTM=0.348 ipTM=0.29 tol=4.45
2024-12-06 23:00:56,239 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.8 pTM=0.355 ipTM=0.287 tol=2.72
2024-12-06 23:01:49,973 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.8 pTM=0.352 ipTM=0.29 tol=2.76
2024-12-06 23:02:43,756 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.5 pTM=0.355 ipTM=0.292 tol=2.59
2024-12-06 23:03:37,587 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.4 pTM=0.348 ipTM=0.289 tol=2.58
2024-12-06 23:04:31,378 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.5 pTM=0.356 ipTM=0.274 tol=3.95
2024-12-06 23:05:25,126 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.5 pTM=0.349 ipTM=0.28 tol=2.59
2024-12-06 23:06:18,858 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.4 pTM=0.35 ipTM=0.297 tol=4.24
2024-12-06 23:07:12,548 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.4 pTM=0.36 ipTM=0.342 tol=6.15
2024-12-06 23:08:06,275 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.1 pTM=0.349 ipTM=0.247 tol=13.8
2024-12-06 23:09:00,064 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.9 pTM=0.354 ipTM=0.267 tol=10.7
2024-12-06 23:09:53,918 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.8 pTM=0.351 ipTM=0.303 tol=7.04
2024-12-06 23:10:47,790 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.6 pTM=0.347 ipTM=0.31 tol=6.71
2024-12-06 23:11:41,667 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.9 pTM=0.352 ipTM=0.299 tol=4.39
2024-12-06 23:12:35,561 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.8 pTM=0.35 ipTM=0.272 tol=4
2024-12-06 23:13:29,447 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.8 pTM=0.355 ipTM=0.276 tol=5.66
2024-12-06 23:14:23,361 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.5 pTM=0.348 ipTM=0.275 tol=8.82
2024-12-06 23:15:17,246 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.7 pTM=0.353 ipTM=0.275 tol=7.43
2024-12-06 23:16:11,186 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.5 pTM=0.347 ipTM=0.273 tol=6.96
2024-12-06 23:17:05,045 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.9 pTM=0.357 ipTM=0.282 tol=5.5
2024-12-06 23:17:58,923 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.5 pTM=0.348 ipTM=0.306 tol=4.14
2024-12-06 23:17:58,925 alphafold2_multimer_v3_model_3_seed_000 took 1668.2s (30 recycles)
2024-12-06 23:18:53,974 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.8 pTM=0.345 ipTM=0.227
2024-12-06 23:19:47,802 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.8 pTM=0.363 ipTM=0.236 tol=19.1
2024-12-06 23:20:41,603 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67 pTM=0.353 ipTM=0.261 tol=12.6
2024-12-06 23:21:35,491 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.6 pTM=0.35 ipTM=0.244 tol=10.3
2024-12-06 23:22:29,332 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.2 pTM=0.349 ipTM=0.207 tol=8.4
2024-12-06 23:23:23,218 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.1 pTM=0.346 ipTM=0.212 tol=10.5
2024-12-06 23:24:17,123 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67 pTM=0.341 ipTM=0.211 tol=6.79
2024-12-06 23:25:11,074 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.3 pTM=0.347 ipTM=0.208 tol=6.39
2024-12-06 23:26:05,020 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67 pTM=0.342 ipTM=0.202 tol=7.37
2024-12-06 23:26:58,928 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.3 pTM=0.346 ipTM=0.208 tol=7.68
2024-12-06 23:27:52,827 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.2 pTM=0.341 ipTM=0.204 tol=7.9
2024-12-06 23:28:46,774 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.3 pTM=0.349 ipTM=0.201 tol=6.49
2024-12-06 23:29:40,711 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.1 pTM=0.342 ipTM=0.189 tol=6.74
2024-12-06 23:30:34,653 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67 pTM=0.351 ipTM=0.203 tol=10.8
2024-12-06 23:31:28,568 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.9 pTM=0.344 ipTM=0.203 tol=8.12
2024-12-06 23:32:22,448 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.1 pTM=0.349 ipTM=0.201 tol=8.16
2024-12-06 23:33:16,320 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.8 pTM=0.34 ipTM=0.208 tol=7.87
2024-12-06 23:34:10,285 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67.2 pTM=0.346 ipTM=0.241 tol=6.14
2024-12-06 23:35:04,185 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.9 pTM=0.344 ipTM=0.263 tol=8.15
2024-12-06 23:35:58,105 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.9 pTM=0.344 ipTM=0.216 tol=6.7
2024-12-06 23:36:52,070 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.9 pTM=0.34 ipTM=0.205 tol=5.76
2024-12-06 23:37:46,012 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.1 pTM=0.344 ipTM=0.2 tol=5.77
2024-12-06 23:38:39,917 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67 pTM=0.34 ipTM=0.217 tol=6.15
2024-12-06 23:39:33,843 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.3 pTM=0.342 ipTM=0.21 tol=6.44
2024-12-06 23:40:27,764 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.9 pTM=0.343 ipTM=0.23 tol=8.65
2024-12-06 23:41:21,697 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.3 pTM=0.345 ipTM=0.239 tol=7.93
2024-12-06 23:42:15,550 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.1 pTM=0.342 ipTM=0.234 tol=4.37
2024-12-06 23:43:09,386 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.1 pTM=0.344 ipTM=0.194 tol=9.37
2024-12-06 23:44:03,259 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.6 pTM=0.341 ipTM=0.212 tol=7.92
2024-12-06 23:44:57,123 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.9 pTM=0.345 ipTM=0.22 tol=6.17
2024-12-06 23:45:50,986 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.9 pTM=0.34 ipTM=0.215 tol=8.18
2024-12-06 23:45:50,987 alphafold2_multimer_v3_model_4_seed_000 took 1670.9s (30 recycles)
2024-12-06 23:46:46,054 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.7 pTM=0.35 ipTM=0.205
2024-12-06 23:47:40,050 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.8 pTM=0.353 ipTM=0.279 tol=11.6
2024-12-06 23:48:34,092 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.4 pTM=0.351 ipTM=0.337 tol=5.21
2024-12-06 23:49:28,097 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.4 pTM=0.347 ipTM=0.314 tol=4.9
2024-12-06 23:50:22,090 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.5 pTM=0.348 ipTM=0.308 tol=4.17
2024-12-06 23:51:16,036 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.4 pTM=0.348 ipTM=0.311 tol=4.58
2024-12-06 23:52:09,988 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.4 pTM=0.347 ipTM=0.298 tol=4.89
2024-12-06 23:53:03,904 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.4 pTM=0.347 ipTM=0.321 tol=5.44
2024-12-06 23:53:57,802 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.4 pTM=0.35 ipTM=0.315 tol=3.54
2024-12-06 23:54:51,724 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.4 pTM=0.351 ipTM=0.313 tol=2.98
2024-12-06 23:55:45,666 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.4 pTM=0.35 ipTM=0.317 tol=2.42
2024-12-06 23:56:39,598 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.5 pTM=0.351 ipTM=0.319 tol=2.35
2024-12-06 23:57:33,506 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.2 pTM=0.349 ipTM=0.331 tol=2.14
2024-12-06 23:58:27,384 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.2 pTM=0.348 ipTM=0.33 tol=4.32
2024-12-06 23:59:21,312 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.4 pTM=0.349 ipTM=0.321 tol=4.03
2024-12-07 00:00:15,208 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.4 pTM=0.348 ipTM=0.331 tol=2.62
2024-12-07 00:01:09,070 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.4 pTM=0.349 ipTM=0.317 tol=2.83
2024-12-07 00:02:02,909 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.5 pTM=0.349 ipTM=0.318 tol=4.14
2024-12-07 00:02:56,715 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.4 pTM=0.35 ipTM=0.32 tol=6.57
2024-12-07 00:03:50,501 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.2 pTM=0.348 ipTM=0.306 tol=4.28
2024-12-07 00:04:44,382 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.3 pTM=0.352 ipTM=0.316 tol=5.66
2024-12-07 00:05:38,273 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.5 pTM=0.351 ipTM=0.32 tol=3.35
2024-12-07 00:06:32,161 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.2 pTM=0.351 ipTM=0.318 tol=3.16
2024-12-07 00:07:26,041 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.4 pTM=0.351 ipTM=0.326 tol=2.67
2024-12-07 00:08:19,929 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.2 pTM=0.348 ipTM=0.306 tol=3.07
2024-12-07 00:09:13,894 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.5 pTM=0.351 ipTM=0.306 tol=3.45
2024-12-07 00:10:07,829 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.4 pTM=0.347 ipTM=0.306 tol=3.48
2024-12-07 00:11:01,681 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.3 pTM=0.351 ipTM=0.307 tol=6.31
2024-12-07 00:11:55,521 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.3 pTM=0.349 ipTM=0.295 tol=3.68
2024-12-07 00:12:49,381 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.2 pTM=0.349 ipTM=0.302 tol=3.2
2024-12-07 00:13:43,289 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.4 pTM=0.35 ipTM=0.293 tol=2.08
2024-12-07 00:13:43,291 alphafold2_multimer_v3_model_5_seed_000 took 1671.1s (30 recycles)
2024-12-07 00:13:44,445 reranking models by 'multimer' metric
2024-12-07 00:13:45,893 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 00:16:27,036 Relaxation took 162.6s
2024-12-07 00:16:27,036 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.5 pTM=0.348 ipTM=0.306
2024-12-07 00:19:40,980 Relaxation took 193.9s
2024-12-07 00:19:40,980 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.4 pTM=0.35 ipTM=0.293
2024-12-07 00:22:27,599 Relaxation took 166.6s
2024-12-07 00:22:27,600 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.4 pTM=0.341 ipTM=0.257
2024-12-07 00:25:24,415 Relaxation took 176.8s
2024-12-07 00:25:24,416 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69 pTM=0.345 ipTM=0.214
2024-12-07 00:27:42,639 Relaxation took 138.2s
2024-12-07 00:27:42,640 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.9 pTM=0.34 ipTM=0.215
2024-12-07 00:27:45,706 Done